Citrus Sinensis ID: 003402
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 823 | 2.2.26 [Sep-21-2011] | |||||||
| O81905 | 850 | Receptor-like serine/thre | yes | no | 0.940 | 0.910 | 0.423 | 1e-180 | |
| Q9S972 | 847 | Receptor-like serine/thre | no | no | 0.933 | 0.906 | 0.417 | 1e-176 | |
| Q39086 | 843 | Receptor-like serine/thre | no | no | 0.933 | 0.911 | 0.414 | 1e-175 | |
| Q9ZT07 | 833 | G-type lectin S-receptor- | no | no | 0.919 | 0.908 | 0.422 | 1e-172 | |
| O81832 | 783 | G-type lectin S-receptor- | no | no | 0.891 | 0.937 | 0.408 | 1e-169 | |
| Q09092 | 857 | Putative serine/threonine | N/A | no | 0.939 | 0.901 | 0.409 | 1e-169 | |
| O81906 | 849 | G-type lectin S-receptor- | no | no | 0.953 | 0.924 | 0.399 | 1e-167 | |
| Q9LPZ3 | 845 | G-type lectin S-receptor- | no | no | 0.924 | 0.900 | 0.401 | 1e-166 | |
| P0DH86 | 853 | G-type lectin S-receptor- | no | no | 0.933 | 0.900 | 0.404 | 1e-158 | |
| Q9SY89 | 842 | Putative G-type lectin S- | no | no | 0.916 | 0.895 | 0.381 | 1e-155 |
| >sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1 | Back alignment and function desciption |
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Score = 630 bits (1626), Expect = e-180, Method: Compositional matrix adjust.
Identities = 355/839 (42%), Positives = 510/839 (60%), Gaps = 65/839 (7%)
Query: 37 FSLAADTLTPTT--LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVA 93
+S++A+TL+ + I T+VSP FELGFF PG Y+GIWY+ I T VWVA
Sbjct: 25 YSISANTLSASESLTISSNNTIVSPGNVFELGFFKPGLDSRWYLGIWYKAISKRTYVWVA 84
Query: 94 NRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSR-EVKNP-VAQLLDNGNLVIRDN 151
NR++P+ G L +S+ NLV+L+QS+ +WS+N++ +V++P VA+LLDNGN V+RD+
Sbjct: 85 NRDTPLSSSIGTLKISD-SNLVVLDQSDTPVWSTNLTGGDVRSPLVAELLDNGNFVLRDS 143
Query: 152 SGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIH 211
S + + LWQSFD+PTDT+L MKLGWD +TG R+ SWKS DDPS G+F+ +L+
Sbjct: 144 KNS-APDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETE 202
Query: 212 VLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPI-VVQNKDEVYYMYESYSSPII 270
P++ ++N ++ +GPWNG+ F P F + +K+EV Y + S +
Sbjct: 203 GFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVFNFTTSKEEVTYSFRITKSDVY 262
Query: 271 MILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQTSHCECLEGF 329
L ++ G +QR W E + W F+ AP C Y +CG C + + C C++GF
Sbjct: 263 SRLSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNCIKGF 322
Query: 330 KFKSQQ-------NQTCVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAEC 382
K ++ Q + CVR C GD F +L +KLPD S++ + +KECE +C
Sbjct: 323 KPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTTASVDRGIGVKECEQKC 382
Query: 383 LKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQGNKKLLWI 442
L++C+C A+AN+ + GSGC+ W G+L D++ + G +Y+R+ A++ +K+
Sbjct: 383 LRDCNCTAFANTDIRGSGSGCVTWTGELFDIR--NYAKGGQDLYVRLAATDLEDKRNRSA 440
Query: 443 IVI---LVLPLVILPCVYIARQWSRKRKEN---ETKNLD---TNQDLLAFDVNMGITTRT 493
+I + + +++L I W RK+K + ET +D ++DLL +V I++R
Sbjct: 441 KIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIVDHQLRSRDLLMNEVV--ISSRR 498
Query: 494 NEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVA 553
+ E + D D LPL F V AT NFS +KLG+GGFG VYKG+LL+GQE+A
Sbjct: 499 HISRENNTD------DLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMA 552
Query: 554 VKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF 613
VKRLS S QG EFKNE+ LIA+LQH NLVRLL CC++ GEK+LIYEY+ N SLD LF
Sbjct: 553 VKRLSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLF 612
Query: 614 DPTKKHLLGWQLRVRIIDGIAQ-------------------------DQHMNPKISDFGM 648
D ++ L WQ+R II+GIA+ D++M PKISDFGM
Sbjct: 613 DKSRNSKLNWQMRFDIINGIARGLLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGM 672
Query: 649 ARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYN 708
AR+FG DE + NT+++VGTYGYMSPEYA++G+FS+KSDVFSFGVL+LEI+SSK+N G YN
Sbjct: 673 ARIFGRDETEANTRKVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYN 732
Query: 709 TD-SFNLLGHAWSLCKNDRAHELMDPVLQNEVSL---PMLVRYINVALLCVQENAEDRPT 764
+D NLLG W K + E++DP++ + S ++R I + LLCVQE AEDRPT
Sbjct: 733 SDRDLNLLGCVWRNWKEGKGLEIIDPIITDSSSTFRQHEILRCIQIGLLCVQERAEDRPT 792
Query: 765 MSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSLIYPR 823
MS V+ M+ +E +P PK P + + SS+S E +VN +TVS++ R
Sbjct: 793 MSLVILMLGSESTTIPQPKAPGY-CLERSLLDTDSSSSKQRDDESWTVNQITVSVLDAR 850
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Involved in the regulation of cellular expansion and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 619 bits (1597), Expect = e-176, Method: Compositional matrix adjust.
Identities = 352/844 (41%), Positives = 505/844 (59%), Gaps = 76/844 (9%)
Query: 37 FSLAADTLTPTT--LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVA 93
FS+ A + T I +T++SPSQ FELGFF+P S Y+GIWY+ IP T VWVA
Sbjct: 23 FSVYASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVA 82
Query: 94 NRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSR-EVKNPVA-QLLDNGNLVIRDN 151
NR++P+ NG L +S+ NLV+ +QS+ +WS+N++ +V++PVA +LLD GN V+RD
Sbjct: 83 NRDNPLSSSNGTLKISD-NNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRD- 140
Query: 152 SGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTG-LERYQTSWKSADDPSPGNFTHRLDI 210
S +N +LWQSFD+PTDT+L MK+GWD ++G R SWK+ DDPS G+F+ +L
Sbjct: 141 SKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRT 200
Query: 211 HVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPI------VVQNKDEVYYMYES 264
P+ +YN + +GPW G F S P +P+ +N +V Y Y
Sbjct: 201 SGFPEFYIYNKESITYRSGPWLGNRFSSVPG-----MKPVDYIDNSFTENNQQVVYSYRV 255
Query: 265 YSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQTSHC 323
+ I IL ++ G +QRL W E + W+ + +P C +Y +CG C + + C
Sbjct: 256 NKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPIC 315
Query: 324 ECLEGFKFKSQQNQT------CVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKE 377
C++GF+ ++Q CVR C D F +L ++LPD + S+++ + LKE
Sbjct: 316 NCIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKE 375
Query: 378 CEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQGNK 437
CE CLK C+C A+AN+ + +GGSGC++W G L D++ + G +Y+RV A + +K
Sbjct: 376 CEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIR--NYAKGGQDLYVRVAAGDLEDK 433
Query: 438 KLLWIIVI---LVLPLVILPCVYIARQWSRKRKENET-----KNLDTNQDLLAFDVNMGI 489
++ +I + + +++L I W RK+K + T +L +QD L ++
Sbjct: 434 RIKSKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKAS 493
Query: 490 TTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNG 549
+ T++ ++K+ LPL + ++ AT NFS +KLG+GGFG VYKG LL+G
Sbjct: 494 RSYTSK--------ENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDG 545
Query: 550 QEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLD 609
+E+AVKRLS S QG EF NE+ LIAKLQH NLVRLLGCC+++GEK+LIYEY+ N SLD
Sbjct: 546 KEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLD 605
Query: 610 VFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQHMNPKIS 644
LFD T+ L WQ R II+GIA+ D++M PKIS
Sbjct: 606 SHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKIS 665
Query: 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT 704
DFGMAR+FG +E + NT+R+VGTYGYMSPEYA++G+FS+KSDVFSFGVL+LEI+S K+N
Sbjct: 666 DFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNK 725
Query: 705 GVYNTD-SFNLLGHAWSLCKNDRAHELMDPV----LQNEVSLPMLVRYINVALLCVQENA 759
G YN++ NLLG W K + E++DP+ L +E ++R I + LLCVQE A
Sbjct: 726 GFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERA 785
Query: 760 EDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSL 819
EDRP MS V+ M+ +E +P PK P F + SS+ST E C+VN VT+S+
Sbjct: 786 EDRPVMSSVMVMLGSETTAIPQPKRPGFCV-GRSSLEVDSSSSTQRDDE-CTVNQVTLSV 843
Query: 820 IYPR 823
I R
Sbjct: 844 IDAR 847
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Involved in the regulation of cellular expansion and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 348/840 (41%), Positives = 508/840 (60%), Gaps = 72/840 (8%)
Query: 37 FSLAADTLTPTT--LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVA 93
FS++ +TL+ T I +T++SPSQ FELGFF+P S Y+GIWY+ IP T VWVA
Sbjct: 23 FSVSPNTLSATESLTISSNKTIISPSQIFELGFFNPASSSRWYLGIWYKIIPIRTYVWVA 82
Query: 94 NRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVS-REVKNPV-AQLLDNGNLVIRDN 151
NR++P+ NG L +S NLV+ +QS+ +WS+N++ +V++PV A+LLDNGN ++RD
Sbjct: 83 NRDNPLSSSNGTLKISG-NNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDNGNFLLRD- 140
Query: 152 SGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIH 211
S LWQSFD+PTDT+L MKLGWD +TG R SWK+ DDPS G F+ +L+
Sbjct: 141 ----SNNRLLWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLETS 196
Query: 212 VLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPI-VVQNKDEVYYMYESYSSPII 270
P+ + + + +GPWNG+ F S P + +K+EV Y Y + +
Sbjct: 197 EFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTASKEEVTYSYRINKTNLY 256
Query: 271 MILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQTSHCECLEGF 329
L +N G +QRL W E + W+ + +P C +Y CG C + +C C++GF
Sbjct: 257 SRLYLNSAGLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNSLPNCYCIKGF 316
Query: 330 KFKSQQ-------NQTCVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAEC 382
K ++Q + C+R C D F +L +KLPD ++ + LK C+ C
Sbjct: 317 KPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDREIGLKVCKERC 376
Query: 383 LKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQGNKKLLWI 442
L++C+C A+AN+ + +GGSGC++W +++D++ + G +Y+R+ A+E +K++
Sbjct: 377 LEDCNCTAFANADIRNGGSGCVIWTREILDMR--NYAKGGQDLYVRLAAAELEDKRIKNE 434
Query: 443 IVI---LVLPLVILPCVYIARQWSRKRKEN---ETKNLDT--NQDLLAFDVNMGITTRTN 494
+I + + +++L I W RK+K + +T N+D +QD L DV + T+
Sbjct: 435 KIIGSSIGVSILLLLSFVIFHFWKRKQKRSITIQTPNVDQVRSQDSLINDVVVSRRGYTS 494
Query: 495 EFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAV 554
+ + KS+ LPL ++ AT NFS +KLG+GGFG VYKGRLL+G+E+AV
Sbjct: 495 K--------EKKSEYLELPLLELEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEIAV 546
Query: 555 KRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD 614
KRLS S QG EF NE+ LIAKLQH NLVRLLGCC+++GEK+LIYEY+ N SLD LFD
Sbjct: 547 KRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFD 606
Query: 615 PTKKHLLGWQLRVRIIDGIAQ-------------------------DQHMNPKISDFGMA 649
T+ L WQ R II+GIA+ D++M PKISDFGMA
Sbjct: 607 QTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMA 666
Query: 650 RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNT 709
R+FG +E + NT+R+VGTYGYMSPEYA++G+FS+KSDVFSFGVL+LEI+S K+N G YN+
Sbjct: 667 RIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNS 726
Query: 710 D-SFNLLGHAWSLCKNDRAHELMDPV----LQNEVSLPMLVRYINVALLCVQENAEDRPT 764
+ NLLG W K E++DP+ L ++ ++R I + LLCVQE AEDRP
Sbjct: 727 NRDLNLLGFVWRHWKEGNELEIVDPINIDSLSSKFPTHEILRCIQIGLLCVQERAEDRPV 786
Query: 765 MSDVVSMINNELFNLPSPKEPPFTTFTKGKN-MKYSSNSTSGTSEFCSVNDVTVSLIYPR 823
MS V+ M+ +E +P PK P F G++ ++ S+S++ + C+VN +T+S+I R
Sbjct: 787 MSSVMVMLGSETTAIPQPKRPGFCI---GRSPLEADSSSSTQRDDECTVNQITLSVIDAR 843
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Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 605 bits (1559), Expect = e-172, Method: Compositional matrix adjust.
Identities = 357/845 (42%), Positives = 481/845 (56%), Gaps = 88/845 (10%)
Query: 39 LAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVANRNS 97
++ DT+ +RDGE ++S +RF GFFS G S+ RYVGIWY QI T+VWVANR+
Sbjct: 17 ISVDTIMRRQSLRDGEVILSAGKRFAFGFFSLGDSELRYVGIWYAQISQQTIVWVANRDH 76
Query: 98 PIVDKNGVLTVSNRGNLVLLNQSNGT--IWSSNVSREVKNP--VAQLLDNGNLVIRDNSG 153
PI D +G++ SNRGNL + N T IWS+NVS + P VA L D GNLV+ D
Sbjct: 77 PINDTSGMVKFSNRGNLSVYASDNETELIWSTNVSDSMLEPTLVATLSDLGNLVLFDPVT 136
Query: 154 SNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVL 213
S W+SFD+PTDT L M+LG+ + GL+R TSWKS DP G+ R++
Sbjct: 137 GRS----FWESFDHPTDTFLPFMRLGFTRKDGLDRSLTSWKSHGDPGSGDLILRMERRGF 192
Query: 214 PQVCVYNGSAKYTCTGPWNGVAFGSAPSNTT-FIFQPIVVQNKDEVYYMYESYSSPIIMI 272
PQ+ +Y G + G W G + P +IF V N+DEV + Y + +I
Sbjct: 193 PQLILYKGVTPWWRMGSWTGHRWSGVPEMPIGYIFNNSFVNNEDEVSFTYGVTDASVITR 252
Query: 273 LRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSV--DQTSHCECLEGF 329
VN G + R W W F++ P C +Y CGPN C +T C CL GF
Sbjct: 253 TMVNETGTMHRFTWIARDKRWNDFWSVPKEQCDNYAHCGPNGYCDSPSSKTFECTCLPGF 312
Query: 330 K-------FKSQQNQTCVRS-HSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAE 381
+ F + C + +S C D F KL +K+PD D S++ ++ LKEC+
Sbjct: 313 EPKFPRHWFLRDSSGGCTKKKRASICSEKDGFVKLKRMKIPDTSDASVDMNITLKECKQR 372
Query: 382 CLKNCSCRAYANS--KVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASE------ 433
CLKNCSC AYA++ + G GCL W G ++D + N +G YIRV E
Sbjct: 373 CLKNCSCVAYASAYHESKRGAIGCLKWHGGMLDARTYLN--SGQDFYIRVDKEELARWNR 430
Query: 434 ---QGNKKLLWIIVILV----LPLVILPCVYIARQWSRKRKENETKNLDTNQDLLAFDVN 486
G +++L I++ L+ L VIL CV R RK N ++ N + FD
Sbjct: 431 NGLSGKRRVLLILISLIAAVMLLTVILFCVVRER-----RKSNRHRSSSANFAPVPFD-- 483
Query: 487 MGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRL 546
F E+ +DK+++ LPLF ++ AAT NFS Q+KLG GGFGPVYKG L
Sbjct: 484 ---------FDESFRFEQDKARNRELPLFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVL 534
Query: 547 LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606
N E+AVKRLS SGQG++EFKNE+ LI+KLQHRNLVR+LGCC+E EK+L+YEY+ NK
Sbjct: 535 QNRMEIAVKRLSRNSGQGMEEFKNEVKLISKLQHRNLVRILGCCVELEEKMLVYEYLPNK 594
Query: 607 SLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQHMNP 641
SLD F+F ++ L W R+ I+ GIA+ D M P
Sbjct: 595 SLDYFIFHEEQRAELDWPKRMEIVRGIARGILYLHQDSRLRIIHRDLKASNILLDSEMIP 654
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
KISDFGMAR+FGG++++G T R+VGT+GYM+PEYA+EG FS+KSDV+SFGVLMLEI++ K
Sbjct: 655 KISDFGMARIFGGNQMEGCTSRVVGTFGYMAPEYAMEGQFSIKSDVYSFGVLMLEIITGK 714
Query: 702 KNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV-SLPMLVRYINVALLCVQENAE 760
KN+ ++ +S NL+GH W L +N A E++D ++ E +++ I + LLCVQENA
Sbjct: 715 KNSA-FHEESSNLVGHIWDLWENGEATEIIDNLMDQETYDEREVMKCIQIGLLCVQENAS 773
Query: 761 DRPTMSDVVSMINNELFNLPSPKEPPFTTFTK--GKNMKYSSNSTSGTSEFCSVNDVTVS 818
DR MS VV M+ + NLP+PK P FT+ + G+N T SVNDVT S
Sbjct: 774 DRVDMSSVVIMLGHNATNLPNPKHPAFTSARRRGGENGACLKGQTG-----ISVNDVTFS 828
Query: 819 LIYPR 823
I R
Sbjct: 829 DIQGR 833
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4 | Back alignment and function description |
|---|
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 345/845 (40%), Positives = 490/845 (57%), Gaps = 111/845 (13%)
Query: 24 NIFSSLI--FYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIW 81
N+ LI + I + A D L ++DG+T+VS FE+GFFSPG S+NRY+GIW
Sbjct: 5 NVLHLLIISLFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIW 64
Query: 82 YQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNV-----SREVKN 135
Y++I TVVWVANR+SP+ D +G L VS G+L L N N IWSS+ ++N
Sbjct: 65 YKKISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRN 124
Query: 136 PVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKS 195
P+ Q+LD GNLV+R NSG + + Y+WQS DYP D L GMK G + TGL R+ TSW++
Sbjct: 125 PIVQILDTGNLVVR-NSGDD--QDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRA 181
Query: 196 ADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPS-NTTFIFQPIVVQN 254
DDPS GN+T+++D + +PQ + S TGPWNG+ F P+ I++ V
Sbjct: 182 IDDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYVFT 241
Query: 255 KDEVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNS 313
++EVYY Y+ + ++ +++NP G +QR W + W + +A C Y CG
Sbjct: 242 EEEVYYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYG 301
Query: 314 ICSVDQTSHCECLEGFKFKSQQ-------NQTCVRSHSSDCKSG-DRFKKLDDIKLPDLL 365
C+++++ C CL+GF K+ Q ++ CVR DC G D F K+ +KLPD
Sbjct: 302 SCNINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTR 361
Query: 366 DVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSI 425
+++M+L EC+ CL+NC+C AY+ + DGG GC++WFGDLID+++ + NG +
Sbjct: 362 TSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNE--NGQDL 419
Query: 426 YIRVPASEQGNKKLLWIIVILVLPLVILPCVYIARQWSRKRKENETKNLDTNQDLLAFDV 485
Y+R+ +SE + R+ SR
Sbjct: 420 YVRLASSE---------------------IETLQRESSR--------------------- 437
Query: 486 NMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR 545
+++R E +D LP +V+ AT FS +KLG+GGFGPVYKG
Sbjct: 438 ---VSSRKQE-----------EEDLELPFLDLDTVSEATSGFSAGNKLGQGGFGPVYKGT 483
Query: 546 LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605
L GQEVAVKRLS S QG++EFKNE+ LIAKLQHRNLV++LG C+++ E++LIYEY N
Sbjct: 484 LACGQEVAVKRLSRTSRQGVEEFKNEIKLIAKLQHRNLVKILGYCVDEEERMLIYEYQPN 543
Query: 606 KSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQHMN 640
KSLD F+FD ++ L W RV II GIA+ D MN
Sbjct: 544 KSLDSFIFDKERRRELDWPKRVEIIKGIARGMLYLHEDSRLRIIHRDLKASNVLLDSDMN 603
Query: 641 PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSS 700
KISDFG+AR GGDE + NT R+VGTYGYMSPEY ++G FS+KSDVFSFGVL+LEI+S
Sbjct: 604 AKISDFGLARTLGGDETEANTTRVVGTYGYMSPEYQIDGYFSLKSDVFSFGVLVLEIVSG 663
Query: 701 KKNTGVYNTD-SFNLLGHAWSLCKNDRAHELMDPVLQNEVS-LPMLVRYINVALLCVQEN 758
++N G N + NLLGHAW D+A+E++D + + + ++R I++ LLCVQ++
Sbjct: 664 RRNRGFRNEEHKLNLLGHAWRQFLEDKAYEIIDEAVNESCTDISEVLRVIHIGLLCVQQD 723
Query: 759 AEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVS 818
+DRP MS VV ++ + L P++P F F + +N+ + S++ S E S N T+S
Sbjct: 724 PKDRPNMS-VVVLMLSSEMLLLDPRQPGF--FNE-RNLLF-SDTVSINLEIPSNNFQTMS 778
Query: 819 LIYPR 823
+I PR
Sbjct: 779 VIDPR 783
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 594 bits (1531), Expect = e-169, Method: Compositional matrix adjust.
Identities = 345/843 (40%), Positives = 503/843 (59%), Gaps = 70/843 (8%)
Query: 37 FSLAADTLTPTT--LIRDGETLVSPSQRFELGFFSPGKSQNR-YVGIWYQQIPD-TVVWV 92
S+ +TL+ T I +TLVSP FE+GFF ++ +R Y+G+WY+++ D T VWV
Sbjct: 29 LSIYINTLSSTESLTISSNKTLVSPGSIFEVGFF---RTNSRWYLGMWYKKVSDRTYVWV 85
Query: 93 ANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSR--EVKNPVAQLLDNGNLVIRD 150
ANR++P+ + G L +S NLVLL+ SN +W +N++R E VA+LL NGN V+RD
Sbjct: 86 ANRDNPLSNAIGTLKISG-NNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRD 144
Query: 151 NSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDI 210
+S ++++E YLWQSFDYPTDT+L MKLG++L+TGL R+ TSW+S+DDPS GNF+++L+
Sbjct: 145 SSNNDASE-YLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLET 203
Query: 211 HVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPI-VVQNKDEVYYMYESYSSPI 269
LP+ + + +GPWNG+ F P + + ++N +EV Y + ++
Sbjct: 204 QSLPEFYLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVYNFIENNEEVAYTFRMTNNSF 263
Query: 270 IMILRVNPLGQVQRLIWHEMSTGWQVFFTAP-DPFCH-YGDCGPNSICSVDQTSHCECLE 327
L + G QRL W+ W F+++P DP C Y CGP + C V+ + C C++
Sbjct: 264 YSRLTLISEGYFQRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPYAYCDVNTSPVCNCIQ 323
Query: 328 GFKFKSQQNQT-------CVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEA 380
GF ++ Q C+R C SGD F ++ +KLP+ +++ S+ +KEC+
Sbjct: 324 GFNPRNIQQWDQRVWAGGCIRRTQLSC-SGDGFTRMKKMKLPETTMATVDRSIGVKECKK 382
Query: 381 ECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKK-TDNHTNGVSIYIRVPASEQGNK-- 437
C+ +C+C A+AN+ + +GGSGC++W L D++ + +G +Y+R+ A++ K
Sbjct: 383 RCISDCNCTAFANADIRNGGSGCVIWTERLEDIRNYATDAIDGQDLYVRLAAADIAKKRN 442
Query: 438 ---KLLWIIV-ILVLPLVILPCVYIARQWSRKRKENETKNLDTNQDLLAFDVNMGITTRT 493
K++ + V + VL L+I+ C++ +Q K N NQ+L +N + +
Sbjct: 443 ASGKIISLTVGVSVLLLLIMFCLWKRKQKRAKASAISIANTQRNQNL---PMNEMVLSSK 499
Query: 494 NEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVA 553
EF G+ K ++ LPL +V ATENFS +KLG+GGFG VYKGRLL+G+E+A
Sbjct: 500 REF-----SGEYKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIA 554
Query: 554 VKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF 613
VKRLS S QG EF NE+ LIA+LQH NLV++LGCCIE EK+LIYEY+ N SLD +LF
Sbjct: 555 VKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLF 614
Query: 614 DPTKKHLLGWQLRVRIIDGIAQ-------------------------DQHMNPKISDFGM 648
T++ L W R I +G+A+ D++M PKISDFGM
Sbjct: 615 GKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGM 674
Query: 649 ARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYN 708
AR+F DE + NT ++VGTYGYMSPEYA+ G+FS KSDVFSFGV++LEI+S KKN G YN
Sbjct: 675 ARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYN 734
Query: 709 TDSFN-LLGHAWSLCKNDRAHELMDPVLQNEVSL-------PMLVRYINVALLCVQENAE 760
D N LL + WS K RA E++DPV+ + +S +++ I + LLCVQE AE
Sbjct: 735 LDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAE 794
Query: 761 DRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSLI 820
RP MS VV M +E +P PK P + + SS+ +E +VN T S+I
Sbjct: 795 HRPAMSSVVWMFGSEATEIPQPKPPGYCVRRSPYELDPSSSWQCDENESWTVNQYTCSVI 854
Query: 821 YPR 823
R
Sbjct: 855 DAR 857
|
Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain. Brassica oleracea var. acephala (taxid: 3713) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 588 bits (1517), Expect = e-167, Method: Compositional matrix adjust.
Identities = 340/852 (39%), Positives = 509/852 (59%), Gaps = 67/852 (7%)
Query: 26 FSSLIFYWVIKFSLAADTLTPTTLIRDG---ETLVSPSQRFELGFFSPGKSQNRYVGIWY 82
S +++++ + S+AA+T+ +RDG + LVSP + FELGFFSPG S +R++GIWY
Sbjct: 11 LSLFLYFFLYESSMAANTIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHRFLGIWY 70
Query: 83 QQIPD-TVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREV---KNPVA 138
I D VVWVANR +PI D++GVL +SN GNLVLL+ N T+WSSN+ N V
Sbjct: 71 GNIEDKAVVWVANRATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESSTTNNNNRVV 130
Query: 139 QLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADD 198
+ D GN V+ + T+ +W+SF++PTDT L M++ + +TG SW+S D
Sbjct: 131 SIHDTGNFVLSETD----TDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSETD 186
Query: 199 PSPGNFTHRLDIHVLPQVCVYNGS-AKYTCTGPWNGVAFGSAPSN---TTFIFQPIVVQN 254
PSPGN++ +D P++ ++ G+ + +G WN F P+ T +++ +
Sbjct: 187 PSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNYLYGFKLSSP 246
Query: 255 KDE---VYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCG 310
DE VY+ Y +++ +V G + L W+E W F + PD C Y CG
Sbjct: 247 PDETGSVYFTYVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPDSECDQYNRCG 306
Query: 311 PNSICSVDQTSH-CECLEGFKFKSQQN--QTCVRSHSSDCKSG-----DRFKKLDDIKLP 362
IC + ++ C C+ G++ S N + C R C+ D F L +KLP
Sbjct: 307 KFGICDMKGSNGICSCIHGYEQVSVGNWSRGCRRRTPLKCERNISVGEDEFLTLKSVKLP 366
Query: 363 DLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNG 422
D ++ + ++ ++C CL+NCSC AY+ GG GC++W DL+DL++ + G
Sbjct: 367 DF-EIPEHNLVDPEDCRERCLRNCSCNAYS----LVGGIGCMIWNQDLVDLQQFE--AGG 419
Query: 423 VSIYIRVPASEQG-NKKLLWIIVILVLPLVILPCVYIARQWSRKRKENET-----KNLDT 476
S++IR+ SE G N+K +++ VL VIL ++ W KRK++ + KN DT
Sbjct: 420 SSLHIRLADSEVGENRKTKIAVIVAVLVGVILIGIFALLLWRFKRKKDVSGAYCGKNTDT 479
Query: 477 NQDLLAFDVNMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEG 536
+ + + T+ + + +GK S LP+FS ++ AT +F +++LG G
Sbjct: 480 SVVVADLTKSKETTSAFSGSVDIMIEGK-AVNTSELPVFSLNAIAIATNDFCKENELGRG 538
Query: 537 GFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596
GFGPVYKG L +G+E+AVKRLS +SGQG+ EFKNE++LIAKLQHRNLVRLLGCC E EK
Sbjct: 539 GFGPVYKGVLEDGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEK 598
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------------------- 635
+L+YEYM NKSLD FLFD TK+ L+ W+LR II+GIA+
Sbjct: 599 MLVYEYMPNKSLDFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLKVS 658
Query: 636 ----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFG 691
D MNPKISDFGMAR+FGG++ + NT R+VGTYGYMSPEYA+EG+FSVKSDV+SFG
Sbjct: 659 NVLLDAEMNPKISDFGMARIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFG 718
Query: 692 VLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVA 751
VL+LEI+S K+NT + +++ +L+G+AW L + R+ EL+DP ++ S +R I+VA
Sbjct: 719 VLLLEIVSGKRNTSLRSSEHGSLIGYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVA 778
Query: 752 LLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCS 811
+LCVQ++A +RP M+ V+ M+ ++ L +P++P FT+ T+ ++ + S S
Sbjct: 779 MLCVQDSAAERPNMASVLLMLESDTATLAAPRQPTFTS-TRRNSIDVNFALDSSQQYIVS 837
Query: 812 VNDVTVSLIYPR 823
N++T +++ R
Sbjct: 838 SNEITSTVVLGR 849
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust.
Identities = 339/844 (40%), Positives = 489/844 (57%), Gaps = 83/844 (9%)
Query: 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVANRNSPIV 100
+T+ + ++DG+ + S +RF GFFS G S+ RYVGIWY Q+ + T+VWVANR+ PI
Sbjct: 23 NTILRSQSLKDGDVIYSEGKRFAFGFFSLGNSKLRYVGIWYAQVSEQTIVWVANRDHPIN 82
Query: 101 DKNGVLTVSNRGNLVLLNQSNGT--IWSSNVSREVKNP--VAQLLDNGNLVIRDNSGSNS 156
D +G++ S RGNL + NGT IWS++V ++ P VA+L D GNLV+ D S
Sbjct: 83 DTSGLIKFSTRGNLCVYASGNGTEPIWSTDVIDMIQEPALVAKLSDLGNLVLLDPVTGKS 142
Query: 157 TESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQV 216
W+SF++PT+T+L MK G+ ++G++R TSW+S DP GN T+R++ PQ+
Sbjct: 143 ----FWESFNHPTNTLLPFMKFGFTRQSGVDRIMTSWRSPGDPGSGNITYRIERRGFPQM 198
Query: 217 CVYNGSAKYTCTGPWNGVAFGSAPSNTT-FIFQPIVVQNKDEVYYMYESYSSPIIMILRV 275
+Y G + TG W G + P T FIF V N DEV Y + + + +
Sbjct: 199 MMYKGLTLWWRTGSWTGQRWSGVPEMTNKFIFNISFVNNPDEVSITYGVLDASVTTRMVL 258
Query: 276 NPLGQVQRLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNSICSVDQTS--HCECLEGFKFK 332
N G +QR W+ W F++AP+ C Y CG N C T C CL G++ K
Sbjct: 259 NETGTLQRFRWNGRDKKWIGFWSAPEDKCDIYNHCGFNGYCDSTSTEKFECSCLPGYEPK 318
Query: 333 SQQN-------QTCVRSHS-SDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLK 384
+ ++ C R + S C + F KL +K+P+ V+++ ++ LKECE CLK
Sbjct: 319 TPRDWFLRDASDGCTRIKADSICNGKEGFAKLKRVKIPNTSAVNVDMNITLKECEQRCLK 378
Query: 385 NCSCRAYANS--KVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASE----QGN-- 436
NCSC AYA++ + DG GCL W G+++D + ++G Y+RV SE GN
Sbjct: 379 NCSCVAYASAYHESQDGAKGCLTWHGNMLDTRTY--LSSGQDFYLRVDKSELARWNGNGA 436
Query: 437 --KKLLWIIVILVLPLVILPCVYIARQWSRKRKENETKNLDTNQDLLA---FDVNMGITT 491
KK L +I+I ++ +V+L + ++R+ ++ L A FD+
Sbjct: 437 SGKKRLVLILISLIAVVMLLLISFHCYLRKRRQRTQSNRLRKAPSSFAPSSFDLEDSFIL 496
Query: 492 RTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQE 551
E DKS+ LPLF +++ AT NF+ Q+KLG GGFGPVYKG L NG E
Sbjct: 497 EELE---------DKSRSRELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGME 547
Query: 552 VAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVF 611
+AVKRLS SGQG++EFKNE+ LI+KLQHRNLVR+LGCC+E EK+L+YEY+ NKSLD F
Sbjct: 548 IAVKRLSKSSGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKSLDYF 607
Query: 612 LFDPTKKHLLGW-------------------QLRVRII------DGIAQDQHMNPKISDF 646
+F ++ L W R+RII + D M PKI+DF
Sbjct: 608 IFHEEQRAELDWPKRMGIIRGIGRGILYLHQDSRLRIIHRDLKASNVLLDNEMIPKIADF 667
Query: 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706
G+AR+FGG++++G+T R+VGTYGYMSPEYA++G FS+KSDV+SFGVL+LEI++ K+N+
Sbjct: 668 GLARIFGGNQIEGSTNRVVGTYGYMSPEYAMDGQFSIKSDVYSFGVLILEIITGKRNSAF 727
Query: 707 YNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV-SLPMLVRYINVALLCVQENAEDRPTM 765
Y +S NL+ H W +N A E++D ++ E +++ +++ LLCVQEN+ DRP M
Sbjct: 728 YE-ESLNLVKHIWDRWENGEAIEIIDKLMGEETYDEGEVMKCLHIGLLCVQENSSDRPDM 786
Query: 766 SDVVSMINNELFNLPSPKEPPFT------TFTKGKNMKYSSNSTSGTSEFCSVNDVTVSL 819
S VV M+ + +LPSPK P FT T T G + + S TS T +NDVT++
Sbjct: 787 SSVVFMLGHNAIDLPSPKHPAFTAGRRRNTKTGGSSDNWPSGETSST-----INDVTLTD 841
Query: 820 IYPR 823
+ R
Sbjct: 842 VQGR 845
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1 | Back alignment and function description |
|---|
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 342/845 (40%), Positives = 490/845 (57%), Gaps = 77/845 (9%)
Query: 37 FSLAADTLTPTT--LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVA 93
S++ +TL+ T I +T+VSP FELGFF + Y+GIWY++I T VWVA
Sbjct: 28 LSISVNTLSATESLTISSNKTIVSPGGVFELGFFRI-LGDSWYLGIWYKKISQRTYVWVA 86
Query: 94 NRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNP-VAQLLDNGNLVIRDNS 152
NR++P+ + G+L +SN NLV+L+ S+ +WS+N++ V++ VA+LLDNGN V+R S
Sbjct: 87 NRDTPLSNPIGILKISN-ANLVILDNSDTHVWSTNLTGAVRSSVVAELLDNGNFVLR-GS 144
Query: 153 GSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHV 212
N ++ +LWQSFD+PTDT+L MKLG D + GL R+ TSWKS+ DPS G+F +L+
Sbjct: 145 KINESDEFLWQSFDFPTDTLLPQMKLGRDHKRGLNRFVTSWKSSFDPSSGSFMFKLETLG 204
Query: 213 LPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTF---IFQPIVVQNKDEVYYMYESYSSPI 269
LP+ + + +GPW+G+ F + I+ +N++EV Y +
Sbjct: 205 LPEFFGFTSFLEVYRSGPWDGLRFSGILEMQQWDDIIYN--FTENREEVAYTFRVTDHNS 262
Query: 270 IMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNSICSVDQTSHCECLEG 328
L +N +G+++ +W W +F+ P C YG CGP + C + + C C++G
Sbjct: 263 YSRLTINTVGRLEGFMWEPTQQEWNMFWFMPKDTCDLYGICGPYAYCDMSTSPTCNCIKG 322
Query: 329 FKFKSQQNQT-------CVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAE 381
F+ S Q+ C R C DRF +L ++K+P +++ + LKECE +
Sbjct: 323 FQPLSPQDWASGDVTGRCRRKTQLTCGE-DRFFRLMNMKIPATTAAIVDKRIGLKECEEK 381
Query: 382 CLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQGNKKLLW 441
C +C+C AYANS + +GGSGC++W G+ D++ + +G +++R+ A+E G ++ +
Sbjct: 382 CKTHCNCTAYANSDIRNGGSGCIIWIGEFRDIR--NYAADGQDLFVRLAAAEFGERRTIR 439
Query: 442 II---------VILVLPLVILPCVYIARQWSRKRKENETKNLDTNQDLLAFDVNMGITTR 492
++LVL +I C + +Q + D Q+L+
Sbjct: 440 GKIIGLIIGISLMLVLSFIIY-CFWKKKQKRARATAAPIGYRDRIQELII---------- 488
Query: 493 TNEFCEADG-DGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQE 551
TN + G + +D LPL F +V ATENFS + LG GGFG VYKGRLL+GQE
Sbjct: 489 TNGVVMSSGRRLLGEEEDLELPLTEFETVVMATENFSDSNILGRGGFGIVYKGRLLDGQE 548
Query: 552 VAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVF 611
+AVKRLS S QG EFKNE+ LIA+LQH NLVRLL CCI EKILIYEY+ N SLD
Sbjct: 549 IAVKRLSEMSSQGTNEFKNEVRLIARLQHINLVRLLSCCIYADEKILIYEYLENGSLDSH 608
Query: 612 LFDPTK-KHLLGWQLRVRIIDGIAQ-------------------------DQHMNPKISD 645
LF+ T+ + L WQ R II+GIA+ D++M PKISD
Sbjct: 609 LFETTQSSNKLNWQTRFSIINGIARGLLYLHQDSRFKIIHRDLKASNVLLDKNMTPKISD 668
Query: 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTG 705
FGMAR+F DE + NT+++VGTYGYMSPEYA+EG+FSVKSDVFSFGVL+LEI+S K+N G
Sbjct: 669 FGMARIFERDETEANTRKVVGTYGYMSPEYAMEGIFSVKSDVFSFGVLVLEIVSGKRNRG 728
Query: 706 VYNT-DSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML------VRYINVALLCVQEN 758
+N+ NLLG+ W K + E++D ++ + S L +R I + LLCVQE
Sbjct: 729 FHNSGQDNNLLGYTWENWKEGKGLEIVDSIIVDSSSSMSLFQPHEVLRCIQIGLLCVQER 788
Query: 759 AEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVS 818
AEDRP MS VV M+ +E +P PK P + + SS+ST SE +VN +TVS
Sbjct: 789 AEDRPKMSSVVLMLGSEKGEIPQPKRPGYCVGRSSLDTADSSSSTKRDSESLTVNQITVS 848
Query: 819 LIYPR 823
+I R
Sbjct: 849 VINAR 853
|
Female specificity determinant of self-incompatibility. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 549 bits (1415), Expect = e-155, Method: Compositional matrix adjust.
Identities = 322/845 (38%), Positives = 471/845 (55%), Gaps = 91/845 (10%)
Query: 40 AADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQI-PDTVVWVANRNSP 98
+++ T IR+G++L+S + FELGFF+P S RYVGIWY+ I P TVVWVANR P
Sbjct: 28 TSNSFTRNHTIREGDSLISEDESFELGFFTPKNSTLRYVGIWYKNIEPQTVVWVANREKP 87
Query: 99 IVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTE 158
++D G L +++ GNLV++N N TIWS+NV E N VA L G+LV+ +S
Sbjct: 88 LLDHKGALKIADDGNLVIVNGQNETIWSTNVEPESNNTVAVLFKTGDLVLCSDS---DRR 144
Query: 159 SYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCV 218
+ W+SF+ PTDT L GM++ + G R WKS DPSPG ++ +D ++ +
Sbjct: 145 KWYWESFNNPTDTFLPGMRVRVNPSLGENRAFIPWKSESDPSPGKYSMGIDPVGALEIVI 204
Query: 219 YNGSAKYTCTGPWNGVAFGSAP-----SNTTFIFQPIVVQNKD-EVYYMYESYSSPIIMI 272
+ G + +GPWN F P +N + F+ ++D VY+ Y + S +
Sbjct: 205 WEGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYGFKLSSPPDRDGSVYFTYVASDSSDFLR 264
Query: 273 LRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNSICSVDQ---TSHCECLEG 328
+ P G ++ W++ W + P C Y CG S+C + + C C++G
Sbjct: 265 FWIRPDGVEEQFRWNKDIRNWNLLQWKPSTECEKYNRCGNYSVCDDSKEFDSGKCSCIDG 324
Query: 329 FKFKSQQNQTCVRSHSSDCK--------------SGDRFKKLDDIKLPDLLDVSLNESMN 374
F+ Q+Q R S C+ D F L IK+PD V L+ N
Sbjct: 325 FE-PVHQDQWNNRDFSGGCQRRVPLNCNQSLVAGQEDGFTVLKGIKVPDFGSVVLHN--N 381
Query: 375 LKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQ 434
+ C+ C ++CSC+AYA G GC++W DLID++ + N SI IR+ S+
Sbjct: 382 SETCKDVCARDCSCKAYALVV----GIGCMIWTRDLIDMEHFERGGN--SINIRLAGSKL 435
Query: 435 GNKK---LLWIIVILVLPLVILP-CVYIARQWSR-------KRKENETKNLDTNQDLLAF 483
G K LWIIV V+ +L C++I ++ + K+K+ ++ N+D +
Sbjct: 436 GGGKENSTLWIIVFSVIGAFLLGLCIWILWKFKKSLKAFLWKKKDITVSDIIENRDYSSS 495
Query: 484 DVNMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYK 543
+ + + D+ LP+FSF SV +AT +F+ ++KLG+GGFG VYK
Sbjct: 496 PIKVLVG--------------DQVDTPDLPIFSFDSVASATGDFAEENKLGQGGFGTVYK 541
Query: 544 GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603
G G+E+AVKRLS +S QGL+EFKNE++LIAKLQHRNLVRLLGCCIE EK+L+YEYM
Sbjct: 542 GNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYM 601
Query: 604 VNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQH 638
NKSLD FLFD +K+ L W+ R +I GIA+ D
Sbjct: 602 PNKSLDRFLFDESKQGSLDWRKRWEVIGGIARGLLYLHRDSRLKIIHRDLKASNILLDTE 661
Query: 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
MNPKISDFGMAR+F + NT R+VGTYGYM+PEYA+EG+FS KSDV+SFGVL+LEI+
Sbjct: 662 MNPKISDFGMARIFNYRQDHANTIRVVGTYGYMAPEYAMEGIFSEKSDVYSFGVLILEIV 721
Query: 699 SSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQEN 758
S +KN TD +L+G+AW L + E++DP++++ + +R I+V +LC Q++
Sbjct: 722 SGRKNVSFRGTDHGSLIGYAWHLWSQGKTKEMIDPIVKDTRDVTEAMRCIHVGMLCTQDS 781
Query: 759 AEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVS 818
RP M V+ M+ ++ LP P++P F +F +++ + + + SVNDVT +
Sbjct: 782 VIHRPNMGSVLLMLESQTSQLPPPRQPTFHSFLNSGDIELNFDG----HDVASVNDVTFT 837
Query: 819 LIYPR 823
I R
Sbjct: 838 TIVGR 842
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 823 | ||||||
| 224115098 | 802 | predicted protein [Populus trichocarpa] | 0.927 | 0.951 | 0.479 | 0.0 | |
| 359493711 | 1081 | PREDICTED: G-type lectin S-receptor-like | 0.904 | 0.688 | 0.467 | 0.0 | |
| 224122858 | 831 | predicted protein [Populus trichocarpa] | 0.930 | 0.921 | 0.464 | 0.0 | |
| 255587572 | 822 | S-locus-specific glycoprotein S6 precurs | 0.934 | 0.935 | 0.468 | 0.0 | |
| 359493740 | 2422 | PREDICTED: uncharacterized protein LOC10 | 0.928 | 0.315 | 0.446 | 0.0 | |
| 255555127 | 834 | S-locus-specific glycoprotein S6 precurs | 0.948 | 0.936 | 0.450 | 0.0 | |
| 359493715 | 1603 | PREDICTED: uncharacterized protein LOC10 | 0.872 | 0.447 | 0.476 | 0.0 | |
| 356514907 | 778 | PREDICTED: G-type lectin S-receptor-like | 0.890 | 0.942 | 0.447 | 0.0 | |
| 224122958 | 812 | predicted protein [Populus trichocarpa] | 0.919 | 0.932 | 0.454 | 0.0 | |
| 359496546 | 866 | PREDICTED: receptor-like serine/threonin | 0.968 | 0.920 | 0.439 | 0.0 |
| >gi|224115098|ref|XP_002316939.1| predicted protein [Populus trichocarpa] gi|222860004|gb|EEE97551.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/846 (47%), Positives = 539/846 (63%), Gaps = 83/846 (9%)
Query: 17 MEILPCFNIFSSLIFYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNR 76
ME LP F FS+L + S +AD +TP ++DG+TL+S SQ FELGFFSPG S+ R
Sbjct: 1 MESLPFFIFFSTLFIQSLHFLSFSADIITPDLPVKDGQTLISVSQSFELGFFSPGTSKYR 60
Query: 77 YVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNP 136
YVGIWY++ P+TVVWVANRN+P+ D GVLT+ NRGNLVLL+Q IWSSN S + P
Sbjct: 61 YVGIWYKKSPETVVWVANRNNPLTDHFGVLTIDNRGNLVLLDQIKNIIWSSNSSSIIAGP 120
Query: 137 VAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSA 196
VAQLLD+GNLV+RDN S +TESY WQSFD P+DT+L GMKLGW+L+TG ERY +W+S
Sbjct: 121 VAQLLDSGNLVVRDNGSSRNTESYRWQSFDQPSDTLLPGMKLGWNLKTGQERYLITWRSI 180
Query: 197 DDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPIVVQNKD 256
DPSPG+FT+RLDIH LPQ+ + GS K +GPWNG+ FG P +F+PI+V+N+D
Sbjct: 181 SDPSPGDFTYRLDIHGLPQLFIVVGSVKKVRSGPWNGIFFGGTPKVHNSVFEPILVRNED 240
Query: 257 EVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSIC 315
E+YY Y ++ + L +N G V+RL+ + ++GW ++ P C +YG CG N IC
Sbjct: 241 EIYYTYRLLNNSVCSRLTLNQSGAVERLVMYGQNSGWTTIYSVPVDTCENYGQCGANGIC 300
Query: 316 SVDQTSHCECLEGFKFKSQQ---------NQTCVRSHSSDCKSGDRFKKLDDIKLPDLLD 366
+ CECL+GFK ++ ++ C + DC+SG+ F KL +KLPDLL+
Sbjct: 301 RTRTSPICECLKGFKSIPEEELDIQNFYGSRKCETRLTLDCQSGEGFLKLPGVKLPDLLE 360
Query: 367 VSLNESMNLKECEAECLKNCSCRAYANSKVTDG--GSGCLMWFGDLIDLKKTDNHTNGVS 424
LNESMNLKECEAEC KNCSC A+A + ++ G GSGCLMWFG+LID+++ T G
Sbjct: 361 FRLNESMNLKECEAECFKNCSCSAFATTNLSGGGDGSGCLMWFGNLIDIREQSGSTIGQD 420
Query: 425 IYIRVPASEQGNKKLLWIIVILVLPLVILPCVYIARQWSRKRKENETKNLDTNQDLLAFD 484
I+IRVPASE + +AR S+++K +T + + LL
Sbjct: 421 IHIRVPASE----------------------LEMARS-SKRKKMLKTALVASMSALLGIF 457
Query: 485 VNMGITTRTNEFCEADGDGKDKSKDS-SLPLFSFASVTAATENFSIQSKLGEGGFGPVYK 543
V+ G D+ K+ PLF ++ AT NF+ S +G GGFG VYK
Sbjct: 458 VS----------------GMDRRKEGMEAPLFDLDTIATATNNFAPDSIIGAGGFGSVYK 501
Query: 544 GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603
G+LL GQE+AVK+LS SGQG++EF+NE++LIAKLQHRNLV LLG CI + E++LIYEYM
Sbjct: 502 GKLLTGQEIAVKKLSMNSGQGVEEFRNEVVLIAKLQHRNLVGLLGSCIHREERMLIYEYM 561
Query: 604 VNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQH 638
NKSLD F+FD + LLGW+ R II GIA+ D +
Sbjct: 562 PNKSLDYFIFDHERSALLGWKERFVIILGIARGLLYLHQDSKLQIVHRDLKPSNVLLDSN 621
Query: 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
+ PKISDFG+AR+ G D + T+R++GTYGYM+PEYA++G FSVKSDVFS GVL+LEI+
Sbjct: 622 LIPKISDFGLARISGDDGKETKTRRVIGTYGYMAPEYAIDGKFSVKSDVFSLGVLLLEII 681
Query: 699 SSKKNTGVYNTD-SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQE 757
S KKN G + D +LLGHAW + RA EL+D L++ L+R I V LLCVQ+
Sbjct: 682 SGKKNRGFVHPDHHHHLLGHAWLMWNEGRASELIDTGLEDTSGKSQLLRCIQVGLLCVQK 741
Query: 758 NAEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTV 817
EDRP MS VV M+ NE LP PK+P F F + ++ S +TS + S N+ +
Sbjct: 742 LPEDRPVMSTVVFMLANEGAVLPQPKQPGF--FIERGSV---SEATSRNEDSYSTNEANI 796
Query: 818 SLIYPR 823
+++ R
Sbjct: 797 TILEAR 802
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493711|ref|XP_002281022.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/825 (46%), Positives = 509/825 (61%), Gaps = 81/825 (9%)
Query: 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIV 100
AD++ I D ETLVS Q FELGFFSPG S+NRY+GIWY+ P T VWVANRN+PI
Sbjct: 296 ADSIRMDQSISDSETLVSSGQSFELGFFSPGSSKNRYLGIWYKNTPQTAVWVANRNNPIA 355
Query: 101 DKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNST-ES 159
D GVLT+ N G LVLLNQS IWS N+SR +NPVAQLL+ GNLV+RD GSN T +S
Sbjct: 356 DSYGVLTIINNGALVLLNQSKSVIWSPNLSRVPENPVAQLLETGNLVLRD--GSNETSKS 413
Query: 160 YLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVY 219
Y+WQSFD P+DTML GMK+GW+L+TGL+R TSWKS+DDPS G+F++ DI+VLP + +
Sbjct: 414 YIWQSFDDPSDTMLPGMKVGWNLKTGLQRKLTSWKSSDDPSLGDFSYGFDINVLPYLVLG 473
Query: 220 NGSAKYTCTGPWNGVAFGSAPSNTTFIFQPIVVQNKDEVYYMYESYSSPIIMILRVNPLG 279
GS+K +GPWNG+ F +++ + V N DEVY +YES ++ II L +N G
Sbjct: 474 VGSSKIVRSGPWNGLEFNGVYVLDNSVYKAVFVANNDEVYALYESNNNKIISRLTLNHSG 533
Query: 280 QVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQTSHCECLEGFKFKSQQ--- 335
+QRL+ + S+ W ++ P C +YG CG N IC + + CECL GF KSQ+
Sbjct: 534 FLQRLLLKKGSSVWDELYSIPSELCENYGHCGANGICRIGKLQICECLTGFTPKSQEEWD 593
Query: 336 ----NQTCVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAY 391
+ C R DC+ + F K+ +KLPDL+D + ++L+EC+ CL NCSC AY
Sbjct: 594 MFNTSSGCTRRMPLDCQIEEGFVKVTGVKLPDLIDFHVIMGVSLRECKVSCLNNCSCTAY 653
Query: 392 ANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQG---NKKLLWIIVILVL 448
A + +G GCLMW GDLID+++ + + IYIR+ SE G N+K +++ILV+
Sbjct: 654 AYTN-PNGSGGCLMWSGDLIDIRELTSEKHAEDIYIRMHTSELGLNTNQKKKKLVIILVI 712
Query: 449 P----LVILPCVYIARQWSRKRKENETKNLDTNQDLLAFDVNMGITTRTNEFCEADGDGK 504
++ L + R W ++ MG D +
Sbjct: 713 STFSGILTLGLSFWFRFWKKR--------------------TMGT------------DQE 740
Query: 505 DKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQG 564
K ++ LPLF ++ AT NFS +K+G GGFG VYKG L G VAVKRLS S QG
Sbjct: 741 SKKENLELPLFDLPTIATATNNFSNTNKIGAGGFGSVYKGNLPEGVAVAVKRLSKNSAQG 800
Query: 565 LKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQ 624
++EFKNE +LIAKLQH+NLVRLLGCCI+ E+IL+YEYM NKSLD F+FD ++ LL W
Sbjct: 801 VQEFKNEAVLIAKLQHKNLVRLLGCCIQGEERILLYEYMPNKSLDYFIFDQNRRALLAWD 860
Query: 625 LRVRIIDGIAQ-------------------------DQHMNPKISDFGMARMFGGDELQG 659
R I+ GIA+ D ++NPKISDFG+AR+FG +E++
Sbjct: 861 KRCEIVMGIARGLLYLHQDSRFQIIHRDLKTSNILLDDNLNPKISDFGLARIFGENEMET 920
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHA 718
TKRIVGTYGYMSPEY ++G FS+K DVFSFGVL+LEI+S +KN G + D NLLGHA
Sbjct: 921 RTKRIVGTYGYMSPEYVIDGHFSIKLDVFSFGVLLLEIVSGEKNRGFSHPDHHHNLLGHA 980
Query: 719 WSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
W L + +RA ELMD L++ ++R I V LLCVQ DRP MS V+ M+ NE
Sbjct: 981 WLLWEQNRALELMDACLEDSCVASQVLRCIQVGLLCVQNLPADRPAMSSVIFMLGNEGAT 1040
Query: 779 LPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSLIYPR 823
LP PK P F T + +++ SG E S N VT+S++ R
Sbjct: 1041 LPQPKHPGFFT----ERSSVDTDTMSGKIELHSENAVTISMLKGR 1081
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122858|ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|222871766|gb|EEF08897.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/844 (46%), Positives = 533/844 (63%), Gaps = 78/844 (9%)
Query: 28 SLIFYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD 87
S++F+ I S A +++ T + DG+TLVS FELGFFSPG S+NRY+GIWY++I
Sbjct: 18 SIVFFLSIP-STAIESINATQSLEDGDTLVSSEGHFELGFFSPGNSRNRYMGIWYKKISS 76
Query: 88 -TVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
TVVWVANRN+P+ D +G+L + GNL +N +NGTIWSSN+SR NPVAQLLD GNL
Sbjct: 77 FTVVWVANRNTPLNDSSGMLKFVDHGNLAFINSTNGTIWSSNISRAAINPVAQLLDTGNL 136
Query: 147 VIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTH 206
V+R + N E++LWQSFDYP D+ L GMK G TGL RY TSWKS DPS G +T+
Sbjct: 137 VVRAEN-DNDPENFLWQSFDYPGDSFLPGMKYGISFVTGLNRYLTSWKSPSDPSTGKYTN 195
Query: 207 RLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSA---PSNTTFIFQPIVVQNKDEVYYMYE 263
+LD + LPQ + GS +GPWNG+ F N + F+ V N++E+YY Y+
Sbjct: 196 KLDPNGLPQYFLSQGSVDQFRSGPWNGLRFSGMINLKPNPIYTFE--FVFNQEEIYYKYQ 253
Query: 264 SYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQTSH 322
+S ++ + ++P G +QR W + + W ++ TA C + CG + +C+++ +
Sbjct: 254 IANSSVLSRMVLSPDGVLQRFTWIDRTQDWTLYLTANMDNCDRFALCGAHGVCNINNSPA 313
Query: 323 CECLEGFKFKSQQ-------NQTCVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNL 375
C+CL+ F+ KS + +Q CVR DC +G+ F K IK+PD N+++NL
Sbjct: 314 CDCLKEFEPKSLEEWTAADWSQGCVRKAPLDCSNGEGFIKYTGIKVPDTRKSWYNKTINL 373
Query: 376 KECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPAS--- 432
+ECE CLKNCSC AYAN V DGGSGC++WFGDLID+++ + NG IYIR+ AS
Sbjct: 374 EECEEVCLKNCSCTAYANLDVRDGGSGCVLWFGDLIDIRQYNE--NGQDIYIRIAASVID 431
Query: 433 ----EQGNKKLLWIIVILVLPLVILPCVYIARQWSRKRKENETK---NLDTNQDLLAFDV 485
+G K++ I++ + L L + + ++ RK K+ + N+ TN
Sbjct: 432 KPVKSRGKKRVRIIVIPVSLVAFSLLALCLFLRFLRKNKQQQLTREGNVVTNP------- 484
Query: 486 NMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR 545
E D + +++D LPLF A++T AT FSI +KLG+GGFGPVYKG
Sbjct: 485 ------------EQDRTKESRNEDLELPLFDLATLTDATNCFSINNKLGQGGFGPVYKGI 532
Query: 546 LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605
L +GQE+AVKRLS +S QG+ EF+NE++ IAKLQHRNLV+LLGCCIE E++LIYEYM N
Sbjct: 533 LQDGQEIAVKRLSKRSRQGINEFRNEVVCIAKLQHRNLVKLLGCCIELEERMLIYEYMPN 592
Query: 606 KSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQHMN 640
KSLD F+FD + LL W R II+GIA+ D MN
Sbjct: 593 KSLDSFIFDKRRNMLLDWTKRFPIINGIARGLLYLHQDSRLRIIHRDLKASNILLDYEMN 652
Query: 641 PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSS 700
PKISDFGMAR FGGDE NT RIVGTYGYMSPEYA++G+FSVKSDVFSFGVL+LEI+S
Sbjct: 653 PKISDFGMARSFGGDETSANTSRIVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIVSG 712
Query: 701 KKNTGVYNTD-SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENA 759
+KN G + + NLLGHAW L K R +L+D + + + ++R I VALLCVQ++
Sbjct: 713 RKNRGFRHAEHKLNLLGHAWMLHKEGRPLDLIDESIVDTCIISEVLRSIEVALLCVQKSP 772
Query: 760 EDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSL 819
EDRP MS VV M+++++ LP PKEP F FT+ +++ S+ST E SVN++T +L
Sbjct: 773 EDRPKMSIVVLMLSSDIV-LPQPKEPGF--FTE-RDLSNDSSSTI-KHEISSVNELTSTL 827
Query: 820 IYPR 823
+ R
Sbjct: 828 LEAR 831
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255587572|ref|XP_002534316.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223525508|gb|EEF28065.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/826 (46%), Positives = 512/826 (61%), Gaps = 57/826 (6%)
Query: 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVANRNSPIV 100
+TL P ++DGETL+S FELGFFS G S++RY+GIWY++IP TVVWV NR P
Sbjct: 10 ETLYPGQSMKDGETLISADGNFELGFFSQGDSRSRYLGIWYKRIPVKTVVWVGNREVPSF 69
Query: 101 DKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESY 160
D GVL V+ +G ++L N + G IWSSN SR KNPV QLLD+GNL+++D +G+N ++
Sbjct: 70 DNLGVLQVNEQGVIILQNSTKGIIWSSNSSRTAKNPVLQLLDSGNLIVKDGNGNN-PDNI 128
Query: 161 LWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYN 220
+WQSFD+P +T+L MKLGW+L GL RY TSWKS DDP+ GNF+ +D+ PQ+ +
Sbjct: 129 VWQSFDFPYNTLLPSMKLGWNLDKGLNRYLTSWKSIDDPAQGNFSCLIDLRGFPQLFMKK 188
Query: 221 GSAKYTCTGPWNGVAFGSAPS-NTTFIFQPIVVQNKDEVYYMYESYSSPIIMILRVNPLG 279
G A +GPWNG+ F +P N +F V NK E+YY YE ++ ++ L V+ G
Sbjct: 189 GDAVQVRSGPWNGLQFTGSPQLNPNPVFNFSFVSNKHEIYYSYELKNTSVVSRLIVSEKG 248
Query: 280 QVQRLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNSICSVDQTSHCECLEGFKFKSQQNQT 338
++R W + + W +FF+ P C Y CG + C+++ C CLEGF KS + +
Sbjct: 249 ALERHNWIDRTQSWTLFFSVPTDQCDTYLLCGAYASCNINSYPVCSCLEGFVPKSPTDWS 308
Query: 339 -------CVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAY 391
CVR C +GD F+KL +KLPD ++ SM+LKECE CL+NCSC AY
Sbjct: 309 ASDWSDGCVRRTELSCHTGDGFRKLKGMKLPDTSSSWVDMSMDLKECEGMCLRNCSCLAY 368
Query: 392 ANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQGNKKLLWIIVILVLPLV 451
ANS + GSGCL+WF LID++K G +YIR+ ASE K V +++ +
Sbjct: 369 ANSDIR--GSGCLLWFDHLIDMRKFTE--GGQDLYIRIAASELAKGKSHGKRVAIIVSCL 424
Query: 452 ILPCVYIARQ---WSRKRKENETKN-----LDTNQDLLAFDVNMGITTRTNEFCEADGDG 503
I+ A ++RKRK N L + + F + G+ T + E GD
Sbjct: 425 IIGMGMTALGSLLYTRKRKRNILGQAVPLVLLVSSFAIHFYIISGLAKET--YIENYGDN 482
Query: 504 KDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ 563
K +D+ L F ++ AT NFS +KLGEGGFGPVYKG LL+GQE+AVKRLS SGQ
Sbjct: 483 GAK-EDTELIAFDLITIRNATGNFSNYNKLGEGGFGPVYKGTLLDGQEIAVKRLSETSGQ 541
Query: 564 GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGW 623
G KEFKNE++LIA+LQHRNLV+LLGCCI EK+LIYEYM NKSLD F+FD + LL W
Sbjct: 542 GGKEFKNEVILIARLQHRNLVKLLGCCIHGDEKMLIYEYMPNKSLDSFIFDKKRSMLLDW 601
Query: 624 QLRVRIIDGIAQ-------------------------DQHMNPKISDFGMARMFGGDELQ 658
+ RII GIA+ D MNPKISDFG+AR FG D+
Sbjct: 602 HMCFRIIGGIARGLLYLHQDSRLRIIHRDLKASNILLDCDMNPKISDFGLARTFGKDQNA 661
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGH 717
NTKR+VGTYGYMSPEYA++G+FSVKSDVFSFGVL+LEI+S K+N G + D S NLLGH
Sbjct: 662 ANTKRVVGTYGYMSPEYAVDGLFSVKSDVFSFGVLVLEIVSGKRNRGFSHLDHSLNLLGH 721
Query: 718 AWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF 777
AW L +RA EL D Q+E S+ ++R I V LLCVQ DRP MS VV M+ +E
Sbjct: 722 AWRLWMEERALELFDKFSQDEYSVSQVLRCIQVGLLCVQRLPHDRPDMSAVVVMLGSE-S 780
Query: 778 NLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSLIYPR 823
+LP PK+P F T + + ++S++ S N+++ +LI PR
Sbjct: 781 SLPQPKQPGFYT----ERDPFEADSSTSKERVWSRNEISSTLIEPR 822
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493740|ref|XP_002280379.2| PREDICTED: uncharacterized protein LOC100262430 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/875 (44%), Positives = 531/875 (60%), Gaps = 111/875 (12%)
Query: 26 FSSLIF-YWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQ 84
F++L+ + +++ S+A DTLT +I DGET+ S FELGFFSP S+NRYVGIWY++
Sbjct: 4 FATLVLVFSILRVSIAVDTLTVNQIITDGETITSAGGSFELGFFSPDSSRNRYVGIWYKK 63
Query: 85 IPD-TVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDN 143
+ TVVWVANR P+ +G+L V++RG LV+LN +N TIWSSN SR +NP AQLLD+
Sbjct: 64 VATRTVVWVANRQIPLTASSGILKVTDRGTLVILNGTNTTIWSSNSSRPAQNPNAQLLDS 123
Query: 144 GNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGN 203
GNLV+++ + S+S E++LWQSFDYP +T+L GMK G + TGL+RY +SWK+ DDPS GN
Sbjct: 124 GNLVMKNGNDSDS-ENFLWQSFDYPCNTLLPGMKFGRNRVTGLDRYLSSWKTTDDPSIGN 182
Query: 204 FTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPS-NTTFIFQPIVVQNKDEVYYMY 262
FT+RLD PQ+ V NGS +GPWNG+ F P ++ + N E YY +
Sbjct: 183 FTYRLDPGGSPQLLVRNGSTVTFRSGPWNGLRFSGFPQLRPNSVYSYAFIFNDKETYYTF 242
Query: 263 ESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQTS 321
E +S +I L ++P G QR W + ++ W ++ +A C Y CG IC ++++
Sbjct: 243 ELVNSSVITRLVLSPEGYAQRFTWIDRTSDWILYSSAQTDDCDSYALCGVYGICEINRSP 302
Query: 322 HCECLEGFKFKSQQN-------QTCVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMN 374
CEC++GF+ K Q N CVRS C+ + F K +KLPD + NESMN
Sbjct: 303 KCECMKGFEPKFQSNWDMADWSDGCVRSTPMVCQKSNGFLKYSGVKLPDTRNSWFNESMN 362
Query: 375 LKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQ 434
LKEC + CL NCSC AY NS + GGSGCL+WFGDLID+++ NG YIR+ SE
Sbjct: 363 LKECASLCLGNCSCTAYTNSDIRGGGSGCLLWFGDLIDIREYTE--NGQDFYIRMAKSEL 420
Query: 435 G------------------------------------NKKLLWIIV-------ILVLPLV 451
G K W+IV I++L LV
Sbjct: 421 GMSLSVPYLRIINSVQVFNDKYCTCVYAFAMTNSGSKGAKRKWVIVSTVSIVGIILLSLV 480
Query: 452 ILPCVYIARQWSRKRKENETKNLDTNQDLLAFDVNMGITTRTNEFCEADGDGKDKSKDSS 511
+ +Y+ R+ +RK N NL + + ++N ++ +D
Sbjct: 481 L--TLYVLRKKRLRRKGN---NLYSKHNCKGAEIN------------------EREEDLE 517
Query: 512 LPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNE 571
LPLF ++ AT+NFS +KLGEGGFGPVYKG L +G+E+AVKRLS +S QGL EFKNE
Sbjct: 518 LPLFDLDTILNATDNFSNDNKLGEGGFGPVYKGMLQDGKEIAVKRLSKESRQGLDEFKNE 577
Query: 572 MMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID 631
+ I+KLQHRNLV+LLGCCI EK+LIYEYM NKSLD F+FD + +L W R II+
Sbjct: 578 VTHISKLQHRNLVKLLGCCIHGEEKMLIYEYMPNKSLDFFIFDGMQSLVLDWPKRFVIIN 637
Query: 632 GIAQ-------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVG 666
GIA+ D MNP+ISDFGMAR F G+E + TKR+VG
Sbjct: 638 GIARGLLYLHQDSRLRIIHRDLKADNVLLDNEMNPRISDFGMARSFRGNESEARTKRVVG 697
Query: 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHAWSLCKND 725
TYGYMSPEYA++GV+S+KSDVFSFGVL+LEI++ K+N G + D + NLLGHAW+L
Sbjct: 698 TYGYMSPEYAIDGVYSIKSDVFSFGVLVLEIVTGKRNRGFNHPDHALNLLGHAWTLYMEG 757
Query: 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785
+ EL+D + + + ++R +NV LLCVQ + +DRP+MS VV M+++E L PKEP
Sbjct: 758 KPLELIDASMGDSCNQSEVLRALNVGLLCVQRSPDDRPSMSSVVLMLSSE-SALHQPKEP 816
Query: 786 PFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSLI 820
F FT+ +NM S+S S + F S N+ T++LI
Sbjct: 817 GF--FTE-RNMLEGSSSASKHAIF-SGNEHTITLI 847
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255555127|ref|XP_002518601.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223542446|gb|EEF43988.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/845 (45%), Positives = 529/845 (62%), Gaps = 64/845 (7%)
Query: 21 PCFNIFSSLIFYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGI 80
P F F+ L FY +FS ++DTLT T + +G+TL+S Q+FELGFF+PG S+N YVGI
Sbjct: 12 PIFLFFTFLSFY-APRFSFSSDTLTSTQSLINGQTLLSTRQKFELGFFTPGNSKNWYVGI 70
Query: 81 WYQQIPD-TVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQ 139
WY+ I D T VWVANR++P+ + +G+ + N+ ++VL +Q N IWSSN + NPV Q
Sbjct: 71 WYKNISDRTYVWVANRDNPLTNSSGIFKIFNQ-SIVLFDQGNNLIWSSNQIK-ATNPVMQ 128
Query: 140 LLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDP 199
LLD G+LV+R+ +N YLWQSFDYPTDT+L MKLGWDL L RY +SWKS DDP
Sbjct: 129 LLDTGDLVLRE---ANVNNQYLWQSFDYPTDTLLPDMKLGWDLNKSLHRYLSSWKSKDDP 185
Query: 200 SPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPI-VVQNKDEV 258
G+++ +LD H P++ ++N K +GPWNG+ F P + V N+ EV
Sbjct: 186 GAGDYSFKLDYHGFPEIFLWNDGRKIYRSGPWNGLRFSGVPEMKPLDYISFDFVTNQSEV 245
Query: 259 YYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNSICSV 317
+Y + S+ L V G++QR W W F+ AP C Y +CGP IC
Sbjct: 246 FYSFHISSNSTYSRLTVTSSGELQRYTWIPERQDWNSFWYAPKDQCDDYKECGPYGICDS 305
Query: 318 DQTSHCECLEGFKFKSQQ-------NQTCVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLN 370
+ + C+C+ GF+ K+ Q + CVR C + D+F L +IKLP+ ++
Sbjct: 306 NASPVCKCMRGFEPKNLQAWNLRDGSGGCVRKTDLQCMN-DKFLHLKNIKLPESSTSFVD 364
Query: 371 ESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVP 430
++LK CE CL+NCSC AYANS +++GG+GC++WFG+L+D+++ G +Y+R+
Sbjct: 365 RIISLKICEELCLRNCSCTAYANSDISNGGTGCVLWFGELLDMRQY-TEGGGQDLYVRLA 423
Query: 431 ASEQGNKK-----LLWIIVILVLPLVILPCVYIARQWSRKRKENETKNL-DTNQDLLAFD 484
AS+ G+ K ++ I V + L+ L +I W R+ E K + + +Q+LL +
Sbjct: 424 ASDIGDGKNVAALIIGISVGIGTLLLGLAACFI---WKRRSVRKEQKGVQERSQNLLLNE 480
Query: 485 VNMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKG 544
V I+++ + E D D + LPLF F ++ AT+NFS ++KLG+GGFG VYKG
Sbjct: 481 VV--ISSKRDYSGEKDKD------ELELPLFDFGTIATATDNFSDENKLGQGGFGCVYKG 532
Query: 545 RLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604
RL+ GQ VAVKRLS S QG++EFKNE+ LIA+LQHRNLVRLLGCCIE EK+LIYEYM
Sbjct: 533 RLVEGQVVAVKRLSKTSVQGIEEFKNEVNLIARLQHRNLVRLLGCCIETNEKVLIYEYME 592
Query: 605 NKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQHM 639
++SLD +F+ K+ LL WQ R I+ GIA+ D
Sbjct: 593 HRSLDSVIFNNAKRSLLNWQRRFNIVCGIARGLLYMHQDSRFRIIHRDLKASNILLDGEW 652
Query: 640 NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
NPKISDFGMAR+FGGD+ + +TKR+VGTYGYMSPEYA++G FSVKSDVFSFGVL+LEI+S
Sbjct: 653 NPKISDFGMARIFGGDQTEASTKRVVGTYGYMSPEYAMDGHFSVKSDVFSFGVLVLEIVS 712
Query: 700 SKKNTGVYNTDS-FNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQEN 758
KN G Y+++S NLLGHAW L K ++ E++D + + S ++R I V LLCVQE
Sbjct: 713 GNKNRGFYHSNSELNLLGHAWRLWKEEKGLEILDSSVGSSFSPSEVLRCIQVGLLCVQER 772
Query: 759 AEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVS 818
AEDRPTMS VV M+++E +P PK P F G+N + +S+ E +VN VTV+
Sbjct: 773 AEDRPTMSSVVLMLSSENATMPHPKTPGFCL---GRNPFETDSSSGKQDESYTVNQVTVT 829
Query: 819 LIYPR 823
++ R
Sbjct: 830 MLDAR 834
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493715|ref|XP_002280938.2| PREDICTED: uncharacterized protein LOC100246941 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/795 (47%), Positives = 499/795 (62%), Gaps = 77/795 (9%)
Query: 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVANRNSPI 99
DT+ L+RDGE L S FELGFF P S RY+G+WY+++ TVVWVANR +P+
Sbjct: 813 VDTIALNQLLRDGEILTSAGGSFELGFFRPDNSSRRYLGMWYKKVSIRTVVWVANRETPL 872
Query: 100 VDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTES 159
D +GVL V+++G L +LN +N +WSSN SR +NP AQ+L++GNLV++D + N E+
Sbjct: 873 ADSSGVLKVTDQGTLAVLNGTNTILWSSNSSRSARNPTAQILESGNLVMKDGNDDNP-EN 931
Query: 160 YLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVY 219
+LWQSFDYP +T+L GMKLG + TGL+RY ++WKSADDPS G+FT+RLD PQ+ +
Sbjct: 932 FLWQSFDYPCNTLLPGMKLGRNTVTGLDRYLSAWKSADDPSKGDFTYRLDPRGYPQLILR 991
Query: 220 NGSAKYTCTGPWNGVAFGSAPS---NTTFIFQPIVVQNKDEVYYMYESYSSPIIMILRVN 276
GSA +GPWNGV F P N+ + ++ V N+ E+Y+ YE +S ++ L +N
Sbjct: 992 KGSAVTFRSGPWNGVRFSGFPELGPNSIYTYE--FVFNEKEMYFRYELVNSSVVSRLVLN 1049
Query: 277 PLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQTSHCECLEGFKFKSQQ 335
P G QR+ W + + GW ++ +AP C Y CG IC+++++ CEC+EGF K Q
Sbjct: 1050 PDGSKQRVNWIDRTNGWILYSSAPKDDCDSYALCGVYGICNINRSPKCECMEGFVPKFQN 1109
Query: 336 N-------QTCVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCSC 388
+ CVRS DC++G+ F K +KLPD + N SM L EC A CL NCSC
Sbjct: 1110 DWDMADWSNGCVRSTPLDCQNGEGFVKFSGVKLPDTRNSWFNRSMGLMECAAVCLSNCSC 1169
Query: 389 RAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQGN----------KK 438
AY N + DGGSGCL+WFGDLID+++ + NG IY+R+ ASE G KK
Sbjct: 1170 TAYTNLDIRDGGSGCLLWFGDLIDIREFNE--NGQEIYVRMAASELGGSKESGSNLKGKK 1227
Query: 439 LLWIIVILVLPLVILPCVYIARQWSRKRKENETKNLDTNQDLLAFDVNMGITTRTNEFCE 498
WIIV V +VI+ + K K K + +++ +G
Sbjct: 1228 RKWIIVGSVSSVVIILVSLFLTLYLLKTKRQRKKGT------MGYNLEVG---------- 1271
Query: 499 ADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS 558
+DS L LF FA+V+ AT +FS +KLGEGGFG VYKG L GQE+AVKRLS
Sbjct: 1272 -------HKEDSKLQLFDFATVSKATNHFSFDNKLGEGGFGLVYKGILQEGQEIAVKRLS 1324
Query: 559 NQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK 618
SGQGL E KNE++ IAKLQHRNLVRLLGCCI EK+LIYEYM NKSLD F+FD T+
Sbjct: 1325 KDSGQGLDELKNEVIYIAKLQHRNLVRLLGCCIHGEEKMLIYEYMSNKSLDSFIFDKTQS 1384
Query: 619 HLLGWQLRVRIIDGIAQ-------------------------DQHMNPKISDFGMARMFG 653
L W R II+GIA+ D+ M PKISDFGMAR FG
Sbjct: 1385 MELDWNKRFLIINGIARGLLYLHQDSRLRIIHRDLKAGNILLDEEMAPKISDFGMARSFG 1444
Query: 654 GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SF 712
G+E + NTKR+VGTYGYMSPEYA++G++S KSDVFSFGVL+LEI+S K+N G + D S
Sbjct: 1445 GNETEANTKRVVGTYGYMSPEYAIDGLYSTKSDVFSFGVLVLEIVSGKRNRGFSHPDHSL 1504
Query: 713 NLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
NLLGHAW+L R ELMD ++ + ++R I+V LLCVQ A+DRP+MS VV M+
Sbjct: 1505 NLLGHAWTLYTEGRYLELMDAMVGDTFQPSEVLRSIHVGLLCVQHCADDRPSMSSVVLML 1564
Query: 773 NNELFNLPSPKEPPF 787
++E+ LP P+EP F
Sbjct: 1565 SSEV-ALPQPREPGF 1578
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356514907|ref|XP_003526143.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/852 (44%), Positives = 514/852 (60%), Gaps = 119/852 (13%)
Query: 17 MEILPCFNIFSS-LIFYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQN 75
M + +FS+ L+F+ + S A DT+T + + DG TLVS FELGFF+PG S N
Sbjct: 1 MALFLAMLVFSNPLVFF--SQISYATDTITQSQPLLDGSTLVSKEGTFELGFFTPGNSPN 58
Query: 76 RYVGIWYQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVK 134
YVGIW++ IP TVVWVANR++P DK+ +L++S GNL+LL ++ IWS+N + V
Sbjct: 59 HYVGIWFKNIPMRTVVWVANRDNPAKDKSNMLSLSKDGNLILLGKNRSLIWSTNATIAVS 118
Query: 135 NPVAQLLDNGNLVIRDNSGSN--STESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTS 192
NPV QLLDNGNLVIR+ N + E+++WQSFDYP DT LQGMKLGW+L+TGL RY T+
Sbjct: 119 NPVVQLLDNGNLVIREEKDDNMDNEENFVWQSFDYPCDTQLQGMKLGWNLKTGLNRYLTA 178
Query: 193 WKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGV----AFGSAPSNTTFIFQ 248
WK+ +DPS G+FT L + P++ + GS +Y +GPWNG+ FG +P+ +F+
Sbjct: 179 WKNWEDPSSGDFTSGLKLGTNPELVISKGSNEYYRSGPWNGIFSSGVFGFSPNP---LFE 235
Query: 249 PIVVQNKDEVYYMYESYSSPIIMILRVN-PLGQVQRLIWHEMSTGWQVFFTAPDPFCH-Y 306
VQN+DEVY Y +S +I I+ +N L QR+ W + W V+ + P C Y
Sbjct: 236 YKYVQNEDEVYVRYTLKNSSVISIIVLNQTLFLRQRITWIPHTRTWSVYQSLPQDSCDVY 295
Query: 307 GDCGPNSICSVDQTSHCECLEGFKFKSQQN-------QTCVRSHSSDC--KSGDRFKKLD 357
CG C ++ + C+CLEGFK KS Q+ + CVRS C K+ D F+ +
Sbjct: 296 NVCGAYGNCMINASPVCQCLEGFKPKSPQDWNQMDWTKGCVRSEPWSCGVKNKDGFRLIA 355
Query: 358 DIKLPDLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTD 417
+K+PD +N SM L++C+A+CLKNCSC A+AN GGSGC +WFGDL+DL+ ++
Sbjct: 356 GMKMPDTTHSWINRSMTLEDCKAKCLKNCSCTAFANMDTGGGGSGCSIWFGDLVDLRISE 415
Query: 418 NHTNGVSIYIRVPASEQGNKKLLWIIVILVLPLVILPCVYIARQWSRKRKENETKNLDTN 477
+G +Y+R+ SE G W+ ++ + +NL+
Sbjct: 416 ---SGQDLYVRMAISENGT-------------------------WTEEKDDGGQENLE-- 445
Query: 478 QDLLAFDVNMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGG 537
LP F A++ AT NFSI +KLGEGG
Sbjct: 446 ----------------------------------LPFFDLATIINATNNFSIDNKLGEGG 471
Query: 538 FGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597
FGPVYKG +L+G E+AVKRLS SGQGLKEFKNE++L AKLQHRNLV++LGCC+E EK+
Sbjct: 472 FGPVYKGTMLDGHEIAVKRLSKSSGQGLKEFKNEVILCAKLQHRNLVKVLGCCVEGEEKM 531
Query: 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---------------------- 635
L+YEYM N+SLD F+FDP + LL W R I+ IA+
Sbjct: 532 LLYEYMPNRSLDSFIFDPAQSKLLDWPTRFNILCAIARGLLYLHQDSRLRIIHRDLKASN 591
Query: 636 ---DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
D +MNPKISDFG+A+M GGD+++GNT RIVGTYGYM+PEYA++G+FS+KSDVFSFGV
Sbjct: 592 ILLDNNMNPKISDFGLAKMCGGDQVEGNTNRIVGTYGYMAPEYAIDGLFSIKSDVFSFGV 651
Query: 693 LMLEILSSKKN-TGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVA 751
L+LEI+S KKN T Y S NL+GHAW L K +L+D L + ++ LVR I V
Sbjct: 652 LLLEIISGKKNRTVTYEEHSDNLIGHAWRLWKEGIPEQLIDASLVDSCNISELVRCIQVG 711
Query: 752 LLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCS 811
LLC+Q + EDRP M+ VV M+++E +L PK P F KN+ G E CS
Sbjct: 712 LLCLQHHPEDRPNMTTVVVMLSSE-NSLSQPKVPGFLI----KNISIEGEQPCGRQESCS 766
Query: 812 VNDVTVSLIYPR 823
N+VTVSL+ R
Sbjct: 767 TNEVTVSLLNAR 778
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122958|ref|XP_002330406.1| predicted protein [Populus trichocarpa] gi|222871791|gb|EEF08922.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/848 (45%), Positives = 499/848 (58%), Gaps = 91/848 (10%)
Query: 25 IFSSLIFYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQ 84
IF +F+ ++K S A D + T +RDGETLVS FELGFF+P S +RY+G+WY++
Sbjct: 7 IFVYSLFFSILKISSALDAMNTTQSLRDGETLVSTGGSFELGFFTPAGSTSRYLGLWYKK 66
Query: 85 IPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNG 144
P TVVWVANR PI +K G L V+++G LVLLN +N +WSSN S V+NPVAQLLD+G
Sbjct: 67 SPQTVVWVANRGIPISNKFGTLNVTSQGILVLLNGTNNIVWSSNTSTTVQNPVAQLLDSG 126
Query: 145 NLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNF 204
NLV+RD + N +++LWQSFDYP DT+L GMKLG +L TGL + +SWK ++P+PG F
Sbjct: 127 NLVVRDGN-DNKADNFLWQSFDYPCDTLLPGMKLGSNLVTGLNSFLSSWKGKENPAPGQF 185
Query: 205 THRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPS---NTTFIFQPIVVQNKDEVYYM 261
T +D+ PQ+ + + G WNG F P + + F+ V N++EVY+
Sbjct: 186 TLGIDVQGYPQLILRKETRIMYRVGSWNGQYFTGFPELKPDPIYTFE--FVFNRNEVYFK 243
Query: 262 YESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQT 320
+E +S + L V P G VQ W + W VF TA C +Y CG N+ C + +
Sbjct: 244 FELQNSSVFSRLTVTPSGLVQLFTWSHQTNDWYVFATAVVDRCENYALCGANARCDSNSS 303
Query: 321 SHCECLEGFKFKS-----QQNQT--CVRSHSSDCKSGDRFKKLDDIKLPDLLDVSLNESM 373
C+CL+GF KS QN T C+R DC D F+ +KLPD ++S
Sbjct: 304 PVCDCLDGFIHKSPTEWNSQNWTGGCIRRTPLDCTDKDGFQSYTGVKLPDTSSSWYDDSF 363
Query: 374 NLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASE 433
+L ECE C++NCSC AYAN GSGCL WFGDLID ++ G IYIR+ AS+
Sbjct: 364 SLVECEGLCIQNCSCFAYANLDFRGRGSGCLRWFGDLIDTRRLAE--GGQDIYIRLAASQ 421
Query: 434 QG-----------NKKLLWIIVILVLPLVILPCVYIARQWSRKRKENETKNLDTNQDLLA 482
G + ++ VIL ++IL V+ R+RK + N +
Sbjct: 422 SGVTGEKKRKKKTHAGVIGGAVILGSSILILGIVFCI----RRRKHRKNGNFEDR----- 472
Query: 483 FDVNMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVY 542
K ++ LP+ ++ AT+NFS KLGEGGFG VY
Sbjct: 473 -----------------------KEEEMELPMLDLTTIEHATDNFSSSKKLGEGGFGAVY 509
Query: 543 KGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602
KG L+ GQE+AVKRLS SGQGL EFKNE++LIAKLQHRNLV+LLGCCI + EK+LIYEY
Sbjct: 510 KGELIEGQEIAVKRLSKSSGQGLNEFKNEVLLIAKLQHRNLVKLLGCCIHEDEKMLIYEY 569
Query: 603 MVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQ 637
M N+SLD F+FDPT++ L W R IIDGIA+ D
Sbjct: 570 MPNRSLDSFIFDPTRRKFLDWSKRTHIIDGIARGLLYLHQDSRLRIIHRDIKASNILLDN 629
Query: 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
+NPKISDFG+ARMFGGD+ + NTKR+VGTYGYMSPEYAL+G FSVKSDVFSFGVL+LEI
Sbjct: 630 ELNPKISDFGLARMFGGDQTEANTKRVVGTYGYMSPEYALDGHFSVKSDVFSFGVLVLEI 689
Query: 698 LSSKKNTGVYNTD--SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCV 755
+S KKN G + D NLLGHAW L N EL+D + + +R I+VALLCV
Sbjct: 690 VSGKKNRGFCHPDYNQKNLLGHAWMLWFNGIPLELIDECFADSCTPSEALRCIHVALLCV 749
Query: 756 QENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDV 815
Q+ EDRP MS VV M+ +E LP PK+P F + SSN S N+V
Sbjct: 750 QQRPEDRPNMSSVVLMLGSE-NPLPQPKQPGFFMGSNPPEKDTSSNKHQSH----SANEV 804
Query: 816 TVSLIYPR 823
TV+L+ R
Sbjct: 805 TVTLLQAR 812
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359496546|ref|XP_002270295.2| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/876 (43%), Positives = 530/876 (60%), Gaps = 79/876 (9%)
Query: 9 IFLFSVISMEILPC---FNIFSSLIFYWVIKFSL---AADTLTPTTLIRDGETLVSPSQR 62
+FLFS E + C F ++ L F ++ F + + DT+T I +G+TLVS
Sbjct: 9 VFLFSHFLSETVCCITGFLCYNVLCFCFLTLFPIIVISGDTITANQSITNGQTLVSAGGD 68
Query: 63 FELGFFSPGKSQNRYVGIWYQQIP-DTVVWVANRNSPIV--DKNGVLTVSNRGNLVLLNQ 119
FELGFFSPG S+ YVGIWY+ IP + VVWVANR++PI+ V+ + +RGN+V++++
Sbjct: 69 FELGFFSPGDSK-WYVGIWYKNIPKERVVWVANRDNPILTNSSGSVVKIGDRGNIVIMDE 127
Query: 120 SNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLG 179
WS+N S V NPVAQLLD GNLV+R++ ++ E+YLWQSFDY TDT+L GMKLG
Sbjct: 128 DLHVFWSTNESTAV-NPVAQLLDTGNLVVREDKDADP-ENYLWQSFDYLTDTLLPGMKLG 185
Query: 180 WDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSA 239
WD +TG RY TSWKS +DPS G+++ +LD P++ ++N K +GPWNGV F
Sbjct: 186 WDQKTGSNRYLTSWKSKEDPSSGDYSFKLDPRGFPEIFIWNKQEKKYRSGPWNGVRFSGV 245
Query: 240 P---SNTTFIFQPIVVQNKDEVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVF 296
P S++ F F N+D YY YE + I L V+ G +QR W E W ++
Sbjct: 246 PEMKSSSVFTFD--FEWNQDGAYYSYELTNKSITSRLMVSSAGSLQRYTWIETRQVWNLY 303
Query: 297 FTAPDPFCH-YGDCGPNSICSVDQTSHCECLEGFKFKSQQ-------NQTCVRSHSSDCK 348
+ AP C Y +CGP IC + + C+C GF+ K+ Q + C R DC
Sbjct: 304 WFAPKDQCDDYRECGPYGICDTNSSPVCKCPRGFEPKNPQAWNLRDGSDGCSRKTEFDCN 363
Query: 349 SGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFG 408
+GD F L +KLP+ +++SM+LK+CE C KNCSC YAN ++T GC++W
Sbjct: 364 NGDGFLALKRMKLPETGSSFVDKSMSLKDCEMTCRKNCSCTGYANPEITSD-KGCIIWTT 422
Query: 409 DLIDLKKTDNHTNGVSIYIRVPASEQGNK-------KLLWIIVILVLPLVILPCVYIARQ 461
DL+D+++ G +YIRV ASE G++ K++ + I V V+L + I
Sbjct: 423 DLLDMREYAEGEGGQDLYIRVAASELGSENGSNKTVKIIKVTCITVGSAVLLLGLGICYL 482
Query: 462 WSRKRKENETKNLDTNQDLLAFDVNMGITTRTNEF--------CEADGDGKDKSKDSSLP 513
W RK+ + ++ + G++ R++++ + D + K+ + LP
Sbjct: 483 WKRKKMKIIVAHIVSKP---------GLSERSHDYILNEAVIPSKRDYTDEVKTDELELP 533
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMM 573
LF F ++ AT NFS +KLG+GGFG VYKG LL G+E+AVKRL+ SGQG++EF NE+
Sbjct: 534 LFDFGTIVLATNNFSDTNKLGQGGFGCVYKGMLLEGEEIAVKRLAKNSGQGIEEFMNEVR 593
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGI 633
LIA+LQHRNLV+LLGCC+E EK+LIYEYM N+SLD LFD K LL W R II G+
Sbjct: 594 LIARLQHRNLVQLLGCCVEMEEKMLIYEYMQNRSLDSILFDEKKSSLLDWGRRFNIICGV 653
Query: 634 AQ-------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668
A+ D MNPKISDFGMAR+FG D+ + NTKR+VGTY
Sbjct: 654 ARGLLYLHQDSRFRIIHRDLKASNVLLDGEMNPKISDFGMARIFGRDQTEANTKRVVGTY 713
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYN-TDSFNLLGHAWSLCKNDRA 727
GYMSPEYA++G+FSVKSDVFSFGVL+LEI+S KKN G Y+ D NLLGHAW L + +
Sbjct: 714 GYMSPEYAMDGLFSVKSDVFSFGVLVLEIISGKKNRGFYHLNDEHNLLGHAWRLWREGKG 773
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPF 787
ELMD + + ++R I V LLCVQE+AEDRP MS VV M+++E LP PK P F
Sbjct: 774 LELMDSSVSESCAPYDVLRCIQVGLLCVQEHAEDRPVMSSVVLMLSSETATLPLPKNPGF 833
Query: 788 TTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSLIYPR 823
G+ + + +S+S E +VN VTV+++ R
Sbjct: 834 CL---GRKLVETDSSSSKQEETFTVNQVTVTVMDAR 866
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 823 | ||||||
| TAIR|locus:2141181 | 850 | RK3 "receptor kinase 3" [Arabi | 0.736 | 0.712 | 0.397 | 9.1e-167 | |
| TAIR|locus:2131684 | 783 | AT4G27290 [Arabidopsis thalian | 0.492 | 0.517 | 0.397 | 9.5e-166 | |
| TAIR|locus:2018506 | 847 | RK2 "receptor kinase 2" [Arabi | 0.727 | 0.707 | 0.394 | 2.5e-164 | |
| TAIR|locus:2018546 | 843 | RK1 "receptor kinase 1" [Arabi | 0.721 | 0.704 | 0.393 | 1.4e-163 | |
| TAIR|locus:2131694 | 815 | AT4G27300 [Arabidopsis thalian | 0.481 | 0.485 | 0.358 | 2.3e-152 | |
| TAIR|locus:2141176 | 849 | B120 [Arabidopsis thaliana (ta | 0.688 | 0.667 | 0.388 | 2.2e-148 | |
| TAIR|locus:2200908 | 842 | AT1G61610 [Arabidopsis thalian | 0.705 | 0.690 | 0.371 | 9.2e-139 | |
| TAIR|locus:2200888 | 804 | AT1G61500 [Arabidopsis thalian | 0.490 | 0.502 | 0.348 | 1.7e-137 | |
| TAIR|locus:2200151 | 830 | SD1-13 "S-domain-1 13" [Arabid | 0.718 | 0.712 | 0.360 | 4.7e-133 | |
| TAIR|locus:2093397 | 850 | CES101 "CALLUS EXPRESSION OF R | 0.479 | 0.464 | 0.311 | 1.9e-127 |
| TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1165 (415.2 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 257/647 (39%), Positives = 372/647 (57%)
Query: 17 MEILPCF-NIFSSLIFYWVIKF---SLAADTLTPTT--LIRDGETLVSPSQRFELGFFSP 70
M LP F + ++ F+ +I F S++A+TL+ + I T+VSP FELGFF P
Sbjct: 1 MRGLPNFYHSYTFFFFFLLILFPAYSISANTLSASESLTISSNNTIVSPGNVFELGFFKP 60
Query: 71 GKSQNRYVGIWYQQIPD-TVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNV 129
G Y+GIWY+ I T VWVANR++P+ G L +S+ NLV+L+QS+ +WS+N+
Sbjct: 61 GLDSRWYLGIWYKAISKRTYVWVANRDTPLSSSIGTLKISD-SNLVVLDQSDTPVWSTNL 119
Query: 130 SR-EVKNP-VAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLE 187
+ +V++P VA+LLDNGN V+RD+ S + + LWQSFD+PTDT+L MKLGWD +TG
Sbjct: 120 TGGDVRSPLVAELLDNGNFVLRDSKNS-APDGVLWQSFDFPTDTLLPEMKLGWDAKTGFN 178
Query: 188 RYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIF 247
R+ SWKS DDPS G+F+ +L+ P++ ++N ++ +GPWNG+ F P F +
Sbjct: 179 RFIRSWKSPDDPSSGDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEY 238
Query: 248 QPI-VVQNKDEVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-H 305
+K+EV Y + S + L ++ G +QR W E + W F+ AP C
Sbjct: 239 MVFNFTTSKEEVTYSFRITKSDVYSRLSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDE 298
Query: 306 YGDCGPNSICSVDQTSHCECLEGFKFKSQQ-------NQTCVRSHSSDCKSGDRFXXXXX 358
Y +CG C + + C C++GFK ++ Q + CVR C GD F
Sbjct: 299 YKECGVYGYCDSNTSPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKK 358
Query: 359 XXXXXXXXVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDN 418
S++ + +KECE +CL++C+C A+AN+ + GSGC+ W G+L D++ N
Sbjct: 359 MKLPDTTTASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIR---N 415
Query: 419 HTNG-VSIYIRVPASE---QGNKKXXXXXXXXXXXXXXXXXXYIARQWSRKRKEN---ET 471
+ G +Y+R+ A++ + N+ I W RK+K + ET
Sbjct: 416 YAKGGQDLYVRLAATDLEDKRNRSAKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIET 475
Query: 472 KNLD---TNQDLLAFDVNMGITTRTNEFCEAXXXXXXXXXXXXLPLFSFASVTAATENFS 528
+D ++DLL +V I++R + E LPL F V AT NFS
Sbjct: 476 PIVDHQLRSRDLLMNEVV--ISSRRHISRE------NNTDDLELPLMEFEEVAMATNNFS 527
Query: 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
+KLG+GGFG VYKG+LL+GQE+AVKRLS S QG EFKNE+ LIA+LQH NLVRLL
Sbjct: 528 NANKLGQGGFGIVYKGKLLDGQEMAVKRLSKTSVQGTDEFKNEVKLIARLQHINLVRLLA 587
Query: 589 CCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
CC++ GEK+LIYEY+ N SLD LFD ++ L WQ+R II+GIA+
Sbjct: 588 CCVDAGEKMLIYEYLENLSLDSHLFDKSRNSKLNWQMRFDIINGIAR 634
|
|
| TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 830 (297.2 bits), Expect = 9.5e-166, Sum P(3) = 9.5e-166
Identities = 170/428 (39%), Positives = 251/428 (58%)
Query: 24 NIFSSLIF--YWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIW 81
N+ LI + I + A D L ++DG+T+VS FE+GFFSPG S+NRY+GIW
Sbjct: 5 NVLHLLIISLFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIW 64
Query: 82 YQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVS-----REVKN 135
Y++I TVVWVANR+SP+ D +G L VS G+L L N N IWSS+ S ++N
Sbjct: 65 YKKISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRN 124
Query: 136 PVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKS 195
P+ Q+LD GNLV+R NSG + + Y+WQS DYP D L GMK G + TGL R+ TSW++
Sbjct: 125 PIVQILDTGNLVVR-NSGDD--QDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRA 181
Query: 196 ADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPS-NTTFIFQPIVVQN 254
DDPS GN+T+++D + +PQ + S TGPWNG+ F P+ I++ V
Sbjct: 182 IDDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYVFT 241
Query: 255 KDEVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNS 313
++EVYY Y+ + ++ +++NP G +QR W + W + +A C Y CG
Sbjct: 242 EEEVYYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYG 301
Query: 314 ICSVDQTSHCECLEGFKFKSQQ-------NQTCVRSHSSDCKSG-DRFXXXXXXXXXXXX 365
C+++++ C CL+GF K+ Q ++ CVR DC G D F
Sbjct: 302 SCNINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTR 361
Query: 366 XVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSI 425
+++M+L EC+ CL+NC+C AY+ + DGG GC++WFGDLID+++ + NG +
Sbjct: 362 TSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNE--NGQDL 419
Query: 426 YIRVPASE 433
Y+R+ +SE
Sbjct: 420 YVRLASSE 427
|
|
| TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1136 (405.0 bits), Expect = 2.5e-164, Sum P(2) = 2.5e-164
Identities = 250/634 (39%), Positives = 357/634 (56%)
Query: 23 FNIFSSLIFYWVIKFSLAADTLTPTT--LIRDGETLVSPSQRFELGFFSPGKSQNRYVGI 80
F +F ++F + FS+ A + T I +T++SPSQ FELGFF+P S Y+GI
Sbjct: 12 FILFIIILF---LAFSVYASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGI 68
Query: 81 WYQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSR-EVKNPVA 138
WY+ IP T VWVANR++P+ NG L +S+ NLV+ +QS+ +WS+N++ +V++PVA
Sbjct: 69 WYKIIPIRTYVWVANRDNPLSSSNGTLKISDN-NLVIFDQSDRPVWSTNITGGDVRSPVA 127
Query: 139 -QLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTG-LERYQTSWKSA 196
+LLD GN V+RD S +N +LWQSFD+PTDT+L MK+GWD ++G R SWK+
Sbjct: 128 AELLDYGNFVLRD-SKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTT 186
Query: 197 DDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIF-QPIVVQNK 255
DDPS G+F+ +L P+ +YN + +GPW G F S P + +N
Sbjct: 187 DDPSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENN 246
Query: 256 DEVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSI 314
+V Y Y + I IL ++ G +QRL W E + W+ + +P C +Y +CG
Sbjct: 247 QQVVYSYRVNKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGY 306
Query: 315 CSVDQTSHCECLEGFKFKSQQ------NQTCVRSHSSDCKSGDRFXXXXXXXXXXXXXVS 368
C + + C C++GF+ ++Q + CVR C D F S
Sbjct: 307 CDANTSPICNCIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETS 366
Query: 369 LNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNG-VSIYI 427
+++ + LKECE CLK C+C A+AN+ + +GGSGC++W G L D++ N+ G +Y+
Sbjct: 367 VDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIR---NYAKGGQDLYV 423
Query: 428 RVPASEQGNK--KXXXXXXXXXXXXXXXXXXYIARQ-WSRKRKENETKNLDTNQDLLAFD 484
RV A + +K K +I W RK+K + T + T D
Sbjct: 424 RVAAGDLEDKRIKSKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSIT--IQTP----IVD 477
Query: 485 VNMGITTRTNEFCEAXXXXXXXXXXXX---LPLFSFASVTAATENFSIQSKLGEGGFGPV 541
+ + NE +A LPL + ++ AT NFS +KLG+GGFG V
Sbjct: 478 LVRSQDSLMNELVKASRSYTSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIV 537
Query: 542 YKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601
YKG LL+G+E+AVKRLS S QG EF NE+ LIAKLQH NLVRLLGCC+++GEK+LIYE
Sbjct: 538 YKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYE 597
Query: 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
Y+ N SLD LFD T+ L WQ R II+GIA+
Sbjct: 598 YLENLSLDSHLFDQTRSSNLNWQKRFDIINGIAR 631
|
|
| TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1138 (405.7 bits), Expect = 1.4e-163, Sum P(2) = 1.4e-163
Identities = 250/636 (39%), Positives = 360/636 (56%)
Query: 23 FNIFSSLIFYWVIKFSLAADTLTPTT--LIRDGETLVSPSQRFELGFFSPGKSQNRYVGI 80
F IF LI + + FS++ +TL+ T I +T++SPSQ FELGFF+P S Y+GI
Sbjct: 11 FFIFLILILF--LAFSVSPNTLSATESLTISSNKTIISPSQIFELGFFNPASSSRWYLGI 68
Query: 81 WYQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSR-EVKNPVA 138
WY+ IP T VWVANR++P+ NG L +S NLV+ +QS+ +WS+N++ +V++PVA
Sbjct: 69 WYKIIPIRTYVWVANRDNPLSSSNGTLKISGN-NLVIFDQSDRPVWSTNITGGDVRSPVA 127
Query: 139 -QLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSAD 197
+LLDNGN ++RD S LWQSFD+PTDT+L MKLGWD +TG R SWK+ D
Sbjct: 128 AELLDNGNFLLRD-----SNNRLLWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTD 182
Query: 198 DPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPI-VVQNKD 256
DPS G F+ +L+ P+ + + + +GPWNG+ F S P + +K+
Sbjct: 183 DPSSGEFSTKLETSEFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTASKE 242
Query: 257 EVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGDCGPNSIC 315
EV Y Y + + L +N G +QRL W E + W+ + +P C +Y CG C
Sbjct: 243 EVTYSYRINKTNLYSRLYLNSAGLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYC 302
Query: 316 SVDQTSHCECLEGFKFKSQQ-------NQTCVRSHSSDCKSGDRFXXXXXXXXXXXXXVS 368
+ +C C++GFK ++Q + C+R C D F
Sbjct: 303 DSNSLPNCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATI 362
Query: 369 LNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNG-VSIYI 427
++ + LK C+ CL++C+C A+AN+ + +GGSGC++W +++D++ N+ G +Y+
Sbjct: 363 VDREIGLKVCKERCLEDCNCTAFANADIRNGGSGCVIWTREILDMR---NYAKGGQDLYV 419
Query: 428 RVPASEQGNKKXXXXXXXXXXXXXXXX---XXYIARQWSRKRKEN---ETKNLDT--NQD 479
R+ A+E +K+ I W RK+K + +T N+D +QD
Sbjct: 420 RLAAAELEDKRIKNEKIIGSSIGVSILLLLSFVIFHFWKRKQKRSITIQTPNVDQVRSQD 479
Query: 480 LLAFDVNMGITTRTNEFCEAXXXXXXXXXXXXLPLFSFASVTAATENFSIQSKLGEGGFG 539
L DV + +R LPL ++ AT NFS +KLG+GGFG
Sbjct: 480 SLINDV---VVSR-----RGYTSKEKKSEYLELPLLELEALATATNNFSNDNKLGQGGFG 531
Query: 540 PVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599
VYKGRLL+G+E+AVKRLS S QG EF NE+ LIAKLQH NLVRLLGCC+++GEK+LI
Sbjct: 532 IVYKGRLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLI 591
Query: 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
YEY+ N SLD LFD T+ L WQ R II+GIA+
Sbjct: 592 YEYLENLSLDSHLFDQTRSSNLNWQKRFDIINGIAR 627
|
|
| TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 684 (245.8 bits), Expect = 2.3e-152, Sum P(3) = 2.3e-152
Identities = 155/432 (35%), Positives = 239/432 (55%)
Query: 24 NIFSSLIFYWVIKFSLAAD--TLTPTTLIRDGETLVSPSQRFELGFFSPGKS---QNRYV 78
++FS +F S+A D +TP ++DG+TL SP Q F+LGFFS + Q+R++
Sbjct: 6 SLFSLSLFLISSSLSVALDYNVITPKEFLKDGDTLSSPDQVFQLGFFSLDQEEQPQHRFL 65
Query: 79 GIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSN-----VSREV 133
G+WY + P VVWVANRN+P+ +G L +S+ G+L L + + +WSS+ S+
Sbjct: 66 GLWYME-PFAVVWVANRNNPLYGTSGFLNLSSLGDLQLFDGEHKALWSSSSSSTKASKTA 124
Query: 134 KNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSW 193
NP+ ++ +GNL+ S+ E+ LWQSFDYP +T+L GMKLG + +T +E +SW
Sbjct: 125 NNPLLKISCSGNLI-----SSDGEEAVLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSW 179
Query: 194 KSADDPSPGNFTHRLDIHVLPQVCVY-NGSAKYTCT-GPWNGVAFGSAPS--NTTFIFQP 249
K+ DPSPG+FT LD LPQ+ + NG + Y+ G WNG++F AP+ +F
Sbjct: 180 KTLKDPSPGDFTLSLDTRGLPQLILRKNGDSSYSYRLGSWNGLSFTGAPAMGRENSLFDY 239
Query: 250 IVVQNKDEVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC-HYGD 308
+ EV Y + I+ L +N G++ R I + + W + TAP+ C +Y
Sbjct: 240 KFTSSAQEVNYSWTPRHR-IVSRLVLNNTGKLHRFIQSKQNQ-WILANTAPEDECDYYSI 297
Query: 309 CGPNSICSVDQ--TSHCECLEGFKFKSQQNQT-------CVRSHSSDCKSGDRFXXXXXX 359
CG ++C ++ T C CL+GFK KS + CV ++C+ D F
Sbjct: 298 CGAYAVCGINSKNTPSCSCLQGFKPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGL 357
Query: 360 XX--XXXXXVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTD 417
M L++C+ +C NCSC AYAN+ + +GG GCL+WFGDL+D+++
Sbjct: 358 KLPDTSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREYS 417
Query: 418 NHTNGVSIYIRV 429
+ G +YIR+
Sbjct: 418 SF--GQDVYIRM 427
|
|
| TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1009 (360.2 bits), Expect = 2.2e-148, Sum P(2) = 2.2e-148
Identities = 236/607 (38%), Positives = 341/607 (56%)
Query: 56 LVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVANRNSPIVDKNGVLTVSNRGNL 114
LVSP + FELGFFSPG S +R++GIWY I D VVWVANR +PI D++GVL +SN GNL
Sbjct: 44 LVSPQKTFELGFFSPGSSTHRFLGIWYGNIEDKAVVWVANRATPISDQSGVLMISNDGNL 103
Query: 115 VLLNQSNGTIWSSNVSREV---KNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDT 171
VLL+ N T+WSSN+ N V + D GN V+ + T+ +W+SF++PTDT
Sbjct: 104 VLLDGKNITVWSSNIESSTTNNNNRVVSIHDTGNFVLSETD----TDRPIWESFNHPTDT 159
Query: 172 MLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGS-AKYTCTGP 230
L M++ + +TG SW+S DPSPGN++ +D P++ ++ G+ + +G
Sbjct: 160 FLPQMRVRVNPQTGDNHAFVSWRSETDPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQ 219
Query: 231 WNGVAFGSAPSN---TTFIFQPIVVQNKDEVYYMYESY--SSPIIMI-LRVNPLGQVQRL 284
WN F P+ T +++ + DE +Y +Y S P +++ +V G + L
Sbjct: 220 WNSAIFTGIPNMSLLTNYLYGFKLSSPPDETGSVYFTYVPSDPSVLLRFKVLYNGTEEEL 279
Query: 285 IWHEMSTGWQVFFTAPDPFC-HYGDCGPNSICSVDQTSH-CECLEGFKFKSQQNQT--CV 340
W+E W F + PD C Y CG IC + ++ C C+ G++ S N + C
Sbjct: 280 RWNETLKKWTKFQSEPDSECDQYNRCGKFGICDMKGSNGICSCIHGYEQVSVGNWSRGCR 339
Query: 341 RSHSSDCKS----GDRFXXXXXXXXXXXXXVSLNESMNLKECEAECLKNCSCRAYANSKV 396
R C+ G+ + + ++ ++C CL+NCSC AY S V
Sbjct: 340 RRTPLKCERNISVGEDEFLTLKSVKLPDFEIPEHNLVDPEDCRERCLRNCSCNAY--SLV 397
Query: 397 TDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQG-NKKXXXXXXXXXXXXXXXXX 455
GG GC++W DL+DL++ + G S++IR+ SE G N+K
Sbjct: 398 --GGIGCMIWNQDLVDLQQFE--AGGSSLHIRLADSEVGENRKTKIAVIVAVLVGVILIG 453
Query: 456 XYIARQWSRKRKENET-----KNLDTNQDLLAFDVNMGITTRTNEFCEAXXXXXXXXX-- 508
+ W KRK++ + KN DT+ ++ D+ T T+ F +
Sbjct: 454 IFALLLWRFKRKKDVSGAYCGKNTDTS--VVVADLTKSKET-TSAFSGSVDIMIEGKAVN 510
Query: 509 XXXLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEF 568
LP+FS ++ AT +F +++LG GGFGPVYKG L +G+E+AVKRLS +SGQG+ EF
Sbjct: 511 TSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDEF 570
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR 628
KNE++LIAKLQHRNLVRLLGCC E EK+L+YEYM NKSLD FLFD TK+ L+ W+LR
Sbjct: 571 KNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLRFS 630
Query: 629 IIDGIAQ 635
II+GIA+
Sbjct: 631 IIEGIAR 637
|
|
| TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 958 (342.3 bits), Expect = 9.2e-139, Sum P(2) = 9.2e-139
Identities = 230/619 (37%), Positives = 326/619 (52%)
Query: 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQI-PDTVVWVANRNSPI 99
+++ T IR+G++L+S + FELGFF+P S RYVGIWY+ I P TVVWVANR P+
Sbjct: 29 SNSFTRNHTIREGDSLISEDESFELGFFTPKNSTLRYVGIWYKNIEPQTVVWVANREKPL 88
Query: 100 VDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTES 159
+D G L +++ GNLV++N N TIWS+NV E N VA L G+LV+ +S
Sbjct: 89 LDHKGALKIADDGNLVIVNGQNETIWSTNVEPESNNTVAVLFKTGDLVLCSDS---DRRK 145
Query: 160 YLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVY 219
+ W+SF+ PTDT L GM++ + G R WKS DPSPG ++ +D ++ ++
Sbjct: 146 WYWESFNNPTDTFLPGMRVRVNPSLGENRAFIPWKSESDPSPGKYSMGIDPVGALEIVIW 205
Query: 220 NGSAKYTCTGPWNGVAFGSAPSN---TTFI--FQPIVVQNKD-EVYYMYESYSSPIIMIL 273
G + +GPWN F P T +I F+ ++D VY+ Y + S +
Sbjct: 206 EGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYGFKLSSPPDRDGSVYFTYVASDSSDFLRF 265
Query: 274 RVNPLGQVQRLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNSICSVDQ---TSHCECLEGF 329
+ P G ++ W++ W + P C Y CG S+C + + C C++GF
Sbjct: 266 WIRPDGVEEQFRWNKDIRNWNLLQWKPSTECEKYNRCGNYSVCDDSKEFDSGKCSCIDGF 325
Query: 330 K--FKSQQNQT-----CVRSHSSDCKSG------DRFXXXXXXXXXXXXXVSLNESMNLK 376
+ + Q N C R +C D F V L+ N +
Sbjct: 326 EPVHQDQWNNRDFSGGCQRRVPLNCNQSLVAGQEDGFTVLKGIKVPDFGSVVLHN--NSE 383
Query: 377 ECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIRVPASEQGN 436
C+ C ++CSC+AYA V G GC++W DLID++ + G SI IR+ S+ G
Sbjct: 384 TCKDVCARDCSCKAYA--LVV--GIGCMIWTRDLIDMEHFER--GGNSINIRLAGSKLGG 437
Query: 437 KKXXXXXXXXXXXXXXXXXXYIARQWSRKRKENETKNLDTNQDLLAFDVNMGITTRTNEF 496
K + K K++ L +D+ D+ I R
Sbjct: 438 GKENSTLWIIVFSVIGAFLLGLCIWILWKFKKSLKAFLWKKKDITVSDI---IENRDYSS 494
Query: 497 CEAXXXXXXXXXXXXLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKR 556
LP+FSF SV +AT +F+ ++KLG+GGFG VYKG G+E+AVKR
Sbjct: 495 SPIKVLVGDQVDTPDLPIFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGREIAVKR 554
Query: 557 LSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPT 616
LS +S QGL+EFKNE++LIAKLQHRNLVRLLGCCIE EK+L+YEYM NKSLD FLFD +
Sbjct: 555 LSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDES 614
Query: 617 KKHLLGWQLRVRIIDGIAQ 635
K+ L W+ R +I GIA+
Sbjct: 615 KQGSLDWRKRWEVIGGIAR 633
|
|
| TAIR|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 606 (218.4 bits), Expect = 1.7e-137, Sum P(3) = 1.7e-137
Identities = 150/431 (34%), Positives = 220/431 (51%)
Query: 22 CFNIFSSLIFYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIW 81
C ++F+ +F ++ S +A +T + + G+TL S ++ +ELGFFSP +Q++YVGIW
Sbjct: 7 CLHLFTMFLFT-LLSGSSSA-VITTESPLSMGQTLSSANEVYELGFFSPNNTQDQYVGIW 64
Query: 82 YQQ-IPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQL 140
++ IP VVWVANR P+ D L +S+ G+L+LLN +GT+WSS V+ A+L
Sbjct: 65 FKDTIPRVVVWVANREKPVTDSTAYLAISSSGSLLLLNGKHGTVWSSGVTFSSSGCRAEL 124
Query: 141 LDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPS 200
D+GNL + DN +E LWQSFD+ DT+L L ++L T +R TSWKS DPS
Sbjct: 125 SDSGNLKVIDNV----SERALWQSFDHLGDTLLHTSSLTYNLATAEKRVLTSWKSYTDPS 180
Query: 201 PGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTFIFQPIVVQNKDEVYY 260
PG+F ++ V Q V GS Y +GPW F P P + ++D
Sbjct: 181 PGDFLGQITPQVPSQGFVMRGSTPYWRSGPWAKTRFTGIPFMDESYTGPFTL-HQDVNGS 239
Query: 261 MYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNSICSVDQ 319
Y +Y + R+ + ++ + GW++++ AP C YG CGP +C +
Sbjct: 240 GYLTYFQRDYKLSRITLTSEGSIKMFRDNGMGWELYYEAPKKLCDFYGACGPFGLCVMSP 299
Query: 320 TSHCECLEGFKFKSQQ-----NQT--CVRSHSSDC---KSG-DRFXXXXXXXXXXXXXVS 368
+ C+C GF KS + N T CVR DC +G D
Sbjct: 300 SPMCKCFRGFVPKSVEEWKRGNWTGGCVRHTELDCLGNSTGEDADDFHQIANIKPPDFYE 359
Query: 369 LNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHTNGVSIYIR 428
S+N +EC C+ NCSC A+A K G GCL+W DL+D + G + IR
Sbjct: 360 FASSVNAEECHQRCVHNCSCLAFAYIK----GIGCLVWNQDLMDAVQFS--ATGELLSIR 413
Query: 429 VPASE-QGNKK 438
+ SE GNK+
Sbjct: 414 LARSELDGNKR 424
|
|
| TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 920 (328.9 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 231/641 (36%), Positives = 326/641 (50%)
Query: 22 CFNIFSSLIFYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIW 81
C I + + ++ LA D +T ++ RD ET+VS F GFFSP S RY GIW
Sbjct: 3 CLLILLLTLICFSLRLCLATDVITFSSEFRDSETVVSNHSTFRFGFFSPVNSTGRYAGIW 62
Query: 82 YQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVK-NPV-A 138
+ IP TVVWVAN NSPI D +G++++S GNLV+++ WS+NV V N A
Sbjct: 63 FNNIPVQTVVWVANSNSPINDSSGMVSISKEGNLVVMDGRGQVHWSTNVLVPVAANTFYA 122
Query: 139 QLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADD 198
+LL+ GNLV+ + N+ + LW+SF++P + L M L D +TG SWKS D
Sbjct: 123 RLLNTGNLVLLGTT--NTGDEILWESFEHPQNIYLPTMSLATDTKTGRSLKLRSWKSPFD 180
Query: 199 PSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNTTF---IFQ-PIVVQN 254
PSPG ++ L P++ V+ +GPWNG F P N + +F+ + N
Sbjct: 181 PSPGRYSAGLIPLPFPELVVWKDDLLMWRSGPWNGQYFIGLP-NMDYRINLFELTLSSDN 239
Query: 255 KDEVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNS 313
+ V Y + ++ ++ G V + W+ W+ + P C Y CG +
Sbjct: 240 RGSVSMSYAG--NTLLYHFLLDSEGSVFQRDWNVAIQEWKTWLKVPSTKCDTYATCGQFA 297
Query: 314 ICSVD--QTSHCECLEGFKFKS--QQN-----QTCVRSHSSDCKSGDRFXXXXXXXXXXX 364
C + T C C+ GFK +S + N Q CVR C+S D
Sbjct: 298 SCRFNPGSTPPCMCIRGFKPQSYAEWNNGNWTQGCVRKAPLQCESRDNNDGSRKSDGFVR 357
Query: 365 XX---VSLN---ESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDN 418
V N N ++C CLKNCSC AY+ D G GCL+W G+L+D+++
Sbjct: 358 VQKMKVPHNPQRSGANEQDCPESCLKNCSCTAYS----FDRGIGCLLWSGNLMDMQEFSG 413
Query: 419 HTNGVSIYIRVPASE--QGNKKXXXXXXXXXXXXXXXXXXYIARQW--SRKRKENETKNL 474
GV YIR+ SE + + + W ++ R++N L
Sbjct: 414 --TGVVFYIRLADSEFKKRTNRSIVITVTLLVGAFLFAGTVVLALWKIAKHREKNRNTRL 471
Query: 475 DTNQDLLAFDVNMGITTRTNEFCEAXXXXXXXXXXXXLPLFSFASVTAATENFSIQSKLG 534
N+ + A N N++ LPLF F + AT NFSI +KLG
Sbjct: 472 -LNERMEALSSNDVGAILVNQY-----------KLKELPLFEFQVLAVATNNFSITNKLG 519
Query: 535 EGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG 594
+GGFG VYKGRL G ++AVKRLS SGQG++EF NE+++I+KLQHRNLVRLLG CIE
Sbjct: 520 QGGFGAVYKGRLQEGLDIAVKRLSRTSGQGVEEFVNEVVVISKLQHRNLVRLLGFCIEGE 579
Query: 595 EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
E++L+YE+M LD +LFDP K+ LL W+ R IIDGI +
Sbjct: 580 ERMLVYEFMPENCLDAYLFDPVKQRLLDWKTRFNIIDGICR 620
|
|
| TAIR|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 471 (170.9 bits), Expect = 1.9e-127, Sum P(3) = 1.9e-127
Identities = 133/427 (31%), Positives = 217/427 (50%)
Query: 25 IFSSLI-FYWVIKFSLA-ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWY 82
IF +L FY + S DTL ++DG+ LVS F+L FF+ S N Y+GIWY
Sbjct: 6 IFLTLFTFYLFLGQSCCQTDTLLQGQYLKDGQELVSAFNIFKLKFFNFENSSNWYLGIWY 65
Query: 83 QQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLL 141
VW+ANRN+P++ ++G LTV + G L +L ++ + S+ + N +LL
Sbjct: 66 NNFYLSGAVWIANRNNPVLGRSGSLTVDSLGRLRILRGASSLLELSS-TETTGNTTLKLL 124
Query: 142 DNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQ-TSWKSADDPS 200
D+GNL +++ S + LWQSFDYPTDT+L GMKLG++++TG +R++ TSW P+
Sbjct: 125 DSGNLQLQEMDSDGSMKRTLWQSFDYPTDTLLPGMKLGFNVKTG-KRWELTSWLGDTLPA 183
Query: 201 PGNFTHRLDIHVLPQVCV-YNGSAKYTCTGPWNGVAFGSAPSNTT-FIFQPIVVQNKDEV 258
G+F +D ++ ++ + + G+ Y +G W F NT FIF V + E
Sbjct: 184 SGSFVFGMDDNITNRLTILWLGNV-YWASGLWFKGGFSLEKLNTNGFIFS--FVSTESEH 240
Query: 259 YYMY---ESYSSPIIMILRVNPLGQVQRL----IWHEMSTGWQVFFTAPDPFCH---YGD 308
Y+MY E+Y P+ +R++ G +Q++ + + VF + C+ + +
Sbjct: 241 YFMYSGDENYGGPLFPRIRIDQQGSLQKINLDGVKKHVHCSPSVFGEELEYGCYQQNFRN 300
Query: 309 CGPNSICSVDQTSHCECLEGFKFKSQQNQTCVRSHSSDCKSGDRFXXXXXXXXXXXXXVS 368
C P V + C GF + + +T S+ S + G F +
Sbjct: 301 CVPARYKEVTGSWDCSPF-GFGY-TYTRKTYDLSYCS--RFGYTFRETVSPSAENGFVFN 356
Query: 369 -LNESMNLKECEAECLKNCSCRAYANSKVTDG-GSGCLMWFGDLIDLKKTDNHTNGVSIY 426
+ ++ +C +CL+NCSC AYA+ T+G G+GC +W D + +H +IY
Sbjct: 357 EIGRRLSSYDCYVKCLQNCSCVAYAS---TNGDGTGCEIWNTDPTNENSASHHPR--TIY 411
Query: 427 IRVPASE 433
IR+ S+
Sbjct: 412 IRIKGSK 418
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O81905 | SD18_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.4231 | 0.9404 | 0.9105 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.914 |
| 3rd Layer | 2.7.11 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 823 | |||
| pfam01453 | 109 | pfam01453, B_lectin, D-mannose binding lectin | 2e-40 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-40 | |
| cd00028 | 116 | cd00028, B_lectin, Bulb-type mannose-specific lect | 3e-40 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 3e-40 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-39 | |
| smart00108 | 114 | smart00108, B_lectin, Bulb-type mannose-specific l | 6e-38 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 8e-38 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 7e-34 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 3e-29 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-27 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-26 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 4e-26 | |
| pfam08276 | 66 | pfam08276, PAN_2, PAN-like domain | 7e-26 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-23 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 8e-23 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-22 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 4e-22 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 4e-21 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 5e-21 | |
| cd01098 | 84 | cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain | 6e-21 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 4e-20 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 7e-20 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-19 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-19 | |
| pfam00954 | 110 | pfam00954, S_locus_glycop, S-locus glycoprotein fa | 7e-19 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 8e-19 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 9e-19 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 1e-18 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 3e-18 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 5e-18 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 5e-18 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-17 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-17 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-17 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 5e-17 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 8e-17 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-16 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-16 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-16 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-16 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 3e-16 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-16 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 9e-16 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 1e-15 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 1e-15 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-15 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 2e-15 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 3e-15 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 4e-15 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 4e-15 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 6e-15 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 6e-15 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 9e-15 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 3e-14 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-14 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-14 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 7e-14 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 8e-14 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 1e-13 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-13 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 2e-13 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 3e-13 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-13 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 5e-13 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 5e-13 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 5e-13 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 5e-13 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 6e-13 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 6e-13 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 7e-13 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 1e-12 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-12 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-12 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 3e-12 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 3e-12 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 4e-12 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-12 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 4e-12 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 4e-12 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 6e-12 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 1e-11 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-11 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 2e-11 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 3e-11 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 4e-11 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 5e-11 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 5e-11 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 5e-11 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 5e-11 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 5e-11 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 5e-11 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 1e-10 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 1e-10 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 1e-10 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-10 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 1e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-10 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 2e-10 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 3e-10 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 3e-10 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 4e-10 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 4e-10 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 5e-10 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 6e-10 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-09 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 1e-09 | |
| smart00473 | 78 | smart00473, PAN_AP, divergent subfamily of APPLE d | 2e-09 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-09 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 2e-09 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 2e-09 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 2e-09 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 3e-09 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 4e-09 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 4e-09 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 4e-09 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 5e-09 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 5e-09 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 5e-09 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 5e-09 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 5e-09 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 8e-09 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 1e-08 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 2e-08 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 2e-08 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 2e-08 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 3e-08 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 3e-08 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 4e-08 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 5e-08 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 5e-08 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 5e-08 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 5e-08 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 5e-08 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 6e-08 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 7e-08 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 7e-08 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 7e-08 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 8e-08 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 8e-08 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 1e-07 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 1e-07 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 1e-07 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 1e-07 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-07 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 2e-07 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-07 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 4e-07 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 4e-07 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 5e-07 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 7e-07 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 7e-07 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 7e-07 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 8e-07 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 8e-07 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 9e-07 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-06 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 1e-06 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 1e-06 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 1e-06 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-06 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 2e-06 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 3e-06 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 4e-06 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 5e-06 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 8e-06 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 9e-06 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 1e-05 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 2e-05 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 2e-05 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-05 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-05 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 3e-05 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 4e-05 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 8e-05 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 8e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-04 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 1e-04 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 1e-04 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 1e-04 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 2e-04 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-04 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 2e-04 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 2e-04 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 3e-04 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 3e-04 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 3e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 3e-04 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 3e-04 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 3e-04 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 3e-04 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 4e-04 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 4e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-04 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 5e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 5e-04 | |
| pfam11883 | 48 | pfam11883, DUF3403, Domain of unknown function (DU | 6e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 6e-04 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 7e-04 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 8e-04 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 0.001 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 0.001 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 0.001 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 0.001 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 0.001 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 0.002 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 0.002 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 0.002 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 0.002 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 0.002 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 0.003 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.003 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 0.003 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 0.003 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 0.003 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 0.003 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 0.003 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 0.004 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 0.004 |
| >gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin | Back alignment and domain information |
|---|
Score = 144 bits (364), Expect = 2e-40
Identities = 57/115 (49%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 86 PDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGN 145
TVVWVANR +P+ D + L + + GNLVL + + +WSSN S + VA L D+GN
Sbjct: 1 NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGN 60
Query: 146 LVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPS 200
LV+ DNSG LWQSFD+PTDT+L G K G ++ G R TSWKS DPS
Sbjct: 61 LVLYDNSG-----KVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109
|
These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 148 bits (377), Expect = 3e-40
Identities = 81/277 (29%), Positives = 126/277 (45%), Gaps = 53/277 (19%)
Query: 528 SIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHR 581
++ KLGEG FG VYKG+L EVAVK L + S Q ++EF E ++ KL H
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------ 635
N+V+LLG C E+ ++ EYM L +L + L + IA+
Sbjct: 62 NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL--RKNRPKLSLSDLLSFALQIARGMEYLE 119
Query: 636 ----------------DQHMNPKISDFGMARMFGGDEL--QGNTKRIVGTYGYMSPEYAL 677
+++ KISDFG++R D+ + K + +M+PE
Sbjct: 120 SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPI---RWMAPESLK 176
Query: 678 EGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735
EG F+ KSDV+SFGVL+ EI + + G+ N + L + + L + +
Sbjct: 177 EGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPPEL---- 232
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
++ L C E+ EDRPT S++V ++
Sbjct: 233 ------------YDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 3e-40
Identities = 54/120 (45%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTV 108
+ G+TLVS FELGFF Y I Y+ TVVWVANR++P + LT+
Sbjct: 3 PLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNP-SGSSCTLTL 61
Query: 109 SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYP 168
+ GNLV+ + S +WSSN +R N V LLD+GNLV+ D+ G ++LWQSFDYP
Sbjct: 62 QSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSDG-----NFLWQSFDYP 116
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 3e-40
Identities = 81/276 (29%), Positives = 125/276 (45%), Gaps = 50/276 (18%)
Query: 528 SIQSKLGEGGFGPVYKGRLLNG-----QEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHR 581
++ KLGEG FG VYKG L EVAVK L + S Q ++EF E ++ KL H
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------ 635
N+V+LLG C E+ +++ EYM L +L + L + IA+
Sbjct: 62 NIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRK-NRPKELSLSDLLSFALQIARGMEYLE 120
Query: 636 ----------------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGTYGYMSPEYALE 678
+++ KISDFG++R ++ D + ++ +M+PE E
Sbjct: 121 SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKL--PIRWMAPESLKE 178
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
G F+ KSDV+SFGVL+ EI + + G+ N + L + L K +
Sbjct: 179 GKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPPEL----- 233
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ L C E+ EDRPT S++V ++
Sbjct: 234 -----------YKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 3e-39
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 53/277 (19%)
Query: 532 KLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
KLGEG FG VYKG+L EVAVK L S + K+F E ++ KL H N+VRL
Sbjct: 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRL 61
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQLRVRIIDGIAQ----- 635
LG C E+ L+ EYM L +L F +K L + + IA+
Sbjct: 62 LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121
Query: 636 -----------------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ + KISDFG++R ++ D + T + +M+PE
Sbjct: 122 ASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR-WMAPESLK 180
Query: 678 EGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735
+G+F+ KSDV+SFGVL+ EI + + G+ N + L + L K + + +
Sbjct: 181 DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDEL---- 236
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
Y + L C Q + EDRPT S++V +
Sbjct: 237 -----------Y-ELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 6e-38
Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTV 108
+ G+TLVS + FELGFF+ QN Y I Y+ TVVWVANR++P V + LT+
Sbjct: 3 TLSSGQTLVSGNSLFELGFFTLI-MQNDYNLILYKSSSRTVVWVANRDNP-VSDSCTLTL 60
Query: 109 SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDY 167
+ GNLVL + +WSSN + N V LLD+GNLVI D+ G ++LWQSFDY
Sbjct: 61 QSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDSDG-----NFLWQSFDY 114
|
Length = 114 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 141 bits (359), Expect = 8e-38
Identities = 82/281 (29%), Positives = 124/281 (44%), Gaps = 58/281 (20%)
Query: 527 FSIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQH 580
+ KLGEG FG VYKG L +VAVK L + + +EF E ++ KL H
Sbjct: 1 LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
N+VRLLG C + ++ EYM L FL L + +++ IA+
Sbjct: 61 PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFL--RKHGEKLTLKDLLQMALQIAKGMEYL 118
Query: 636 -----------------DQHMNPKISDFGMARMFGGDE---LQGNTKRIVGTYGYMSPEY 675
+++ KISDFG++R D+ +G K + +M+PE
Sbjct: 119 ESKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPI---KWMAPES 175
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA-WSLCKNDRAHELMD-- 732
+G F+ KSDV+SFGVL+ EI + LG + N+ EL++
Sbjct: 176 LKDGKFTSKSDVWSFGVLLWEIFT---------------LGEQPYPGMSNEEVLELLEDG 220
Query: 733 -PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ + E L Y + L C + EDRPT S++V +
Sbjct: 221 YRLPRPENCPDEL--Y-ELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 7e-34
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 30/191 (15%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVRLLGCC 590
LGEGGFG VY R G++VA+K + + L E E+ ++ KL H N+V+L G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 591 IEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------------- 635
++ L+ EY SL L + K L +RI+ I +
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGK--LSEDEILRILLQILEGLEYLHSNGIIHRDL 118
Query: 636 --------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSD 686
+ K++DFG++++ D+ T IVGT YM+PE L +S KSD
Sbjct: 119 KPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT--IVGTPAYMAPEVLLGKGYYSEKSD 176
Query: 687 VFSFGVLMLEI 697
++S GV++ E+
Sbjct: 177 IWSLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 3e-29
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 32/200 (16%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLV 584
+ I KLGEG FG VY R G+ VA+K + + + +E E+ ++ KL+H N+V
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL-----FDPTKKHLLGWQLRVRIIDGIAQ---- 635
RL ++ + L+ EY L L + Q I+ +
Sbjct: 61 RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQ----ILSALEYLHSK 116
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
D+ + K++DFG+AR E VGT YM+PE L +
Sbjct: 117 GIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEK---LTTFVGTPEYMAPEVLLGKGY 173
Query: 682 SVKSDVFSFGVLMLEILSSK 701
D++S GV++ E+L+ K
Sbjct: 174 GKAVDIWSLGVILYELLTGK 193
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 2e-27
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHRNL 583
+ + KLG G FG VYK + G+ VAVK L ++ + + + E+ ++ +L H N+
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
VRL+ ++ L+ EY L +L ++ L +I I +
Sbjct: 61 VRLIDAFEDKDHLYLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLHSN 117
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG-V 680
D++ KI+DFG+A+ + VGT YM+PE L G
Sbjct: 118 GIIHRDLKPENILLDENGVVKIADFGLAKKLLKS--SSSLTTFVGTPWYMAPEVLLGGNG 175
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+ K DV+S GV++ E+L+ K
Sbjct: 176 YGPKVDVWSLGVILYELLTGK 196
|
Length = 260 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 31/200 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E F+++ KLG G FG V++G N VA+K L + ++F+ E+ + +L+H++L+
Sbjct: 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI 65
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK-----HLL--GWQLRVRIIDGIA--Q 635
L C +I E M SL FL P + L+ Q + +G+A +
Sbjct: 66 SLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQ----VAEGMAYLE 121
Query: 636 DQH----------------MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
+Q+ + K++DFG+AR+ D + K+I Y + +PE A G
Sbjct: 122 EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYKWTAPEAASHG 179
Query: 680 VFSVKSDVFSFGVLMLEILS 699
FS KSDV+SFG+L+ E+ +
Sbjct: 180 TFSTKSDVWSFGILLYEMFT 199
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 4e-26
Identities = 68/198 (34%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG G FG V+ G +VAVK L + F E ++ KL+H LV
Sbjct: 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLV 64
Query: 585 RLLGCCIEQGEKILIY-EYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMN 640
+L C + E I I EYM SL FL K L QL +I +G+A + N
Sbjct: 65 QLYAVC-SEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN 123
Query: 641 ------------------PKISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEG 679
KI+DFG+AR+ DE +G I T +PE A G
Sbjct: 124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWT----APEAANYG 179
Query: 680 VFSVKSDVFSFGVLMLEI 697
F++KSDV+SFG+L+ EI
Sbjct: 180 RFTIKSDVWSFGILLTEI 197
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 7e-26
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 347 CKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMW 406
C GD F +L ++KLPD ++ S+ LKECE CL NCSC AYA + + GGSGCL+W
Sbjct: 1 CGGGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIR-GGSGCLIW 59
Query: 407 FGDLIDL 413
G+L+D+
Sbjct: 60 TGELVDM 66
|
Length = 66 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 4e-23
Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 65/271 (23%)
Query: 532 KLGEGGFGPVYKGRLL-NGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
LG G FG VY G+ +AVK LS S + L+ + E+ +++ LQH N+VR G
Sbjct: 7 LLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYG 66
Query: 589 CCIEQGEK-ILIY-EYMVNKSLDVFL--FDP---------TKKHLLGWQLRV----RII- 630
++ + + I+ EY+ SL L F T++ L G L I+
Sbjct: 67 SERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEG--LAYLHSNGIVH 124
Query: 631 ------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
DG+ K++DFG A+ G E T + GT +M+PE
Sbjct: 125 RDIKGANILVDSDGVV-------KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG 177
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
+ +D++S G ++E+ + K WS N + + +
Sbjct: 178 EEYGRAADIWSLGCTVIEMATGK---------------PPWSELGN--PMAALYKIGSSG 220
Query: 739 VSLPMLVRYI-----NVALLCVQENAEDRPT 764
P + ++ + C++ + + RPT
Sbjct: 221 -EPPEIPEHLSEEAKDFLRKCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 99.1 bits (247), Expect = 8e-23
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 44/210 (20%)
Query: 533 LGEGGFGPVYKGRL--LNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
LGEG FG VYKG L N + VA+K L N + +EF+ E L++ LQH N+V
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFLF-------------DPTKKHLLGWQLRVRIIDG 632
LLG C ++ +++EY+ + L FL D T K L + I
Sbjct: 73 LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQ 132
Query: 633 IAQ----------------------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGTYG 669
IA + + KISDFG++R ++ D + +K ++
Sbjct: 133 IAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVR- 191
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M PE L G F+ +SD++SFGV++ EI S
Sbjct: 192 WMPPEAILYGKFTTESDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 1e-22
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 51/279 (18%)
Query: 531 SKLGEGGFGPVYKGRLLN-----GQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRNLV 584
+LGEG FG V R G++VAVK L+ + Q +F+ E+ ++ L H N+V
Sbjct: 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69
Query: 585 RLLGCCIEQGEKI--LIYEYMVNKSLDVFLFDPTKKHLLGWQLR--VRIIDGIA--QDQH 638
+ G C + G + LI EY+ + SL +L + L L +I G+ Q
Sbjct: 70 KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR 129
Query: 639 M----------------NPKISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEYALEGV 680
KISDFG+A++ D + Y +PE
Sbjct: 130 YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-APECLRTSK 188
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740
FS SDV+SFGV + E+ + + + ++G A + + +L+
Sbjct: 189 FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA----QGQMIVTRLLELLKEGER 244
Query: 741 LP----------MLVRYINVALLCVQENAEDRPTMSDVV 769
LP L++ LC + +DRP+ +D++
Sbjct: 245 LPRPPSCPDEVYDLMK------LCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 4e-22
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 33/196 (16%)
Query: 533 LGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + VA+K L ++ + KE +E ++A + H ++VRL
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 587 LGCCIEQGEKI-LIYEYMVNKSLDVFLFDPT----KKHLLGWQLRVRIIDGIA--QDQHM 639
LG C+ ++ LI + M L ++ + ++LL W V+I G++ +++ +
Sbjct: 75 LGICL--SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWC--VQIAKGMSYLEEKRL 130
Query: 640 -------------NP---KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
P KI+DFG+A++ DE + + + +M+ E L +++
Sbjct: 131 VHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTH 190
Query: 684 KSDVFSFGVLMLEILS 699
KSDV+S+GV + E+++
Sbjct: 191 KSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 4e-21
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 62/293 (21%)
Query: 523 ATENFSIQSKLGEGGFGPVYKG--RLLNG----QEVAVKRL-SNQSGQGLKEFKNEMMLI 575
++ ++ LG G FG VY+G R +G +VAVK L + S Q +F E +++
Sbjct: 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIM 63
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
+K H+N+VRL+G E+ + ++ E M L FL + + L ++ + A+
Sbjct: 64 SKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123
Query: 636 D-----QHMNP------------------------KISDFGMAR-MFGGDELQGNTKRIV 665
D +++ KI+DFGMAR ++ + + ++
Sbjct: 124 DVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAML 183
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725
+M PE L+G+F+ K+DV+SFGVL+ EI S LG+ + +
Sbjct: 184 -PIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS---------------LGYMPYPGRTN 227
Query: 726 RAHELMDPV-----LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773
+ E+M+ V L P + C Q EDRP + ++ I
Sbjct: 228 Q--EVMEFVTGGGRLDPPKGCP--GPVYRIMTDCWQHTPEDRPNFATILERIQ 276
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 5e-21
Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 52/216 (24%)
Query: 533 LGEGGFGPVYKGRLLNGQE------VAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVR 585
LGEG FG V+ G + + VAVK L + ++ F+ E L+ QH N+V+
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFL-----------------FDPTKKHLLGWQLRVR 628
G C E I+++EYM + L+ FL + T LL Q+ V+
Sbjct: 73 FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLL--QIAVQ 130
Query: 629 IIDGIA--QDQH----------------MNPKISDFGMARMFGGDELQGNTKRIVGT--- 667
I G+ QH + KI DFGM+R D + R+ G
Sbjct: 131 IASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR----DVYTTDYYRVGGHTML 186
Query: 668 -YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKK 702
+M PE + F+ +SDV+SFGV++ EI + K
Sbjct: 187 PIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 6e-21
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 343 HSSDCKSG---DRFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDG 399
+C D F KL D+KLPD ++ +++L+EC CL NCSC AYA +G
Sbjct: 1 TPLNCGGDGSTDGFLKLPDVKLPDN-ASAIT-AISLEECREACLSNCSCTAYAY---NNG 55
Query: 400 GSGCLMWFGDLIDLKKTDNHTNGVSIYIRVP 430
GCL+W G L +L+ + G ++Y+R+
Sbjct: 56 SGGCLLWNGLLNNLRSLSS--GGGTLYLRLA 84
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 90.4 bits (224), Expect = 4e-20
Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 54/242 (22%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
++G G FG V+ G L ++VA+K + + ++F E ++ KL H LV+L G C
Sbjct: 11 EIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69
Query: 592 EQGEKILIYEYMVNKSLDVFLFDP----TKKHLLGWQLRVRIIDGIAQDQHMN------- 640
E+ L++E+M + L +L +++ LLG L V +G+A + N
Sbjct: 70 ERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDV--CEGMAYLESSNVIHRDLA 127
Query: 641 -----------PKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALEGVFSVKSD 686
K+SDFGM R D+ +T GT + SPE +S KSD
Sbjct: 128 ARNCLVGENQVVKVSDFGMTRFVLDDQYTSST----GTKFPVKWSSPEVFSFSKYSSKSD 183
Query: 687 VFSFGVLMLEILSSKK---------------NTG-------VYNTDSFNLLGHAWSLCKN 724
V+SFGVLM E+ S K N G + + + L+ H W
Sbjct: 184 VWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPE 243
Query: 725 DR 726
DR
Sbjct: 244 DR 245
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 7e-20
Identities = 70/264 (26%), Positives = 104/264 (39%), Gaps = 44/264 (16%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE 592
LG G FG V+ G+ +VA+K + + +F E ++ KL H NLV+L G C +
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMI-REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70
Query: 593 QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV--RIIDGIAQDQHMN---------- 640
Q ++ EYM N L +L + K W L + + + + +
Sbjct: 71 QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARN 130
Query: 641 --------PKISDFGMARMFGGDEL--QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSF 690
K+SDFG+AR D+ TK V + PE FS KSDV+SF
Sbjct: 131 CLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPV---KWAPPEVFDYSRFSSKSDVWSF 187
Query: 691 GVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYI 748
GVLM E+ S K N++ + + L R V
Sbjct: 188 GVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL---YRPKLAPTEVYT------------ 232
Query: 749 NVALLCVQENAEDRPTMSDVVSMI 772
+ C E EDRP ++S +
Sbjct: 233 -IMYSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 88.4 bits (219), Expect = 2e-19
Identities = 79/277 (28%), Positives = 121/277 (43%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + KLG G FG V+ G +VA+K L Q + F E L+ +LQH LV
Sbjct: 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLV 64
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
RL + Q +I EYM N SL FL P L +L +I +G+A + N
Sbjct: 65 RLYAV-VTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY 123
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
KI+DFG+AR+ +E +G I T +PE G
Sbjct: 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGT 179
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + ++ EL +
Sbjct: 180 FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYE----- 234
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ LC +E E+RPT + S++ +
Sbjct: 235 ------------LMRLCWKEKPEERPTFEYLRSVLED 259
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 4e-19
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 47/265 (17%)
Query: 526 NFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLS--NQSGQGLKEFKNEMMLIAKLQHRN 582
N+ + +G G FG VYKG L G VA+K++S + LK E+ L+ L+H N
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL--FDPTKKHLLGWQLRVRIIDGIA--QDQ- 637
+V+ +G +I EY N SL + F P + L+ + +++ G+A +Q
Sbjct: 61 IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVY-QVLQGLAYLHEQG 119
Query: 638 --HM-------------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE-YALEGVF 681
H K++DFG+A + +VGT +M+PE + G
Sbjct: 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS--VVGTPYWMAPEVIEMSGA- 176
Query: 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA--WSLCKNDRAHELMDPVLQNEV 739
S SD++S G ++E+L TG N ++L A + + ++D P L +
Sbjct: 177 STASDIWSLGCTVIELL-----TG--NPPYYDLNPMAALFRIVQDDH------PPLPEGI 223
Query: 740 SLPMLVRYINVALLCVQENAEDRPT 764
S + + + C Q++ RPT
Sbjct: 224 SPELK----DFLMQCFQKDPNLRPT 244
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 7e-19
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 228 TGPWNGVAFGSAP-----SNTTFIFQPIVVQNKDEVYYMYESYSSPIIMILRVNPLGQVQ 282
+GPWNG+ F P S + F +N +EVYY Y ++ I L ++ G ++
Sbjct: 3 SGPWNGIRFSGIPEMQKLSYYVYNF----TENNEEVYYTYRMTNNSIYSRLTLSSEGSLE 58
Query: 283 RLIWHEMSTGWQVFFTAPDPFCH-YGDCGPNSICSVDQTSHCECLEGFKFKS 333
R W S W +F++AP C YG CGP C V+ + C C++GF K+
Sbjct: 59 RFTWIPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGFVPKN 110
|
In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 8e-19
Identities = 64/199 (32%), Positives = 92/199 (46%), Gaps = 33/199 (16%)
Query: 528 SIQ--SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
SIQ KLG G FG V++G N VAVK L + K+F E ++ KL+H L++
Sbjct: 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQ 65
Query: 586 LLGCCIEQGEKILIY-EYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMN- 640
L C E I I E M SL +L + L QL ++ G+A + N
Sbjct: 66 LYAVCT-LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY 124
Query: 641 -----------------PKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALEGV 680
K++DFG+AR+ D + G + +PE AL
Sbjct: 125 IHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE----GAKFPIKWTAPEAALYNR 180
Query: 681 FSVKSDVFSFGVLMLEILS 699
FS+KSDV+SFG+L+ EI++
Sbjct: 181 FSIKSDVWSFGILLTEIVT 199
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 9e-19
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 49/277 (17%)
Query: 528 SIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
+I+ +G G FG V +GRL L G++ VA+K L S + +F E ++ + H N
Sbjct: 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPN 66
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
++RL G + ++I EYM N SLD FL + K V ++ GIA
Sbjct: 67 IIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGK--FTVGQLVGMLRGIASGMKYLSE 124
Query: 636 ---------------DQHMNPKISDFGMARMFGGDELQGNTK--RIVGTYGYMSPEYALE 678
+ ++ K+SDFG++R E TK +I + +PE
Sbjct: 125 MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKI--PIRWTAPEAIAY 182
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV-LQN 737
F+ SDV+SFG++M E++S Y + W + D + D L
Sbjct: 183 RKFTSASDVWSFGIVMWEVMS-------YGERPY------WDMSNQDVIKAVEDGYRLPP 229
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ P + + L C Q++ +RPT S +VS ++
Sbjct: 230 PMDCPSALYQL--MLDCWQKDRNERPTFSQIVSTLDK 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 86.3 bits (214), Expect = 1e-18
Identities = 73/276 (26%), Positives = 112/276 (40%), Gaps = 58/276 (21%)
Query: 533 LGEGGFGPVYKG--RLLNGQE--VAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
LG G FG V KG + +G+E VAVK L G KEF E ++A+L H +VRL+
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 588 GCCIEQGEKILIYEYMVNK-SLDVFLFDP---TKKHLLGWQLRV---------------- 627
G C +GE +++ + L +L L +V
Sbjct: 63 GVC--KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRD 120
Query: 628 ---RIIDGIAQDQHMNPKISDFGMARM--FGGDELQGNT--KRIVGTYGYMSPEYALEGV 680
R + + + Q KISDFGM+R G D + T + + Y +PE G
Sbjct: 121 LAARNVLLVNRHQ---AKISDFGMSRALGAGSDYYRATTAGRWPLKWY---APECINYGK 174
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
FS KSDV+S+GV + E S +K + + +L L + + + + ++
Sbjct: 175 FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIML-- 232
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C + EDRPT S++ S
Sbjct: 233 --------------SCWKYRPEDRPTFSELESTFRR 254
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 3e-18
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
+ +G+G FG V G GQ+VAVK L + S + F E ++ L+H NLV+LLG
Sbjct: 12 ATIGKGEFGDVMLG-DYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVV 69
Query: 591 IEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRV------------------ 627
++ ++ EYM SL +L T LG+ L V
Sbjct: 70 LQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLA 129
Query: 628 -RII----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGV 680
R + D +A K+SDFG+A+ + QG G + +PE E
Sbjct: 130 ARNVLVSEDLVA-------KVSDFGLAK----EASQGQD---SGKLPVKWTAPEALREKK 175
Query: 681 FSVKSDVFSFGVLMLEILS 699
FS KSDV+SFG+L+ EI S
Sbjct: 176 FSTKSDVWSFGILLWEIYS 194
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 5e-18
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 45/275 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ + KLG G FG V+ G N +VAVK L + ++ F E L+ LQH LV
Sbjct: 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLV 64
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMN- 640
RL ++ +I EYM SL FL +L +L +I +G+A + N
Sbjct: 65 RLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 124
Query: 641 -----------------PKISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE G F
Sbjct: 125 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGSF 181
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
++KSDV+SFG+L+ EI++ K G+ N+D + L + + P ++N
Sbjct: 182 TIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM-----------PRMEN-- 228
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
P ++ C +E AE+RPT + S++++
Sbjct: 229 -CP--DELYDIMKTCWKEKAEERPTFDYLQSVLDD 260
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 86.7 bits (213), Expect = 5e-18
Identities = 62/313 (19%), Positives = 115/313 (36%), Gaps = 39/313 (12%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQH-R 581
++ I KLGEG FG VY R + + VA+K L+ + + ++ F E+ ++A L H
Sbjct: 1 SYRILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA---QDQH 638
N+V+L ++G L+ EY+ SL+ L +K L + I+ I + H
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 639 --------------------MNPKISDFGMARMFGGD----ELQGNTKRIVGTYGYMSPE 674
K+ DFG+A++ + VGT GYM+PE
Sbjct: 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE 178
Query: 675 YALEGVF---SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
L S SD++S G+ + E+L+ + + + +
Sbjct: 179 VLLGLSLAYASSSSDIWSLGITLYELLTGL--PPFEGEKNSSATSQTLKIILELP-TPSL 235
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTFT 791
L + ++ + ++ ++R + S +S L
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPD 295
Query: 792 KGKNMKYSSNSTS 804
++ S +
Sbjct: 296 DSAPLRLSLPPSL 308
|
Length = 384 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 1e-17
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 26/200 (13%)
Query: 526 NFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKR--LSNQSGQGLKEFKNEMMLIAKLQHRN 582
+F I +K+G+G FG V+K R + + A+K+ LS + + +E +E ++AKL
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL---LGWQLRVRIIDGIAQ---- 635
++R +++G+ ++ EY N L L + L W+ ++I+ G+A
Sbjct: 61 IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
D + N KI D G+A++ + NT IVGT Y+SPE + +
Sbjct: 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT--IVGTPYYLSPELCEDKPY 178
Query: 682 SVKSDVFSFGVLMLEILSSK 701
+ KSDV++ GV++ E + K
Sbjct: 179 NEKSDVWALGVVLYECCTGK 198
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 2e-17
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 45/209 (21%)
Query: 533 LGEGGFGPVYKGRLLN-------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLV 584
LG G FG VY+G + VAVK L + Q KEF E L++ H N+V
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----------TKKHLLGWQLRVRIIDGIA 634
+LLG C+ + +I E M L +L D T K LL + + + G
Sbjct: 63 KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELL--DICLDVAKGCV 120
Query: 635 QDQHMN-----------------------PKISDFGMAR-MFGGDELQGNTKRIVGTYGY 670
+ M+ KI DFG+AR ++ D + + ++ +
Sbjct: 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVR-W 179
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILS 699
M+PE L+G F+ +SDV+SFGVLM EIL+
Sbjct: 180 MAPESLLDGKFTTQSDVWSFGVLMWEILT 208
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 4e-17
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 30/194 (15%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
F I K+G+GGFG VYK R G+EVA+K + +S + ++ NE+ ++ K +H N+V+
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61
Query: 586 LLGCCIEQGEKILIYEYMVNKSL-DVFLFDPTKKHLLGWQLRVRIIDGIAQ------DQH 638
G +++ E ++ E+ SL D+ + L + + +
Sbjct: 62 YYGSYLKKDELWIVMEFCSGGSLKDLLK---STNQTLTESQIAYVCKELLKGLEYLHSNG 118
Query: 639 ------------MNPK----ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
+ + DFG++ +VGT +M+PE +
Sbjct: 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQL---SDTKARNTMVGTPYWMAPEVINGKPYD 175
Query: 683 VKSDVFSFGVLMLE 696
K+D++S G+ +E
Sbjct: 176 YKADIWSLGITAIE 189
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 5e-17
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 50/216 (23%)
Query: 533 LGEGGFGPVYKGR---LLNGQE---VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVR 585
+G+G FG V++ R LL + VAVK L + S +F+ E L+A+ H N+V+
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKH-LLGWQLRVRIIDG---------- 632
LLG C L++EYM L+ FL P + L R
Sbjct: 73 LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132
Query: 633 --IAQD--------------------------QHMNPKISDFGMAR-MFGGDELQGNTKR 663
IA+ ++M KI+DFG++R ++ D + +
Sbjct: 133 LCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASEND 192
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+ +M PE ++ +SDV+++GV++ EI S
Sbjct: 193 AIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEIFS 227
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 8e-17
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 44/272 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
++ + +LG G FG V G+ +VA+K + S EF E ++ KL H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLV 62
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID---GIAQ------ 635
+L G C +Q ++ EYM N L +L + K QL D G+A
Sbjct: 63 QLYGVCTKQRPIYIVTEYMSNGCLLNYLRE-HGKRFQPSQLLEMCKDVCEGMAYLESKQF 121
Query: 636 ------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALEGV 680
D K+SDFG++R DE + VG+ + PE L
Sbjct: 122 IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLLYSK 177
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740
FS KSDV++FGVLM E+ S K + ++ ++ K + L P L +E
Sbjct: 178 FSSKSDVWAFGVLMWEVYSLGKM-------PYERFNNSETVEKVSQGLRLYRPHLASE-- 228
Query: 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ + C E AE+RPT ++S I
Sbjct: 229 -----KVYAIMYSCWHEKAEERPTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 1e-16
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVRLLGCC 590
K+G+G FG VYKG L EVAVK + LK F E ++ + H N+V+L+G C
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 591 IEQGEKILIYEYMVNKSLDVFLFDP----TKKHLLGWQL-----------RVRIIDGIAQ 635
+++ ++ E + SL FL T K LL L + I +A
Sbjct: 62 VQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAA 121
Query: 636 -----DQHMNPKISDFGMARMFGGD--ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVF 688
++ KISDFGM+R G + K+I + +PE G ++ +SDV+
Sbjct: 122 RNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI--PIKWTAPEALNYGRYTSESDVW 179
Query: 689 SFGVLMLEILS 699
S+G+L+ E S
Sbjct: 180 SYGILLWETFS 190
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 2e-16
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 68/293 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLS-NQSGQGLKEFKNEMMLIAK 577
E ++ +LG+G FG VY+G VA+K ++ N S + EF NE ++ +
Sbjct: 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKE 65
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------------FD-PTKKHLLGWQ 624
++VRLLG +++ E M L +L PT + +
Sbjct: 66 FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMA 125
Query: 625 LRVRIIDGIA--QDQH----------------MNPKISDFGMAR-MFGGDELQGNTKRIV 665
I DG+A + + KI DFGM R ++ D + K ++
Sbjct: 126 AE--IADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLL 183
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL-- 721
+M+PE +GVF+ KSDV+SFGV++ E+ L+ + G+ N + + L
Sbjct: 184 PVR-WMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDL 242
Query: 722 --CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
D+ ELM +C Q N + RPT ++VS +
Sbjct: 243 PENCPDKLLELM--------------------RMCWQYNPKMRPTFLEIVSSL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 80.1 bits (197), Expect = 2e-16
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 50/267 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 64
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMN- 640
+L E+ I + EYM SL FL K+L QL +I G+A + MN
Sbjct: 65 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123
Query: 641 -----------------PKISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 179
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 180 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 238
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPT 764
C ++ E+RPT
Sbjct: 239 ----------------CWRKEPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 79.7 bits (196), Expect = 2e-16
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 58/281 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNL 583
E+ + KLG+G FG V+ G +VA+K L + G + E F E ++ KL+H L
Sbjct: 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTL--KPGTMMPEAFLQEAQIMKKLRHDKL 63
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMN 640
V L E+ I + E+M SL FL + K+L QL +I DG+A + MN
Sbjct: 64 VPLYAVVSEEPIYI-VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN 122
Query: 641 ------------------PKISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEG 679
KI+DFG+AR+ +E QG I + +PE AL G
Sbjct: 123 YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPI----KWTAPEAALYG 178
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKN---DRAHELMDP 733
F++KSDV+SFG+L+ E+++ + G+ N + + + + C + HELM
Sbjct: 179 RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMK- 237
Query: 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
LC +++ ++RPT + S + +
Sbjct: 238 -------------------LCWKKDPDERPTFEYIQSFLED 259
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 3e-16
Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 67/285 (23%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKR--LSNQSGQGLKEFKNEMMLIAKLQHRN 582
+ I ++G+G FG VY R +G+ +K LSN S + ++ NE+ ++ KL H N
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH-------LLGW--QL-------- 625
+++ E+G+ ++ EY L + K+ +L W QL
Sbjct: 61 IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120
Query: 626 RVRII-------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
+I+ +G+ K+ DFG++++ T +VGT Y+S
Sbjct: 121 SRKILHRDIKPQNIFLTSNGLV-------KLGDFGISKVLSSTVDLAKT--VVGTPYYLS 171
Query: 673 PEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
PE + ++ KSD++S G ++ E+ + K F +L EL
Sbjct: 172 PE-LCQNKPYNYKSDIWSLGCVLYELCTLKH--------PFE----GENL------LELA 212
Query: 732 DPVLQNEVSLPMLVRY----INVALLCVQENAEDRPTMSDVVSMI 772
+L+ + P+ +Y N+ +Q++ E+RP+++ ++
Sbjct: 213 LKILKGQYP-PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSP 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 3e-16
Identities = 60/273 (21%), Positives = 106/273 (38%), Gaps = 57/273 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRN 582
+ LG+G G VYK R G+ A+K++ + + K+ E+ + +
Sbjct: 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY 60
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV------RIIDGIA-- 634
+V+ G ++GE ++ EYM SL L K + V +I+ G+
Sbjct: 61 VVKCYGAFYKEGEISIVLEYMDGGSLADLL-----KKVGKIPEPVLAYIARQILKGLDYL 115
Query: 635 -QDQHM----------------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+H+ KI+DFG++++ + VGT YMSPE
Sbjct: 116 HTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVL--ENTLDQCNTFVGTVTYMSPERIQ 173
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVY------NTDSFNLLGHAWSLCKNDRAHELM 731
+S +D++S G+ +LE G + F L+ +C
Sbjct: 174 GESYSYAADIWSLGLTLLECA-----LGKFPFLPPGQPSFFELMQA---ICDGP------ 219
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
P L E P +I+ C+Q++ + RP+
Sbjct: 220 PPSLPAEEFSPEFRDFIS---ACLQKDPKKRPS 249
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 77.7 bits (191), Expect = 9e-16
Identities = 80/282 (28%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
E+ + KLG G FG V+ G +VAVK L + + F E ++ KL+H
Sbjct: 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDK 62
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHM 639
LV+L E+ I + EYM SL FL D + L L ++ G+A + M
Sbjct: 63 LVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 121
Query: 640 N------------------PKISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALE 678
N KI+DFG+AR+ +E QG I T +PE AL
Sbjct: 122 NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWT----APEAALY 177
Query: 679 GVFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKND---RAHELMD 732
G F++KSDV+SFG+L+ E+++ + G+ N + + + + C D HELM
Sbjct: 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELM- 236
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L C +++ E+RPT + S + +
Sbjct: 237 -------------------LQCWKKDPEERPTFEYLQSFLED 259
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 1e-15
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 48/213 (22%)
Query: 532 KLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLV 584
+LGE FG VYKG L Q VA+K L +++ L+E FK+E M+ ++LQH N+V
Sbjct: 12 ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIV 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLF-------------DPTKKHLLGWQLRVRIID 631
LLG ++ +I+ Y + L FL D T K L V I+
Sbjct: 72 CLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVT 131
Query: 632 GIA------QDQH----------------MNPKISDFGMAR-MFGGD--ELQGNTKRIVG 666
IA H +N KISD G+ R ++ D +L GN+ +
Sbjct: 132 QIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPI- 190
Query: 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+MSPE + G FS+ SD++S+GV++ E+ S
Sbjct: 191 --RWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 77.7 bits (191), Expect = 1e-15
Identities = 74/269 (27%), Positives = 116/269 (43%), Gaps = 48/269 (17%)
Query: 532 KLGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LGEG FG V+ LL Q+ VAVK L S ++F+ E L+ LQH+++VR
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFL--FDPTKKHL------------LGWQLRV--RI 629
G C E ++++EYM + L+ FL P K L LG L + +I
Sbjct: 72 FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131
Query: 630 IDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
G+ Q + KI DFGM+R + R + +M
Sbjct: 132 ASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 191
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT--GVYNTDSFNLLGHAWSL-----CKN 724
PE L F+ +SD++SFGV++ EI + K + NT++ + L C
Sbjct: 192 PPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPP 251
Query: 725 DRAHELMDPVLQNEVSLPMLVRYINVALL 753
+ + +M Q E M+++ I+ L
Sbjct: 252 E-VYAIMQGCWQREPQQRMVIKDIHSRLQ 279
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 69/288 (23%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL-------SNQSGQGLKEFKNEMMLI 575
NF I+ K+G+G F VYK LL+G+ VA+K++ + LKE L+
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEID----LL 56
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEY--------MVN--KSLDVFLFDPTKKHLLGWQL 625
+L H N+++ L IE E ++ E M+ K + + T W+
Sbjct: 57 KQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTI-----WKY 111
Query: 626 RVRIIDGIAQDQHMNP---------------------KISDFGMARMFGGDELQGNTKRI 664
V++ + HM+ K+ D G+ R F ++
Sbjct: 112 FVQLCSALE---HMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL-- 166
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSLC 722
VGT YMSPE E ++ KSD++S G L+ E+ L S + D NL +SLC
Sbjct: 167 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP-----FYGDKMNL----YSLC 217
Query: 723 KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770
K + P L + L ++ C+ + E RP +S V+
Sbjct: 218 KKIEKCDY--PPLPADHYSEELRDLVSR---CINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 2e-15
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 56/278 (20%)
Query: 528 SIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
+++ KLG G +G VY+G VAVK L + ++EF E ++ +++H NLV+L
Sbjct: 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQL 67
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLG---WQLRVRIIDG---------IA 634
LG C + +I E+M +L +L + ++ + + +I I
Sbjct: 68 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 127
Query: 635 QD---------QHMNPKISDFGMARMFGGDEL--QGNTKRIVGTYGYMSPEYALEGVFSV 683
+D ++ K++DFG++R+ GD K + + +PE FS+
Sbjct: 128 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSI 184
Query: 684 KSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHELMDPVLQ 736
KSDV++FGVL+ EI + + G+ + + LL + + C +ELM
Sbjct: 185 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPK-VYELM----- 238
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C Q N DRP+ +++
Sbjct: 239 ---------------RACWQWNPSDRPSFAEIHQAFET 261
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 3e-15
Identities = 74/288 (25%), Positives = 115/288 (39%), Gaps = 73/288 (25%)
Query: 533 LGEGGFGPVYKGRLL------NGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRNLV 584
LGEG FG V K + VAVK L + + + L + +EM ++ + +H+N++
Sbjct: 20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 79
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDP--------TKKHLLGWQL 625
LLG C ++G ++ EY + +L FL D T+K L+ +
Sbjct: 80 NLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAY 139
Query: 626 RV-RIIDGIAQ-----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A D M KI+DFG+AR + T
Sbjct: 140 QVARGMEFLASKKCIHRDLAARNVLVTEDHVM--KIADFGLARDIHHIDYYRKTTNGRLP 197
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGH------AWSL 721
+M+PE + V++ +SDV+SFGVL+ EI F L G L
Sbjct: 198 VKWMAPEALFDRVYTHQSDVWSFGVLLWEI--------------FTLGGSPYPGIPVEEL 243
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
K + M+ L L+R C E RPT +V
Sbjct: 244 FKLLKEGYRMEKPQNCTQELYHLMRD------CWHEVPSQRPTFKQLV 285
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 4e-15
Identities = 79/306 (25%), Positives = 119/306 (38%), Gaps = 96/306 (31%)
Query: 532 KLGEGGFGPVYKGRLLNGQE-----------------VAVKRL-SNQSGQGLKEFKNEMM 573
KLGEG FG V+ Q+ VAVK L + S ++F E+
Sbjct: 12 KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----FDPTKKH--------- 619
++++L N+ RLLG C +I EYM N L+ FL
Sbjct: 72 ILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFST 131
Query: 620 LLGWQLRVRIIDGIAQDQHMN------------------PKISDFGMAR-MFGGD--ELQ 658
LL + +I G+ + +N KI+DFGM+R ++ D +Q
Sbjct: 132 LL--YMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQ 189
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA 718
G R +M+ E L G F+ KSDV++FGV + EIL
Sbjct: 190 G---RAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEIL-------------------- 226
Query: 719 WSLCKNDRAHELMDP-VLQN----------EVSLPMLVR-----YINVALLCVQENAEDR 762
+LC+ L D V++N ++ LP Y + L C + + EDR
Sbjct: 227 -TLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIY-ELMLECWRRDEEDR 284
Query: 763 PTMSDV 768
PT ++
Sbjct: 285 PTFREI 290
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 75.8 bits (186), Expect = 4e-15
Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 46/204 (22%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRNL 583
+ ++ +GEG FG V +G GQ+VAVK + + + Q F E ++ KL H+NL
Sbjct: 6 QKLTLGEIIGEGEFGAVLQGEYT-GQKVAVKNIKCDVTAQA---FLEETAVMTKLHHKNL 61
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK------------------------KH 619
VRLLG + G I++ E M +L FL + K
Sbjct: 62 VRLLGVILHNGLYIVM-ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK 120
Query: 620 LLGWQLRVRII----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
L+ L R I DG+A K+SDFG+AR+ G N+K V + +PE
Sbjct: 121 LVHRDLAARNILVSEDGVA-------KVSDFGLARV--GSMGVDNSKLPV---KWTAPEA 168
Query: 676 ALEGVFSVKSDVFSFGVLMLEILS 699
FS KSDV+S+GVL+ E+ S
Sbjct: 169 LKHKKFSSKSDVWSYGVLLWEVFS 192
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 6e-15
Identities = 70/284 (24%), Positives = 111/284 (39%), Gaps = 63/284 (22%)
Query: 533 LGEGGFGPVYKGRLLNGQE------VAVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVR 585
LG G FG V+ + +E V VK L + EF+ E+ + KL H+N+VR
Sbjct: 13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQLRVRIIDGIAQD-QH 638
LLG C E +I EY L FL + K L + +V + IA H
Sbjct: 73 LLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDH 132
Query: 639 MNP---------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
++ K+S +++ E ++ +++PE
Sbjct: 133 LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALI-PLRWLAPEAVQ 191
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHA---WSLCKN--DRAHEL 730
E FS KSDV+SFGVLM E+ + + G+ + + N L + + R ++L
Sbjct: 192 EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKL 251
Query: 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
M C N +DRP+ S++VS +
Sbjct: 252 M--------------------TRCWAVNPKDRPSFSELVSALGE 275
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 6e-15
Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 59/291 (20%)
Query: 527 FSIQSKLGEGGFGPVYKGRL----LNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQH 580
+ LGEG FG V +G+L + +VAVK +L + ++EF +E + H
Sbjct: 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH 60
Query: 581 RNLVRLLGCCIEQGEK------ILIYEYMVNKSLDVFLFDP---TKKHLLGWQLRVRIID 631
N+++L+G C E ++I +M + L FL L Q ++ +
Sbjct: 61 PNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMV 120
Query: 632 GIAQ----------------------DQHMNPKISDFGMAR-MFGGDEL-QGNTKRIVGT 667
IA + M ++DFG+++ ++ GD QG ++
Sbjct: 121 DIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKM--P 178
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCKND 725
+++ E + V++ KSDV++FGV M EI + + GV N + ++ L H L + +
Sbjct: 179 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPE 238
Query: 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
+ +D + S C + + +DRPT + + ++ N L
Sbjct: 239 ---DCLDELYDLMYS-------------CWRADPKDRPTFTKLREVLENIL 273
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 9e-15
Identities = 74/280 (26%), Positives = 108/280 (38%), Gaps = 74/280 (26%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
+LG G FG V+ G+ +VA+K + N+ ++F E ++ KL H LV+L G C
Sbjct: 11 ELGSGQFGVVHLGKWRAQIKVAIKAI-NEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69
Query: 592 EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQD--QHMN--------- 640
+Q ++ E+M N L +L + G +L ++ + QD + M
Sbjct: 70 QQKPLYIVTEFMENGCLLNYL-----RQRQG-KLSKDMLLSMCQDVCEGMEYLERNSFIH 123
Query: 641 ---------------PKISDFGMARMFGGDELQGNTKRIVGTYG------YMSPEYALEG 679
K+SDFGM R DE + G + PE
Sbjct: 124 RDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-------TSSSGAKFPVKWSPPEVFNFS 176
Query: 680 VFSVKSDVFSFGVLMLEILS-------SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732
+S KSDV+SFGVLM E+ + K N V S R L
Sbjct: 177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMIS--------------RGFRLYR 222
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
P L M V V C E E RPT ++++ I
Sbjct: 223 PKLA-----SMTV--YEVMYSCWHEKPEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 3e-14
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQH 580
E + K+GEG G VYK G+EVA+K RL Q+ + + NE++++ +H
Sbjct: 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELII---NEILIMKDCKH 74
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSL----DVFLFDPTKKH--------LLGWQL--R 626
N+V + E ++ EYM SL + L G +
Sbjct: 75 PNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS 134
Query: 627 VRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+I D I + + K++DFG A + + +VGT +M+PE
Sbjct: 135 QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT--KEKSKRNSVVGTPYWMAPEVIKRKD 192
Query: 681 FSVKSDVFSFGVLMLEIL 698
+ K D++S G++ +E+
Sbjct: 193 YGPKVDIWSLGIMCIEMA 210
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 4e-14
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 64/307 (20%)
Query: 523 ATENFSIQSKLGEGGFGPVYKG---RLLNGQ---EVAVKRLSNQSGQGLK--EFKNEMML 574
+ E ++ +LG+G FG VY+G ++ G+ VAVK + N+S + EF NE +
Sbjct: 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASV 62
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + +++ E M + L +L PT + ++
Sbjct: 63 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 122
Query: 622 GWQLRVRIIDGIA---------QD---------QHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A +D KI DFGM R ++ D + K
Sbjct: 123 --QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 180
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ M+PE +GVF+ SD++SFGV++ EI L+ + G+ N +
Sbjct: 181 GLLPVRW-MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 239
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780
L + D E + +++ +C Q N + RPT ++V+++ ++L P
Sbjct: 240 LDQPDNCPERVTDLMR----------------MCWQFNPKMRPTFLEIVNLLKDDLH--P 281
Query: 781 SPKEPPF 787
S E F
Sbjct: 282 SFPEVSF 288
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 4e-14
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 44/211 (20%)
Query: 532 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSN-QSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LGE FG +YKG L + Q VA+K L + + Q EF+ E L+A+L H N+V
Sbjct: 12 ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFLF--------------DPTKKHLLG----WQLRV 627
LLG ++ +++EY+ L FL D T K L + +
Sbjct: 72 LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131
Query: 628 RIIDG---------IAQD---------QHMNPKISDFGMAR-MFGGDELQGNTKRIVGTY 668
+I G + +D + ++ KISD G++R ++ D + K ++
Sbjct: 132 QIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIR 191
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M PE + G FS SD++SFGV++ EI S
Sbjct: 192 -WMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 72.8 bits (178), Expect = 7e-14
Identities = 77/295 (26%), Positives = 122/295 (41%), Gaps = 68/295 (23%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN---GQE---VAVKRLSNQSGQGLKEFKNEMMLIAKLQ 579
N ++ +LGEG FG V+ N Q+ VAVK L + S K+F E L+ LQ
Sbjct: 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL----------------FDPTKKHLLGW 623
H ++V+ G C+E I+++EYM + L+ FL + T+ +L
Sbjct: 66 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQML-- 123
Query: 624 QLRVRIIDGIA--QDQH----------------MNPKISDFGMARMFGGDELQGNTKRIV 665
+ +I G+ QH + KI DFGM+R D + R+
Sbjct: 124 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRVG 179
Query: 666 G----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL 721
G +M PE + F+ +SDV+S GV++ EI + K W
Sbjct: 180 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK--------------QPWYQ 225
Query: 722 CKNDRAHELMDP--VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
N+ E + VLQ + P V ++ L C Q R + ++ S++ N
Sbjct: 226 LSNNEVIECITQGRVLQRPRTCPKEV--YDLMLGCWQREPHMRLNIKEIHSLLQN 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 8e-14
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 33/204 (16%)
Query: 531 SKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK 69
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFL------FDPTKKHLLGWQL------------ 625
G C G + L+ EY+ SL +L D K L Q+
Sbjct: 70 YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY 129
Query: 626 --RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG---TYGYMSPEYALEGV 680
R I + KI DFG+ ++ D+ + R G + Y +PE E
Sbjct: 130 VHRDLATRNILVESENRVKIGDFGLTKVLPQDK-EYYKVREPGESPIFWY-APESLTESK 187
Query: 681 FSVKSDVFSFGVLMLEILS-SKKN 703
FSV SDV+SFGV++ E+ + S K+
Sbjct: 188 FSVASDVWSFGVVLYELFTYSDKS 211
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 1e-13
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 49/219 (22%)
Query: 529 IQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
++ +LGEG FG V+ N VAVK L + + K+F+ E L+ LQH +
Sbjct: 9 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------------DPTK-KHLLGWQLRVRI 629
+V+ G C + I+++EYM + L+ FL P + K LG + I
Sbjct: 69 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 128
Query: 630 IDGIAQ------DQH----------------MNPKISDFGMARMFGGDELQGNTKRIVG- 666
IA QH + KI DFGM+R D + R+ G
Sbjct: 129 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVGGH 184
Query: 667 ---TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKK 702
+M PE + F+ +SDV+SFGV++ EI + K
Sbjct: 185 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 223
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.8 bits (177), Expect = 1e-13
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 34/204 (16%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-----FKNEMMLIAKLQH 580
+ +++GEG +G VYK R G+ VA+K++ ++ KE E+ L+ KL+H
Sbjct: 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENE---KEGFPITAIREIKLLQKLRH 57
Query: 581 RNLVRLLGCCIE--QGEKILIYEYM------VNKSLDVFLFDPTKKHLLGWQL------- 625
N+VRL +G +++EYM + S +V + K + QL
Sbjct: 58 PNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-QLLEGLQYL 116
Query: 626 ---RV--RIIDG--IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL- 677
+ R I G I + K++DFG+AR + T R++ T Y PE L
Sbjct: 117 HSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI-TLWYRPPELLLG 175
Query: 678 EGVFSVKSDVFSFGVLMLEILSSK 701
+ + D++S G ++ E+ K
Sbjct: 176 ATRYGPEVDMWSVGCILAELFLGK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 2e-13
Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 48/276 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG G FG V+ +VAVK + S ++ F E ++ LQH LV
Sbjct: 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 64
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL-FDPTKKHLLG--WQLRVRIIDGIAQDQHMN- 640
+L + + +I E+M SL FL D K L +I +G+A + N
Sbjct: 65 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 123
Query: 641 -----------------PKISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE G F
Sbjct: 124 IHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGSF 180
Query: 682 SVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCKNDRA-HELMDPVLQNE 738
++KSDV+SFG+L++EI++ + G+ N + L + + + + EL +
Sbjct: 181 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN------ 234
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ + C + E+RPT + S++++
Sbjct: 235 -----------IMMRCWKNRPEERPTFEYIQSVLDD 259
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 71.1 bits (174), Expect = 3e-13
Identities = 78/308 (25%), Positives = 124/308 (40%), Gaps = 90/308 (29%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQE-----------------VAVKRLSNQSGQGLK-EF 568
+ + KLGEG FG V+ ++ VAVK L + + + +F
Sbjct: 7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDF 66
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD------------PT 616
E+ ++++L+ N++RLL CI +I EYM N L+ FL T
Sbjct: 67 LKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVT 126
Query: 617 KKHLLGWQLRVRIIDGIAQDQHMN------------------PKISDFGMAR-MFGGD-- 655
+ + +I G+ +N KI+DFGM+R ++ GD
Sbjct: 127 ISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY 186
Query: 656 ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLL 715
+QG R V +MS E L G F+ SDV++FGV + EIL
Sbjct: 187 RIQG---RAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEIL----------------- 226
Query: 716 GHAWSLCKNDRAHELMDP-VLQN----------EVSLPMLVR----YINVALLCVQENAE 760
+LCK +L D V++N +V LP + L C + NA+
Sbjct: 227 ----TLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAK 282
Query: 761 DRPTMSDV 768
+RP+ ++
Sbjct: 283 ERPSFQEI 290
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 70.7 bits (173), Expect = 3e-13
Identities = 67/201 (33%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 530 QSKLGEGGFGPV--YKGRLLN---GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNL 583
LGEG FG V Y N G+ VAVK L + GQ +K E+ ++ L H N+
Sbjct: 9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68
Query: 584 VRLLGCCIEQGEKI--LIYEYMVNKSLDVFLFDPTKKHLLGW-QLRV---RIIDGIAQ-- 635
V+ GCC EQG K LI EY+ SL +L KH L QL + +I +G+A
Sbjct: 69 VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL----PKHKLNLAQLLLFAQQICEGMAYLH 124
Query: 636 ----------------DQHMNPKISDFGMARMF-GGDELQGNTKRIVGTYGYMSPEYALE 678
D KI DFG+A+ G E + + + E E
Sbjct: 125 SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE 184
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
FS SDV+SFGV + E+L+
Sbjct: 185 NKFSYASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 5e-13
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 53/221 (23%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQE---------------VAVKRL-SNQSGQGLKEFKNEM 572
++ KLGEG FG V+ E VAVK L ++ + +F E+
Sbjct: 9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI 68
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKH 619
++++L++ N++RLLG C+ +I EYM N L+ FL P+
Sbjct: 69 KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSI 128
Query: 620 LLGWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGD--ELQ 658
+ V+I G+ H KI+DFGM+R ++ GD +Q
Sbjct: 129 ANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQ 188
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
G R V +M+ E L G F+ SDV++FGV + E+ +
Sbjct: 189 G---RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 5e-13
Identities = 77/303 (25%), Positives = 124/303 (40%), Gaps = 80/303 (26%)
Query: 526 NFSIQSKLGEGGFGPVYKGRL--LNGQ----EVAVKRL-SNQSGQGLKEFKNEMMLIAKL 578
N + LGEG FG V K L G+ VAVK L N S L++ +E L+ ++
Sbjct: 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL----------------------FDPT 616
H ++++L G C + G +LI EY SL FL +P
Sbjct: 61 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120
Query: 617 KKHL-------LGWQLRVRIIDGIAQDQHMN------------------PKISDFGMARM 651
++ L WQ I G+ M KISDFG++R
Sbjct: 121 ERALTMGDLISFAWQ----ISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRD 176
Query: 652 FGGDE--LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVY 707
++ ++ + RI +M+ E + +++ +SDV+SFGVL+ EI++ N G+
Sbjct: 177 VYEEDSYVKRSKGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234
Query: 708 NTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSD 767
FNLL + + + + E M N+ L C ++ + RPT +D
Sbjct: 235 PERLFNLLKTGYRMERPENCSEEM----------------YNLMLTCWKQEPDKRPTFAD 278
Query: 768 VVS 770
+
Sbjct: 279 ISK 281
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 5e-13
Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 47/276 (17%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSN---QSGQGLKEFKNEMMLIAKLQHR 581
NF I+ K+G G F VY+ LL+G VA+K++ + + E+ L+ +L H
Sbjct: 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL-----GWQLRVRIIDGIAQD 636
N+++ IE E ++ E L + K+ L W+ V++ +
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSAL--- 119
Query: 637 QHMNP---------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
+HM+ K+ D G+ R F ++ +VGT YMSPE
Sbjct: 120 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPER 177
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735
E ++ KSD++S G L+ E+ + + + D NL +SLCK + + P L
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNL----YSLCK--KIEQCDYPPL 228
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771
++ L + +N +C+ + E RP ++ V +
Sbjct: 229 PSDHYSEELRQLVN---MCINPDPEKRPDITYVYDV 261
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 5e-13
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 32/197 (16%)
Query: 533 LGEGGFGPVYKGRLLNGQ-EVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
LG+G +G VY R L+ Q +A+K + + + ++ E+ L + L+HRN+V+ LG
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75
Query: 592 EQGEKILIYEYMVNKSLDVFL---FDPTK-----------------KHLLGWQLRVRIID 631
E G + E + SL L + P K K+L Q+ R I
Sbjct: 76 ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 632 GIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV--FSVK 684
G + +N KISDFG ++ G + T+ GT YM+PE +G +
Sbjct: 136 G--DNVLVNTYSGVVKISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDKGPRGYGAP 191
Query: 685 SDVFSFGVLMLEILSSK 701
+D++S G ++E+ + K
Sbjct: 192 ADIWSLGCTIVEMATGK 208
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 6e-13
Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 42/268 (15%)
Query: 533 LGEGGFGPVYKGRLL--NGQEV--AVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLL 587
+G+G FG VY G L+ +GQ++ AVK L+ + + +++F E +++ H N++ LL
Sbjct: 3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62
Query: 588 GCCI-EQGEKILIYEYMVNKSLDVFLFD----PTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ PT K L+G+ L+V + ++ +A
Sbjct: 63 GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHR 122
Query: 636 ---------DQHMNPKISDFGMARMFGGDELQG--NTKRIVGTYGYMSPEYALEGVFSVK 684
D+ K++DFG+AR E N +M+ E F+ K
Sbjct: 123 DLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTK 182
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E++ ++ + DSF++ + L + R +LQ E L
Sbjct: 183 SDVWSFGVLLWELM-TRGAPPYPDVDSFDITVY---LLQGRR-------LLQPEYCPDPL 231
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMI 772
V L C E RPT S++VS I
Sbjct: 232 Y---EVMLSCWHPKPEMRPTFSELVSRI 256
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 6e-13
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 43/269 (15%)
Query: 532 KLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRL 586
KLG+G FG V +G VAVK L + + +F E ++ L H NL+RL
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLG---WQLRVRIIDGIA--QDQHM-- 639
G + ++ E SL L H L V+I +G+ + +
Sbjct: 62 YGVVLTHPLM-MVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIH 120
Query: 640 --------------NPKISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
KI DFG+ R D V + + +PE FS
Sbjct: 121 RDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV-PFAWCAPESLRTRTFSH 179
Query: 684 KSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743
SDV+ FGV + E+ + Y + + L + L K D+ E ++ + E
Sbjct: 180 ASDVWMFGVTLWEMFT-------YGEEPWAGLSGSQILKKIDKEGERLE---RPEACPQ- 228
Query: 744 LVRYINVALLCVQENAEDRPTMSDVVSMI 772
NV L C N DRPT + + +
Sbjct: 229 --DIYNVMLQCWAHNPADRPTFAALREFL 255
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 7e-13
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 30/197 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G+G FG V G G +VAVK + N + + F E ++ +L+H NLV
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 62
Query: 585 RLLGCCIEQ-GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMN 640
+LLG +E+ G ++ EYM SL +L + L G L + + + + + N
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN 122
Query: 641 ------------------PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
K+SDFG+ + Q K V + +PE E FS
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTGKLPV---KWTAPEALREKKFS 177
Query: 683 VKSDVFSFGVLMLEILS 699
KSDV+SFG+L+ EI S
Sbjct: 178 TKSDVWSFGILLWEIYS 194
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 1e-12
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 62/294 (21%)
Query: 523 ATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMMLI 575
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE ++
Sbjct: 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63
Query: 576 AKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + QG+ L I E M L +L P+ K ++
Sbjct: 64 KEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMI 122
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 123 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 180
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 181 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL 239
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L K D +++ +++ +C Q N + RP+ +++S I
Sbjct: 240 LDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKE 277
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 63/268 (23%)
Query: 533 LGEGGFGPVYKG-RLLNGQEVAVKRLS----NQSGQG-LKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VY+G L +G AVK +S Q+GQ +K+ + E+ L++KLQH N+V+
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 587 LGCCIEQGEKILIY-EYMVNKSLDVFL--FDP---------TKKHLLGWQ------LRVR 628
LG E + + I+ E + SL L + T++ LLG + R
Sbjct: 68 LGTERE-EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHR 126
Query: 629 IIDG--IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGVFSVKS 685
I G I D + K++DFGMA+ K G+ +M+PE +G + + +
Sbjct: 127 DIKGANILVDTNGVVKLADFGMAKQV---VEFSFAKSFKGSPYWMAPEVIAQQGGYGLAA 183
Query: 686 DVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK---------NDRAHELMDPVLQ 736
D++S G +LE+ + K WS + + + L
Sbjct: 184 DIWSLGCTVLEMATGKP---------------PWSQLEGVAAVFKIGRSKELPPIPDHLS 228
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPT 764
+E + L C+Q + RPT
Sbjct: 229 DEAK--------DFILKCLQRDPSLRPT 248
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN--EMMLIAKLQHRNL 583
+ K+GEG +G VYK R L G+ VA+K++ + E+ L+ +L H N+
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK-------KHLLGWQL--------RVR 628
++LL +G+ L++E+M + L + D + K L +QL
Sbjct: 61 IKLLDVFRHKGDLYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYL-YQLLQGLAFCHSHG 118
Query: 629 II------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGVF 681
I+ + + + K++DFG+AR FG V T Y +PE L + +
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSP--VRPYTHYVVTRWYRAPELLLGDKGY 176
Query: 682 SVKSDVFSFGVLMLEILS 699
S D++S G + E+LS
Sbjct: 177 STPVDIWSVGCIFAELLS 194
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 68.0 bits (166), Expect = 3e-12
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 62/229 (27%)
Query: 530 QSKLGEGGFGPVYKGRLLNGQE-----------------VAVKRL-SNQSGQGLKEFKNE 571
+ KLGEG FG V+ ++N Q+ VAVK L + + +F E
Sbjct: 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKE 69
Query: 572 MMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--------------FDPTK 617
+ ++++L+ N++RLLG C+++ +I EYM N L+ FL P
Sbjct: 70 VKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPA 129
Query: 618 KHLL--GWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMAR-MF 652
L + + + IA +++ KI+DFGM+R ++
Sbjct: 130 HCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLY 189
Query: 653 GGD--ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
GD +QG R V +M+ E L G F+ SDV++FGV + EIL
Sbjct: 190 AGDYYRIQG---RAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 68.2 bits (166), Expect = 3e-12
Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 39/265 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQHRN 582
FS ++G G FG VY R + N + VA+K++S QS + ++ E+ + KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGIA--QDQ 637
++ GC + + L+ EY + + D L + KK L ++ + G+A
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 638 HM--------NPKISDFGMARM--FGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSVK 684
+M N +S+ G+ ++ FG + VGT +M+PE L EG + K
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
DV+S G+ +E+ +++ ++N ++ + L H + +N+ P LQ+
Sbjct: 195 VDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQNE------SPALQSGHWSEYF 243
Query: 745 VRYINVALLCVQENAEDRPTMSDVV 769
+++ C+Q+ +DRPT S+V+
Sbjct: 244 RNFVDS---CLQKIPQDRPT-SEVL 264
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 4e-12
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 72/290 (24%)
Query: 526 NFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQH 580
I+ +G G FG V GRL L G+ VA+K L + + + ++F +E ++ + H
Sbjct: 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH 64
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH---LLGWQLRVRIIDGIAQ-- 635
N++ L G + +++ EYM N SLD FL +KH QL V ++ GIA
Sbjct: 65 PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFL----RKHDGQFTVIQL-VGMLRGIASGM 119
Query: 636 --------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG------ 669
+ ++ K+SDFG++R+ D T R G
Sbjct: 120 KYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR-----GGKIPIR 174
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---- 725
+ +PE F+ SDV+S+G++M E++S Y + W + D
Sbjct: 175 WTAPEAIAYRKFTSASDVWSYGIVMWEVMS-------YGERPY------WEMSNQDVIKA 221
Query: 726 --RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773
+ L P + +L L+ L C Q++ +RP +VS+++
Sbjct: 222 IEEGYRLPAP-MDCPAALHQLM------LDCWQKDRNERPKFEQIVSILD 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E F I KLGEG +G VYK GQ VA+K + + L+E E+ ++ + +
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE--DLQEIIKEISILKQCDSPYI 60
Query: 584 VRLLGCCIEQGEKILIYEY-----------MVNKSLD-----VFLFDPTKKHLLGWQLRV 627
V+ G + + ++ EY + NK+L L+ K L +
Sbjct: 61 VKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKG--LEYLHSN 118
Query: 628 RIID------GIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ I I ++ K++DFG++ + NT ++GT +M+PE E +
Sbjct: 119 KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT--VIGTPFWMAPEVIQEIGY 176
Query: 682 SVKSDVFSFGVLMLEILSSK 701
+ K+D++S G+ +E+ K
Sbjct: 177 NNKADIWSLGITAIEMAEGK 196
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 4e-12
Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 64/282 (22%)
Query: 530 QSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLV 584
Q +G G FG V++G L + G++ VA+K L + + ++F +E ++ + H N++
Sbjct: 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNII 69
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
RL G + ++I EYM N +LD +L D +QL V ++ GIA
Sbjct: 70 RLEGVVTKFKPAMIITEYMENGALDKYLRD-HDGEFSSYQL-VGMLRGIAAGMKYLSDMN 127
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG------YMSPEYA 676
+ ++ K+SDFG++R+ L+ + + T G + +PE
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRV-----LEDDPEGTYTTSGGKIPIRWTAPEAI 182
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV-- 734
F+ SDV+SFG++M E++S + + W + HE+M +
Sbjct: 183 AYRKFTSASDVWSFGIVMWEVMS-------FGERPY------WDMSN----HEVMKAIND 225
Query: 735 ---LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773
L + P V + L C Q++ RP D+V++++
Sbjct: 226 GFRLPAPMDCPSAVY--QLMLQCWQQDRARRPRFVDIVNLLD 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 4e-12
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 64/292 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLKE-FKNEMMLIAK 577
N S LG G FG V + L +VAVK L + +E +E+ +++
Sbjct: 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94
Query: 578 L-QHRNLVRLLGCCIEQGEKILIYEY-----MVN---KSLDVFLFDPTKKHLLGWQLRVR 628
L H N+V LLG C G ++I EY ++N + + FL T + LL + +V
Sbjct: 95 LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFL---TLEDLLSFSYQV- 150
Query: 629 IIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQGNTKRIVGT 667
G+A N KI DFG+AR D ++GN + V
Sbjct: 151 -AKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVK- 208
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGV-YNTDSFNLLGHAWSLCKN 724
+M+PE V++ +SDV+S+G+L+ EI S N G+ ++ + L+ + + +
Sbjct: 209 --WMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQP 266
Query: 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
+ A + +++ C + RPT +V +I +L
Sbjct: 267 EHAPAEIYDIMKT----------------CWDADPLKRPTFKQIVQLIGKQL 302
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 6e-12
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 47/273 (17%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQHR 581
NF I+ K+G G F VY+ LL+ + VA+K++ + ++ E+ L+ +L H
Sbjct: 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLD-VFLFDPTKKHLLG----WQLRVRIIDGIAQD 636
N+++ L IE E ++ E L + + +K L+ W+ V++ +
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAV--- 119
Query: 637 QHMNP---------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
+HM+ K+ D G+ R F ++ +VGT YMSPE
Sbjct: 120 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPER 177
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735
E ++ KSD++S G L+ E+ + + + D NL SLC+ + + P L
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNLF----SLCQ--KIEQCDYPPL 228
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
E L ++ +C+ + + RP + V
Sbjct: 229 PTEHYSEKLRELVS---MCIYPDPDQRPDIGYV 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 1e-11
Identities = 85/319 (26%), Positives = 127/319 (39%), Gaps = 78/319 (24%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLS-NQSGQGLKEFKNEMMLI 575
+ + LGEG FG V K R VAVK L N + + L + +EM L+
Sbjct: 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELM 71
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTKKH--LL 621
+ +H+N++ LLG C ++G +I EY +L FL FD TK L
Sbjct: 72 KLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQL 131
Query: 622 GWQLRV----RIIDG--------------------IAQDQHMNPKISDFGMARMFGGDEL 657
++ V ++ G + +D M KI+DFG+AR +
Sbjct: 132 SFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVM--KIADFGLARGVHDIDY 189
Query: 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL 715
T +M+PE + V++ +SDV+SFG+LM EI L G+ + F LL
Sbjct: 190 YKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLL 249
Query: 716 --GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM-- 771
GH ++ HEL ML+R C RPT +V
Sbjct: 250 REGHRMD-KPSNCTHELY-----------MLMRE------CWHAVPTQRPTFKQLVEALD 291
Query: 772 -----INNELFNLPSPKEP 785
++ E +L P E
Sbjct: 292 KVLAAVSEEYLDLSMPFEQ 310
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 1e-11
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 56/267 (20%)
Query: 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMM---LIAKLQHRNLVRL 586
+LG G G V K G+ +AVK + + K + ++ K +V
Sbjct: 7 GELGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINEAIQKQILRELDILHKCNSPYIVGF 64
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFL---FDPTKKHLLGWQLRVRIIDGIA--QDQH--- 638
G G+ + EYM SLD L + +LG ++ V ++ G+ ++H
Sbjct: 65 YGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILG-KIAVAVLKGLTYLHEKHKII 123
Query: 639 ----------MNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+N K+ DFG++ G + K VGT YM+PE +SVK
Sbjct: 124 HRDVKPSNILVNSRGQIKLCDFGVS----GQLVNSLAKTFVGTSSYMAPERIQGNDYSVK 179
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD-------PVLQN 737
SD++S G+ ++E+ + + N + EL+ P L +
Sbjct: 180 SDIWSLGLSLIELATGRFPYPPENDPPDGIF-------------ELLQYIVNEPPPRLPS 226
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPT 764
P ++N LC+ ++ +RP+
Sbjct: 227 GKFSPDFQDFVN---LCLIKDPRERPS 250
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 2e-11
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 48/267 (17%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKR-----LSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+G FG VY ++ G+E+AVK+ S ++ + + + E+ L+ LQH +V+
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69
Query: 587 LGCCIEQGEKILIY-EYMVNKSLDVFL--FDPTKKHLLGWQLRVRIIDGIA--------- 634
G C+ E + I+ EYM S+ L + + + R +I++G+
Sbjct: 70 YG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTR-QILEGVEYLHSNMIVH 127
Query: 635 ---------QDQHMNPKISDFGMARMFGGDELQGNTKRIV-GTYGYMSPEYALEGVFSVK 684
+D N K+ DFG ++ G + V GT +MSPE + K
Sbjct: 128 RDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRK 187
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDS--FNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742
+DV+S G ++E+L+ K + + F + A + +P L + VS P
Sbjct: 188 ADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI------------ATQPTNPQLPSHVS-P 234
Query: 743 MLVRYINVALLCVQENAEDRPTMSDVV 769
++ ENA+ RP+ +++
Sbjct: 235 DARNFLR---RTFVENAKKRPSAEELL 258
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 3e-11
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 38/200 (19%)
Query: 532 KLGEGGFGPVYKGR-LLNGQEVAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHRNLVRLLG 588
K+GEG +G VYK R L G+ VA+K++ +G+ E+ L+ +L H N+VRLL
Sbjct: 6 KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLD 65
Query: 589 CCIEQGEKILIYEYM---VNKSLD---VFLFDPT--KKHLLGWQLRVRIIDGIA------ 634
+ + L++E++ + K +D + DP K +L +QL + GIA
Sbjct: 66 VVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYL--YQL----LQGIAYCHSHR 119
Query: 635 --------Q----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG-VF 681
Q D+ K++DFG+AR F G ++ T +V T Y +PE L +
Sbjct: 120 VLHRDLKPQNLLIDREGALKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGSRQY 177
Query: 682 SVKSDVFSFGVLMLEILSSK 701
S D++S G + E+++ +
Sbjct: 178 STPVDIWSIGCIFAEMVNRR 197
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 4e-11
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 27/193 (13%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L+ +G + EF +E +++A + H +LVRL
Sbjct: 15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPT----KKHLLGWQLRV----------RII-- 630
LG C+ + L+ + M + L ++ + + LL W +++ R++
Sbjct: 75 LGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 133
Query: 631 DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSD 686
D A++ + KI+DFG+AR+ GDE + N +M+ E F+ +SD
Sbjct: 134 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 193
Query: 687 VFSFGVLMLEILS 699
V+S+GV + E+++
Sbjct: 194 VWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 5e-11
Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 73/299 (24%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNG---QEVAVKRLSNQSGQG-LKEFKNEMMLIAKL-QH 580
+ Q +GEG FG V K R+ + A+KR+ + + ++F E+ ++ KL H
Sbjct: 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 67
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------FDP------------TKKHLL 621
N++ LLG C +G L EY + +L FL DP + + LL
Sbjct: 68 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 127
Query: 622 GWQLRV-RIIDGIAQDQHMN---------------PKISDFGMARMFGGDELQGNTKRIV 665
+ V R +D ++Q Q ++ KI+DFG++R G E+ K+ +
Sbjct: 128 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVY--VKKTM 182
Query: 666 GTYG--YMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSL 721
G +M+ E V++ SDV+S+GVL+ EI+S G+ + + L + L
Sbjct: 183 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 242
Query: 722 CK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K +D ++LM C +E +RP+ + ++ +N L
Sbjct: 243 EKPLNCDDEVYDLMRQ--------------------CWREKPYERPSFAQILVSLNRML 281
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 5e-11
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 54/279 (19%)
Query: 529 IQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNL 583
I+ +G G FG V +GRL L G+ VA+K L S + + ++F +E ++ + H N+
Sbjct: 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI 67
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQLRVRIIDGIAQDQ 637
+ L G + ++I E+M N +LD FL F + L+G LR I G+
Sbjct: 68 IHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQ--LVG-MLR-GIAAGMKYLS 123
Query: 638 HMN------------------PKISDFGMARMFGGDELQGNTKRIVG---TYGYMSPEYA 676
MN K+SDFG++R D +G + +PE
Sbjct: 124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAI 183
Query: 677 LEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734
F+ SDV+S+G++M E++S + + N D N + + L P
Sbjct: 184 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRL----------PPP 233
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773
+ +L L+ L C Q++ RP +VS ++
Sbjct: 234 MDCPTALHQLM------LDCWQKDRNARPKFGQIVSTLD 266
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 56/274 (20%)
Query: 535 EGGFGPVYKGRLLNG-----QEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLG 588
EG FG ++ G L++ +EV VK + + + + + E L+ L H+N++ +L
Sbjct: 16 EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILH 75
Query: 589 CCIEQGEK-ILIYEYMVNKSLDVFLFDP-----TKKHLLGWQ----LRVRIIDGIAQ--- 635
CIE GE ++Y YM +L +FL L Q + ++I G++
Sbjct: 76 VCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK 135
Query: 636 ---------------DQHMNPKISDFGMAR-MFGGDE--LQGNTKRIVGTYGYMSPEYAL 677
D+ + KI+D ++R +F D L N R V +M+ E +
Sbjct: 136 RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPV---KWMALESLV 192
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV-LQ 736
+S SDV+SFGVL+ E+++ + V D F + A L D L
Sbjct: 193 NKEYSSASDVWSFGVLLWELMTLGQTPYV-EIDPFEM------------AAYLKDGYRLA 239
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770
++ P V C + E+RP+ S +V
Sbjct: 240 QPINCPD--ELFAVMACCWALDPEERPSFSQLVQ 271
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 27/195 (13%)
Query: 532 KLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
K+GEG +G VYKGR GQ VA+K RL ++ E+ L+ +LQH N+V L
Sbjct: 7 KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQD 66
Query: 589 CCIEQGEKILIYEYM------------VNKSLDV-----FLFDPTKKHLLGWQLRVRIID 631
+++ LI+E++ + +D +L+ + L RV D
Sbjct: 67 VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRD 126
Query: 632 GIAQ----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSD 686
Q D K++DFG+AR F G ++ T +V T Y +PE L +S D
Sbjct: 127 LKPQNLLIDNKGVIKLADFGLARAF-GIPVRVYTHEVV-TLWYRAPEVLLGSPRYSTPVD 184
Query: 687 VFSFGVLMLEILSSK 701
++S G + E+ + K
Sbjct: 185 IWSIGTIFAEMATKK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 5e-11
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRNLVRLLGCCI 591
LG+G FG V+KG L + VAVK Q LK +F +E ++ + H N+V+L+G C
Sbjct: 3 LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62
Query: 592 EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNP---------- 641
++ ++ E + FL K L QL +D A ++
Sbjct: 63 QRQPIYIVMELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAA 121
Query: 642 -----------KISDFGMARMF-GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
KISDFGM+R G K+I + +PE G +S +SDV+S
Sbjct: 122 RNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI--PIKWTAPEALNYGRYSSESDVWS 179
Query: 690 FGVLMLEILS 699
+G+L+ E S
Sbjct: 180 YGILLWETFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 5e-11
Identities = 63/272 (23%), Positives = 116/272 (42%), Gaps = 52/272 (19%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQG---LKEFKNEMMLIAKLQHRNLVR 585
LG G F Y+ R + G +AVK+++ N S + ++ + E+ L+A+L H +++R
Sbjct: 8 LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR 67
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFL--FDPTKKHLLGWQLRV-----------RII-- 630
+LG E L E+M S+ L + K+ ++ +II
Sbjct: 68 MLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHR 127
Query: 631 ----DGIAQD---QHMNPKISDFGMA-----RMFGGDELQGNTKRIVGTYGYMSPEYALE 678
+ D Q + +I+DFG A + G E QG +++GT +M+PE
Sbjct: 128 DVKGANLLIDSTGQRL--RIADFGAAARLAAKGTGAGEFQG---QLLGTIAFMAPEVLRG 182
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYN-TDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
+ DV+S G +++E+ ++K ++ L+ S E + P L+
Sbjct: 183 EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLR- 241
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
+V L C++ EDRP +++
Sbjct: 242 -----------DVTLRCLELQPEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 62.8 bits (152), Expect = 1e-10
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 533 LGEGGFGPVY------KGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+G FG VY GR L ++V S ++ + + + E+ L+ LQH +V+
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69
Query: 587 LGCCIEQGEKIL--IYEYMVN-------KSLDVFLFDPTKK----------HLLGWQLRV 627
GC ++ EK L EYM K+ T+K +L +
Sbjct: 70 YGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVH 129
Query: 628 RIIDG--IAQDQHMNPKISDFGMARMFGGDELQGNTKR-IVGTYGYMSPEYALEGVFSVK 684
R I G I +D N K+ DFG ++ + G R + GT +MSPE + K
Sbjct: 130 RDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRK 189
Query: 685 SDVFSFGVLMLEILSSK 701
+DV+S G ++E+L+ K
Sbjct: 190 ADVWSLGCTVVEMLTEK 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 1e-10
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 42/223 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQ---EVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
LGEG FG V +G+L +VAVK +++ + +++F +E + + + H N++RL+
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 588 GCCIEQGEK------ILIYEYMVNKSLDVFLFDP---TKKHLLGWQLRVRIIDGIAQ--- 635
G C++ E ++I +M + L FL L Q+ V+ + IA
Sbjct: 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126
Query: 636 -------------------DQHMNPKISDFGMAR-MFGGDEL-QGNTKRIVGTYGYMSPE 674
+++MN ++DFG+++ ++ GD QG ++ +++ E
Sbjct: 127 YLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKM--PVKWIAIE 184
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLL 715
+ V++ KSDV+SFGV M EI + + GV N++ ++ L
Sbjct: 185 SLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYL 227
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 41/209 (19%)
Query: 527 FSIQSKLGEGGFGPVYK------GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH 580
+ + +G+G FG V K G++L +E+ ++ + Q L +E+ ++ +L+H
Sbjct: 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLV---SEVNILRELKH 58
Query: 581 RNLVRLLGCCI-EQGEKILIY-EY--------MVNKS------------LDVF--LFDPT 616
N+VR I + + I EY ++ K + L
Sbjct: 59 PNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLAL 118
Query: 617 KKHLLGWQLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
+ ++ I D + N K+ DFG+A++ G D K VGT Y
Sbjct: 119 YECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD--SSFAKTYVGTPYY 176
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILS 699
MSPE + KSD++S G L+ E+ +
Sbjct: 177 MSPEQLNHMSYDEKSDIWSLGCLIYELCA 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 1e-10
Identities = 52/227 (22%), Positives = 86/227 (37%), Gaps = 58/227 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
++F +GEG F V + +E A+K L + Q +KE K E ++ +L
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKR--QLIKEKKVKYVKIEKEVLTRL 58
Query: 579 -QHRNLVRLLGCCIEQGEKILIYEYMVN----------KSLDV---------------FL 612
H +++L ++ + EY N SLD +L
Sbjct: 59 NGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYL 118
Query: 613 FDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL-------------QG 659
H G R + I D+ M+ KI+DFG A++ + Q
Sbjct: 119 ------HSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQI 172
Query: 660 NTKRI-----VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
R VGT Y+SPE E SD+++ G ++ ++L+ K
Sbjct: 173 EKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 63.2 bits (153), Expect = 1e-10
Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 40/269 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLS---NQSGQGLKEFKNEMMLIAKLQHRN 582
F+ ++G G FG VY R + EV A+K++S QS + ++ E+ + +++H N
Sbjct: 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQD------ 636
+ GC + + L+ EY + + D L + KK L ++ I G Q
Sbjct: 87 SIEYKGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEI-AAITHGALQGLAYLHS 143
Query: 637 --------QHMNPKISDFGMARM--FGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
+ N +++ G ++ FG + VGT +M+PE L EG +
Sbjct: 144 HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDG 203
Query: 684 KSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743
K DV+S G+ +E+ +++ ++N ++ + L H + +N+ P LQ+
Sbjct: 204 KVDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQNE------SPTLQSNEWSDY 252
Query: 744 LVRYINVALLCVQENAEDRPTMSDVVSMI 772
+++ C+Q+ +DRPT +++ +
Sbjct: 253 FRNFVDS---CLQKIPQDRPTSEELLKHM 278
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 2e-10
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 41/265 (15%)
Query: 530 QSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
++ + G G YKG+ + NG + VK +++ + E + + KLQH N+V+L+G
Sbjct: 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIAD----MGKLQHPNIVKLIG 750
Query: 589 CCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQ-----HMNPKI 643
C + LI+EY+ K+L L + L W+ R +I GIA+ +P +
Sbjct: 751 LCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAV 804
Query: 644 SDFGMAR----MFGGDE----------LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + G DE L +TK + + Y++PE + KSD++
Sbjct: 805 VVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISS-AYVAPETRETKDITEKSDIYG 863
Query: 690 FGVLMLEILSSKKNT----GVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM-- 743
FG++++E+L+ K GV + + +S C D +DP ++ +VS+
Sbjct: 864 FGLILIELLTGKSPADAEFGV-HGSIVEWARYCYSDCHLDM---WIDPSIRGDVSVNQNE 919
Query: 744 LVRYINVALLCVQENAEDRPTMSDV 768
+V +N+AL C + RP +DV
Sbjct: 920 IVEVMNLALHCTATDPTARPCANDV 944
|
Length = 968 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 42/262 (16%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQHRN 582
F+ ++G G FG VY R + + VA+K++S QS + ++ E+ + +L+H N
Sbjct: 17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHM--- 639
+ GC + + L+ EY + + D+ + KK L ++ I G Q
Sbjct: 77 TIEYKGCYLREHTAWLVMEYCLGSASDI--LEVHKKPLQEVEI-AAICHGALQGLAYLHS 133
Query: 640 -----------NPKISDFGMARM--FGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
N +++ G ++ FG L VGT +M+PE L EG +
Sbjct: 134 HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDG 193
Query: 684 KSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ-NEVSLP 742
K DV+S G+ +E+ +++ ++N ++ + L H + +ND P L N+ S
Sbjct: 194 KVDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQND------SPTLSSNDWSD- 241
Query: 743 MLVRYINVALLCVQENAEDRPT 764
+ N C+Q+ +DRP+
Sbjct: 242 ---YFRNFVDSCLQKIPQDRPS 260
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 61.9 bits (150), Expect = 3e-10
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 29/196 (14%)
Query: 533 LGEGGFGPV----YKGRLLN-GQEVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRL 586
LGEG FG V Y N G++VAVK L +SG + + K E+ ++ L H N+V+
Sbjct: 12 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71
Query: 587 LGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKKHLLGWQLR--VRI---IDGIAQDQHM 639
G C E G LI E++ + SL +L K L QL+ V+I +D + Q++
Sbjct: 72 KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYV 131
Query: 640 NP---------------KISDFGMARMFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSV 683
+ KI DFG+ + D+ K + + + +PE ++ F +
Sbjct: 132 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYI 191
Query: 684 KSDVFSFGVLMLEILS 699
SDV+SFGV + E+L+
Sbjct: 192 ASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 3e-10
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-NEMMLIAKLQHRNL 583
NF KLGEG + VYKGR G+ VA+K + + +G E+ L+ +L+H N+
Sbjct: 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60
Query: 584 VRLLGCCIEQGEKILIYEYM---VNKSLDVF----LFDPTKKHLLGWQL----------R 626
VRL + + +L++EYM + K +D DP +QL R
Sbjct: 61 VRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR 120
Query: 627 VRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNT-KRIVGTYGYMSPEYALEG-V 680
V D Q+ +N K++DFG+AR FG + NT V T Y +P+ L
Sbjct: 121 VLHRDLKPQNLLINKRGELKLADFGLARAFG---IPVNTFSNEVVTLWYRAPDVLLGSRT 177
Query: 681 FSVKSDVFSFGVLMLEILSSKK-NTGVYNTDS----FNLLG 716
+S D++S G +M E+++ + G N D F ++G
Sbjct: 178 YSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMG 218
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 4e-10
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 40/205 (19%)
Query: 526 NFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKR--LSNQSGQGLKEFKNEMMLIAKLQHRN 582
+F + KLG+G +G VYK RL + Q A+K L + S + ++ NE+ ++A + H N
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60
Query: 583 LVR-----LLGC--CI--EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGI 633
++ L G CI E + + + + L P + W++ ++++ G+
Sbjct: 61 IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLI-PEQ---EIWRIFIQLLRGL 116
Query: 634 AQDQH----------------MNP---KISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
Q H + KI D G++++ + K +GT YM+PE
Sbjct: 117 -QALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLK----KNMAKTQIGTPHYMAPE 171
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
+S KSD++S G L+ E+ +
Sbjct: 172 VWKGRPYSYKSDIWSLGCLLYEMAT 196
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 61.4 bits (150), Expect = 4e-10
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 44/202 (21%)
Query: 531 SKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN-----EMMLIAKLQHRNLV 584
KLGEG + VYK R G+ VA+K++ + K+ N E+ L+ +L+H N++
Sbjct: 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65
Query: 585 RLLGCCIEQGEKILIYEYM------VNKSLDVFLFDPTKKHLLG------WQLRVRII-- 630
LL + L++E+M V K + L K + L I
Sbjct: 66 GLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILH 125
Query: 631 ------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
DG+ K++DFG+AR FG + + V T Y +PE L
Sbjct: 126 RDLKPNNLLIASDGVL-------KLADFGLARSFGSPNRKMTHQ--VVTRWYRAPEL-LF 175
Query: 679 GV--FSVKSDVFSFGVLMLEIL 698
G + V D++S G + E+L
Sbjct: 176 GARHYGVGVDMWSVGCIFAELL 197
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 5e-10
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 31/195 (15%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSN-QSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 15 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTK----KHLLGWQLRVRIIDGI--AQDQHM- 639
LG C+ + LI + M L ++ + ++LL W V+I G+ +++ +
Sbjct: 75 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLEERRLV 131
Query: 640 ------------NP---KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
P KI+DFG+A++ G DE + + + +M+ E L +++ +
Sbjct: 132 HRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQ 191
Query: 685 SDVFSFGVLMLEILS 699
SDV+S+GV + E+++
Sbjct: 192 SDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 6e-10
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 53/212 (25%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQ----SGQGLKEFKNEMMLIAKLQ 579
+ KLGEG +G VYK R G+ VA+K RL N+ L+E L+ +L+
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREIS----LLKELK 56
Query: 580 HRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFL------FDPTK-KHLLGWQL------ 625
H N+V+LL I K+ L++EY + L +L P K ++ +QL
Sbjct: 57 HPNIVKLL-DVIHTERKLYLVFEYC-DMDLKKYLDKRPGPLSPNLIKSIM-YQLLRGLAY 113
Query: 626 --RVRII-------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
RI+ DG+ K++DFG+AR F G L+ T +V T Y
Sbjct: 114 CHSHRILHRDLKPQNILINRDGVL-------KLADFGLARAF-GIPLRTYTHEVV-TLWY 164
Query: 671 MSPEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
+PE L +S D++S G + E+++ K
Sbjct: 165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGK 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 1e-09
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 51/268 (19%)
Query: 533 LGEGGFGP--VYK----GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+G FG +Y+ L+ +EV + RLS + ++ NE+++++ LQH N++
Sbjct: 8 LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK---ERRDALNEIVILSLLQHPNIIAY 64
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL----LGWQLRVRIIDGIAQDQHMN-- 640
++ ++ EY +L + + + W L +I+ ++
Sbjct: 65 YNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYL-FQIVSAVSYIHKAGIL 123
Query: 641 ----------------PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSV 683
K+ DFG++++ G + T +VGT YMSPE +GV ++
Sbjct: 124 HRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET--VVGTPYYMSPELC-QGVKYNF 180
Query: 684 KSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743
KSD+++ G ++ E+L+ K+ D+ N L + + + + V +E L
Sbjct: 181 KSDIWALGCVLYELLTLKR-----TFDATNPLNLVVKIVQG--NYTPVVSVYSSE--LIS 231
Query: 744 LVRYINVALLCVQENAEDRPTMSDVVSM 771
LV +Q++ E RPT +V+
Sbjct: 232 LVHS------LLQQDPEKRPTADEVLDQ 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 33/202 (16%)
Query: 533 LGEGGFGPVYKG-RLLNGQEVAVKR--LSNQSGQG-------LKEFKNEMMLIAKLQHRN 582
+G G FG VY G +G+ +AVK+ L + S L E+ L+ +LQH N
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----FDPT------KKHLLGWQ------L 625
+V+ LG ++ + EY+ S+ L F+ T ++ L G +
Sbjct: 68 IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGI 127
Query: 626 RVRIIDG--IAQDQHMNPKISDFGMARMFGGDELQG--NTKR--IVGTYGYMSPEYALEG 679
R I G I D KISDFG+++ + L N R + G+ +M+PE +
Sbjct: 128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT 187
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
++ K+D++S G L++E+L+ K
Sbjct: 188 SYTRKADIWSLGCLVVEMLTGK 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 2e-09
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 348 KSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLK-NCSCRAYANSKVTDGGSGCLMW 406
KS D F +L + KLP + ++ +L+EC ++CL NCSCR++ + G GCL+W
Sbjct: 1 KSDDCFVRLPNTKLPGFSRIVIS-VASLEECASKCLNSNCSCRSFTYNN---GTKGCLLW 56
Query: 407 -FGDLIDLKKTDNHTNGVSIYIRV 429
L D + + GV +Y ++
Sbjct: 57 SESSLGDARLFPSG--GVDLYEKI 78
|
Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 2e-09
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 49/242 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLS-NQSGQGLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 74
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 75 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQM 134
Query: 618 --KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQG 659
K L+ +V R ++ +A + ++ KI+DFG+AR +
Sbjct: 135 TFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK 194
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL-- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 195 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 254
Query: 716 GH 717
GH
Sbjct: 255 GH 256
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 2e-09
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 33/200 (16%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRL----SNQ--SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+G +G VY G GQ +AVK++ SN + + ++ + E+ L+ L+H N+V+
Sbjct: 8 LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFL--FDPTKKHLLGWQLRVRIIDGIAQDQHMN---- 640
LG C++ + E++ S+ L F P + + + +I+DG+A H N
Sbjct: 68 LGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTK-QILDGVAY-LHNNCVVH 125
Query: 641 -----------P----KISDFGMARMFGGDELQGNTKRIV----GTYGYMSPEYALEGVF 681
P K+ DFG AR L G ++ GT +M+PE E +
Sbjct: 126 RDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGY 185
Query: 682 SVKSDVFSFGVLMLEILSSK 701
KSD++S G + E+ + K
Sbjct: 186 GRKSDIWSIGCTVFEMATGK 205
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 2e-09
Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 40/261 (15%)
Query: 532 KLGEGGFGPVYKGRLLNGQE-VAVKRLS---NQSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
++G G FG VY + E VAVK++S Q+ + ++ E+ + +L+H N +
Sbjct: 28 EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87
Query: 588 GCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQ---HMNPKI- 643
GC +++ L+ EY + + D L + KK L ++ I G Q H + I
Sbjct: 88 GCYLKEHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAA-ITHGALQGLAYLHSHNMIH 144
Query: 644 ----------SDFGMARM--FGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSVKSDVF 688
++ G ++ FG VGT +M+PE L EG + K DV+
Sbjct: 145 RDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVW 204
Query: 689 SFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYI 748
S G+ +E+ +++ ++N ++ + L H + +ND P LQ+ ++
Sbjct: 205 SLGITCIEL--AERKPPLFNMNAMSALYH---IAQND------SPTLQSNEWTDSFRGFV 253
Query: 749 NVALLCVQENAEDRPTMSDVV 769
+ C+Q+ ++RP ++++
Sbjct: 254 D---YCLQKIPQERPASAELL 271
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 2e-09
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 27/191 (14%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEF---KNEMMLIAKLQHRNLVRLLG 588
LG+G FG V R + G+ A+K L + KE E +++++ H +V+L
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH- 59
Query: 589 CCIEQGEKI-LIYEYMVNKSLDVFL-----FDPTKKHL--------LGWQLRVRII---- 630
+ EK+ L+ EY L L F + L + + II
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119
Query: 631 --DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVF 688
+ I D + K++DFG+A+ + + NT GT Y++PE L + D +
Sbjct: 120 KPENILLDADGHIKLTDFGLAKELSSEGSRTNT--FCGTPEYLAPEVLLGKGYGKAVDWW 177
Query: 689 SFGVLMLEILS 699
S GVL+ E+L+
Sbjct: 178 SLGVLLYEMLT 188
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 3e-09
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 47/217 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL---NGQEVAVKRLSNQSGQG-LKEFKNEMMLIAKL-Q 579
E+ + +GEG FG V + + A+K L + + ++F E+ ++ KL
Sbjct: 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGH 61
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------FDPT--KKHLLGWQLRVRII 630
H N++ LLG C +G + EY +L FL DP K+H L + +
Sbjct: 62 HPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQL 121
Query: 631 DGIAQD--------------------------QHMNPKISDFGMARMFGGDELQGNTKRI 664
A D +++ KI+DFG++R G+E+ K+
Sbjct: 122 LQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR---GEEVY--VKKT 176
Query: 665 VGTYG--YMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+G +M+ E V++ KSDV+SFGVL+ EI+S
Sbjct: 177 MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 4e-09
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 53/236 (22%)
Query: 533 LGEGGFGPVYKGRLLNGQE--------VAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V + + VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 26 LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++PT+ K L+
Sbjct: 86 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145
Query: 624 QLRV-RIIDGIA-----------------QDQHMNPKISDFGMARMFGGDELQGNTKRIV 665
+V R ++ +A +D M KI+DFG+AR + T
Sbjct: 146 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDYYKKTTNGR 203
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 204 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 259
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 4e-09
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 28/201 (13%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRN 582
NF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H N
Sbjct: 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60
Query: 583 LVRLLGCCIEQGEKILIYEYM---VNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA----- 634
+V+LL + + L++E++ + K +D L+ L +++ G+A
Sbjct: 61 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYL-FQLLQGLAFCHSH 119
Query: 635 ---------QDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
Q+ +N K++DFG+AR F G ++ T +V T Y +PE L +
Sbjct: 120 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 177
Query: 682 -SVKSDVFSFGVLMLEILSSK 701
S D++S G + E+++ +
Sbjct: 178 YSTAVDIWSLGCIFAEMVTRR 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 58/213 (27%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQG------LKEFKNEMMLIAKL 578
+ I ++GEG G V+K + G+ VA+K+++ + +G L+E K +
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIK----ALQAC 56
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM------VNKSLDVFLFDPTKKHLLGWQLRVRIIDG 632
QH +V+LL +L+ EYM V + + L + K + ++ G
Sbjct: 57 QHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYM-----RMLLKG 111
Query: 633 IAQDQHMN----------P-----------KISDFGMARMFGGDELQGNTKRIVGTYGYM 671
+A +M+ P KI+DFG+AR+F +E + + + V T Y
Sbjct: 112 VA---YMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ-VATRWYR 167
Query: 672 SPEYAL------EGVFSVKSDVFSFGVLMLEIL 698
+PE GV D+++ G + E+L
Sbjct: 168 APELLYGARKYDPGV-----DLWAVGCIFAELL 195
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 5e-09
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 35/199 (17%)
Query: 532 KLGEGGFGPVYKGR-LLNGQEVAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHRNLVRLLG 588
K+GEG +G VYK R + + +A+K++ Q +G+ E+ L+ ++QH N+VRL
Sbjct: 9 KIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
Query: 589 CCIEQGEKILIYEYM---VNKSLDV---FLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+ L++EY+ + K +D F +P +Q I+ GIA
Sbjct: 69 VVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQ----ILRGIAYCHSHRVL 124
Query: 636 -----------DQHMNP-KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG-VFS 682
D+ N K++DFG+AR F G ++ T +V T Y +PE L +S
Sbjct: 125 HRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEVV-TLWYRAPEILLGSRHYS 182
Query: 683 VKSDVFSFGVLMLEILSSK 701
D++S G + E+++ K
Sbjct: 183 TPVDIWSVGCIFAEMVNQK 201
|
Length = 294 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 5e-09
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 50/190 (26%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQ------GLKEFKNEMMLI 575
++ I KLGEG FG VYK R + G+ VA+K++ + + L+E K ++
Sbjct: 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIK----IL 61
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVR---- 628
KL+H N+V L+ +E+ +K K V++ P H L L V+
Sbjct: 62 KKLKHPNVVPLIDMAVERPDKSK------RKRGSVYMVTPYMDHDLSGLLENPSVKLTES 115
Query: 629 --------IIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTK 662
+++GI D KI+DFG+AR + G
Sbjct: 116 QIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGG 175
Query: 663 RIVGTYGYMS 672
GT Y +
Sbjct: 176 GGGGTRKYTN 185
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 5e-09
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 33/204 (16%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKE---FKNEMMLIAKLQHRN 582
+ I K+GEG FG +Y + + E V + + + +KE K E++L+AK++H N
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60
Query: 583 LVRLLGCCIEQGEKILIYEY--------MVNKSLDVFLFDPTKKHLLGWQLRV------- 627
+V E G ++ EY +N+ V ++ +L W +++
Sbjct: 61 IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLF---SEDQILSWFVQISLGLKHI 117
Query: 628 ---RIIDGIAQDQH-------MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+I+ + Q+ M K+ DFG+AR T VGT Y+SPE
Sbjct: 118 HDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT--CVGTPYYLSPEICQ 175
Query: 678 EGVFSVKSDVFSFGVLMLEILSSK 701
++ K+D++S G ++ E+ + K
Sbjct: 176 NRPYNNKTDIWSLGCVLYELCTLK 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 5e-09
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 63/225 (28%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN---GQEVAVKRL--SNQSGQGLKEFK-NEMMLIAKLQH 580
+ I+ +G G +G VYK + N G+E A+K+ + G+ + E+ L+ +L+H
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61
Query: 581 RNLVRLLGCCIEQGEKI--LIYEYMVNKSLDVFLF----------DPTKKHLLGWQLRVR 628
N+V L+ +E +K L+++Y + + F K LL WQ
Sbjct: 62 ENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLL-WQ---- 116
Query: 629 IIDGIAQDQHMN--------P---------------KISDFGMARMF--------GGDEL 657
I++G+ H N P KI D G+AR+F D
Sbjct: 117 ILNGVHY-LHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLD-- 173
Query: 658 QGNTKRIVGTYGYMSPEYALEGVFSVKS-DVFSFGVLMLEILSSK 701
+V T Y +PE L K+ D+++ G + E+L+ +
Sbjct: 174 -----PVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLE 213
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 5e-09
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 38/198 (19%)
Query: 532 KLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRNLVRLLGC 589
++G G FG V+ GRL + VAVK LK +F E ++ + H N+VRL+G
Sbjct: 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 61
Query: 590 CIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII-----DGIAQDQHMNP--- 641
C ++ ++ E + FL G +L+V+ + + A +++
Sbjct: 62 CTQKQPIYIVMELVQGGDFLTFLRTE------GPRLKVKELIQMVENAAAGMEYLESKHC 115
Query: 642 ------------------KISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEYALEGVF 681
KISDFGM+R G G K+I + +PE G +
Sbjct: 116 IHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI--PVKWTAPEALNYGRY 173
Query: 682 SVKSDVFSFGVLMLEILS 699
S +SDV+SFG+L+ E S
Sbjct: 174 SSESDVWSFGILLWEAFS 191
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 8e-09
Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
+ + I +LG+G FG VYK + G A K + +S + L++F E+ ++++ +H N
Sbjct: 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPN 63
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDG------- 632
+V L + + ++ E+ +LD + ++ L Q+R ++++
Sbjct: 64 IVGLYEAYFYENKLWILIEFCDGGALDS-IMLELERGLTEPQIRYVCRQMLEALNFLHSH 122
Query: 633 --IAQD---------QHMNPKISDFGMARMFGGDELQGNTKR--IVGTYGYMSPEYALEG 679
I +D + K++DFG++ LQ KR +GT +M+PE
Sbjct: 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAK-NKSTLQ---KRDTFIGTPYWMAPEVVACE 178
Query: 680 VFS-----VKSDVFSFGVLMLEI 697
F K+D++S G+ ++E+
Sbjct: 179 TFKDNPYDYKADIWSLGITLIEL 201
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 532 KLGEGGFGPVYKG--RLLNGQ-EVAVKRLSNQSGQGLKEFKNEMMLIAKLQHR----NLV 584
+LG G FG V KG ++ Q +VA+K L N++ K ++EMM A++ H+ +V
Sbjct: 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE---KSVRDEMMREAEIMHQLDNPYIV 58
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK------------------KHLLGWQLR 626
R++G C E +L+ E L+ FL K+L G
Sbjct: 59 RMIGVC-EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFV 117
Query: 627 VRIIDG---IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
R + + +QH KISDFG+++ G D+ R G + + +PE F
Sbjct: 118 HRDLAARNVLLVNQHY-AKISDFGLSKALGADD-SYYKARSAGKWPLKWYAPECINFRKF 175
Query: 682 SVKSDVFSFGVLMLEILS 699
S +SDV+S+G+ M E S
Sbjct: 176 SSRSDVWSYGITMWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 41/219 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKG--RLLNGQE--VAVKRLSNQSGQGLKE-FKNEMMLIAKLQ 579
E+ ++ +GEG FG VY+G ++ VAVK N + ++E F E ++ +
Sbjct: 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD 65
Query: 580 HRNLVRLLGCCIEQ-----------GE---------------KILIYEYMVNKSLDVFLF 613
H ++V+L+G E GE +++Y Y ++ +L +L
Sbjct: 66 HPHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTAL-AYL- 123
Query: 614 DPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
K + + R + + D K+ DFG++R + +K + +M+P
Sbjct: 124 --ESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYYKASKGKL-PIKWMAP 177
Query: 674 EYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTD 710
E F+ SDV+ FGV M EIL K GV N D
Sbjct: 178 ESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND 216
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 41/200 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG V+KG + + VA+K + ++SG Q +E + M+ + L H +VRL
Sbjct: 15 LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74
Query: 587 LGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRVRIIDGI--AQ 635
LG C G + L+ + S L D ++H LL W V+I G+ +
Sbjct: 75 LGIC--PGASLQLVTQLSPLGS----LLDHVRQHRDSLDPQRLLNWC--VQIAKGMYYLE 126
Query: 636 DQHM----------------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
+ M +I+DFG+A + D+ + +M+ E L G
Sbjct: 127 EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFG 186
Query: 680 VFSVKSDVFSFGVLMLEILS 699
++ +SDV+S+GV + E++S
Sbjct: 187 RYTHQSDVWSYGVTVWEMMS 206
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 2e-08
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 45/212 (21%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + VAVK L + + + L + +EM ++ + +H+N
Sbjct: 20 LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G ++ EY +L +L FD K K L+
Sbjct: 80 IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 140 AYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLP 199
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++ +SDV+SFGVL+ EI +
Sbjct: 200 VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 3e-08
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 49/233 (21%)
Query: 527 FSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQH 580
F++ LG+G FG V + +L + Q+VAVK L S ++EF E + + H
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60
Query: 581 RNLVRLLGCCIEQGEK------ILIYEYMVNKSLDVFLF------DPTKKHLLGWQLRVR 628
N+++L+G + K ++I +M + L FL +P L Q VR
Sbjct: 61 PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFT---LPLQTLVR 117
Query: 629 IIDGIAQ----------------------DQHMNPKISDFGMAR-MFGGDEL-QGNTKRI 664
+ IA +++M ++DFG+++ ++ GD QG ++
Sbjct: 118 FMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKL 177
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLL 715
+++ E + V++ SDV++FGV M EI++ + GV N++ +N L
Sbjct: 178 --PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYL 228
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-08
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 38/210 (18%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
F I ++GEG +G VYK R G+ VA+K RL N+ E+ ++ +L HRN+
Sbjct: 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI 68
Query: 584 VRLLGCCI----------EQGEKILIYEYM---VNKSLDVFLFDPTKKHLLGWQLRVRII 630
V L ++G L++EYM + L+ L ++ H+ +++
Sbjct: 69 VNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIK--SFMKQLL 126
Query: 631 DGIA--QDQH------------MNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
+G+ ++ +N K++DFG+AR++ +E + T +++ T Y
Sbjct: 127 EGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVI-TLWYRP 185
Query: 673 PEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
PE L E + DV+S G ++ E+ + K
Sbjct: 186 PELLLGEERYGPAIDVWSCGCILGELFTKK 215
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 36/198 (18%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRL-- 586
LG+GGFG V ++ G+ A K+L + +G + NE ++ K+ R +V L
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60
Query: 587 ---------LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL--------RVRI 629
L + G + + Y V + F + Q+ + RI
Sbjct: 61 AFETKDDLCLVMTLMNGGDLKYHIYNVGEPG----FPEARAIFYAAQIICGLEHLHQRRI 116
Query: 630 I------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
+ + + D H N +ISD G+A G K GT GYM+PE V+
Sbjct: 117 VYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGRAGTPGYMAPEVLQGEVYDF 173
Query: 684 KSDVFSFGVLMLEILSSK 701
D F+ G + E+++ +
Sbjct: 174 SVDWFALGCTLYEMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 5e-08
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRL-----SNQSGQGLKEFKNEMMLIAKLQ 579
N+ + LG+G FG VY + G+E+AVK++ S ++ + + + E+ L+ L
Sbjct: 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL 62
Query: 580 HRNLVRLLGCCIEQGEKIL--IYEYMVN-------KSLDVFLFDPTKK---------HLL 621
H +V+ GC + E+ L E+M KS + T+K L
Sbjct: 63 HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYL 122
Query: 622 GWQLRV-RIIDG--IAQDQHMNPKISDFGMARMFGGDELQGN-TKRIVGTYGYMSPEYAL 677
+ V R I G I +D N K+ DFG ++ L G K + GT +MSPE
Sbjct: 123 HSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS 182
Query: 678 EGVFSVKSDVFSFGVLMLEILSSK 701
+ K+D++S G ++E+L+ K
Sbjct: 183 GEGYGRKADIWSVGCTVVEMLTEK 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 5e-08
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 37/204 (18%)
Query: 531 SKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQS---GQGLKEFKNEMML--IAKLQHRNL 583
+++GEG +G V+K R L G+ VA+KR+ Q+ G L + +L + +H N+
Sbjct: 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 66
Query: 584 VRLLGCCI-----EQGEKILIYEYMVNKSLDVFLF---DP-----TKKHLLGWQLR---- 626
VRL C + + L++E+ V++ L +L +P T K ++ LR
Sbjct: 67 VRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 125
Query: 627 ---VRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
R++ + Q++ K++DFG+AR++ Q +V T Y +PE L
Sbjct: 126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEVLL 182
Query: 678 EGVFSVKSDVFSFGVLMLEILSSK 701
+ ++ D++S G + E+ K
Sbjct: 183 QSSYATPVDLWSVGCIFAEMFRRK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 5e-08
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRN 582
E F+ ++G+G FG VYKG +EV A+K + + + +++ + E+ ++++
Sbjct: 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ R G ++ + +I EY+ S LD+ P ++ + LR I+ G
Sbjct: 64 ITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR-EILKGLDYLHSERK 122
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D + + K++DFG+A +++ NT VGT +M+PE + +
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDF 180
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 181 KADIWSLGITAIEL 194
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 5e-08
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 63/217 (29%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN--------EMMLIAK 577
+ + +LG+G FG VY R G+ VA+K++ K+F + E+ + K
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMK-------KKFYSWEECMNLREVKSLRK 53
Query: 578 LQ-HRNLVRLLGCCIEQGEKILIYEYMVN------KSLDVFLFDPTK-KHLLGWQLRVRI 629
L H N+V+L E E ++EYM K F + + ++ +Q I
Sbjct: 54 LNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSII-YQ----I 108
Query: 630 IDGIAQDQHMN----------P-----------KISDFGMARMFGGDELQGN---TKRIV 665
+ G+A H++ P KI+DFG+AR E++ T V
Sbjct: 109 LQGLA---HIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAR-----EIRSRPPYTD-YV 159
Query: 666 GTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSK 701
T Y +PE L +S D+++ G +M E+ + +
Sbjct: 160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLR 196
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 5e-08
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 77/282 (27%)
Query: 532 KLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQG--LKEFKNEMMLIAKLQHRNLVRLLG 588
K+G G FG VY L+ E+ AVK + Q +KE +EM ++ L+H NLV+ G
Sbjct: 7 KIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYG 66
Query: 589 CCIEQGEKILIY-EYMVNKSLDVFLFDPTKKHLLGWQLRV------RIIDGIAQDQHMN- 640
+ + EK+ I+ EY +L+ L +H V ++++G+A H +
Sbjct: 67 VEVHR-EKVYIFMEYCSGGTLEELL-----EHGRILDEHVIRVYTLQLLEGLAY-LHSHG 119
Query: 641 -------P-----------KISDFGMARMFG------GDELQGNTKRIVGTYGYMSPEYA 676
P K+ DFG A G+E+Q + GT YM+PE
Sbjct: 120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQS----LAGTPAYMAPEVI 175
Query: 677 LEGVFSVK---SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM-- 731
G +D++S G ++LE+ + K WS N+ ++M
Sbjct: 176 TGGKGKGHGRAADIWSLGCVVLEMATGK---------------RPWSELDNE--FQIMFH 218
Query: 732 -----DPVL-QNEVSLPMLVRYINVALLCVQENAEDRPTMSD 767
P + + P +++ C++ + + RPT S+
Sbjct: 219 VGAGHKPPIPDSLQLSPEGKDFLD---RCLESDPKKRPTASE 257
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 6e-08
Identities = 61/273 (22%), Positives = 110/273 (40%), Gaps = 37/273 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGL-KEFKNEMMLIAKLQHRN 582
E+ S LG G G V K + G +A K + + + K+ E+ ++ + +
Sbjct: 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPY 64
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL--FDPTKKHLLGWQLRVRIIDG-------- 632
+V G + + + E+M SLD P +LG ++ V +++G
Sbjct: 65 IVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILG-KIAVAVVEGLTYLYNVH 123
Query: 633 -----------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
I + K+ DFG++ G+ + VGT YMSPE G +
Sbjct: 124 RIMHRDIKPSNILVNSRGQIKLCDFGVS----GELINSIADTFVGTSTYMSPERIQGGKY 179
Query: 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD---PVLQNE 738
+VKSDV+S G+ ++E+ K N D L D +++ P L +
Sbjct: 180 TVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGIL---DLLQQIVQEPPPRLPSS 236
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771
L +++ C+ ++ +RPT + +M
Sbjct: 237 DFPEDLRDFVD---ACLLKDPTERPTPQQLCAM 266
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 7e-08
Identities = 63/199 (31%), Positives = 93/199 (46%), Gaps = 38/199 (19%)
Query: 532 KLGEGGFGPVYKG--RLLNGQE-VAVKRLSNQSGQGLKEFKNEMMLIAK----LQHRNLV 584
+LG G FG V KG ++ ++ VAVK L N + K+E++ A L + +V
Sbjct: 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND--PALKDELLREANVMQQLDNPYIV 59
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP---TKKHLLGWQLRVRI------------ 629
R++G C E +L+ E L+ FL T+K++ +V +
Sbjct: 60 RMIGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVH 118
Query: 630 IDGIAQD-----QHMNPKISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGV 680
D A++ QH KISDFG+++ G DE + + K V Y +PE
Sbjct: 119 RDLAARNVLLVTQHY-AKISDFGLSKALGADENYYKAKTHGKWPVKWY---APECMNYYK 174
Query: 681 FSVKSDVFSFGVLMLEILS 699
FS KSDV+SFGVLM E S
Sbjct: 175 FSSKSDVWSFGVLMWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 7e-08
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 47/209 (22%)
Query: 533 LGEGGFGPVYKGRLLNG---QEVAVKRLSNQSGQG-LKEFKNEMMLIAKL-QHRNLVRLL 587
+GEG FG V K R+ + A+KR+ + + ++F E+ ++ KL H N++ LL
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62
Query: 588 GCCIEQGEKILIYEYMVNKSLDVFL-------FDPT--KKHLLGWQLRVRIIDGIAQD-- 636
G C +G L EY + +L FL DP + L + + A D
Sbjct: 63 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122
Query: 637 ------------------------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYG--Y 670
++ KI+DFG++R G E+ K+ +G +
Sbjct: 123 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVY--VKKTMGRLPVRW 177
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILS 699
M+ E V++ SDV+S+GVL+ EI+S
Sbjct: 178 MAIESLNYSVYTTNSDVWSYGVLLWEIVS 206
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 7e-08
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 525 ENFSIQSKLGEGGFGPVY------KGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL 578
N+ + LG G FG VY GR L ++V S ++ + + + E+ L+ L
Sbjct: 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL 61
Query: 579 QHRNLVRLLGCCIEQGEKIL--IYEYMVN-------KSLDVFLFDPTKK----------H 619
+H +V+ GC + EK L EYM K+ + T++ +
Sbjct: 62 RHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSY 121
Query: 620 LLGWQLRVRIIDG--IAQDQHMNPKISDFGMARMFGGDELQGN-TKRIVGTYGYMSPEYA 676
L + R I G I +D N K+ DFG ++ + G K + GT +MSPE
Sbjct: 122 LHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVI 181
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K+DV+S ++E+L+ K
Sbjct: 182 SGEGYGRKADVWSVACTVVEMLTEK 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 8e-08
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 64/224 (28%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG------------------LKEFKNEMM 573
LGEG +G V K L G+ VA+K++ L+E K
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELK---- 72
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYM---VNKSLD--VFLFDPTKKHLLGWQLRVR 628
++ +++H N++ L+ +E L+ + M + K +D + L + K +L Q
Sbjct: 73 IMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCIL-LQ---- 127
Query: 629 IIDGIAQ-------DQHMNP-----------KISDFGMARMFGGDELQGNTKRI------ 664
I++G+ + ++P KI+DFG+AR +G +
Sbjct: 128 ILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRR 187
Query: 665 ------VGTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
V T Y +PE + + D++S G + E+L+ K
Sbjct: 188 EEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231
|
Length = 335 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 8e-08
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 36/204 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN----EMMLIAKLQ 579
+ + +GEG +G V K R G+ VA+K+ + + ++ K E+ ++ +L+
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKF--KESEDDEDVKKTALREVKVLRQLR 58
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----FDPTKKHLLGWQL--------R 626
H N+V L +G L++EY+ L++ P WQL
Sbjct: 59 HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHS 118
Query: 627 VRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKR----IVGTYGYMSPEYA 676
II + I + K+ DFG AR L+ V T Y +PE
Sbjct: 119 HNIIHRDIKPENILVSESGVLKLCDFGFAR-----ALRARPASPLTDYVATRWYRAPELL 173
Query: 677 LEGVFSVKS-DVFSFGVLMLEILS 699
+ K DV++ G +M E+L
Sbjct: 174 VGDTNYGKPVDVWAIGCIMAELLD 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 1e-07
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 53/270 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L N S + KE +E ++A + + RL
Sbjct: 15 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLR----------VR 628
LG C+ + L+ + M L D +++ LL W ++ VR
Sbjct: 75 LGICLTSTVQ-LVTQLMPYGCL----LDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129
Query: 629 II--DGIAQDQHM-NP---KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
++ D A++ + +P KI+DFG+AR+ DE + + +M+ E L F+
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFT 189
Query: 683 VKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740
+SDV+S+GV + E+++ +K G+ + +LL K +R + P+ +V
Sbjct: 190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE------KGERLPQ--PPICTIDVY 241
Query: 741 LPMLVRYINVALLCVQENAEDRPTMSDVVS 770
+ M+ C ++E RP ++V
Sbjct: 242 MIMVK--------CWMIDSECRPRFRELVD 263
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 642 KISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
KI DFG+AR D ++ R+ +M+PE + V++ +SDV+SFGVL+ EI S
Sbjct: 213 KICDFGLARDIYKDPDYVRKGDARL--PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 270
Query: 700 --SKKNTGVYNTDSF-NLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQ 756
+ GV + F L + + A E+ ML C
Sbjct: 271 LGASPYPGVQIDEEFCRRLKEGTRMRAPEYATP--------EIYSIMLD--------CWH 314
Query: 757 ENAEDRPTMSDVVSMINNEL 776
N EDRPT S++V ++ + L
Sbjct: 315 NNPEDRPTFSELVEILGDLL 334
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 1e-07
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 40/199 (20%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSG-QGLKEFK-NEMMLIAKLQ---HRNLVRL 586
+GEG +G VYK R L G+ VA+K++ +G+ E+ L+ +L+ H N+VRL
Sbjct: 7 IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRL 66
Query: 587 LGCC-IEQGEKI----LIYEYMVNKSLDVFL-------FDPTK-KHLLGWQLR------- 626
L C + ++ L++E+ V++ L +L P K L+ LR
Sbjct: 67 LDVCHGPRTDRELKLTLVFEH-VDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS 125
Query: 627 VRIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RI+ + D + KI+DFG+AR++ + +V T Y +PE L+
Sbjct: 126 HRIVHRDLKPQNILVTSDGQV--KIADFGLARIYS---FEMALTSVVVTLWYRAPEVLLQ 180
Query: 679 GVFSVKSDVFSFGVLMLEI 697
++ D++S G + E+
Sbjct: 181 SSYATPVDMWSVGCIFAEL 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 54/211 (25%)
Query: 528 SIQSKLGEGGFGPVYKG--RLLNGQE--VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRN 582
I+ LG G FG + +G +L + +E VA+ L + S + + F E + + + H N
Sbjct: 8 KIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSN 67
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH---LLGWQLRVRIIDGIAQ---- 635
+VRL G +++ EYM N +LD FL +KH L+ QL + ++ G+A
Sbjct: 68 IVRLEGVITRGNTMMIVTEYMSNGALDSFL----RKHEGQLVAGQL-MGMLPGLASGMKY 122
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS----- 672
+ + KIS F + + Y MS
Sbjct: 123 LSEMGYVHKGLAAHKVLVNSDLVCKISGFR----------RLQEDKSEAIYTTMSGKSPV 172
Query: 673 ----PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE FS SDV+SFG++M E++S
Sbjct: 173 LWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 53.6 bits (128), Expect = 1e-07
Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEM 572
L + S+ + ++ K+G+G G V+ + GQEVA+K+++ Q + NE+
Sbjct: 8 LRTIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEI 67
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL-DVFL---FDPTK----------- 617
+++ +L++ N+V L + E ++ EY+ SL DV D +
Sbjct: 68 LVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQA 127
Query: 618 -KHLLGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+ L Q+ R I D + + K++DFG ++ + +T +VGT +M+PE
Sbjct: 128 LEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPE 185
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S G++ +E++ +
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 63/220 (28%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL---SNQSG---QGLKEFKNEMMLIAK 577
+ + +++ EG +G VY+ R G+ VA+K+L + G L+E N ++ K
Sbjct: 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREI-NILL---K 60
Query: 578 LQHRNLVRL----LGCCIEQGEKILIY---EYMVN--KSL-----DVFLFDPTKKHLLGW 623
LQH N+V + +G +++ IY EY+ + KSL FL K +L
Sbjct: 61 LQHPNIVTVKEVVVGSNLDK-----IYMVMEYVEHDLKSLMETMKQPFLQSEVKCLML-- 113
Query: 624 QLRVRIIDGIAQDQHMNP---------------------KISDFGMARMFGGDELQGNTK 662
QL + G+A H++ KI DFG+AR + G L+ T+
Sbjct: 114 QL----LSGVA---HLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREY-GSPLKPYTQ 165
Query: 663 RIVGTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
+V T Y +PE L +S D++S G + E+L+ K
Sbjct: 166 LVV-TLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRN 582
+++ + +G G VY L N ++VA+KR+ + + E + E+ +++ H N
Sbjct: 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPN 60
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKK---------------------HL 620
+V+ + E L+ Y+ S LD+ + H
Sbjct: 61 VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS 120
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEYALE 678
G R I + + KI+DFG++ GGD + K VGT +M+PE +
Sbjct: 121 NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQ 180
Query: 679 GV-FSVKSDVFSFGVLMLEI 697
+ K+D++SFG+ +E+
Sbjct: 181 VHGYDFKADIWSFGITAIEL 200
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 52/210 (24%), Positives = 82/210 (39%), Gaps = 46/210 (21%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQ---SGQGLKEFKNEMMLIAKLQHR 581
+F + +G+G FG V + + +++ A+K ++ Q ++ NE ++ +L H
Sbjct: 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV-------------- 627
LV L Q E+ Y+V +D+ L + HL Q
Sbjct: 61 FLVNL--WYSFQDEE---NMYLV---VDLLLGGDLRYHLS--QKVKFSEEQVKFWICEIV 110
Query: 628 ---------RII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
II D I D+ + I+DF +A D T GT GYM+
Sbjct: 111 LALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMA 167
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILSSKK 702
PE +SV D +S GV E L K+
Sbjct: 168 PEVLCRQGYSVAVDWWSLGVTAYECLRGKR 197
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 4e-07
Identities = 48/207 (23%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKEFKNEM 572
L S SV + ++ K+G+G G VY + GQEVA+K+++ Q + NE+
Sbjct: 8 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEI 67
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL-DVFLFDPTKKHLLGWQLR--VRI 629
+++ + ++ N+V L + E ++ EY+ SL DV + + R ++
Sbjct: 68 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 127
Query: 630 IDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+D + +Q ++ K++DFG ++ + +T +VGT +M+PE
Sbjct: 128 LDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPE 185
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S G++ +E++ +
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 5e-07
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 28/195 (14%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKE---FKNEMMLIAKLQHRNLVRLLGC 589
+G G FG V+ R Q++ + + E +NE ++ L H N++
Sbjct: 8 VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67
Query: 590 CIEQGEKILIYEY--------MVNKSLDVFLFDPTKKH-----LLGWQ-LRVRII----- 630
+E +++ EY + K + L + T H LL + ++I
Sbjct: 68 FLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDL 127
Query: 631 --DGIAQDQH-MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDV 687
I D+H M KI DFG++++ + +VGT Y+SPE ++ KSD+
Sbjct: 128 KTQNILLDKHKMVVKIGDFGISKILSS---KSKAYTVVGTPCYISPELCEGKPYNQKSDI 184
Query: 688 FSFGVLMLEILSSKK 702
++ G ++ E+ S K+
Sbjct: 185 WALGCVLYELASLKR 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGL-KEFKNEMMLIAKLQHRN 582
E S+LGEG G V K RL N + A+K ++ L K+ E+ + +
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60
Query: 583 LVRLLGCCIE--QGEKILIYEYMVNKSLDVFLFDPTKK------HLLGWQLRV------- 627
+V+ G ++ + EY SLD K+ +LG ++
Sbjct: 61 IVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLG---KIAESVLKG 117
Query: 628 -------RII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+II I + K+ DFG++ G+ + GT YM+PE
Sbjct: 118 LSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVS----GELVNSLAGTFTGTSFYMAPE 173
Query: 675 YALEGVFSVKSDVFSFGVLMLEI 697
+S+ SDV+S G+ +LE+
Sbjct: 174 RIQGKPYSITSDVWSLGLTLLEV 196
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 7e-07
Identities = 45/194 (23%), Positives = 95/194 (48%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRN 582
E F+ ++G+G FG V+KG Q+V A+K + + + +++ + E+ ++++
Sbjct: 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ + G ++ + +I EY+ S LD+ P + + L+ I+ G
Sbjct: 64 VTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLHSEKK 122
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D + + K++DFG+A +++ NT VGT +M+PE + +
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDS 180
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 181 KADIWSLGITAIEL 194
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-07
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 47/203 (23%)
Query: 531 SKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN--EMMLIAKLQ-HRNLVRL 586
K+GEG F V K + G+ A+K + + + L++ N E+ + +L H N++RL
Sbjct: 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCM-KKHFKSLEQVNNLREIQALRRLSPHPNILRL 63
Query: 587 LGCCIEQ--GEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVR-----IIDGIAQDQ 637
+ ++ G L++E M D+ L++ K K L + RV+ ++ +
Sbjct: 64 IEVLFDRKTGRLALVFELM-----DMNLYELIKGRKRPLP-EKRVKSYMYQLLKSL---D 114
Query: 638 HMN----------P----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
HM+ P K++DFG R G T+ I T Y +PE L
Sbjct: 115 HMHRNGIFHRDIKPENILIKDDILKLADFGSCR--GIYSKPPYTEYI-STRWYRAPECLL 171
Query: 678 -EGVFSVKSDVFSFGVLMLEILS 699
+G + K D+++ G + EILS
Sbjct: 172 TDGYYGPKMDIWAVGCVFFEILS 194
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 8e-07
Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 54/276 (19%)
Query: 533 LGEGGFGPVYKG-RLLNGQEVAVK------RLSNQSGQGLKE----FKNEMMLIAKLQHR 581
+G+G +G VY + G+ +AVK ++ + K+ ++E+ + L H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 582 NLVRLLGCCIEQGEKIL-IY-EYMVNKSLDVFLFDPTK------KHLLGWQL-------- 625
N+V+ LG E E+ L I+ EY+ S+ L + + L
Sbjct: 69 NIVQYLGF--ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHS 126
Query: 626 -----RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN--TKRIVGTYGYMSPE--YA 676
R D + D KISDFG+++ D++ N + G+ +M+PE ++
Sbjct: 127 KGILHRDLKADNLLVDADGICKISDFGISKK--SDDIYDNDQNMSMQGSVFWMAPEVIHS 184
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
+S K D++S G ++LE+ + ++ + + L A P +
Sbjct: 185 YSQGYSAKVDIWSLGCVVLEMFAGRRPWS-----DEEAIAAMFKLGNKRSA-----PPIP 234
Query: 737 NEVSLPMLVRYINVALL--CVQENAEDRPTMSDVVS 770
+VS M + + + L C N ++RPT +++
Sbjct: 235 PDVS--MNLSPVALDFLNACFTINPDNRPTARELLQ 268
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 8e-07
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 642 KISDFGMARMFGGDE---LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
KI DFG+AR D ++GN + V +M+PE + V++V+SDV+S+G+L+ EI
Sbjct: 252 KICDFGLARDIMNDSNYVVKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIF 308
Query: 699 SSKKN---TGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCV 755
S K+ + N+ + ++ + + + D A + +++ +C
Sbjct: 309 SLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMK----------------MCW 352
Query: 756 QENAEDRPTMSDVVSMINNEL 776
+RPT S + +I +L
Sbjct: 353 NLEPTERPTFSQISQLIQRQL 373
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 9e-07
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 531 SKLGEGGFGPVYKGR-LLNGQEVAVKRL---SNQSGQGLKEFKNEMMLIAKLQ---HRNL 583
+++G G +G VYK R +G VA+K + +N+ G L + E+ L+ +L+ H N+
Sbjct: 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVR-EVALLKRLEAFDHPNI 64
Query: 584 VRLLGCC----IEQGEKI-LIYEYMVNKSLDVFL-------------FDPTKKHLLGWQ- 624
VRL+ C ++ K+ L++E+ V++ L +L D ++ L G
Sbjct: 65 VRLMDVCATSRTDRETKVTLVFEH-VDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDF 123
Query: 625 LRVRII-------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
L I + I K++DFG+AR++ Q +V T Y +PE L
Sbjct: 124 LHANCIVHRDLKPENILVTSGGQVKLADFGLARIY---SCQMALTPVVVTLWYRAPEVLL 180
Query: 678 EGVFSVKSDVFSFGVLMLEILSSK 701
+ ++ D++S G + E+ K
Sbjct: 181 QSTYATPVDMWSVGCIFAEMFRRK 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 1e-06
Identities = 48/194 (24%), Positives = 95/194 (48%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRN 582
E F+ K+G+G FG V+KG Q+V A+K + + + +++ + E+ ++++
Sbjct: 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ + G ++ + +I EY+ S LD+ P + + LR I+ G
Sbjct: 64 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-EILKGLDYLHSEKK 122
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D +H K++DFG+A +++ NT VGT +M+PE + +
Sbjct: 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 180
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 181 KADIWSLGITAIEL 194
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 1e-06
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 34/200 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E++ + ++G G +G VYK R + G+ VA+K + + G + + E+ ++ + +H N+
Sbjct: 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI 62
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSL-DVF--LFDP---------TKKHLLGW----QLRV 627
V G + + + ++ EY SL D++ P ++ L G +
Sbjct: 63 VAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGK 122
Query: 628 --RIIDG--IAQDQHMNPKISDFGMARMFGGDELQGNT--KR--IVGTYGYMSPEYALE- 678
R I G I + + K++DFG++ T KR +GT +M+PE A
Sbjct: 123 IHRDIKGANILLTEDGDVKLADFGVSAQL------TATIAKRKSFIGTPYWMAPEVAAVE 176
Query: 679 --GVFSVKSDVFSFGVLMLE 696
G + K D+++ G+ +E
Sbjct: 177 RKGGYDGKCDIWALGITAIE 196
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 50.9 bits (121), Expect = 1e-06
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEM 572
L S SV + ++ K+G+G G VY + GQEVA+++++ Q + NE+
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--------------- 617
+++ + ++ N+V L + E ++ EY+ SL + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 618 -KHLLGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+ L Q+ R I D I + K++DFG + Q +VGT +M+PE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYWMAPE 186
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S G++ +E++ +
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRN 582
++ Q LG G G VYK LL + +AVK + + + + K+ +E+ ++ K
Sbjct: 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPY 60
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLG-------------WQLRVRI 629
++ G + + E+M SLDV+ P +H+LG W L++
Sbjct: 61 IIGFYGAFFVENRISICTEFMDGGSLDVYRKIP--EHVLGRIAVAVVKGLTYLWSLKILH 118
Query: 630 IDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKS 685
D + +N K+ DFG++ + K VGT YM+PE + + S
Sbjct: 119 RDVKPSNMLVNTRGQVKLCDFGVSTQL----VNSIAKTYVGTNAYMAPERISGEQYGIHS 174
Query: 686 DVFSFGVLMLEI 697
DV+S G+ +E+
Sbjct: 175 DVWSLGISFMEL 186
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 50/214 (23%), Positives = 81/214 (37%), Gaps = 47/214 (21%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QH 580
T F + +GEG +G VYK R GQ VA+K + +E K E ++ K H
Sbjct: 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII-EDEEEEIKEEYNILRKYSNH 62
Query: 581 RNLVRLLGCCIEQGEKI------LIYEY--------MVNKSLDVFLFDPTKKHLLGWQLR 626
N+ G I++ L+ E +V K+ + + LR
Sbjct: 63 PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRK--KGKRLKEEWIAYILR 120
Query: 627 VRIIDGIAQDQHMNP-------------------KISDFGMARMFGGDELQGNTKRIVGT 667
+ G+A H N K+ DFG++ + NT +GT
Sbjct: 121 -ETLRGLAY-LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNT--FIGT 176
Query: 668 YGYMSPE-----YALEGVFSVKSDVFSFGVLMLE 696
+M+PE + + +SDV+S G+ +E
Sbjct: 177 PYWMAPEVIACDEQPDASYDARSDVWSLGITAIE 210
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 53/274 (19%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQH-RNLVRLLGC 589
+G G FG V K G +AVKR+ S + K ++ ++ + +V+ G
Sbjct: 12 IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGA 71
Query: 590 CIEQGEKILIYEYMVNKSLDVF---LFDPTKKHL----LGW------------QLRVRII 630
+G+ + E M + SLD F +++ K + LG + ++II
Sbjct: 72 LFREGDCWICMELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKII 130
Query: 631 ------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRI--VGTYGYMSPE----YALE 678
I D++ N K+ DFG++ +L + + G YM+PE A +
Sbjct: 131 HRDVKPSNILLDRNGNIKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPERIDPSARD 185
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFN-LLGHAWSLCKNDRAHELMDPVLQN 737
G + V+SDV+S G+ + E+ TG + +N + + K D ++ +
Sbjct: 186 G-YDVRSDVWSLGITLYEV-----ATGKFPYPKWNSVFDQLTQVVKGDPP--ILSNSEER 237
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771
E S V +IN LC+ ++ RP +++
Sbjct: 238 EFSPSF-VNFIN---LCLIKDESKRPKYKELLEH 267
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKEFK-NE 571
L + SV + ++ K+G+G G VY + GQEVA+K++ N Q KE NE
Sbjct: 8 LRTIVSVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQM-NLQQQPKKELIINE 66
Query: 572 MMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL-DVFL---FDPTK---------- 617
++++ + +H N+V L + E ++ EY+ SL DV D +
Sbjct: 67 ILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ 126
Query: 618 --KHLLGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
+ L Q+ R I D I + K++DFG ++ + +T +VGT +M+P
Sbjct: 127 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAP 184
Query: 674 EYALEGVFSVKSDVFSFGVLMLEIL 698
E + K D++S G++ +E++
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMV 209
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 4e-06
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 40/204 (19%)
Query: 527 FSIQSKLGEGGFGPVY---------KGRLLNGQEVAVKRLS-NQSGQGLKEFKNEMMLIA 576
+ +Q +LG+G FG VY + RL +E+ V L+ N++ Q E L++
Sbjct: 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQA----NQEAQLLS 57
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH----------------L 620
KL H +V+ +E+ +I EY + LD + K L
Sbjct: 58 KLDHPAIVKFHASFLERDAFCIITEYCEGRDLD-CKLEELKHTGKTLSENQVCEWFIQLL 116
Query: 621 LG----WQLRVRIIDGIAQDQHMNP---KISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
LG Q R+ D A++ + KI DFG++R+ G T GT YMSP
Sbjct: 117 LGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATT--FTGTPYYMSP 174
Query: 674 EYALEGVFSVKSDVFSFGVLMLEI 697
E + KSD++S G ++ E+
Sbjct: 175 EALKHQGYDSKSDIWSLGCILYEM 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 5e-06
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 642 KISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
KI DFG+AR D ++ + R+ +M+PE + V++ +SDV+SFGVL+ EI S
Sbjct: 214 KICDFGLARDIYKDPDYVRKGSARL--PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 271
Query: 700 --SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQE 757
+ GV + F C+ + M E + P + R + L C Q
Sbjct: 272 LGASPYPGVQINEEF---------CQRLKDGTRMR---APENATPEIYR---IMLACWQG 316
Query: 758 NAEDRPTMSDVVSMINNEL 776
+ ++RPT S +V ++ + L
Sbjct: 317 DPKERPTFSALVEILGDLL 335
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 8e-06
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 549 GQEVAVKRLSNQSGQGLKE---FKNEMMLIAKLQHRNLVRLL--GCCIEQGEKILIYEYM 603
G EVA+K L + + + F+ E L A+L H N+V LL G G ++EY+
Sbjct: 3 GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEA-PPGLLFAVFEYV 61
Query: 604 VNKSL-DVFLFDPTKKHLLGWQLRVRIIDGIA---------------------QDQHMNP 641
++L +V D +L ++++D +A +
Sbjct: 62 PGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHA 121
Query: 642 KISDFGMARMFGG----DELQGN-TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLE 696
K+ DFG+ + G D T ++GT Y +PE + SD++++G++ LE
Sbjct: 122 KVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLE 181
Query: 697 ILSSK 701
L+ +
Sbjct: 182 CLTGQ 186
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 9e-06
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQH---RNLVRLL 587
+G G +G VY+G+ + G+ VA+K ++ + + + + E+ L+++L+ N+ +
Sbjct: 9 IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY 68
Query: 588 GCCIEQGEKILIYEYMVNKSLDVFL-FDPTKKHLLGWQLR-----------VRIID---- 631
G ++ +I EY S+ + P + + +R V +I
Sbjct: 69 GSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIK 128
Query: 632 --GIAQDQHMNPKISDFGMARMFGGDELQGNTKRI--VGTYGYMSPEYALEGV-FSVKSD 686
I N K+ DFG+A + Q ++KR VGT +M+PE EG + K+D
Sbjct: 129 AANILVTNTGNVKLCDFGVAALLN----QNSSKRSTFVGTPYWMAPEVITEGKYYDTKAD 184
Query: 687 VFSFGVLMLEI 697
++S G+ + E+
Sbjct: 185 IWSLGITIYEM 195
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 45/202 (22%), Positives = 94/202 (46%), Gaps = 34/202 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E + I +LG+G FG VYK + G A K + +S + L+++ E+ ++A H +
Sbjct: 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYI 71
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---------------R 628
V+LLG G+ ++ E+ ++D + + + L Q++V +
Sbjct: 72 VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK 130
Query: 629 IID------GIAQDQHMNPKISDFGMARMFGGDELQGNTKR--IVGTYGYMSPEYAL--- 677
II + + K++DFG++ ++ +R +GT +M+PE +
Sbjct: 131 IIHRDLKAGNVLLTLDGDIKLADFGVS----AKNVKTLQRRDSFIGTPYWMAPEVVMCET 186
Query: 678 --EGVFSVKSDVFSFGVLMLEI 697
+ + K+D++S G+ ++E+
Sbjct: 187 MKDTPYDYKADIWSLGITLIEM 208
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 2e-05
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 595 EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGG 654
E +L + Y V K + FL K+ + L R I KI DFG+AR
Sbjct: 214 EDLLSFSYQVAKGMS-FL---ASKNCIHRDLAAR---NILLTHGRITKICDFGLARDIRN 266
Query: 655 DE---LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
D ++GN + V +M+PE V++ +SDV+S+G+L+ EI S
Sbjct: 267 DSNYVVKGNARLPVK---WMAPESIFNCVYTFESDVWSYGILLWEIFS 311
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 2e-05
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E+F + ++G G +G VYK R +N G+ A+K + + G+ + E++++ +H N+
Sbjct: 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNI 68
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSL-DVF-LFDPTKKHLLGWQLRV-------------- 627
V G + + + + E+ SL D++ + P + + + R
Sbjct: 69 VAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKM 128
Query: 628 -RIIDG--IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVF 681
R I G I + + K++DFG++ K +GT +M+PE A +G +
Sbjct: 129 HRDIKGANILLTDNGHVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGY 186
Query: 682 SVKSDVFSFGVLMLEI 697
+ D+++ G+ +E+
Sbjct: 187 NQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 24/145 (16%)
Query: 532 KLGEGGFGPVYKGRLLNGQE-VAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHRNLVRLLG 588
K+GEG +G V+K + E VA+KR+ + +G+ E+ L+ +L+H+N+VRL
Sbjct: 7 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66
Query: 589 CCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQL----------RVRIIDG 632
+ L++EY ++ L + DP +QL V D
Sbjct: 67 VLHSDKKLTLVFEY-CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDL 125
Query: 633 IAQDQHMNP----KISDFGMARMFG 653
Q+ +N K++DFG+AR FG
Sbjct: 126 KPQNLLINKNGELKLADFGLARAFG 150
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 3e-05
Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRNLV 584
F++ +G+G FG VYK Q VA+K + ++ +++ + E+ +++ + +
Sbjct: 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62
Query: 585 RLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG---------IA 634
+ G ++ + +I EY S LD+ + + + LR ++ G I
Sbjct: 63 KYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILR-EVLLGLEYLHEEGKIH 121
Query: 635 QD---------QHMNPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYALEGVFS 682
+D + + K++DFG++ +L + VGT +M+PE + +
Sbjct: 122 RDIKAANILLSEEGDVKLADFGVS-----GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYD 176
Query: 683 VKSDVFSFGVLMLEIL 698
K+D++S G+ +E+
Sbjct: 177 EKADIWSLGITAIELA 192
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 3e-05
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 25/196 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
++ + ++G G +G VYK R L G+ AVK + + G + E+ ++ + +H N+
Sbjct: 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNI 68
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSL-DVF-LFDPTKKHLLGWQLRV-------------- 627
V G + + + + EY SL D++ + P + + + R
Sbjct: 69 VAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKM 128
Query: 628 -RIIDG--IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVF 681
R I G I + + K++DFG+A K +GT +M+PE A G +
Sbjct: 129 HRDIKGANILLTDNGDVKLADFGVAAKITAT--IAKRKSFIGTPYWMAPEVAAVEKNGGY 186
Query: 682 SVKSDVFSFGVLMLEI 697
+ D+++ G+ +E+
Sbjct: 187 NQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 533 LGEGGFGPVYKG--------RLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
LG+G F ++KG L+ EV +K L + F ++++L H++LV
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV 627
G C+ E I++ EY+ SLD +L + W+L V
Sbjct: 63 LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEV 105
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 8e-05
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 37/205 (18%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVR 585
F + +G G +G VYKGR + ++A ++ + +G +E K E+ ++ K HRN+
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67
Query: 586 LLGCCIEQG------EKILIYEYMVNKSLDVFLFDPTK--------------------KH 619
G I++ + L+ E+ S+ L TK H
Sbjct: 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLSH 126
Query: 620 LLGWQLRVRIIDG--IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
L ++ R I G + ++ K+ DFG++ D G +GT +M+PE
Sbjct: 127 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIA 184
Query: 678 -----EGVFSVKSDVFSFGVLMLEI 697
+ + KSD++S G+ +E+
Sbjct: 185 CDENPDATYDFKSDLWSLGITAIEM 209
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 8e-05
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 40/195 (20%)
Query: 532 KLGEGGFGPVYKGRLL-NGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGC 589
++G G G VYK G+ A+K + N ++ E+ ++ + H N+V+
Sbjct: 81 RIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDM 140
Query: 590 CIEQGEKILIYEYMVNKSLD-------VFLFDPTKKHLLG--WQLRVRII------DGIA 634
GE ++ E+M SL+ FL D ++ L G + R I+ +
Sbjct: 141 FDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLL 200
Query: 635 QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE-------------YALEGVF 681
+ N KI+DFG++R+ N+ VGT YMSPE YA
Sbjct: 201 INSAKNVKIADFGVSRILAQTMDPCNSS--VGTIAYMSPERINTDLNHGAYDGYA----- 253
Query: 682 SVKSDVFSFGVLMLE 696
D++S GV +LE
Sbjct: 254 ---GDIWSLGVSILE 265
|
Length = 353 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 31/197 (15%)
Query: 533 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMM---LIAKLQHRNLVRL-- 586
LG+GGFG V ++ G+ A K+L+ + + K ++ M+ ++AK+ R +V L
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60
Query: 587 ---------LGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQL--RVRII 630
L I G + + Y V++ F +P T + + G + + RII
Sbjct: 61 AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFP-EPRACFYTAQIISGLEHLHQRRII 119
Query: 631 ------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ + D N +ISD G+A + Q TK GT G+M+PE +
Sbjct: 120 YRDLKPENVLLDNDGNVRISDLGLAVEL--KDGQSKTKGYAGTPGFMAPELLQGEEYDFS 177
Query: 685 SDVFSFGVLMLEILSSK 701
D F+ GV + E+++++
Sbjct: 178 VDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFG 691
I D+H + +ISD G+A F + + VGT+GYM+PE +GV + +D FS G
Sbjct: 128 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 183
Query: 692 VLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
++ ++L + T + + DR M L + S +
Sbjct: 184 CMLFKLLRGHSPFRQHKTKDKHEI---------DRMTLTMAVELPDSFSPELR 227
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 630 IDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDV 687
+D + D + KI+DFGM + +FGG T+ GT Y++PE + D
Sbjct: 129 LDNVMLDAEGHIKIADFGMCKENIFGGK----TTRTFCGTPDYIAPEIIAYQPYGKSVDW 184
Query: 688 FSFGVLMLEILS 699
++FGVL+ E+L+
Sbjct: 185 WAFGVLLYEMLA 196
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 531 SKLGEGGFGPVY------KGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
K+GEG FG G+ +E+ + ++S + + E + E+ +++ ++H N+V
Sbjct: 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKERE---ESRKEVAVLSNMKHPNIV 62
Query: 585 RLLGCCIEQGEKILIYEY--------MVNKSLDVFLFDPTKKHLLGWQLRV--------- 627
+ E G ++ +Y +N V LF + +L W +++
Sbjct: 63 QYQESFEENGNLYIVMDYCEGGDLYKKINAQRGV-LF--PEDQILDWFVQICLALKHVHD 119
Query: 628 RII-------DGIAQDQHMNPKISDFGMARMFGGD-ELQGNTKRIVGTYGYMSPEYALEG 679
R I I + K+ DFG+AR+ EL + +GT Y+SPE
Sbjct: 120 RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL---ARTCIGTPYYLSPEICENR 176
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
++ KSD+++ G ++ E+ + K
Sbjct: 177 PYNNKSDIWALGCVLYEMCTLK 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 2e-04
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 642 KISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
KI DFG+AR D ++ R+ +M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 219 KICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 276
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 533 LGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLK-----EFKNEMMLIAKLQHRNL 583
LG+G FG V+ R + GQ A+K L + LK K E ++A++ H +
Sbjct: 4 LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKAT---LKVRDRVRTKMERDILAEVNHPFI 60
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLGWQ 624
V+L +G+ LI +++ L +V + K H LG
Sbjct: 61 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 120
Query: 625 LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
R + I D+ + K++DFG+++ E + GT YM+PE +
Sbjct: 121 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVVNRRGHTQS 178
Query: 685 SDVFSFGVLMLEILS 699
+D +SFGVLM E+L+
Sbjct: 179 ADWWSFGVLMFEMLT 193
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 42/206 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E + I +LG+G FG VYK + G A K + +S + L+++ E+ ++A H N+
Sbjct: 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 64
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---------------R 628
V+LL + ++ E+ ++D + + ++ L Q+RV +
Sbjct: 65 VKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK 123
Query: 629 IID------GIAQDQHMNPKISDFGMARMFGGDELQGNTKRI------VGTYGYMSPEYA 676
II I + K++DFG++ NT+ I +GT +M+PE
Sbjct: 124 IIHRDLKAGNILFTLDGDIKLADFGVS--------AKNTRTIQRRDSFIGTPYWMAPEVV 175
Query: 677 L-----EGVFSVKSDVFSFGVLMLEI 697
+ + + K+DV+S G+ ++E+
Sbjct: 176 MCETSKDRPYDYKADVWSLGITLIEM 201
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 21/186 (11%)
Query: 532 KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V R +G++VAVK + + Q + NE++++ QH+N+V +
Sbjct: 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87
Query: 591 IEQGEKILIYEYMVNKSL------------------DVFLFDPTKKHLLGWQLRVRIIDG 632
+ E ++ E++ +L + L H G R D
Sbjct: 88 LVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDS 147
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG D + K +VGT +M+PE + + D++S G+
Sbjct: 148 ILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGI 205
Query: 693 LMLEIL 698
+++E++
Sbjct: 206 MVIEMV 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 3e-04
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRN 582
++F S+LG G G V K + + ++L + + + E+ ++ +
Sbjct: 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 64
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + + +LG ++ + ++ G+A +++H
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-KVSIAVLRGLAYLREKH 123
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
+ P K+ DFG++ G + VGT YMSPE L+G
Sbjct: 124 QIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE-RLQGTH 178
Query: 681 FSVKSDVFSFGVLMLEI 697
+SV+SD++S G+ ++E+
Sbjct: 179 YSVQSDIWSMGLSLVEL 195
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 55/213 (25%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 517 FASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSN--QSGQGLKEFKNEMM 573
F +V T + +G G FG V R L GQ VA+K++ + K E+
Sbjct: 2 FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELK 61
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-PTKKHLLGWQLRVRIIDG 632
L+ L+H N++ L I E I ++ L L P +K + + L +I+ G
Sbjct: 62 LLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQFIQYFL-YQILRG 120
Query: 633 ------------------IAQDQHMNPKISDFGMAR-----MFGGDELQGNTKRIVGTYG 669
I +++ + KI DFG+AR M G V T
Sbjct: 121 LKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTG----------YVSTRY 170
Query: 670 YMSPEYALE-GVFSVKSDVFSFGVLMLEILSSK 701
Y +PE L + V+ D++S G + E+L K
Sbjct: 171 YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 630 IDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDV 687
+D + D + KI+DFGM + + GG T GT Y++PE + D
Sbjct: 124 LDNVLLDSEGHIKIADFGMCKEGILGGV----TTSTFCGTPDYIAPEILSYQPYGPAVDW 179
Query: 688 FSFGVLMLEIL 698
++ GVL+ E+L
Sbjct: 180 WALGVLLYEML 190
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 34/197 (17%)
Query: 533 LGEGGFGPV------YKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+GGFG V G++ +++ KR+ + G+ + NE ++ K+ R +V L
Sbjct: 8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMA--LNEKQILEKVNSRFVVSL 65
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFL-------FDPTKKHLLGWQL--------RVRII- 630
+ L+ M L + F+ + ++ + RI+
Sbjct: 66 AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVY 125
Query: 631 -----DGIAQDQHMNPKISDFGMA-RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ I D H + +ISD G+A + G ++G VGT GYM+PE ++
Sbjct: 126 RDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVKNERYTFS 181
Query: 685 SDVFSFGVLMLEILSSK 701
D ++ G L+ E+++ +
Sbjct: 182 PDWWALGCLLYEMIAGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 533 LGEGGFGPVYKGRLLN---------GQEVAVKR-LSNQSGQGLKEFKNEMMLIAKLQHRN 582
LG+G F +YKG L GQEV+V + + F L+++L H++
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL 612
LV+L G C+ E I++ EY+ LDVFL
Sbjct: 63 LVKLYGVCVRD-ENIMVEEYVKFGPLDVFL 91
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 3e-04
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 29/201 (14%)
Query: 522 AATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKEFK--NEMMLIAKL 578
AAT +++ KLGEG + VYKG +NGQ VA+K +S ++ +G+ F E L+ L
Sbjct: 3 AATSYLNLE-KLGEGSYATVYKGISRINGQLVALKVISMKTEEGVP-FTAIREASLLKGL 60
Query: 579 QHRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKH-----LLGWQL------- 625
+H N+V LL I E + ++EYM + P H L +QL
Sbjct: 61 KHANIV-LLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYI 119
Query: 626 -RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
I+ + Q++ K++DFG+AR Q + +V T Y P+ L
Sbjct: 120 HGQHILHRDLKPQNLLISYLGELKLADFGLARA-KSIPSQTYSSEVV-TLWYRPPDVLLG 177
Query: 679 GV-FSVKSDVFSFGVLMLEIL 698
+S D++ G + +E+L
Sbjct: 178 ATDYSSALDIWGAGCIFIEML 198
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 36/206 (17%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFK-NEMMLIAKLQHRNLVRLLGCC 590
K+G G +G VYK + +G++ L G G+ E+ L+ +L+H N++ L
Sbjct: 8 KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVF 67
Query: 591 IEQGEK--ILIYEYMVNKSLDVFLFDPTKK---------HLLGWQLRVRIIDGI------ 633
+ ++ L+++Y + + F K + L +I+DGI
Sbjct: 68 LSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN 127
Query: 634 -AQDQHMNP---------------KISDFGMARMFGGD-ELQGNTKRIVGTYGYMSPEYA 676
+ + P KI+D G AR+F + + +V T+ Y +PE
Sbjct: 128 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 187
Query: 677 LEGVFSVKS-DVFSFGVLMLEILSSK 701
L K+ D+++ G + E+L+S+
Sbjct: 188 LGARHYTKAIDIWAIGCIFAELLTSE 213
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 4e-04
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFK-NEMMLIAKLQHRNLVRLLGCC 590
K+G G +G VYK + +G++ L G G+ E+ L+ +L+H N++ L
Sbjct: 8 KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 67
Query: 591 IEQGEK--ILIYEYMVNKSLDVFLFDPTKK---------HLLGWQLRVRIIDGI------ 633
+ ++ L+++Y + + F K + L +I+DGI
Sbjct: 68 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 127
Query: 634 -AQDQHMNP---------------KISDFGMARMFGGD-ELQGNTKRIVGTYGYMSPEYA 676
+ + P KI+D G AR+F + + +V T+ Y +PE
Sbjct: 128 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 187
Query: 677 LEGVFSVKS-DVFSFGVLMLEILSSK----------KNTGVYNTDS----FNLLGHA--- 718
L K+ D+++ G + E+L+S+ K + Y+ D FN++G
Sbjct: 188 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK 247
Query: 719 -WSLCKNDRAHE-LMDPVLQNEVSLPMLVRYI 748
W K H LM +N + L++Y+
Sbjct: 248 DWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYM 279
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 4e-04
Identities = 69/302 (22%), Positives = 109/302 (36%), Gaps = 64/302 (21%)
Query: 533 LGEGGFGPVYKGRLL-NGQEVAVKRLSN----QSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
LG+G FG V RL +G+ AVK L Q + +L H L +L
Sbjct: 3 LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY 62
Query: 588 GCCIEQGEKILIYEYMVNKSLDVF------LFDPTKK--------------HLLGWQLRV 627
CC + +++ VN +F FD + H G R
Sbjct: 63 -CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRD 121
Query: 628 RIIDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKS 685
+D + D + K++DFGM + +F G T GT Y++PE E ++
Sbjct: 122 LKLDNVLLDHEGHCKLADFGMCKEGIFNGK----TTSTFCGTPDYIAPEILQEMLYGPSV 177
Query: 686 DVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745
D ++ GVL+ E+L GHA +N+ +L + +L +EV P +
Sbjct: 178 DWWAMGVLLYEMLC----------------GHAPFEAENE--DDLFEAILNDEVVYPTWL 219
Query: 746 RYINVALL-------------CVQENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTK 792
V +L + E+ ++ E N EPPF K
Sbjct: 220 SQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLN-RRQIEPPFRPRIK 278
Query: 793 GK 794
+
Sbjct: 279 SR 280
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 63/301 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHR 581
E + +GEG +G V K + GQ VA+K+ S K E+ ++ +L+H
Sbjct: 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-------TKKHLLGWQLRVRIID--- 631
NLV L+ + L++E++ + LD P +K+L +Q+ +R I+
Sbjct: 61 NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYL--FQI-LRGIEFCH 117
Query: 632 ------------GIAQDQHMNPKISDFGMARMF-GGDELQGNTKRIVGTYGYMSPEYALE 678
I Q K+ DFG AR E+ + V T Y +PE +
Sbjct: 118 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD---YVATRWYRAPELLVG 174
Query: 679 GVFSVKS-DVFSFGVLMLEILSSKKNTG--VYNTDS-FNLLGHAWSLCKN--DRAHELMD 732
++ D+++ G L+ E+L TG ++ DS + L H N R E+
Sbjct: 175 DTKYGRAVDIWAVGCLVTEML-----TGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ 229
Query: 733 --PVLQNEVSLP-------MLVRY-------INVALLCVQENAEDRPTMSDVVSMINNEL 776
P+ + LP + R+ +++A C++ + +DRP+ S ++++E
Sbjct: 230 KNPLFAG-MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQ---LLHHEF 285
Query: 777 F 777
F
Sbjct: 286 F 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 5e-04
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFG 691
I D+H + +ISD G+A F + + VGT+GYM+PE +G + +D FS G
Sbjct: 128 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGTAYDSSADWFSLG 183
Query: 692 VLMLEIL 698
++ ++L
Sbjct: 184 CMLFKLL 190
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 5e-04
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
K+ DFG ++M+ + GT Y++PE +S K+D+FS GVL+ E+L+ K
Sbjct: 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242
Query: 702 K 702
+
Sbjct: 243 R 243
|
Length = 496 |
| >gnl|CDD|221289 pfam11883, DUF3403, Domain of unknown function (DUF3403) | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 6e-04
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 779 LPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVSLIYPR 823
+P PK+P F SS+ST E +VN VTVS+I R
Sbjct: 6 IPQPKQPGFCVGRSPYET-DSSSSTQR-DESWTVNQVTVSVIDAR 48
|
This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 50 amino acids in length. This domain is found associated with pfam00069, pfam08276, pfam00954, pfam01453. Length = 48 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 6e-04
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 630 IDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDV 687
+D + D+ + KI+DFGM + M G +G GT Y++PE ++ D
Sbjct: 124 LDNVLLDKDGHIKIADFGMCKENMNG----EGKASTFCGTPDYIAPEILKGQKYNESVDW 179
Query: 688 FSFGVLMLEIL 698
+SFGVL+ E+L
Sbjct: 180 WSFGVLLYEML 190
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 7e-04
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 25/194 (12%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSG-QGLKEFK-NEMMLIAKLQHRNL 583
F + +GEG +G V K R +E VA+K+ + + +KE E+ ++ L+ N+
Sbjct: 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENI 62
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPT-----KKHLLGWQLRVRIIDGIAQDQ- 637
V L +G+ L++EY+ L++ P K +QL ++ I ++
Sbjct: 63 VELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQL-IKAIHWCHKNDI 121
Query: 638 ---HMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
+ P K+ DFG AR + N V T Y SPE L +
Sbjct: 122 VHRDIKPENLLISHNDVLKLCDFGFARNL-SEGSNANYTEYVATRWYRSPELLLGAPYGK 180
Query: 684 KSDVFSFGVLMLEI 697
D++S G ++ E+
Sbjct: 181 AVDMWSVGCILGEL 194
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 8e-04
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 641 PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
K+ DFG A+ + T GT Y++PE L + D +S G+L+ E+L
Sbjct: 132 VKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL 186
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.001
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 527 FSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRNL 583
+ S +G G +G V G++VA+K+LS QS K E+ L+ + H N+
Sbjct: 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENV 76
Query: 584 VRLLGCCIEQGEKILIYE-YMVNKSLDVFLFDPTKKHLLG--------WQ-LR------- 626
+ LL + Y+V + L + K L +Q LR
Sbjct: 77 IGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHS 136
Query: 627 VRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
II IA ++ KI DFG+AR DE+ G V T Y +PE L +
Sbjct: 137 AGIIHRDLKPSNIAVNEDCELKILDFGLARH-TDDEMTG----YVATRWYRAPEIMLNWM 191
Query: 681 FSVKS-DVFSFGVLMLEILSSK 701
++ D++S G +M E+L+ K
Sbjct: 192 HYNQTVDIWSVGCIMAELLTGK 213
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 630 IDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDV 687
+D I D + KI+DFGM + M G T GT Y++PE L ++ D
Sbjct: 124 LDNILLDTDGHIKIADFGMCKENMLG----DAKTCTFCGTPDYIAPEILLGQKYNTSVDW 179
Query: 688 FSFGVLMLEIL 698
+SFGVL+ E+L
Sbjct: 180 WSFGVLLYEML 190
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
E + KLGEG + VYKGR L VA+K RL ++ G + E+ L+ L+H
Sbjct: 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHA 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD 614
N+V L + L++EY+ +K L +L D
Sbjct: 65 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDD 96
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 532 KLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V + +G+ VAVK++ + Q + NE++++ QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 591 IEQGEKILIYEYMVNKSL-DVFLFDPTKK-----------------HLLGWQLRVRIIDG 632
+ E ++ E++ +L D+ + H G R D
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDS 146
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG E+ K +VGT +M+PE + + D++S G+
Sbjct: 147 ILLTHDGRVKLSDFGFCAQVS-KEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 693 LMLEILSSK 701
+++E++ +
Sbjct: 205 MVIEMVDGE 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 54/284 (19%)
Query: 526 NFSIQSKLGEGGFGPVYK-------GRLLNGQEVAVKRLS-----NQSGQGLKEFKNEMM 573
+++ LG G FG VYK LL +E+ V + + + + + +E+
Sbjct: 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVT 60
Query: 574 LIAK-LQHRNLVRLLGCCIEQGEKILIYEYMVNKSL-DVFLFDPTKKHLLG----WQLRV 627
+I + L+H N+VR +E ++ + + L + F KK W + V
Sbjct: 61 IIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120
Query: 628 RII-------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668
+++ + I + I+DFG+A+ + +VGT
Sbjct: 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTI 177
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728
Y PE + K+DV++FG ++ ++ Y+T N+L A +
Sbjct: 178 LYSCPEIVKNEPYGEKADVWAFGCILYQM--CTLQPPFYST---NMLSLATKI-----VE 227
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ +P+ E V V C+ +AE RP + V +MI
Sbjct: 228 AVYEPL--PEGMYSEDVTD--VITSCLTPDAEARPDIIQVSAMI 267
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 37/199 (18%)
Query: 531 SKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
SK+GEG +G V+K R GQ VA+K+ S K E+ ++ +L+H NLV L+
Sbjct: 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLI 66
Query: 588 GCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGW--QLRVRIIDGIAQ-----DQH-- 638
+ + L++EY D + + +K+ G L +II Q +H
Sbjct: 67 EVFRRKRKLHLVFEY-----CDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC 121
Query: 639 ----MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG--VF 681
+ P K+ DFG AR+ G + V T Y +PE L G +
Sbjct: 122 IHRDVKPENILITKQGQIKLCDFGFARILTGPG--DDYTDYVATRWYRAPEL-LVGDTQY 178
Query: 682 SVKSDVFSFGVLMLEILSS 700
DV++ G + E+L+
Sbjct: 179 GPPVDVWAIGCVFAELLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 57/212 (26%)
Query: 530 QSKLGEGGFGPVYKGR-LLNGQEVAVKR-LSNQSGQG-----LKEFKNEMMLIAKLQHRN 582
+K+G+G FG V+K R Q VA+K+ L +G L+E K ++ L+H N
Sbjct: 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIK----ILQLLKHEN 72
Query: 583 LVRLLGCCIEQGEK--------ILIYEY--------MVNKSLDVFLFDPTK--KHLLG-- 622
+V L+ C + L++E+ + NK++ L + K K LL
Sbjct: 73 VVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGL 132
Query: 623 -WQLRVRII-------------DGIAQDQHMNPKISDFGMARMFG---GDELQGNTKRIV 665
+ R +I+ DGI K++DFG+AR F + T R+V
Sbjct: 133 YYIHRNKILHRDMKAANILITKDGIL-------KLADFGLARAFSLSKNSKPNRYTNRVV 185
Query: 666 GTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLE 696
T Y PE L E + D++ G +M E
Sbjct: 186 -TLWYRPPELLLGERDYGPPIDMWGAGCIMAE 216
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 63/219 (28%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS-NQSGQGLK-EFKNEMMLIAKLQHRN 582
F +++GEG +G VY+ R +G+ VA+K++ + G+ E+ L+ L+H N
Sbjct: 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLD-VFLFDPTKKHLLGWQLRVRIIDG------IAQ 635
+V L E +V K LD +FL + L ++D +Q
Sbjct: 68 IVELK-------------EVVVGKHLDSIFLVMEYCEQDLA-----SLLDNMPTPFSESQ 109
Query: 636 DQ-------------------HMNPKIS-------------DFGMARMFGGDELQGNTKR 663
+ H + K+S DFG+AR + G + T +
Sbjct: 110 VKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTY-GLPAKPMTPK 168
Query: 664 IVGTYGYMSPEYALEGVFSVKS-DVFSFGVLMLEILSSK 701
+V T Y +PE L + D+++ G ++ E+L+ K
Sbjct: 169 VV-TLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.002
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 34/194 (17%)
Query: 533 LGEGGFGPV------YKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+GGFG V G++ +++ KR+ + G+ + NE ++ K+ R +V L
Sbjct: 8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKRILEKVNSRFVVSL 65
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFL-------FDPTKKHLLGWQL--------RVRII- 630
+ L+ M L + FD + +L R RI+
Sbjct: 66 AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVY 125
Query: 631 -----DGIAQDQHMNPKISDFGMA-RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ I D + +ISD G+A ++ G+ ++G VGT GYM+PE ++
Sbjct: 126 RDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR----VGTVGYMAPEVINNEKYTFS 181
Query: 685 SDVFSFGVLMLEIL 698
D + G L+ E++
Sbjct: 182 PDWWGLGCLIYEMI 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK-SDVFSFGVLM 694
DQ + K++DFG++R G E K+ VGT Y++PE + GV K SD +S G ++
Sbjct: 131 DQTGHLKLTDFGLSRN--GLE----NKKFVGTPDYLAPE-TILGVGDDKMSDWWSLGCVI 183
Query: 695 LEIL 698
E L
Sbjct: 184 FEFL 187
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Query: 533 LGEGGFGPV------YKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+GGFG V G++ +++ KR+ + G+ + NE ++ K+ R +V L
Sbjct: 8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKQILEKVNSRFVVSL 65
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFL-------FDPTKKHLLGWQL--------RVRII- 630
+ L+ M L + FD + ++ R RI+
Sbjct: 66 AYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVY 125
Query: 631 -----DGIAQDQHMNPKISDFGMA-RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ I D + + +ISD G+A + G+ ++G VGT GYM+PE ++
Sbjct: 126 RDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGR----VGTVGYMAPEVVKNERYTFS 181
Query: 685 SDVFSFGVLMLEILSSK 701
D + G L+ E++ K
Sbjct: 182 PDWWGLGCLIYEMIEGK 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 30/197 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 64
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 123
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
+ P K+ DFG++ G + VGT YMSPE L+G
Sbjct: 124 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE-RLQGTH 178
Query: 681 FSVKSDVFSFGVLMLEI 697
+SV+SD++S G+ ++E+
Sbjct: 179 YSVQSDIWSMGLSLVEM 195
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 531 SKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
S +G G +G V G VAVK+LS QS K E+ L+ ++H N++ LL
Sbjct: 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 82
Query: 588 -----GCCIEQGEKILIYEYMVNKSLDVF-----LFDPTKKHLLGWQLR-------VRII 630
+E+ + + +++ L+ L D + L+ LR II
Sbjct: 83 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 142
Query: 631 ------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSV 683
+A ++ KI DFG+AR DE+ G V T Y +PE L + ++
Sbjct: 143 HRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYRAPEIMLNWMHYNQ 197
Query: 684 KSDVFSFGVLMLEILSSK 701
D++S G +M E+L+ +
Sbjct: 198 TVDIWSVGCIMAELLTGR 215
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 37/205 (18%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVR 585
F + +G G +G VYKGR + ++A ++ + + +E K E+ ++ K HRN+
Sbjct: 18 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIAT 77
Query: 586 LLGCCIEQG------EKILIYEYMVNKSLDVFLFDPTK--------------------KH 619
G I++ + L+ E+ S+ L TK H
Sbjct: 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSV-TDLVKNTKGNALKEDWIAYICREILRGLAH 136
Query: 620 LLGWQLRVRIIDG--IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
L ++ R I G + ++ K+ DFG++ D G +GT +M+PE
Sbjct: 137 LHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIA 194
Query: 678 -----EGVFSVKSDVFSFGVLMLEI 697
+ + +SD++S G+ +E+
Sbjct: 195 CDENPDATYDYRSDIWSLGITAIEM 219
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 532 KLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
KLGEG + VYKGR L GQ VA+K RL ++ G + E L+ L+H N+V L
Sbjct: 12 KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIR-EASLLKDLKHANIVTLHD 70
Query: 589 CCIEQGEKILIYEYM 603
+ L++EY+
Sbjct: 71 IIHTKKTLTLVFEYL 85
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 0.003
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 34/194 (17%)
Query: 532 KLGEGGFGPVYKGRL-LNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
KLGEG + VYKG+ +NG+ VA+K RL + G + E L+ L+H N+V LL
Sbjct: 12 KLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIR-EASLLKGLKHANIV-LLH 69
Query: 589 CCIEQGEKI-LIYEYMVNKSLDVFL------FDPTKKHLLGWQLRVRIIDGIAQ----DQ 637
I E + L++EY V+ L ++ P L +QL +R + I Q +
Sbjct: 70 DIIHTKETLTLVFEY-VHTDLCQYMDKHPGGLHPENVKLFLFQL-LRGLSYIHQRYILHR 127
Query: 638 HMNP-----------KISDFGMARMFGGDELQGNT-KRIVGTYGYMSPEYALEGV-FSVK 684
+ P K++DFG+AR + +T V T Y P+ L +S
Sbjct: 128 DLKPQNLLISDTGELKLADFGLAR---AKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTC 184
Query: 685 SDVFSFGVLMLEIL 698
D++ G + +E++
Sbjct: 185 LDMWGVGCIFVEMI 198
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 532 KLGEGGFGPVYKGRL---LNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
++G G FG V G + +V VK L + S Q +F E LQH NL++ L
Sbjct: 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61
Query: 588 GCCIEQGEKILIYEY 602
G C E +L+ E+
Sbjct: 62 GQCTEVTPYLLVMEF 76
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V + G++VAVK++ + Q + NE++++ QH N+V +
Sbjct: 26 KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY 85
Query: 591 IEQGEKILIYEYMVNKSL-DVF----LFDPTKKHLLGWQLRV-----------RII--DG 632
+ E ++ E++ +L D+ + + + L+ R I D
Sbjct: 86 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDS 145
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG + + K +VGT +M+PE + + D++S G+
Sbjct: 146 ILLTSDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 203
Query: 693 LMLEIL 698
+++E++
Sbjct: 204 MVIEMV 209
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 57/251 (22%), Positives = 93/251 (37%), Gaps = 52/251 (20%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLKEFK---NEMMLIAKLQHRN 582
F I +++G+GG+G V+ + + E VA+KR+ L E + E ++ +
Sbjct: 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEW 62
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL------------FDPTKK-------HLLGW 623
LV+LL + L EY+ L F + H LG+
Sbjct: 63 LVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGY 122
Query: 624 QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
R + D + K++DFG+++ G +VG+ YM+PE +
Sbjct: 123 IHRDLKPENFLIDASGHIKLTDFGLSK--GIVTY---ANSVVGSPDYMAPEVLRGKGYDF 177
Query: 684 KSDVFSFGVLMLEIL--------SSKKNT-------------GVYNTDSFNLLGHAWSL- 721
D +S G ++ E L S+ T VY+ FNL AW L
Sbjct: 178 TVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLI 237
Query: 722 --CKNDRAHEL 730
ND +
Sbjct: 238 TKLINDPSRRF 248
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 823 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.98 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.97 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.97 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.97 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.97 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.97 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.97 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.97 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.97 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.97 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.97 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.97 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.96 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.96 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.96 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.96 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.96 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.96 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.96 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.96 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.96 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.96 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.96 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.96 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.96 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.96 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.96 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.96 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.96 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.96 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.96 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.96 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.96 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.96 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.96 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.96 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.96 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.96 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.96 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.96 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.96 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.96 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.96 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.96 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.96 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.96 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.95 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.95 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.95 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.95 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.95 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.95 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.95 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.95 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.95 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.95 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.95 | |
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 99.95 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.95 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.95 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.95 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.95 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.95 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.95 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.95 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.95 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.95 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.95 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.95 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.95 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.95 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.95 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.95 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.95 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.95 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.95 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.95 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.95 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.95 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.95 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.95 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.95 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.95 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.95 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.95 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.95 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.95 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.95 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.95 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.95 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.95 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.95 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.95 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.94 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.94 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.94 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.94 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.94 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.94 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.94 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.94 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.94 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.94 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.94 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.94 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.94 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.94 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.94 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.94 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.94 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.94 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.94 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.94 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.94 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.94 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.94 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.94 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.94 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.94 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.94 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.94 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.94 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.94 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.94 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.94 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.94 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.94 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.94 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.94 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.94 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.94 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.94 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.94 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.94 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.94 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.94 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.94 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.94 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.94 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.93 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.93 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 99.93 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.93 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.93 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.93 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.93 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.93 | |
| PF00954 | 110 | S_locus_glycop: S-locus glycoprotein family; Inter | 99.93 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.93 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.93 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.93 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.93 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.93 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.93 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.93 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.93 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.93 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.93 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.93 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.93 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.92 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.92 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.92 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.92 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.92 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.92 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.92 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.92 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.92 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.92 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.92 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.92 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.92 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.92 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.92 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.92 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.92 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.92 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.92 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.92 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.92 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.92 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.92 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.92 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.92 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.92 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.92 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.92 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.92 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.92 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.92 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.92 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.92 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.92 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 99.91 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.91 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.91 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.91 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.91 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.91 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.91 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.91 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.91 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.91 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.91 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.91 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.91 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.9 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.9 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.9 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.9 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.89 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.89 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.89 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.87 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.87 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.87 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.87 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.86 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.86 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.86 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.86 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.85 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.85 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.84 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.84 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.83 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.82 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.82 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.82 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.81 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.8 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.8 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.79 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.79 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.77 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.73 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.71 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.71 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.67 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.65 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.65 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.64 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.64 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.59 | |
| PF08276 | 66 | PAN_2: PAN-like domain; InterPro: IPR013227 PAN do | 99.58 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.56 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.5 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.39 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.39 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.38 | |
| cd00129 | 80 | PAN_APPLE PAN/APPLE-like domain; present in N-term | 99.3 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.3 | |
| cd01098 | 84 | PAN_AP_plant Plant PAN/APPLE-like domain; present | 99.27 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.21 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.11 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.08 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.05 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.05 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.05 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.04 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 98.98 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 98.9 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.9 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 98.89 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 98.84 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.84 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 98.84 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 98.82 | |
| smart00090 | 237 | RIO RIO-like kinase. | 98.7 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 98.7 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 98.67 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.56 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 98.43 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 98.38 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 98.35 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 98.29 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 98.2 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 98.19 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.17 | |
| smart00473 | 78 | PAN_AP divergent subfamily of APPLE domains. Apple | 98.16 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.12 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 97.85 | |
| PF11883 | 48 | DUF3403: Domain of unknown function (DUF3403); Int | 97.69 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 97.52 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 97.46 | |
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 97.44 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 97.35 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 96.95 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 96.79 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 96.64 | |
| cd01100 | 73 | APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d | 96.56 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 95.8 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 95.8 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 95.53 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 95.3 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 94.49 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 93.87 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 93.07 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 92.55 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 92.16 | |
| KOG1093 | 725 | consensus Predicted protein kinase (contains TBC a | 91.92 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 90.84 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 90.19 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 89.03 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 88.88 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 88.48 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 87.36 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 87.33 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 87.3 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 86.57 | |
| PF00024 | 79 | PAN_1: PAN domain This Prosite entry concerns appl | 86.41 | |
| smart00223 | 79 | APPLE APPLE domain. Four-fold repeat in plasma kal | 84.87 | |
| KOG1826 | 2724 | consensus Ras GTPase activating protein RasGAP/neu | 84.86 | |
| PF07645 | 42 | EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 | 84.33 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 83.1 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 81.31 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 80.64 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=412.67 Aligned_cols=262 Identities=41% Similarity=0.716 Sum_probs=229.5
Q ss_pred CCCcccHHHHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEE
Q 003402 511 SLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590 (823)
Q Consensus 511 ~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~ 590 (823)
....|++.++..+|++|+..+.||+|+||.||+|.+.+++.||||++.....+..++|.+|+.++++++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56679999999999999999999999999999999999999999999765433156799999999999999999999999
Q ss_pred EeCC-eEEEEEEcccCCCchhhccCCCcccccCHHHHHHHHhcccc-------------------------ccCCCceec
Q 003402 591 IEQG-EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------------------------DQHMNPKIS 644 (823)
Q Consensus 591 ~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia~-------------------------d~~~~~KI~ 644 (823)
.+.+ +++||||||+||+|.++|+..... .++|..|++||.++|+ |+++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 9999 599999999999999999986554 7899999999988775 889999999
Q ss_pred eeeceeecCCCccccccccc-cccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CCccchhHHHHhhc
Q 003402 645 DFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYN-TDSFNLLGHAWSLC 722 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~-~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~-~~~~~l~~~~~~~~ 722 (823)
|||||+......... ... .||.+|+|||++..+..+.|+|||||||+|+||+||+++.+... .....+..|++..+
T Consensus 220 DFGLa~~~~~~~~~~--~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSV--STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred CccCcccCCccccce--eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999997654311111 112 89999999999999999999999999999999999999877544 33556899999999
Q ss_pred cCCccccccCcccc-cCCCH-HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 723 KNDRAHELMDPVLQ-NEVSL-PMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 723 ~~~~~~~l~d~~l~-~~~~~-~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..++..+++|+.+. +.... .++.++..++++|++.+|++||+|.||+++|+..
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 99999999999987 55554 6899999999999999999999999999999654
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=373.67 Aligned_cols=238 Identities=29% Similarity=0.435 Sum_probs=190.8
Q ss_pred HhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
.+.+.+..++||+|+||+||+|+..+ .+.||||.|++.... ..++|++|+++++.++|||||+|+|+|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 44566777999999999999998643 467999999876544 77899999999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCc-----------ccccCHHHHHHHHhcccc----------------------ccCCCce
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK-----------KHLLGWQLRVRIIDGIAQ----------------------DQHMNPK 642 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~-----------~~~l~~~~r~~i~~~ia~----------------------d~~~~~K 642 (823)
.+||+|||.+|+|.+||..... ...+.-.+.+.||.+||. .+++.+|
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEE
Confidence 9999999999999999964211 112555555555555543 6788999
Q ss_pred eceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhh
Q 003402 643 ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSL 721 (823)
Q Consensus 643 I~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~ 721 (823)
|+||||+|.+...+++.....-.-+++||+||.++.++||++||||||||+||||+| |+.|+.....+. +-..
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E------VIe~ 717 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE------VIEC 717 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH------HHHH
Confidence 999999999888777765544556889999999999999999999999999999999 888875443321 1112
Q ss_pred ccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 722 ~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+.+++ -+.+..++.++..||+.||+.+|.+||+++||-..|+..
T Consensus 718 i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 718 IRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred HHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 222222 234556788899999999999999999999999999875
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=356.16 Aligned_cols=236 Identities=28% Similarity=0.416 Sum_probs=193.1
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
..+.+.+.++||+|.||.||+|.+.....||||.++.. ....+.|.+|+++|++|+|+|||+|+|+|..++..+|||||
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence 34556677999999999999999988889999999865 34457899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 603 MVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|++|+|.+||...... +.....||+..|+||+.+++..+||+||||||.+..+.+....
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~ 362 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE 362 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecC
Confidence 9999999999863221 2345678888999999999999999999999976666554332
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
...-++.|.|||.+..+.|+.|||||||||+||||+| |+.|+..... ..+.+.++...+-..+
T Consensus 363 -~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn---------------~ev~~~le~GyRlp~P 426 (468)
T KOG0197|consen 363 -GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN---------------EEVLELLERGYRLPRP 426 (468)
T ss_pred -CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH---------------HHHHHHHhccCcCCCC
Confidence 2345789999999999999999999999999999999 6666543221 1122333333344556
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..++..+.+||..||+.+|++|||+..+...|+..
T Consensus 427 ~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 427 EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 66788899999999999999999999999888765
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=341.66 Aligned_cols=237 Identities=29% Similarity=0.469 Sum_probs=182.8
Q ss_pred CcceeeeeccccceeEEeeeecCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-eEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG-EKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~--~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~-~~~lV~Ey 602 (823)
.+.+.+.||+|+||+||+|.+.....||||++..... ...++|.+|+.+|.+++|||||+++|+|.+.. ...|||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 3444567999999999999996655599999975432 22569999999999999999999999999988 79999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHHhcccc-----------------------ccCC-CceeceeeceeecCCCccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-----------------------DQHM-NPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia~-----------------------d~~~-~~KI~DFGla~~~~~~~~~ 658 (823)
|++|+|.++++.. ....+++.++++++..||+ +.++ ++||+|||+++......
T Consensus 122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 9999999999874 3345666666666555443 5665 99999999998765432
Q ss_pred ccccccccccccccccccc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 659 GNTKRIVGTYGYMSPEYAL--EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~--~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
...+...||+.|||||++. ..+|+.|+|||||||+||||+||+.||..... ...+......+ .+
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----~~~~~~v~~~~---------~R 264 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----VQVASAVVVGG---------LR 264 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcC---------CC
Confidence 2223368999999999999 56999999999999999999999999864432 12222222111 12
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
...+..+...+..++..||+.||+.||++.+++.+|+......
T Consensus 265 p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 265 PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 2223335667888999999999999999999999998764433
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-38 Score=347.74 Aligned_cols=237 Identities=24% Similarity=0.371 Sum_probs=194.2
Q ss_pred cCcceeeeeccccceeEEeeeecC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
....+.++||.|.||.||+|+++- ...||||.|+... .....+|+.|+.+|++++||||++|.|+.......+||
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 346678999999999999998753 3579999998764 34456899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc-
Q 003402 600 YEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ- 658 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~- 658 (823)
.|||+||+||.||+....+ ....+.||+..|+||+.+.+..+||+||||+|.+..+...
T Consensus 709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ 788 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 788 (996)
T ss_pred hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence 9999999999999764432 2356789999999999999999999999999988665411
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
..+..-.-+++|.|||.+...+||.+||||||||||||+++ |.+|+-...++ ++..-++...+-
T Consensus 789 ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ---------------dVIkaIe~gyRL 853 (996)
T KOG0196|consen 789 YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---------------DVIKAIEQGYRL 853 (996)
T ss_pred ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH---------------HHHHHHHhccCC
Confidence 11111222578999999999999999999999999999998 88997433222 122223334444
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..+.+++..+.++|+.|||+|-.+||.+.||+.+|+..+
T Consensus 854 PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 854 PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 567788899999999999999999999999999998874
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=354.46 Aligned_cols=238 Identities=29% Similarity=0.447 Sum_probs=189.3
Q ss_pred hcCcceeeeeccccceeEEeeeecC--C----cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN--G----QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~--~----~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
.++..+.+.||+|+||.||+|...+ + ..||||.+++. +.+...+|.+|..+|++++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3556778999999999999998754 3 24999999865 456678999999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc--------------------------cccCHHHHHHHHhccccccCCCceeceeecee
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK--------------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~--------------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~ 650 (823)
+|++|||++|+|..||+..+.. +...+.||+..|+|.+.+++..+||+||||||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence 9999999999999999765211 22345566777777777899999999999999
Q ss_pred ecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCcccc
Q 003402 651 MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729 (823)
Q Consensus 651 ~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 729 (823)
.+...++++......-+.+|||||.+.++.|++|+|||||||+||||+| |..|+...... .++.++ ...+
T Consensus 851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--~v~~~~---~~gg---- 921 (1025)
T KOG1095|consen 851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--EVLLDV---LEGG---- 921 (1025)
T ss_pred hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH--HHHHHH---HhCC----
Confidence 8777776665554455679999999999999999999999999999999 66666433221 111111 1122
Q ss_pred ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 730 l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
+-+.+..+...+.++|..||+.+|++||++..|++.++...
T Consensus 922 ------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 922 ------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred ------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 12335567778889999999999999999999999887653
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=324.38 Aligned_cols=227 Identities=24% Similarity=0.352 Sum_probs=186.8
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
..|...+.||+|||+.||+++. ..|+.||+|++.+. .....+...+||++.++|+|||||+++++|++.++.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688889999999999999998 67999999999764 2344567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|+|++|+|..++..... .|.+.+.||+.+.-|+..++++++||+|||||..+..+.. ..
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E--rk 175 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE--RK 175 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccc--cc
Confidence 99999999999873321 1556677888888889999999999999999999876532 23
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC--C
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE--V 739 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~--~ 739 (823)
.+++|||.|+|||++....++..+||||+||+||-|+.|++||.... +.+..+.+...+ .
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------------------vkety~~Ik~~~Y~~ 237 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------------------VKETYNKIKLNEYSM 237 (592)
T ss_pred ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------------------HHHHHHHHHhcCccc
Confidence 45899999999999999999999999999999999999999985321 111111111111 2
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.....+..+++...|+.||.+|||+++|+..
T Consensus 238 P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 238 PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 22445677889999999999999999999874
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=305.04 Aligned_cols=232 Identities=23% Similarity=0.304 Sum_probs=185.6
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-eEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG-EKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~-~~~lV~Ey 602 (823)
+++..+.||+|..|+|||+++.. ++.+|+|.+... .....+++.+|++++.+.+||+||.++|.|.... +..|+|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 34556899999999999999864 788999999543 3455678999999999999999999999999998 59999999
Q ss_pred ccCCCchhhccCCCc-------------------cc-ccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 603 MVNKSLDVFLFDPTK-------------------KH-LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~-------------------~~-~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
|.+|||+.++..... .| ...+.||+.+..||+.+..+.+||||||.++.+-+. ...
T Consensus 160 MDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a~ 235 (364)
T KOG0581|consen 160 MDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IAN 235 (364)
T ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----hcc
Confidence 999999999864211 12 356778999999999999999999999999987543 345
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH-
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL- 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~- 741 (823)
+++||..|||||-+.+..|+.++||||||+.++|+++|+.|+..........+......+.+. . ...+.
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p---------p-P~lP~~ 305 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP---------P-PRLPEG 305 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC---------C-CCCCcc
Confidence 689999999999999999999999999999999999999998654222222222211111111 0 11222
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+++.+++-.|+++||.+||++.|++++
T Consensus 306 ~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 306 EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 366789999999999999999999999875
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=307.45 Aligned_cols=180 Identities=26% Similarity=0.437 Sum_probs=154.0
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.+|.+.++||+|+||+||+|++.. +..||||.+... .....+-...|+++|+.++|||||+|++++..++..+||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 568888999999999999999865 789999999765 44556678999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccC------CCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQH------MNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~------~~~KI~DFGla~~~~~~~ 656 (823)
||.+|+|..||+..... +...+.||+.+.+||+.... -.+||+|||+||.+....
T Consensus 90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~ 169 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS 169 (429)
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh
Confidence 99999999999765322 23455667777778776433 568999999999986543
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVY 707 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~ 707 (823)
...+.+|++-|||||+++.++|+.|+|+||.|++|||+++|+.||...
T Consensus 170 ---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 170 ---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred ---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 345689999999999999999999999999999999999999998643
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=315.13 Aligned_cols=245 Identities=24% Similarity=0.389 Sum_probs=192.6
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
+...+.+.++||+|.||.|.+++...+..||||+++.... ....+|.+|+++|.+++|||||+|+|+|..++..++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 3445667799999999999999998889999999987644 345899999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 602 YMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||++|+|.+||...... ..+.+.||+..++|++.|.++++||+|||++|.+...+++..
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 99999999999654221 123444555555566669999999999999998888887777
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
..+.+-+++|||||.+..++|+++||||+|||+|||+++ +.+|++....+ +.+..+..+...+..... ..
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~~~~~------l~ 767 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQGRQVV------LS 767 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCCccee------cc
Confidence 777888999999999999999999999999999999975 66777544332 112222222111111111 12
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+.-+...+.++++.||..|.++||++++|...|...
T Consensus 768 ~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 768 RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 2334566788999999999999999999999988654
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=316.55 Aligned_cols=238 Identities=24% Similarity=0.391 Sum_probs=193.1
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
-...++...++||-|.||.||.|.|+. ...||||.|+.. .-..++|+.|+.+|+.|+|||+|+|+|+|......|||+
T Consensus 264 meRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 264 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred ccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence 334456677999999999999999976 678999999875 345789999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 601 EYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|||.+|+|.+||+...+. ....+.||+..|+|.+..++..+||+||||++++..+.+..
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA 422 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA 422 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence 999999999999765443 22456778888888888999999999999999988776543
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.. ...-++.|.|||.+....|+.|+|||+|||+||||.| |..|+... + +..++.+. +...+.+
T Consensus 423 HA-GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----d-lSqVY~LL---------EkgyRM~ 486 (1157)
T KOG4278|consen 423 HA-GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----D-LSQVYGLL---------EKGYRMD 486 (1157)
T ss_pred cc-CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----c-HHHHHHHH---------hcccccc
Confidence 22 1233678999999999999999999999999999998 66665321 1 23333333 3333444
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.+..+.+.+.++|+.||+.+|.+||++.|+-+.+|..+
T Consensus 487 ~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 487 GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 45667788999999999999999999999999887643
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=300.54 Aligned_cols=234 Identities=22% Similarity=0.292 Sum_probs=181.2
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChh-------hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ-------GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~-------~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
.+.|.+.+.||+|+||.|-+|.-. +|+.||||++++.... ......+|+++|++++|||||++++++..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 356788899999999999999754 5999999999754211 12235799999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccc---cCCCceeceeeceeecC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQD---QHMNPKISDFGMARMFG 653 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d---~~~~~KI~DFGla~~~~ 653 (823)
.|||||||.+|+|.+++..... .|..++.||+.+++||+.. ++..+||+||||||..+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 9999999999999888754321 1556778888888999874 45789999999999876
Q ss_pred CCccccccccccccccccccccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccc
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALEGV---FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~~~---~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
.. ..+++.+||+.|.|||++...- +..|+|+||+|||||-++||-+||+....+. .+.. ....++...
T Consensus 331 ~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-sl~e----QI~~G~y~f- 401 (475)
T KOG0615|consen 331 EG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-SLKE----QILKGRYAF- 401 (475)
T ss_pred cc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-cHHH----HHhcCcccc-
Confidence 33 3456789999999999998654 3458999999999999999999997554332 1111 111111100
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.........++..+++.++|+.||++|||+.|+++.
T Consensus 402 -----~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 402 -----GPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred -----cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 112334567889999999999999999999998875
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=294.18 Aligned_cols=234 Identities=26% Similarity=0.347 Sum_probs=179.3
Q ss_pred cCcceeeeeccccceeEEeee-ecCCcEEEEEEecc--CChhhHHHHHHHHHHHHhcCCCceeeEEe-EEEeCCe-EEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRNLVRLLG-CCIEQGE-KILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~-~~~~~~VAVK~l~~--~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g-~~~~~~~-~~lV 599 (823)
.+|++.++||+|+||.|||+. +.+|..||.|.++- -+.+..+....|+.+|++|+|||||++++ -+.++++ ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 458888999999999999996 46799999998863 24556678999999999999999999999 5566665 8899
Q ss_pred EEcccCCCchhhccCCCcc-----------------------cc----cCHHHHHHHHhccccccCCCceeceeeceeec
Q 003402 600 YEYMVNKSLDVFLFDPTKK-----------------------HL----LGWQLRVRIIDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~-----------------------~~----l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
||||..|+|...+..-... |. -...||+.++.||..+.++.+||+||||+|.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999888532111 11 11345666677888899999999999999998
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
..+.. ...+.+|||.||+||.+.+..|+.||||||+||++|||..-++||... ++........ .+...
T Consensus 179 ~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~-qgd~~---- 246 (375)
T KOG0591|consen 179 SSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIE-QGDYP---- 246 (375)
T ss_pred cchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHH-cCCCC----
Confidence 66543 345689999999999999999999999999999999999999998432 3332222211 11110
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.-.....+..+..++..|+..||+.||+...+++.+..
T Consensus 247 ----~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 247 ----PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ----CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 01113456778889999999999999996666665544
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=311.13 Aligned_cols=241 Identities=28% Similarity=0.389 Sum_probs=184.3
Q ss_pred HHHHhcCcceeeeeccccceeEEeeeecC--C--cE-EEEEEecc---CChhhHHHHHHHHHHHHhcCCCceeeEEeEEE
Q 003402 520 VTAATENFSIQSKLGEGGFGPVYKGRLLN--G--QE-VAVKRLSN---QSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591 (823)
Q Consensus 520 ~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~--~--~~-VAVK~l~~---~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~ 591 (823)
.+...++..+.++||+|+||.||+|++.. + .. ||||..+. ......++|++|+++|++++|||||+++|++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34445666777999999999999998754 2 23 89999874 34567789999999999999999999999999
Q ss_pred eCCeEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 592 EQGEKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 592 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
.....+||||+|++|+|+++|...... |.....||+..|+|.+...+..+||+||||++.
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999999999764321 345567888888898889989999999999986
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
-. .+........-+.+|+|||.+..+.|++|+|||||||++||+++ |..|+..... ..+..+ ....
T Consensus 312 ~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~--~~v~~k---I~~~------ 378 (474)
T KOG0194|consen 312 GS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN--YEVKAK---IVKN------ 378 (474)
T ss_pred Cc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH--HHHHHH---HHhc------
Confidence 43 12111112245789999999999999999999999999999999 6777643211 111111 1011
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..+...+......+..++..||+.+|++||+|.++.+.|+...
T Consensus 379 ---~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~ 421 (474)
T KOG0194|consen 379 ---GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE 421 (474)
T ss_pred ---CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence 1112223345566777888999999999999999999988763
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=292.26 Aligned_cols=241 Identities=21% Similarity=0.316 Sum_probs=186.8
Q ss_pred hcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.+.|++.++||.|.-++||+|+. +.+..||||++.-. .....+++++|+..|+.++|||||+++..|..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 36799999999999999999975 45899999999743 33447899999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCc---------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc--
Q 003402 602 YMVNKSLDVFLFDPTK---------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ-- 658 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~---------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~-- 658 (823)
||.+||+.++++..-. .|..+..||+.+|-+|+.|.++.+||+|||.+..+......
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~ 184 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQV 184 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceee
Confidence 9999999888753211 15567788999999999999999999999988766433211
Q ss_pred cccccccccccccccccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEG--VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~--~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
....+++||+.|||||+++.. -|+.|+|||||||+..|+++|..||..++....-+.. . .+....+.-..+.
T Consensus 185 ~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t-----L-qn~pp~~~t~~~~ 258 (516)
T KOG0582|consen 185 TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT-----L-QNDPPTLLTSGLD 258 (516)
T ss_pred EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH-----h-cCCCCCcccccCC
Confidence 112568999999999997654 4899999999999999999999999876654322211 1 1111111111111
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.+........+.+++-.|++.||.+|||++++++
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 2222223446788899999999999999999976
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=304.59 Aligned_cols=245 Identities=25% Similarity=0.376 Sum_probs=187.0
Q ss_pred HHHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 518 ~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
.+..+..+.+.+.+.||+|+||+||+|+|.. .||||.|+.. ..+..+.|++||..+++.+|.||+-+.|+|..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 4555666778888999999999999999864 6999999754 45677899999999999999999999999999888
Q ss_pred EEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
.||+-+|++.+|+.+|+....+ |...+.||+..-.||..++++.+||.||||+..-..-
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence 9999999999999999764322 3344555555566777788899999999999653222
Q ss_pred ccccccccccccccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALE---GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~---~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
..........|..-|||||+++. .+|+..|||||||||+|||+||..|+.....+... +.-++..-..|
T Consensus 542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi--------fmVGrG~l~pd 613 (678)
T KOG0193|consen 542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII--------FMVGRGYLMPD 613 (678)
T ss_pred ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE--------EEecccccCcc
Confidence 11122334568889999999974 46999999999999999999999998743333221 11121111111
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.. .....+..++.+++..||..++++||.+.+|+.+|+..+
T Consensus 614 ~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 614 LS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred ch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 11 122345667888999999999999999999999887764
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-33 Score=295.27 Aligned_cols=230 Identities=20% Similarity=0.294 Sum_probs=184.4
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
..|...+.||+|.||.||||.... ++.||+|.+... .....++..+|+.+++.++|+||.+++|.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 346666899999999999998754 789999999754 344567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 603 MVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
|.+|++.+.|..... .|...-.||+.+|.||....++.+|++|||++..+......+ .+
T Consensus 93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr--~t 170 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR--KT 170 (467)
T ss_pred hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc--cc
Confidence 999999888754322 133445677888899999888999999999999886654433 56
Q ss_pred ccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHH
Q 003402 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~ 743 (823)
++||+.|||||++....|+.|+|||||||+.+||++|.+|+.........++ +.+-..|.+.+ ..
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-----------Ipk~~PP~L~~----~~ 235 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-----------IPKSAPPRLDG----DF 235 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-----------ccCCCCCcccc----cc
Confidence 8999999999999988999999999999999999999999865433211000 11111233333 44
Q ss_pred HHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 744 LVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 744 ~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+.+++..|+++||+.||++.++++.
T Consensus 236 S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 236 SPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 5568889999999999999999999863
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-33 Score=300.88 Aligned_cols=223 Identities=23% Similarity=0.330 Sum_probs=174.7
Q ss_pred ceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCC
Q 003402 528 SIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKS 607 (823)
Q Consensus 528 ~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gs 607 (823)
..++=||.|+-|.||+|++. ++.||||+++... ..+|+.|++|+|||||.+.|+|....-++||||||+.|-
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 34578999999999999994 5889999875321 358899999999999999999999999999999999999
Q ss_pred chhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccccc
Q 003402 608 LDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668 (823)
Q Consensus 608 L~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~ 668 (823)
|...|+..... |...+.||+.+.-||+...+-.+||+|||.++.+... ...-.++||.
T Consensus 199 L~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTV 275 (904)
T KOG4721|consen 199 LYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAGTV 275 (904)
T ss_pred HHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhhhH
Confidence 99998754321 3344455555556777788889999999999976543 1223589999
Q ss_pred cccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHH
Q 003402 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYI 748 (823)
Q Consensus 669 ~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~ 748 (823)
.|||||++++.+.++|+||||||||||||+||..|+.......+ .|.-+ ...+.-.++..+.+-+.
T Consensus 276 aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI--------IwGVG------sNsL~LpvPstcP~Gfk 341 (904)
T KOG4721|consen 276 AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI--------IWGVG------SNSLHLPVPSTCPDGFK 341 (904)
T ss_pred hhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee--------EEecc------CCcccccCcccCchHHH
Confidence 99999999999999999999999999999999999743322110 01111 11222334555666777
Q ss_pred HHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 749 NVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 749 ~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
-++..||+..|..||++++++..|+-.
T Consensus 342 lL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 342 LLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred HHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 789999999999999999999998654
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-32 Score=294.11 Aligned_cols=240 Identities=22% Similarity=0.326 Sum_probs=192.1
Q ss_pred HHHHHhcCcceeeeeccccceeEEeeeecC---C--cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 003402 519 SVTAATENFSIQSKLGEGGFGPVYKGRLLN---G--QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE 592 (823)
Q Consensus 519 ~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~---~--~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~ 592 (823)
..+.+.+...+.++||+|.||.||+|.+.+ | ..||||..+.. .....+.|+.|..+|++++|||||+|+|+|.+
T Consensus 383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 334455667777999999999999998643 2 36999998864 45567889999999999999999999999976
Q ss_pred CCeEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeec
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
...|||||.++.|.|..||...... +...+.||+..++||+....-.+|++||||+|.+
T Consensus 463 -~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 463 -QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred -cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 4789999999999999999654322 3456778999999999999999999999999999
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
..+.++..+ +..-++.|||||.+.-.+|+++||||-|||.+|||++ |.+||...... ++-..+
T Consensus 542 ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs---------------DVI~~i 605 (974)
T KOG4257|consen 542 EDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS---------------DVIGHI 605 (974)
T ss_pred cccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc---------------ceEEEe
Confidence 877665544 4556789999999999999999999999999999998 88887432211 111112
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+..-+-..++.++..+..++.+||..+|.+||++.++...|...
T Consensus 606 EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 606 ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 22222345667788899999999999999999999998877543
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-32 Score=301.35 Aligned_cols=240 Identities=26% Similarity=0.380 Sum_probs=174.1
Q ss_pred HhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC-
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ- 593 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~- 593 (823)
+.++|++.++||+|+||.||+|... .++.||||++.... ....+.+.+|+.++.++ +|||||+++++|.+.
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4577999999999999999999742 25689999997543 23456799999999999 899999999998764
Q ss_pred CeEEEEEEcccCCCchhhccCCCcc-------------------------------------------------------
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTKK------------------------------------------------------- 618 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~~------------------------------------------------------- 618 (823)
+..++||||+++|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4688999999999999888542110
Q ss_pred ----cccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCCCccccccccccccccccc
Q 003402 619 ----HLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672 (823)
Q Consensus 619 ----~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmA 672 (823)
..+.+. ||+..+.||+.+.++.+||+|||+++.+..+..........+|+.|||
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 012222 222233455557888999999999987644332222333457789999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHH
Q 003402 673 PEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVA 751 (823)
Q Consensus 673 PE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~ 751 (823)
||++.+..++.++|||||||+||||++ |+.|+....... .+. .....+... ..+......+.+++
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~----~~~~~~~~~---------~~~~~~~~~l~~li 310 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFC----QRLKDGTRM---------RAPENATPEIYRIM 310 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHH----HHHhcCCCC---------CCCCCCCHHHHHHH
Confidence 999999999999999999999999997 888875432211 111 111111100 11122345678899
Q ss_pred HHccccCcCCCCCHHHHHHHHhccc
Q 003402 752 LLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 752 ~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..||+.||++||++.+|+++|+..+
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-32 Score=285.85 Aligned_cols=224 Identities=22% Similarity=0.302 Sum_probs=178.7
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
..++|++.++||+|+||+||.++..+ ++.+|+|.+++.. ....+..++|..+|.+++||.||+++-.|.+.+.+||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 34789999999999999999998765 8899999998652 2345678899999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+||+.+|.|..+|..... .|..++.+|+.+++||+.|+++++||+||||+|....+ ..
T Consensus 103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~--~~ 180 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD--GD 180 (357)
T ss_pred EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccC--CC
Confidence 9999999999998864322 15567788888999999999999999999999964333 23
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.+.+++||+.|||||++.+..|+..+|.||+||++|||++|.+||...+.. ....... .++ + ...
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~-----~~~~~I~-~~k--------~-~~~ 245 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK-----KMYDKIL-KGK--------L-PLP 245 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH-----HHHHHHh-cCc--------C-CCC
Confidence 455689999999999999999999999999999999999999998543211 1111111 111 0 011
Q ss_pred CHHHHHHHHHHHHHccccCcCCCC
Q 003402 740 SLPMLVRYINVALLCVQENAEDRP 763 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RP 763 (823)
+.-...+..+++...++.||++|-
T Consensus 246 p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 246 PGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CccCCHHHHHHHHHHhccCHHHhc
Confidence 111345677888899999999995
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-32 Score=299.98 Aligned_cols=230 Identities=25% Similarity=0.318 Sum_probs=181.1
Q ss_pred cCcceeeeeccccceeEEeeeecC--Cc--EEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN--GQ--EVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~--~~--~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
+.+.+.++||+|.||.|++|.|.. |+ .||||.|+.... .....|++|+.+|.+|+|||+|||||+..+ ....||
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 455667999999999999998864 44 689999986543 367899999999999999999999999988 788999
Q ss_pred EEcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc-c
Q 003402 600 YEYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE-L 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~-~ 657 (823)
+|.++.|||.+.|++.... +.....||+..++|++.-....+||+||||.|.++.++ .
T Consensus 189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 9999999999999772222 22345677777778877788899999999999987554 3
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
+.......-...|.|||.+....|+.+||||+|||++|||+| |..|+-.. ..-.+.+.+|..-+
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~---------------~g~qIL~~iD~~er 333 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC---------------RGIQILKNIDAGER 333 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC---------------CHHHHHHhcccccc
Confidence 333333344678999999999999999999999999999999 55554221 11122334443323
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
-.-+..+.+++.++++.||..+|++|||+..|.+
T Consensus 334 LpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred CCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 3446678899999999999999999999999974
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=283.89 Aligned_cols=242 Identities=27% Similarity=0.410 Sum_probs=173.8
Q ss_pred cCcceeeeeccccceeEEeeeecC-----------------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-----------------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRL 586 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-----------------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l 586 (823)
++|.+.++||+|+||.||++.+.+ +..||||.+.... .....+|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568888999999999999997532 3479999987542 3345689999999999999999999
Q ss_pred EeEEEeCCeEEEEEEcccCCCchhhccCCCc----------------c----------------------cccCHHHHHH
Q 003402 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTK----------------K----------------------HLLGWQLRVR 628 (823)
Q Consensus 587 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~----------------~----------------------~~l~~~~r~~ 628 (823)
++++.+.+..++||||+++|+|.+++..... . |..+..|++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl 164 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL 164 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence 9999999999999999999999988743211 0 1112223333
Q ss_pred HHhccccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCC--CCCCC
Q 003402 629 IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK--KNTGV 706 (823)
Q Consensus 629 i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~--~p~~~ 706 (823)
.+.||+.+.++.+||+|||+++.+.............++..|||||++..+.++.++|||||||++|||+++. .|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 4455556788899999999998765443333334456788999999999999999999999999999999754 44432
Q ss_pred CCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 707 YNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 707 ~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.. .......+........ ... ....+......+.+++.+||+.||++||||.+|++.|++
T Consensus 245 ~~--~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 245 LT--DEQVIENAGEFFRDQG-RQV-----YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CC--HHHHHHHHHHHhhhcc-ccc-----cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 21 1122222211111110 000 001122344578899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=286.74 Aligned_cols=222 Identities=17% Similarity=0.297 Sum_probs=167.9
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCChhh---HHHHHHHHHHHHhcCCCceeeEEeEEEe----CCeEEEEEEcc
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQG---LKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEKILIYEYM 603 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~---~~~f~~Ev~~l~~l~H~Niv~l~g~~~~----~~~~~lV~Ey~ 603 (823)
..||+|++|.||+|.+ +++.||||.++...... .+.|.+|+.++.+++|||||+++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 6799999999999998 78899999997543222 5778899999999999999999999987 35789999999
Q ss_pred cCCCchhhccCCCcccccCHH-----------------------HHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQ-----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~-----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
++|+|.+++..... +.+. ||...+.+|+.++++.+||+|||+++.+....
T Consensus 105 ~~g~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---- 177 (283)
T PHA02988 105 TRGYLREVLDKEKD---LSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---- 177 (283)
T ss_pred CCCcHHHHHhhCCC---CChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc----
Confidence 99999999864321 2222 33333445555788899999999998764322
Q ss_pred cccccccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 661 TKRIVGTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
....||+.|||||++.+ ..++.++|||||||++|||++|+.|+...... .+... ....+. ...
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--~~~~~---i~~~~~---------~~~ 242 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--EIYDL---IINKNN---------SLK 242 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--HHHHH---HHhcCC---------CCC
Confidence 23468999999999976 68999999999999999999999998643211 11111 101110 011
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+......+.+++..||+.||++||||.+|++.|+..
T Consensus 243 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 243 LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 1223455788899999999999999999999998754
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=283.32 Aligned_cols=229 Identities=32% Similarity=0.490 Sum_probs=166.8
Q ss_pred ceeeeeccccceeEEeeeec-----CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 528 SIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 528 ~~~~~LG~G~fG~Vy~g~~~-----~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++.+.||.|.||.||+|++. .+..|+||.++.. .....++|.+|++.+.+++||||++++|+|.+.+..++|+|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 45689999999999999887 2568999999654 33457899999999999999999999999998888999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHHhccc----------------------cccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA----------------------QDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia----------------------~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++|+|.++|.... ...+.+..+..++.+|+ .++++.+||+|||+++.........
T Consensus 82 ~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp --TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred ccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999997651 22355565555554443 2678899999999999874333223
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......+...|+|||.+....++.++||||||+++|||++ |+.|+... ....+.... ..+.. ..
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~~~~~~----~~~~~---------~~ 225 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEEIIEKL----KQGQR---------LP 225 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHHHHHHH----HTTEE---------TT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccc----ccccc---------ce
Confidence 3333567889999999999999999999999999999999 66775432 111111111 11111 11
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
.+......+.+++..||+.+|++||+|.+|++.|
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1222345678899999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-32 Score=294.06 Aligned_cols=232 Identities=22% Similarity=0.338 Sum_probs=185.8
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
..|...++||+|+.|.||.++- ..++.||||++........+-..+|+.+|+..+|+|||+++..+..++++|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 3456668999999999999975 458899999998776666667899999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCc------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 604 VNKSLDVFLFDPTK------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 604 ~~gsL~~~l~~~~~------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
++|+|.+.+..... .|..+..||+.+..+|+.+.++.+||+|||++..+..+.. ...+++
T Consensus 353 ~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--KR~TmV 430 (550)
T KOG0578|consen 353 EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--KRSTMV 430 (550)
T ss_pred CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--cccccc
Confidence 99999887743211 2445666777778888889999999999999998866544 344689
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
||+.|||||++....|++|+||||||++++||+-|.+||-. +. -+...|.....+. .++ ..+.....
T Consensus 431 GTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln--E~---PlrAlyLIa~ng~-P~l-------k~~~klS~ 497 (550)
T KOG0578|consen 431 GTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN--EN---PLRALYLIATNGT-PKL-------KNPEKLSP 497 (550)
T ss_pred CCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC--CC---hHHHHHHHhhcCC-CCc-------CCccccCH
Confidence 99999999999999999999999999999999999999742 11 1222222222322 111 12333456
Q ss_pred HHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 746 RYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.++..+||+.|+++||++.|+++.
T Consensus 498 ~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 498 ELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 78889999999999999999999874
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=324.44 Aligned_cols=234 Identities=25% Similarity=0.439 Sum_probs=180.6
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
..+...++||+|+||.||+|+. .+++.||||+++..... ...|++.+++++|||||+++|+|.+.+..++|||||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~ 765 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI 765 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence 4567778999999999999987 46899999998754321 235688999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHHhccc-------------------------cccCCCceeceeeceeecCCCccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA-------------------------QDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia-------------------------~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
++|+|.++++. +.|..+..++.+|+ .+.+..+|+. ||++.....
T Consensus 766 ~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---- 834 (968)
T PLN00113 766 EGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---- 834 (968)
T ss_pred CCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence 99999999853 45655555554443 2444445553 555443221
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc-
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN- 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~- 737 (823)
.....||++|||||++.+..++.|+|||||||++|||+||+.|+.........+..++............+|+.+..
T Consensus 835 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (968)
T PLN00113 835 --DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD 912 (968)
T ss_pred --CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC
Confidence 12246899999999999999999999999999999999999998654444455666665555455556666776643
Q ss_pred -CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 738 -EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 738 -~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+.++..++.+++.+||+.||++||+|.||+++|+..
T Consensus 913 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 913 VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 33456777899999999999999999999999999876
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=284.06 Aligned_cols=235 Identities=23% Similarity=0.343 Sum_probs=179.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--eEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG--EKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~--~~~lV~E 601 (823)
.++...+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|.+++|||||+++|...... .+.+.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 346667999999999999998765 8999999987654334677999999999999999999999855544 6899999
Q ss_pred cccCCCchhhccCCCcc--------------------cccCHHHHHHHHhcccccc-CCCceeceeeceeecCCC-cccc
Q 003402 602 YMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQ-HMNPKISDFGMARMFGGD-ELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~-~~~~KI~DFGla~~~~~~-~~~~ 659 (823)
|+++|+|.+++...... |..++.|++.++.||+.+. ++.+||+|||+++..... ....
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999999998754311 3345666777778888898 799999999999987641 1222
Q ss_pred ccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
....+.||+.|||||++.++.. ..++|||||||++.||+||++|+... . ............... ..
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~---~~~~~~~~ig~~~~~---------P~ 243 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F---EEAEALLLIGREDSL---------PE 243 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c---chHHHHHHHhccCCC---------CC
Confidence 3445899999999999996543 35999999999999999999998643 1 111111111111111 13
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
++........+++..|++.||+.|||+.++++..
T Consensus 244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 3334556788899999999999999999999864
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=297.70 Aligned_cols=238 Identities=25% Similarity=0.339 Sum_probs=172.8
Q ss_pred hcCcceeeeeccccceeEEeeee------cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCe
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~------~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~ 595 (823)
.++|++.++||+|+||.||+|+. ..+..||||+++... ....+.+.+|+.++..+ +|||||+++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45688889999999999999964 235689999997432 33456789999999999 89999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcc---------------------------------------------------------
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK--------------------------------------------------------- 618 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~--------------------------------------------------------- 618 (823)
.++||||+++|+|.+++......
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 99999999999999888542110
Q ss_pred ---------------cccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 619 ---------------HLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 619 ---------------~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
..+++..... .+.+|+.+.+..+||+|||+++.+.........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 273 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVK 273 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccccccc
Confidence 0123333222 233444467888999999999876543322222
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....++..|||||++.+..++.++|||||||++|||++ |..|+.....+. .+. .....+.. ...+
T Consensus 274 ~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~----~~~~~~~~---------~~~~ 339 (375)
T cd05104 274 GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFY----KMIKEGYR---------MLSP 339 (375)
T ss_pred CCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHH----HHHHhCcc---------CCCC
Confidence 23456778999999999999999999999999999998 777764332211 111 11111110 0011
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.....++.+++..||+.||++||+|.||+++|+..
T Consensus 340 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11234678899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-32 Score=290.13 Aligned_cols=226 Identities=25% Similarity=0.374 Sum_probs=182.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|.+.+.||+|+||.||||+-+ +.+.||+|.+.+. .....+.+.+|++++++++|||||.++..|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778899999999999999765 4789999999764 33456779999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
|+.+ +|..+|.+.... |...+.||+...++|+.+..+.+|+||||+||....+ ....+
T Consensus 82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~--t~vlt 158 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN--TSVLT 158 (808)
T ss_pred hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC--ceeee
Confidence 9977 999988654321 3345556666778899999999999999999987543 23455
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc--CCC
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN--EVS 740 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~--~~~ 740 (823)
++.|||-|||||.+.+++|+..+|.||+||+|||+++|++||... .+ .+++..++.+ ..+
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si-------------~~Lv~~I~~d~v~~p 220 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SI-------------TQLVKSILKDPVKPP 220 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HH-------------HHHHHHHhcCCCCCc
Confidence 689999999999999999999999999999999999999998321 11 1112122211 123
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......++.++...+++||..|-+-.+++..
T Consensus 221 ~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 221 STASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred ccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 3556678889999999999999999999764
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-31 Score=292.40 Aligned_cols=225 Identities=22% Similarity=0.324 Sum_probs=185.8
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCe
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~ 595 (823)
....++|.++++||+|+||+|+++.++. ++.+|||.|++.. ....+..+.|.+++... +||-|++|++++...++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 4456789999999999999999999865 7899999998763 34567788899888777 59999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCc------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++.||||+.+|++..+.+...- .|..++.+|+.+.+||+.|.+|.+||+||||+|.-....
T Consensus 444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g- 522 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG- 522 (694)
T ss_pred EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCC-
Confidence 9999999999996655542211 155667778888999999999999999999999754322
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
..+.+++|||.|||||++.+..|+.++|-|||||+||||+.|..||... .-.++.|.++.+
T Consensus 523 -~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd------------------dEee~FdsI~~d 583 (694)
T KOG0694|consen 523 -DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD------------------DEEEVFDSIVND 583 (694)
T ss_pred -CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC------------------CHHHHHHHHhcC
Confidence 3566799999999999999999999999999999999999999998532 224455555544
Q ss_pred C--CCHHHHHHHHHHHHHccccCcCCCCCH
Q 003402 738 E--VSLPMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 738 ~--~~~~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
+ ++.-...+.+.|+...+..+|++|.-+
T Consensus 584 ~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 3 344567788999999999999999887
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=294.54 Aligned_cols=239 Identities=27% Similarity=0.397 Sum_probs=173.1
Q ss_pred HhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQG 594 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~ 594 (823)
..++|++.+.||+|+||.||+++.. +++.||||+++... ....+.+.+|+.+++.+ +|+|||+++++|.+.+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3457889999999999999998742 24589999997542 33456789999999999 8999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCc---------------------------------------------------------
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK--------------------------------------------------------- 617 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 617 (823)
..++||||+++|+|.+++.....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 99999999999999988743210
Q ss_pred ----------ccccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 618 ----------KHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 618 ----------~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
...+.+. ||+..+.||+.+++..+||+|||+++.+.............
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~ 275 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR 275 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence 0012222 22233344555778889999999998764433222222344
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHH
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~ 744 (823)
+++.|||||++.+..++.++|||||||++|||++ |+.|+....... .+ ......+ .....+....
T Consensus 276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~----~~~~~~~---------~~~~~~~~~~ 341 (374)
T cd05106 276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KF----YKMVKRG---------YQMSRPDFAP 341 (374)
T ss_pred CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HH----HHHHHcc---------cCccCCCCCC
Confidence 6778999999999999999999999999999997 998875432211 11 1111111 0000111123
Q ss_pred HHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 745 VRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 745 ~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+.+++..||+.||++||++.+|+++|+..
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 5678899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=266.44 Aligned_cols=244 Identities=23% Similarity=0.301 Sum_probs=178.0
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
+.|+...++|+|+||.|||++.++ |+.||||++.... ....+--++|+++|++++|+|||.|+.+|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 356777899999999999999876 9999999996542 2333457899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCC-------------------cccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 602 YMVNKSLDVFLFDPT-------------------KKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 602 y~~~gsL~~~l~~~~-------------------~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
||+..-|+++=..+. ..|.....||+.+++||+...++.+||||||+|+.+... ....+
T Consensus 82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p--gd~YT 159 (396)
T KOG0593|consen 82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP--GDNYT 159 (396)
T ss_pred ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC--cchhh
Confidence 998766655432221 124556778888999999999999999999999998632 12234
Q ss_pred cccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-Cccchh---------HHHHhhccCCcccccc
Q 003402 663 RIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNT-DSFNLL---------GHAWSLCKNDRAHELM 731 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~-~~~~l~---------~~~~~~~~~~~~~~l~ 731 (823)
..+.|..|.|||.+.+ .+|+..+||||.||++.||++|.+-+..... +...++ .+..-...+.....+.
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 4788999999999887 7899999999999999999999987643221 111111 1111111111111111
Q ss_pred CcccccCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 732 DPVLQNEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 732 d~~l~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
-|......+ +....-+++++..|++.||.+|++-+|++.
T Consensus 240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111111111 123345789999999999999999999875
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=278.83 Aligned_cols=243 Identities=24% Similarity=0.342 Sum_probs=178.8
Q ss_pred hcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~l 598 (823)
.+.|+.+++||+|.||.||||+. .+|+.||+|+++... .....-..+||.+|++|+|||||+|.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 35688889999999999999985 458999999987543 33455678999999999999999999999887 78999
Q ss_pred EEEcccCCCchhhccCC--------------------CcccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 599 IYEYMVNKSLDVFLFDP--------------------TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~--------------------~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|+|||++ +|.-++..+ ...|.-+..||+.+..||+.|.++.+||+|||||++...+...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence 9999987 554444332 1224556778888999999999999999999999988766544
Q ss_pred cccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC--------ccc-
Q 003402 659 GNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND--------RAH- 728 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~--------~~~- 728 (823)
..+. .+-|+.|.|||.+++. .|++++|+||.||||.||++|++.+.... ...-+.....++... ++.
T Consensus 275 ~~T~-rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t--EveQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 275 PYTS-RVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT--EVEQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred cccc-ceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc--HHHHHHHHHHHhCCCChhccccccCCc
Confidence 4443 5569999999999875 69999999999999999999998764322 222223333333211 111
Q ss_pred -cccCcc------cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 -ELMDPV------LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 -~l~d~~------l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+.+. +.+. -.......++++...|..||.+|.|+.++++.
T Consensus 352 ~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 352 ATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 111111 1100 01123346677778888999999999998764
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=273.97 Aligned_cols=235 Identities=26% Similarity=0.441 Sum_probs=175.0
Q ss_pred cCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
++|++.+.||+|+||.||+|.... ...||+|.+.... ....++|.+|+.++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998643 2579999987543 334567999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcc-------------cccCHHHH----------------------HHHHhccccccCCCce
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------HLLGWQLR----------------------VRIIDGIAQDQHMNPK 642 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------~~l~~~~r----------------------~~i~~~ia~d~~~~~K 642 (823)
++|||+++|+|.+++...... +.+.+... .....+|..++++.+|
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~ 164 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK 164 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence 999999999999988542110 12233222 2223344447788899
Q ss_pred eceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhh
Q 003402 643 ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSL 721 (823)
Q Consensus 643 I~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~ 721 (823)
|+|||+++...............+++.|||||.+.+..++.++|||||||++|||++ |..|+...... .+. ..
T Consensus 165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~----~~ 238 (283)
T cd05048 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVI----EM 238 (283)
T ss_pred ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHH----HH
Confidence 999999987644333333334567889999999999999999999999999999998 88887533221 111 11
Q ss_pred ccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 722 ~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
...+.. ...+.....++.+++.+||+.||++||++.+|+++|+.
T Consensus 239 i~~~~~---------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IRSRQL---------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCc---------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111111 11223345678899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=291.26 Aligned_cols=239 Identities=23% Similarity=0.347 Sum_probs=173.9
Q ss_pred HhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQG 594 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~ 594 (823)
..++|.+.++||+|+||.||+|+... +..||||+++... ....+.|.+|+++++++. |||||+++++|.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 45678899999999999999997532 3479999997543 233467999999999996 999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCcc--------------------------------------------------------
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKK-------------------------------------------------------- 618 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~-------------------------------------------------------- 618 (823)
..+|||||+++|+|.++|......
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 999999999999999887532100
Q ss_pred -------------------------------------cccCHHHHHHH----------------------HhccccccCC
Q 003402 619 -------------------------------------HLLGWQLRVRI----------------------IDGIAQDQHM 639 (823)
Q Consensus 619 -------------------------------------~~l~~~~r~~i----------------------~~~ia~d~~~ 639 (823)
..+.+.....+ +.+|+.+.+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~ 274 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK 274 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC
Confidence 01222222222 2334446778
Q ss_pred CceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHH
Q 003402 640 NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHA 718 (823)
Q Consensus 640 ~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~ 718 (823)
.+||+|||+++.+.............+++.|||||.+.+..++.++|||||||++|||++ |+.|+.....+. .+
T Consensus 275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-~~---- 349 (400)
T cd05105 275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-TF---- 349 (400)
T ss_pred EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-HH----
Confidence 899999999987654332222333567889999999999999999999999999999997 888875322111 01
Q ss_pred HhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 719 WSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 719 ~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+.....+. ....+......+.+++..||+.||++||++.+|+++|+..
T Consensus 350 ~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 350 YNKIKSGY---------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHHHhcCC---------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 11111110 0011123345688899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-30 Score=274.08 Aligned_cols=234 Identities=23% Similarity=0.307 Sum_probs=172.6
Q ss_pred hcCcceeeeeccccceeEEeeeec----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|++.+.||+|+||.||+|.+. .+..||+|.++... ....+.|.+|+.++.+++||||++++|++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356889999999999999999763 35689999997643 2334679999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++|+|++++..... .+.+.. ++..+.+|+.+.++.+|++|||++.......
T Consensus 84 v~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999999999865321 223332 2233345555788899999999886543222
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
. .......++..|+|||.+....++.++|||||||++||+++ |+.|+...... .+.... ..+.
T Consensus 162 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~----~~~~--------- 225 (266)
T cd05064 162 I-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAV----EDGF--------- 225 (266)
T ss_pred h-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHH----HCCC---------
Confidence 1 11222356788999999999999999999999999999875 88887433211 111111 1110
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+......+.+++..||+.+|++||++.+|.+.|+..
T Consensus 226 ~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0011223445688899999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-30 Score=276.01 Aligned_cols=234 Identities=25% Similarity=0.409 Sum_probs=174.7
Q ss_pred cCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
++|.+.+.||+|+||.||+|+..+ ++.||||.++..... ..+.|.+|++++.+++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 567888999999999999998643 478999999765433 4578999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCc-----------ccccCHHH----------------------HHHHHhccccccCCCceec
Q 003402 598 LIYEYMVNKSLDVFLFDPTK-----------KHLLGWQL----------------------RVRIIDGIAQDQHMNPKIS 644 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~-----------~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~ 644 (823)
+||||+++++|.+++..... ...+.+.. +...+.+|+.+.++.+||+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEEC
Confidence 99999999999999864321 11122222 2223344555788899999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhcc
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
|||+++.+.............+++.|+|||++.+..++.++|||||||++|||++ |+.|+...... ...... .
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~----~ 238 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECI----T 238 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH----H
Confidence 9999987644332222333456889999999999999999999999999999999 98887433221 111111 1
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.+... ..+......+.+++..||+.||++||++.||+++|+
T Consensus 239 ~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 QGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred cCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11110 111223456788999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-30 Score=273.26 Aligned_cols=243 Identities=24% Similarity=0.320 Sum_probs=175.1
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHh--cCCCceeeEEeEEEeCC----eEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK--LQHRNLVRLLGCCIEQG----EKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~--l~H~Niv~l~g~~~~~~----~~~l 598 (823)
..+.+.+.||+|+||.||||.+.+ +.||||++.. +..+.|.+|-.+.+. ++|+||+++++.-.... +++|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhccC-ceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 456677999999999999999954 9999999964 455678888877664 68999999999987765 8999
Q ss_pred EEEcccCCCchhhccCCCc---------------------------ccccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 599 IYEYMVNKSLDVFLFDPTK---------------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~---------------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
|+||.++|+|.+||..... .+...+.||+....||+..+|+++-|+|||||..
T Consensus 286 Vt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred EeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 9999999999999853211 1234455555556666667889999999999999
Q ss_pred cCCCccccccccccccccccccccccCCC-CC-----chhhHHHHHHHHHHHHhCCCCCCCCCCCccch-----------
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGV-FS-----VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL----------- 714 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~-~s-----~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l----------- 714 (823)
+........+...+||.+|||||++.+.. +. .+.||||+|.|||||+++..-......+.+.+
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 88776667777789999999999986532 22 36899999999999999876543211111111
Q ss_pred hHHHHhhccCCccccccCcccccCC-CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 715 LGHAWSLCKNDRAHELMDPVLQNEV-SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 715 ~~~~~~~~~~~~~~~l~d~~l~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+..++.+.- .+-..|.+.... ...-+.-+.+.+..||..||+.|.|+.-|-+.+...
T Consensus 446 ~e~mq~~VV----~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 446 LEEMQELVV----RKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred HHHHHHHHH----hhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 111111111 111112221111 113355677889999999999999999998887665
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-30 Score=270.60 Aligned_cols=234 Identities=28% Similarity=0.395 Sum_probs=175.5
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 36789999999999999999998888899999986532 34578999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 604 VNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
++++|.+++...... |..+..|+...+.+|+.+.++.+||+|||+++........ ...
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~ 162 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-ARE 162 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCcee-ccC
Confidence 999999988543211 1112222333344555678889999999999876543221 122
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++..|+|||++....++.++|||||||++|||+| |+.|+...... ...... ...... ....
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~----~~~~~~---------~~~~ 227 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSAL----QRGYRM---------PRME 227 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHH----HcCCCC---------CCCC
Confidence 3456788999999998999999999999999999999 88887432111 111111 111000 0111
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.....+.+++.+|++.+|++||++.++.++|+.
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 228 NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 233567889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-30 Score=282.63 Aligned_cols=230 Identities=22% Similarity=0.335 Sum_probs=180.1
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC----Ch-hhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ----SG-QGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~----~~-~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~ 595 (823)
....|.+.+.||+|+||+|++|... ++..||||.+.+. .. ...+...+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4467899999999999999999764 5799999977653 11 23456678999999999 9999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccC-CCceeceeeceeecCCC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQH-MNPKISDFGMARMFGGD 655 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~-~~~KI~DFGla~~~~~~ 655 (823)
.++||||+.+|+|.+++...... |..+..||+.+.+||..|.+ +++||+|||++.....
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~- 173 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG- 173 (370)
T ss_pred EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC-
Confidence 99999999999999998762221 44556778888889999999 9999999999998741
Q ss_pred ccccccccccccccccccccccCCC-CC-chhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGV-FS-VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~-~s-~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+-||..... ..+... ...+
T Consensus 174 -~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~--~~l~~k----i~~~-------- 238 (370)
T KOG0583|consen 174 -EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV--PNLYRK----IRKG-------- 238 (370)
T ss_pred -CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--HHHHHH----HhcC--------
Confidence 122345689999999999999877 85 899999999999999999999965211 111111 1111
Q ss_pred ccccCCCHHH-HHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 734 VLQNEVSLPM-LVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 734 ~l~~~~~~~~-~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.. .++.-. ...+..++..|++.||.+|+++.+|+.
T Consensus 239 ~~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 239 EF--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred Cc--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 00 111111 567888999999999999999999994
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-30 Score=269.69 Aligned_cols=229 Identities=27% Similarity=0.399 Sum_probs=170.6
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|++.+.||+|+||.||++.+.++..+|+|.+... ....++|.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457888999999999999999988889999998643 2334679999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|+|.+++..... .+.+.....+ ..+|..+.++.+||+|||+++........ ...
T Consensus 83 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~~~ 159 (256)
T cd05114 83 NGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-SSS 159 (256)
T ss_pred CCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee-ccC
Confidence 9999998864321 2333333222 23444467888999999999876433222 112
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++..|+|||++....++.++||||||+++|||++ |+.|+..... ....... ..... ...+ .
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i---~~~~~---~~~~-------~ 224 (256)
T cd05114 160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMI---SRGFR---LYRP-------K 224 (256)
T ss_pred CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH---HCCCC---CCCC-------C
Confidence 2346678999999998899999999999999999999 8888743221 1111111 11110 0011 1
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
.....+.+++.+||+.+|++||+|.+++++|
T Consensus 225 ~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1234678999999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=278.32 Aligned_cols=243 Identities=21% Similarity=0.244 Sum_probs=174.4
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.++||+|+||.||+++.. ++..||+|.+... .....+++.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367999999999999999999876 4788999998754 23345679999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cc-cCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HL-LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~-l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|+++|+|.+++...... |. ..+.|++..+.+|+.+.++.+||+|||+++.+... ..
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 159 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MA 159 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc----cc
Confidence 99999999988543211 00 01223333444555678889999999999866432 22
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc-cC-C-c------------
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC-KN-D-R------------ 726 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~-~~-~-~------------ 726 (823)
....||+.|+|||++.+..++.++|||||||++|||++|+.|+...... .+........ .. . .
T Consensus 160 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
T cd06649 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPVVDGEEGEPHSISPRPRPPG 237 (331)
T ss_pred ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccccccccCCccccCccccccc
Confidence 3457999999999999999999999999999999999999998533221 1110000000 00 0 0
Q ss_pred ---------------cccccCcccc----cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 727 ---------------AHELMDPVLQ----NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 727 ---------------~~~l~d~~l~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
..++.+.... ..........+.+++.+||+.||++|||+.++++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000000000 000112345688999999999999999999998763
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-30 Score=278.89 Aligned_cols=233 Identities=21% Similarity=0.295 Sum_probs=186.1
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~ 597 (823)
...+|.+.+.||+|+|++|++|+.. .++++|||++.+. .....+-...|-.+|.+| .||.||+|+-.|.+...+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 3467899999999999999999865 4899999999764 223345567788899999 8999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 598 LIYEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+|+||++||+|.++|..... .|..++.||+.+++||+.|.+|++||+|||-|+.+......
T Consensus 151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 99999999999999864322 25678889999999999999999999999999998643221
Q ss_pred ---------ccc--ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc
Q 003402 659 ---------GNT--KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727 (823)
Q Consensus 659 ---------~~~--~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 727 (823)
... ..++||..|.+||++.++..+..+|+|+|||+||+|+.|++||...++ ......+
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--yliFqkI--------- 299 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE--YLIFQKI--------- 299 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--HHHHHHH---------
Confidence 112 458999999999999999999999999999999999999999854332 1111111
Q ss_pred ccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++ +.-+++....+.+.+++...|..||.+|+|..||-+.
T Consensus 300 ---~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 300 ---QA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ---HH--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 10 1112333344667788888999999999999998775
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=272.02 Aligned_cols=235 Identities=27% Similarity=0.404 Sum_probs=173.7
Q ss_pred cCcceeeeeccccceeEEeeee-----cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.++||+|+||+||+|.. ..++.||+|.+.... .+..++|.+|+.++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4578889999999999999974 245789999997533 3445789999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCc--------------c----------------------cccCHHHHHHHHhccccccCCCce
Q 003402 599 IYEYMVNKSLDVFLFDPTK--------------K----------------------HLLGWQLRVRIIDGIAQDQHMNPK 642 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~--------------~----------------------~~l~~~~r~~i~~~ia~d~~~~~K 642 (823)
||||+++++|.+++..... . |.....|+...+.+|+.+++..+|
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k 164 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK 164 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence 9999999999998842210 1 112233344444566668888999
Q ss_pred eceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhh
Q 003402 643 ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSL 721 (823)
Q Consensus 643 I~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~ 721 (823)
|+|||+++.+.............++..|+|||++.+..++.++|||||||++|||++ |..|+..... ..+....
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~--- 239 (283)
T cd05090 165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMV--- 239 (283)
T ss_pred eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH---
Confidence 999999987644332222334556788999999998899999999999999999999 8777643211 1111111
Q ss_pred ccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 722 ~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
...... ..+.....++.+++.+||+.||++||++.+|.++|..
T Consensus 240 -~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 -RKRQLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111100 1112234567889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=265.81 Aligned_cols=234 Identities=26% Similarity=0.381 Sum_probs=175.0
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
..++|++.++||+|+||.||+|...+++.||||.++... ...++|.+|+.++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 346688899999999999999998778899999987543 3457899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++.... ...+.+.....++ .+|..+.++.+||+|||+++.+...... .
T Consensus 83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-~ 160 (261)
T cd05068 83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE-A 160 (261)
T ss_pred ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-c
Confidence 99999999986533 1123343333332 3444467888999999999987533211 1
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....++..|+|||++....++.++||||||+++|||++ |+.|+..... ..+... ..... ....
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~----~~~~~---------~~~~ 225 (261)
T cd05068 161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--AEVLQQ----VDQGY---------RMPC 225 (261)
T ss_pred cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHH----HHcCC---------CCCC
Confidence 112234568999999999999999999999999999999 8877643211 111111 11110 0011
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
+......+.+++.+|++.+|++||++.++++.|+.
T Consensus 226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 12234678889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=269.68 Aligned_cols=237 Identities=24% Similarity=0.365 Sum_probs=173.2
Q ss_pred HhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
.+++|++.++||+|+||.||+|... .+..||||.+.... .....+|.+|+.+++.++||||+++++++.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4577999999999999999998753 24679999986432 2345679999999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCc-------ccccCHHHHHHH----------------------HhccccccCCCceecee
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK-------KHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDF 646 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DF 646 (823)
.++||||+++|+|.+++..... .....+.....+ +.||+.++++.+||+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df 163 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 163 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence 9999999999999998854211 111233333222 33445578889999999
Q ss_pred eceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCC
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
|+++.+.............+++.|||||.+.+..++.++|||||||++|||++ |..|+..... ...... ....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~~~~----~~~~ 237 (277)
T cd05062 164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRF----VMEG 237 (277)
T ss_pred CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH----HHcC
Confidence 99987644333222223456789999999999999999999999999999999 6777643221 111111 1111
Q ss_pred ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 726 ~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.... .+......+.+++.+||+.+|++||++.|++++|++
T Consensus 238 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 238 GLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111 111233567889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-30 Score=284.48 Aligned_cols=226 Identities=21% Similarity=0.274 Sum_probs=182.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.-|++.+.||+|+-|.|-.|++. .|+.+|||.+.+.. ......+.+||.+|+-|.|||+++|++++++..++|||.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 34788899999999999999875 59999999997652 222346789999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|.|.+++...... |.+.+.||+.+.+|++.|.+.++||+|||+|.+--.+. ..
T Consensus 92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk---lL 168 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK---LL 168 (786)
T ss_pred EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCc---cc
Confidence 999999999988543321 45666777777888888999999999999998754433 34
Q ss_pred ccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC--
Q 003402 662 KRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE-- 738 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~-- 738 (823)
.+.+|.+.|.|||++++.+| +.++||||.|||||.|+||+-||+..+ +..++...-++.
T Consensus 169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN------------------ir~LLlKV~~G~f~ 230 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN------------------IRVLLLKVQRGVFE 230 (786)
T ss_pred cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc------------------HHHHHHHHHcCccc
Confidence 56799999999999999999 589999999999999999999996321 111111111222
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.....++.+++..++..||+.|-|+.||+++
T Consensus 231 MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 231 MPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 233456678889999999999999999999986
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=271.46 Aligned_cols=237 Identities=25% Similarity=0.400 Sum_probs=178.4
Q ss_pred cCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.+|.+.+.||+|+||.||+|+.. ++..+|+|.+........+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45788899999999999999753 345799999987666666789999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCc-------------ccccCHHHHHHHH----------------------hccccccCCCcee
Q 003402 599 IYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRII----------------------DGIAQDQHMNPKI 643 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI 643 (823)
||||+++++|.+++..... ...+.+..+..++ .+|+.+.++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEE
Confidence 9999999999999854211 1224444443333 3344477889999
Q ss_pred ceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhc
Q 003402 644 SDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLC 722 (823)
Q Consensus 644 ~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~ 722 (823)
+|||+++...............|+..|||||.+.+..++.++|||||||++|||+| |+.|+...... ... ...
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~----~~~ 238 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--EVI----ECI 238 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH----HHH
Confidence 99999987644332222334567889999999999999999999999999999999 88887433211 111 111
Q ss_pred cCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 723 KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 723 ~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..+...+ ........+.+++.+||+.+|++||++.+|+++|+...
T Consensus 239 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 239 TQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred hCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 1111111 11123456889999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=293.17 Aligned_cols=230 Identities=17% Similarity=0.187 Sum_probs=172.8
Q ss_pred CcceeeeeccccceeEEeeeecC--CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~--~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.|.+.+.||+|+||.||++.... ++.||+|.+..........+.+|+.++++++|||||++++++.+.+..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 38889999999999999997543 5788999876555555567889999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCc-c----------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 604 VNKSLDVFLFDPTK-K----------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 604 ~~gsL~~~l~~~~~-~----------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
++|+|.++|..... . |..+..||+..+.||+.+.++.+||+|||+++.+........
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~ 227 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDV 227 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccc
Confidence 99999887743211 1 112223344445566678899999999999997754332223
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....+||++|||||++.+..++.++|||||||++|||++|+.|+..... ..+ ...... +.. + ..+
T Consensus 228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--~~~---~~~~~~-~~~----~-----~~~ 292 (478)
T PTZ00267 228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--REI---MQQVLY-GKY----D-----PFP 292 (478)
T ss_pred ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHH---HHHHHh-CCC----C-----CCC
Confidence 4456799999999999999999999999999999999999999743211 111 111110 000 0 111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
......+.+++..||+.||++||++.+++.
T Consensus 293 ~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 293 CPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 223456888999999999999999999864
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-30 Score=270.79 Aligned_cols=234 Identities=27% Similarity=0.439 Sum_probs=178.6
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+..+|++.++||+|+||.||+|...+++.||+|.+........+++.+|+.++++++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 44678889999999999999999988999999999876555567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++..... ..+.+.....+ +.+|+.++++.+||+|||+++.+.......
T Consensus 84 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~- 161 (261)
T cd05148 84 MEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS- 161 (261)
T ss_pred cccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc-
Confidence 999999999975332 12333333222 234444778899999999998764432221
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
....++..|+|||.+....++.++||||||+++|||++ |+.|+..... ....... ..+ .....
T Consensus 162 -~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~~~~~~~----~~~---------~~~~~ 225 (261)
T cd05148 162 -SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--HEVYDQI----TAG---------YRMPC 225 (261)
T ss_pred -cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHH----HhC---------CcCCC
Confidence 13456788999999999999999999999999999998 7888743221 1111111 010 00111
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
+......+.+++.+||+.||++|||+.++++.|++
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 226 PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 22334567899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-30 Score=271.36 Aligned_cols=258 Identities=23% Similarity=0.300 Sum_probs=183.7
Q ss_pred CCCCCCCCcccHHHHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHH--hcCCCce
Q 003402 506 KSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIA--KLQHRNL 583 (823)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~--~l~H~Ni 583 (823)
+.+++++|.+...++. .+..+.+.||+|.||.||+|++ .|+.||||++...+ .+.+.+|.++.. .|+|+||
T Consensus 195 SGSGSGlplLVQRTia---rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENI 267 (513)
T KOG2052|consen 195 SGSGSGLPLLVQRTIA---RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENI 267 (513)
T ss_pred CCCCCCchhHhHHhhh---heeEEEEEecCccccceeeccc-cCCceEEEEecccc---hhhhhhHHHHHHHHHhccchh
Confidence 4456788877666554 5688999999999999999999 67899999997543 356777777665 4699999
Q ss_pred eeEEeEEEeCC----eEEEEEEcccCCCchhhccCCCcc--------------------------cccCHHHHHHHHhcc
Q 003402 584 VRLLGCCIEQG----EKILIYEYMVNKSLDVFLFDPTKK--------------------------HLLGWQLRVRIIDGI 633 (823)
Q Consensus 584 v~l~g~~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~--------------------------~~l~~~~r~~i~~~i 633 (823)
+.+++.-..++ ++|||++|.++|||.+||...... ......||+.+..||
T Consensus 268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNI 347 (513)
T KOG2052|consen 268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 347 (513)
T ss_pred hhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccE
Confidence 99999876553 789999999999999999653321 224456667777777
Q ss_pred ccccCCCceeceeeceeecCCC--ccccccccccccccccccccccCCC----C-C-chhhHHHHHHHHHHHHhCC----
Q 003402 634 AQDQHMNPKISDFGMARMFGGD--ELQGNTKRIVGTYGYMSPEYALEGV----F-S-VKSDVFSFGVLMLEILSSK---- 701 (823)
Q Consensus 634 a~d~~~~~KI~DFGla~~~~~~--~~~~~~~~~~Gt~~YmAPE~~~~~~----~-s-~ksDVwSfGvvl~Elltg~---- 701 (823)
+...++.+-|+|+|||.....+ ......+..+||.+|||||++.+.. | + ..+||||||.|+||++.+.
T Consensus 348 LVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~gg 427 (513)
T KOG2052|consen 348 LVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGG 427 (513)
T ss_pred EEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCC
Confidence 7788999999999999876544 2233445679999999999986543 2 1 3599999999999998543
Q ss_pred ------CCCCCCCCCccchhHHHHhhccCCccccccCccccc-CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 702 ------KNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN-EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 702 ------~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.||......+.++.. +... -..+-+.|.+.+ -...+.+..+.++|..||..+|..|-|+--|-+.|..
T Consensus 428 i~eey~~Pyyd~Vp~DPs~ee-MrkV----VCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~ 502 (513)
T KOG2052|consen 428 IVEEYQLPYYDVVPSDPSFEE-MRKV----VCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAK 502 (513)
T ss_pred EehhhcCCcccCCCCCCCHHH-Hhcc----eeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHH
Confidence 233211111111111 0000 011112222222 2345678889999999999999999999988888766
Q ss_pred c
Q 003402 775 E 775 (823)
Q Consensus 775 ~ 775 (823)
.
T Consensus 503 l 503 (513)
T KOG2052|consen 503 L 503 (513)
T ss_pred H
Confidence 5
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=278.97 Aligned_cols=234 Identities=20% Similarity=0.304 Sum_probs=175.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+|+..+ ++.||||+++... ....+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 368899999999999999999864 8899999997532 234567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|.+++...... |..++.|++..+.||+.+.++.+||+|||+++.... ..
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~ 155 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YA 155 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----cc
Confidence 999999999998543211 222333444455666678899999999999986533 22
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||++.+..++.++|||||||++|||++|+.|+...... ........ +.. .+..+.. .....
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~i~~-~~~----~~~~~~~-~~~~~ 227 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN--ETWENLKY-WKE----TLQRPVY-DDPRF 227 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH--HHHHHHHh-ccc----cccCCCC-Ccccc
Confidence 3467999999999999999999999999999999999999998543221 11111100 000 0000100 00012
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++..||+.+|++||++.+++++
T Consensus 228 ~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 228 NLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 235567889999999999999999999875
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=277.89 Aligned_cols=235 Identities=23% Similarity=0.364 Sum_probs=172.0
Q ss_pred cCcceeeeeccccceeEEeeeecC-Cc----EEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.+|++.+.||+|+||.||+|++.. ++ .||||.++... ....++|.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 468899999999999999998643 33 48999987543 34457899999999999999999999999865 5679
Q ss_pred EEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|+||+++|+|.+++...... |..+..|++..+.||+.+.++.+||+|||+++.+......
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 165 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE 165 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcc
Confidence 99999999999988653211 1122333444455666678889999999999987544322
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.......++..|||||++.+..++.++|||||||++|||++ |+.|+...... .+ ......+. ..
T Consensus 166 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~----~~~~~~~~---------~~ 230 (316)
T cd05108 166 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EI----SSILEKGE---------RL 230 (316)
T ss_pred eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HH----HHHHhCCC---------CC
Confidence 22222345778999999999999999999999999999998 88887532211 11 11111110 00
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+......+.+++..||+.+|++||++.+++..|...
T Consensus 231 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 231 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11112334678899999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-30 Score=283.21 Aligned_cols=226 Identities=25% Similarity=0.377 Sum_probs=178.8
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCch
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLD 609 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 609 (823)
-+||+|.||+||-|+..+ ...+|||.+..+..+..+.+..||.+.++++|.|||+++|.|.++++.-+.||.+|+|||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 479999999999999876 4579999998887777888999999999999999999999999999999999999999999
Q ss_pred hhccCCCc----------------------ccccCHHHHHHHHhcccc-ccCCCceeceeeceeecCCCccccccccccc
Q 003402 610 VFLFDPTK----------------------KHLLGWQLRVRIIDGIAQ-DQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 610 ~~l~~~~~----------------------~~~l~~~~r~~i~~~ia~-d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
++|...-. .|...+.||+.+-.|++. .-.+.+||+|||.+|.+.+ ....+.++.|
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TETFTG 738 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTETFTG 738 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc--CCcccccccc
Confidence 99854211 022333444444455544 3467799999999998743 4567788999
Q ss_pred cccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHH
Q 003402 667 TYGYMSPEYALEGV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744 (823)
Q Consensus 667 t~~YmAPE~~~~~~--~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~ 744 (823)
|..|||||++-.++ |+.++|||||||++.||.||++||.........+. +-+ + -....+.+.+..
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF-------kVG-m-----yKvHP~iPeels 805 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF-------KVG-M-----YKVHPPIPEELS 805 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh-------hhc-c-----eecCCCCcHHHH
Confidence 99999999998775 89999999999999999999999854433211111 000 0 012345666778
Q ss_pred HHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 745 VRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 745 ~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.++..++++|+..||.+||+++++++.
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhccC
Confidence 899999999999999999999998873
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-30 Score=286.21 Aligned_cols=239 Identities=24% Similarity=0.354 Sum_probs=173.3
Q ss_pred HhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQG 594 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~ 594 (823)
..++|.+.++||+|+||.||+|++. .++.||||+++... ....+.+.+|++++.++. |||||+++++|...+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 4456788899999999999999863 24689999997543 233457999999999997 999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCcc--------------------------------------------------------
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKK-------------------------------------------------------- 618 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~-------------------------------------------------------- 618 (823)
..++|+||+++|+|.++++.....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 999999999999999988542110
Q ss_pred ---------------------------------------cccCH----------------------HHHHHHHhcccccc
Q 003402 619 ---------------------------------------HLLGW----------------------QLRVRIIDGIAQDQ 637 (823)
Q Consensus 619 ---------------------------------------~~l~~----------------------~~r~~i~~~ia~d~ 637 (823)
..+.+ .|+...+.+|+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE 274 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC
Confidence 01111 12222334455567
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~ 716 (823)
+..+||+|||+++.+.............|++.|||||.+....++.++|||||||++|||++ |+.|+....... .+
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~-~~-- 351 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE-QF-- 351 (401)
T ss_pred CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH-HH--
Confidence 88899999999987643322122223467889999999999999999999999999999998 788864322111 00
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+. ....+......+.+++..||+.+|++||++++|++.|+..
T Consensus 352 --~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 352 --YNAIKRGY---------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred --HHHHHcCC---------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11111110 0011222345788899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=267.81 Aligned_cols=234 Identities=27% Similarity=0.399 Sum_probs=173.5
Q ss_pred cCcceeeeeccccceeEEeeeecC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.+.||+|+||.||+|++.. ...||||.++... ....++|.+|+.++.+++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568889999999999999998753 3579999987543 33456799999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++++|.+++..... .+.+.....+ +.+|+.++++.+||+|||+++.+.....
T Consensus 84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 84 TEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 999999999999864321 2333333222 2344457788999999999998752222
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
........+++.|+|||.+.+..++.++||||||+++|||++ |..|+..... ..+.... .... .
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~----~~~~---------~ 226 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--QDVIKAV----EDGY---------R 226 (266)
T ss_pred ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--HHHHHHH----HcCC---------C
Confidence 212223345788999999999999999999999999999998 8888643211 1111111 1100 0
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+......+.+++..||+.+|++||++.+|+++|+..
T Consensus 227 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 227 LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011122345678999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=270.17 Aligned_cols=230 Identities=22% Similarity=0.275 Sum_probs=168.9
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.|+..+.||+|+||.||++... +++.||||.+.... ......+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3677899999999999999864 58999999986432 2234568899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++|+|..++..... ..+.+. |++..+.||+.++++.+||+|||+++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET-- 157 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe--
Confidence 9999999887753221 112222 222333455557888999999999987643321
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....||+.|||||++.+..++.++|||||||++|||++|+.|+....... ........... . ....
T Consensus 158 -~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~--------~--~~~~ 224 (285)
T cd05631 158 -VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVDRRVKE--------D--QEEY 224 (285)
T ss_pred -ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHHHHhhc--------c--cccC
Confidence 223579999999999999999999999999999999999999986432211 00000000000 0 0112
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCC-----HHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPT-----MSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~ 771 (823)
+......+.+++..||+.||++||+ ++++++.
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 2223456788999999999999997 7777763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=269.31 Aligned_cols=249 Identities=25% Similarity=0.295 Sum_probs=173.5
Q ss_pred cceeeeeccccceeEEeeee-----cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKIL 598 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~-----~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~l 598 (823)
|++.+.||+|+||+||++.. .+++.||+|.+.... ....+.|.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37789999999999988653 347789999987543 23457899999999999999999999998764 46889
Q ss_pred EEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc-c
Q 003402 599 IYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ-G 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~-~ 659 (823)
||||+++++|.+++...... |...+.|+...+.+|..+.+..+||+|||+++.+...... .
T Consensus 86 v~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (283)
T cd05080 86 IMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 165 (283)
T ss_pred EecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhc
Confidence 99999999999988542211 1112223333344555578889999999999876433211 1
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......++..|+|||.+.+..++.++||||||+++|||++|+.|+........................+.++.......
T Consensus 166 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (283)
T cd05080 166 VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPC 245 (283)
T ss_pred cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCC
Confidence 11223456779999999989999999999999999999999998754332211111111100011111112222212222
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+......+.+++..||+.+|++||++++|+++|+..
T Consensus 246 ~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 246 PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 333456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-30 Score=291.75 Aligned_cols=234 Identities=24% Similarity=0.326 Sum_probs=181.7
Q ss_pred cceeeeeccccceeEEeeeec-CC----cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NG----QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~----~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++..++||+|+||+||||.+- .| .+||||.+... ..+..++|+.|+-.|++++||||+||+|+|.... ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 344589999999999999763 33 47999998754 4456789999999999999999999999998776 88999
Q ss_pred EcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+|||.|.|.+|++..... +.....||...++|++...--.+||.|||+|+.+..+..+-.
T Consensus 777 q~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~ 856 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS 856 (1177)
T ss_pred HhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence 999999999998653221 122344566667777777888899999999999987765544
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....-.+.|||-|.++...|+.++|||||||.+||++| |.+|+.....+. +.++++...+-..
T Consensus 857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e---------------I~dlle~geRLsq 921 (1177)
T KOG1025|consen 857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE---------------IPDLLEKGERLSQ 921 (1177)
T ss_pred ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH---------------hhHHHhccccCCC
Confidence 444455789999999999999999999999999999999 888865433221 1122222122234
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
++.+...+..+++.||..|+..||+++++...+.+..
T Consensus 922 PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 922 PPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred CCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 5566778888999999999999999999988776543
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-30 Score=279.63 Aligned_cols=226 Identities=19% Similarity=0.255 Sum_probs=172.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||+|+... ++.||||.+.... ....+.+.+|+.++.+++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 568899999999999999998764 7899999986532 234567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|.+++...... |..++.|++..+.||+.+.++.+||+|||+++.+....
T Consensus 98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----- 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT----- 172 (329)
T ss_pred cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-----
Confidence 999999999888643221 22233344445566777899999999999998764322
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||++.+..++.++|||||||++|||++|+.|+.... ..... .....+.. ..+.
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--~~~~~----~~i~~~~~----------~~p~ 236 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT--PFRIY----EKILAGRL----------KFPN 236 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC--HHHHH----HHHhcCCc----------CCCC
Confidence 23579999999999999999999999999999999999999984321 11111 11111110 1111
Q ss_pred HHHHHHHHHHHHccccCcCCCCC-----HHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPT-----MSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~ 771 (823)
....++.+++..||+.||.+||+ +.+++..
T Consensus 237 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 237 WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 12346778999999999999997 6777654
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=271.71 Aligned_cols=236 Identities=25% Similarity=0.400 Sum_probs=175.7
Q ss_pred cCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.+|.+.+.||+|+||+||++... ++..+|+|.+........+.+.+|+.++.+++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 56888899999999999999752 245699999987666667789999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCC----------cccccCHHHHH----------------------HHHhccccccCCCceecee
Q 003402 599 IYEYMVNKSLDVFLFDPT----------KKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDF 646 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~----------~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DF 646 (823)
||||+++++|.+++.... ....+.+.... ..+.+|+.++++.+||+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccC
Confidence 999999999999885321 11123333332 2334455578889999999
Q ss_pred eceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCC
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
|+++.+.............+++.|+|||.+.+..++.++|||||||++|||++ |+.|+...... .... ....+
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--~~~~----~i~~~ 238 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIE----CITQG 238 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH----HHHcC
Confidence 99987644332222333456789999999999999999999999999999999 78776432211 1111 11111
Q ss_pred ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 726 ~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.... .+......+.+++..||+.||.+||++.+|+..|+..
T Consensus 239 ~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 239 RVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred CcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 1110 0112234688999999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=267.51 Aligned_cols=233 Identities=25% Similarity=0.397 Sum_probs=173.8
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.+|.+.++||+|+||.||+|...+ ++.||+|.++.. ....+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 457788999999999999998764 789999998754 334578999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++..... ..+.+..+..+ +.+|..++++.+||+|||+++........ ..
T Consensus 85 ~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~-~~ 162 (263)
T cd05052 85 TYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AH 162 (263)
T ss_pred CCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee-cc
Confidence 99999998854322 22344433332 23344467888999999999876543221 11
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....++..|+|||.+.+..++.++|||||||++|||++ |..|+..... ... +...... .....+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~----~~~~~~~---------~~~~~~ 227 (263)
T cd05052 163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQV----YELLEKG---------YRMERP 227 (263)
T ss_pred CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHH----HHHHHCC---------CCCCCC
Confidence 22334678999999999999999999999999999998 8888643211 111 1111111 011112
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+.+++.+||+.+|++||++.+++++|+..
T Consensus 228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 22345688899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-30 Score=278.10 Aligned_cols=230 Identities=21% Similarity=0.309 Sum_probs=182.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe-EEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE-KILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~-~~lV~ 600 (823)
++|...+++|+|+||.++..+.+ +++.+++|.+.-. +....+...+|+.++++++|||||.+++.+.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56788899999999999998765 4778999988643 33444567899999999999999999999999988 99999
Q ss_pred EcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 601 EYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||+++|+|.+.|...... |.....||+.++.||....+..+||.|||+||.+..+. .
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~--~ 161 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED--S 161 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch--h
Confidence 999999999988654311 22344566777778888888889999999999987654 2
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
...+.+||+.||.||.+.+.+|..|+||||+||++|||++-+++|...+.. .-+.+.. ...+ ...
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~-----~Li~ki~-----~~~~-----~Pl 226 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS-----ELILKIN-----RGLY-----SPL 226 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH-----HHHHHHh-----hccC-----CCC
Confidence 344689999999999999999999999999999999999999998543221 1111111 1111 233
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+......+..++..|++.+|+.||++.+++.+
T Consensus 227 p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 44566778889999999999999999999875
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=269.33 Aligned_cols=241 Identities=24% Similarity=0.371 Sum_probs=170.9
Q ss_pred cCcceeeeeccccceeEEeeeecC---------------CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN---------------GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLG 588 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~---------------~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g 588 (823)
++|++.++||+|+||.||+++... ...||||.++.. .....+.|.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 568889999999999999987532 235899998754 3334567999999999999999999999
Q ss_pred EEEeCCeEEEEEEcccCCCchhhccCCCcc---------cccCHHHHHH----------------------HHhcccccc
Q 003402 589 CCIEQGEKILIYEYMVNKSLDVFLFDPTKK---------HLLGWQLRVR----------------------IIDGIAQDQ 637 (823)
Q Consensus 589 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~---------~~l~~~~r~~----------------------i~~~ia~d~ 637 (823)
++...+..++||||+++++|.+++...... ..+.+..... .+.+|..++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~ 164 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN 164 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence 999999999999999999999988542210 1123333322 233444477
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhC--CCCCCCCCCCccchh
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSS--KKNTGVYNTDSFNLL 715 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg--~~p~~~~~~~~~~l~ 715 (823)
++.+||+|||+++.+.............++..|+|||++..+.++.++|||||||++|||+++ ..|+..... ...+
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~--~~~~ 242 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD--EQVI 242 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh--HHHH
Confidence 888999999999876433322223334567899999999999999999999999999999984 445433221 1111
Q ss_pred HHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 716 ~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.............. ....+......+.+++.+||+.||++||+|.+|++.|+
T Consensus 243 ~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 243 ENTGEFFRNQGRQI------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHhhhhccccc------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11111111100000 00111223457889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=267.87 Aligned_cols=243 Identities=21% Similarity=0.267 Sum_probs=170.6
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.+.||+|+||.||+++... ++.||||+++... ....+.+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 368899999999999999999864 7899999987532 2345678899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
|++++.+..+....... |..+..|+...+.+|..+.++.+||+|||+++.+..... ....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 159 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-ANYT 159 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-cccc
Confidence 99998776654322110 111222233334455567888999999999987643221 1223
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh------------ccCCccccc
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL------------CKNDRAHEL 730 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~------------~~~~~~~~l 730 (823)
...||+.|+|||++.+..++.++|||||||++|||++|+.|+....... .+. ..... .........
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 160 EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLF-TIQKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred ccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHH-HHHHhhCCCCHHHHHhhhccchhccc
Confidence 4679999999999999999999999999999999999999885432211 000 00000 000000001
Q ss_pred cCccccc------CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 731 MDPVLQN------EVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 731 ~d~~l~~------~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+.... .........+.+++..||+.||++|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0011000 011123456889999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-29 Score=267.56 Aligned_cols=242 Identities=26% Similarity=0.377 Sum_probs=175.6
Q ss_pred hcCcceeeeeccccceeEEeeeecC-----------------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceee
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-----------------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVR 585 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-----------------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~ 585 (823)
.++|++.++||+|+||.||+++..+ +..||+|.+.... ....++|.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3568889999999999999987643 2468999987543 345678999999999999999999
Q ss_pred EEeEEEeCCeEEEEEEcccCCCchhhccCCCc--------ccccCH----------------------HHHHHHHhcccc
Q 003402 586 LLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--------KHLLGW----------------------QLRVRIIDGIAQ 635 (823)
Q Consensus 586 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~--------~~~l~~----------------------~~r~~i~~~ia~ 635 (823)
+++++..++..++|+||+++++|..++..... ...+.+ .|+...+.+|+.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili 163 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence 99999999999999999999999998864321 011222 233334445556
Q ss_pred ccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCCCccc
Q 003402 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFN 713 (823)
Q Consensus 636 d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt--g~~p~~~~~~~~~~ 713 (823)
+.++.+||+|||+++.+.............+|+.|||||.+....++.++|||||||++|||++ +..|+.... ...
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~ 241 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT--DQQ 241 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--hHH
Confidence 7888999999999987654433333344567889999999998899999999999999999998 555553221 112
Q ss_pred hhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 714 LLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 714 l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.+................ ..+.....++.+++.+||+.||++||++.+|++.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 242 VIENAGHFFRDDGRQIYL------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHhccccccccccC------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 222222111111111111 111223457899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=291.55 Aligned_cols=234 Identities=21% Similarity=0.258 Sum_probs=174.4
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-----
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG----- 594 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~----- 594 (823)
..++|.+.++||+|+||+||+++.. +++.||||.+... .......+.+|+.++..++|+|+++++..+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4468999999999999999999864 5899999998643 3344567899999999999999999988775432
Q ss_pred ---eEEEEEEcccCCCchhhccCCCcc-----------------------cccCHHHHHHHHhccccccCCCceeceeec
Q 003402 595 ---EKILIYEYMVNKSLDVFLFDPTKK-----------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGM 648 (823)
Q Consensus 595 ---~~~lV~Ey~~~gsL~~~l~~~~~~-----------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGl 648 (823)
..++||||+++|+|.++|...... |..+..||+..+.||+.+.++.+||+|||+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 368999999999999988542111 112233444445666678899999999999
Q ss_pred eeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 649 ARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 649 a~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
++.+.............||+.|||||++.+..++.++|||||||++|||++|+.|+..... ........ .+.
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-----~~~~~~~~-~~~-- 261 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-----EEVMHKTL-AGR-- 261 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHh-cCC--
Confidence 9876543323333457899999999999999999999999999999999999999853211 11111111 110
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+ ..+......+.+++..||+.||++||++.+++.+
T Consensus 262 --~~-----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 262 --YD-----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred --CC-----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 01 1122334568889999999999999999999864
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=269.62 Aligned_cols=233 Identities=24% Similarity=0.309 Sum_probs=168.4
Q ss_pred cCcceeeeeccccceeEEeeeecC-Cc----EEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.+.||+|+||+||+|.+.. ++ .||+|.+.... ....+++..|+..+++++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 467788999999999999998743 43 48888886443 234567888999999999999999999875 455788
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+||+++|+|.+++..... .+.+... .....||+.++++.+||+|||+++.+....
T Consensus 86 i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 9999999999999864321 1233222 222344555788899999999998765433
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.........|+..|||||++.++.++.++|||||||++|||++ |+.|+...... .+ ......+.. ...+
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~----~~~~~~~~~--~~~~-- 233 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EV----PDLLEKGER--LAQP-- 233 (279)
T ss_pred cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HH----HHHHHCCCc--CCCC--
Confidence 2222334567889999999999999999999999999999998 88887432211 11 111111110 0001
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+.+++..||+.||++||++.|+++.|+..
T Consensus 234 -----~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 234 -----QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred -----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11233567788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=268.32 Aligned_cols=235 Identities=26% Similarity=0.405 Sum_probs=174.0
Q ss_pred CcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
+|++.+.||+|+||.||+|+... ...+|+|.+.... ....+++.+|+.++++++||||+++++.+.+.+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 46778999999999999997532 3579999887543 3345689999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCc---------------------c----------------------cccCHHHHHHHHhcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTK---------------------K----------------------HLLGWQLRVRIIDGIAQ 635 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~---------------------~----------------------~~l~~~~r~~i~~~ia~ 635 (823)
|+||+++|+|.+++..... . |.....|+...+.+|+.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill 160 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence 9999999999998753210 0 11223344444556666
Q ss_pred ccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccch
Q 003402 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNL 714 (823)
Q Consensus 636 d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l 714 (823)
++++.+||+|||+++.+.............++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... .
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~- 237 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE--R- 237 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH--H-
Confidence 7888999999999987644332222233456788999999988899999999999999999999 88887432211 1
Q ss_pred hHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 715 LGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 715 ~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+...... .....+......+.+++..||+.+|++||++.++++.|++.
T Consensus 238 ---~~~~~~~~---------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 238 ---LFNLLKTG---------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred ---HHHHHhCC---------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 11111111 01111222345688999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=262.72 Aligned_cols=230 Identities=29% Similarity=0.400 Sum_probs=171.1
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|.+.+.||+|+||+||+|+..++..||||.+.... ...++|.+|+.++.+++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4578889999999999999988777789999987532 335789999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|+|.+++..... .+.+.....++ .+|+.+.++.+||+|||+++......... ..
T Consensus 83 ~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~-~~ 159 (256)
T cd05113 83 NGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS-SV 159 (256)
T ss_pred CCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceee-cC
Confidence 9999999864322 23333333322 23334678889999999998764433211 11
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++..|+|||++....++.++|||||||++|||++ |+.|+...... ..... . ..+... ..+.
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~---~-~~~~~~---------~~~~ 224 (256)
T cd05113 160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEK---V-SQGLRL---------YRPH 224 (256)
T ss_pred CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHH---H-hcCCCC---------CCCC
Confidence 2346678999999998899999999999999999999 88887533221 11111 1 111000 0111
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.....+.+++..||+.+|++||++.+|+..|+
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 225 LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 22457888999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=278.82 Aligned_cols=239 Identities=27% Similarity=0.403 Sum_probs=172.7
Q ss_pred hcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC-C
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ-G 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~-~ 594 (823)
.++|++.++||+|+||.||+|... .++.||+|+++... ....+.+.+|+.++.++ +|+||++++++|... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357889999999999999999642 24789999987532 23346788999999999 899999999988754 5
Q ss_pred eEEEEEEcccCCCchhhccCCCc---------------------------------------------------------
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK--------------------------------------------------------- 617 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 617 (823)
..++++||+++++|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 78899999999999988753211
Q ss_pred -ccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccccccccccccccccc
Q 003402 618 -KHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674 (823)
Q Consensus 618 -~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE 674 (823)
...+.|.....+ +.+|+.+.++.+||+|||+++.+.............++..|||||
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 245 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 245 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence 012334333332 234444778889999999998765433322333456778999999
Q ss_pred cccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHH
Q 003402 675 YALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALL 753 (823)
Q Consensus 675 ~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~ 753 (823)
++.+..++.++|||||||+||||++ |+.|+.....+. .+. .....+.. ...+......+.+++.+
T Consensus 246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~----~~~~~~~~---------~~~~~~~~~~~~~l~~~ 311 (337)
T cd05054 246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFC----RRLKEGTR---------MRAPEYATPEIYSIMLD 311 (337)
T ss_pred HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHH----HHHhccCC---------CCCCccCCHHHHHHHHH
Confidence 9999999999999999999999998 888875322111 110 11111100 01112234568899999
Q ss_pred ccccCcCCCCCHHHHHHHHhccc
Q 003402 754 CVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 754 Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
||+.+|++||++.||+++|+..+
T Consensus 312 cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 312 CWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HccCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=266.68 Aligned_cols=238 Identities=24% Similarity=0.360 Sum_probs=176.2
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-----CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE-QGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-~~~ 595 (823)
..++|++.+.||+|+||.||+|...+ +..||+|++... .....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45678899999999999999998765 688999998754 23445679999999999999999999999877 578
Q ss_pred EEEEEEcccCCCchhhccCCCcc-----cccCHHHHHHHHh----------------------ccccccCCCceeceeec
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK-----HLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGM 648 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~-----~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGl 648 (823)
.++++||+++++|..++...... ..+.+.....++. +|+.++++.+||+|||+
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence 89999999999999998543221 2344544444333 33336778899999999
Q ss_pred eeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCcc
Q 003402 649 ARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRA 727 (823)
Q Consensus 649 a~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~ 727 (823)
++.+.............++..|+|||++.+..++.++|||||||++||+++ |+.|+.... ...+..+. ..+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~----~~~~- 236 (280)
T cd05043 164 SRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAAYL----KDGY- 236 (280)
T ss_pred cccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHHHH----HcCC-
Confidence 987644333222223456788999999998899999999999999999999 888874321 11111111 1110
Q ss_pred ccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 728 ~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.. .........+.+++.+||+.||++||++.+|+++|+..
T Consensus 237 -~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 237 -RL-------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred -CC-------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 00 01112235678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=274.03 Aligned_cols=226 Identities=19% Similarity=0.215 Sum_probs=170.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+++.. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999876 48899999986432 234467889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|.+++...... |..+..|+...+.+|+.+.++.+||+|||+++.+... .
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-----~ 155 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-----T 155 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-----c
Confidence 999999999988543211 1222333334445566688899999999999876432 2
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|+|||++.+..++.++|||||||++|||++|+.|+..... ..+.. .. ..+. ...+.
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--~~~~~---~i-~~~~----------~~~~~ 219 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--FGIYE---KI-LAGK----------LEFPR 219 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHH---HH-HhCC----------cCCCc
Confidence 235799999999999998999999999999999999999999853221 11111 11 0110 01112
Q ss_pred HHHHHHHHHHHHccccCcCCCCC-----HHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPT-----MSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~ 771 (823)
.....+.+++..||+.||.+||+ +.++++.
T Consensus 220 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 220 HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 22446788999999999999995 8887764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=266.36 Aligned_cols=234 Identities=22% Similarity=0.370 Sum_probs=170.6
Q ss_pred cceeeeeccccceeEEeeeecC----CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe-----
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE----- 595 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~----- 595 (823)
|.+.+.||+|+||.||+|.... +..||||+++.. .....+++.+|+..++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998743 367999998753 23445789999999999999999999999877654
Q ss_pred -EEEEEEcccCCCchhhccCCC---cccccCH----------------------HHHHHHHhccccccCCCceeceeece
Q 003402 596 -KILIYEYMVNKSLDVFLFDPT---KKHLLGW----------------------QLRVRIIDGIAQDQHMNPKISDFGMA 649 (823)
Q Consensus 596 -~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~----------------------~~r~~i~~~ia~d~~~~~KI~DFGla 649 (823)
.++|+||+++|+|..++.... ....+.+ .|+.....+|+.++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 799999999999998884421 1112222 23333345555678889999999999
Q ss_pred eecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
+...............++..|+|||.+....++.++|||||||++|||++ |..|+..... ..+.... ..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~~~----~~~~~~ 234 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYDYL----RHGNRL 234 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----HcCCCC
Confidence 87654433222223345778999999988899999999999999999999 7777643221 1111111 111100
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+......+.+++..||+.||.+||++.+|++.|+..
T Consensus 235 ---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 235 ---------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11223455788899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=272.02 Aligned_cols=236 Identities=20% Similarity=0.287 Sum_probs=182.0
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
+...++|+++..||+|+||.||+++-++ |..+|+|+|++.. ....+..+.|-.+|....+|.||+|+-.|.+.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 4456889999999999999999998765 8999999998753 23456788899999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCC--
Q 003402 597 ILIYEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGD-- 655 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~-- 655 (823)
||||||.|+|++..+|..... .|.+++.||+.++.|++.|..|++||+||||++-+...
T Consensus 217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 999999999999888754321 26788899999999999999999999999999643210
Q ss_pred --------------------ccc-----cc------------------cccccccccccccccccCCCCCchhhHHHHHH
Q 003402 656 --------------------ELQ-----GN------------------TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692 (823)
Q Consensus 656 --------------------~~~-----~~------------------~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGv 692 (823)
+.. .. ....+|||-|||||++.+..|+..+|.||+||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ 376 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC 376 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence 000 00 11257999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCc--cchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCC---HHH
Q 003402 693 LMLEILSSKKNTGVYNTDS--FNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT---MSD 767 (823)
Q Consensus 693 vl~Elltg~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt---~~e 767 (823)
|+|||+.|-+||....... ..+..|...+ .-....+...+..+++..|+. ||+.|-. +.|
T Consensus 377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l--------------~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~E 441 (550)
T KOG0605|consen 377 IMYEMLVGYPPFCSETPQETYRKIVNWRETL--------------KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEE 441 (550)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc--------------cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence 9999999999986543321 1222221111 111112233677788888888 9999965 556
Q ss_pred HHHH
Q 003402 768 VVSM 771 (823)
Q Consensus 768 vl~~ 771 (823)
|-++
T Consensus 442 IK~H 445 (550)
T KOG0605|consen 442 IKKH 445 (550)
T ss_pred HhcC
Confidence 6543
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=276.56 Aligned_cols=233 Identities=21% Similarity=0.279 Sum_probs=169.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|+..++||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 45667789999999999999875 58999999986542 33456799999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc---------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccc
Q 003402 603 MVNKSLDVFLFDPTK---------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~---------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
+++|+|......... .|..+..|++....||+.+.++.+||+|||+++.+.... .......||
T Consensus 154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt 231 (353)
T PLN00034 154 MDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--DPCNSSVGT 231 (353)
T ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc--ccccccccC
Confidence 999998764322110 122334455555667777889999999999998764322 112345799
Q ss_pred ccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 668 YGYMSPEYALE-----GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 668 ~~YmAPE~~~~-----~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
..|||||.+.. ...+.++|||||||++|||++|+.||....... ............ .......
T Consensus 232 ~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~~----------~~~~~~~ 299 (353)
T PLN00034 232 IAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLMCAICMSQ----------PPEAPAT 299 (353)
T ss_pred ccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhccC----------CCCCCCc
Confidence 99999998743 223569999999999999999999986322111 111110000000 0111223
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....+.+++..||+.||++||++.||++.
T Consensus 300 ~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 300 ASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 34568889999999999999999999885
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=273.68 Aligned_cols=179 Identities=24% Similarity=0.283 Sum_probs=143.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.++||+|+||.||++... ++..+|+|.+... .....+.+.+|++++++++||||+++++++.++++.++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999876 4788999988754 23345679999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cc-cCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HL-LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~-l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|+++|+|.+++...... |. ....|+...+.||..+.++.+||+|||+++.+... ..
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----~~ 159 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MA 159 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----cc
Confidence 99999999988543211 00 01222333344555577888999999999765322 12
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
....||..|+|||++.+..++.++|||||||++|||++|+.|+..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 335799999999999998999999999999999999999999854
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=262.26 Aligned_cols=226 Identities=23% Similarity=0.298 Sum_probs=164.8
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
++||+|+||.||+|+.. +++.||+|.+.... ......|.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 47999999999999875 58899999886432 34456799999999999999999999999999999999999999999
Q ss_pred hhhccCCCcccccCH----------------------HHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 609 DVFLFDPTKKHLLGW----------------------QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 609 ~~~l~~~~~~~~l~~----------------------~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
.+++..... .+.+ .|+...+.+|..+.++.+||+|||+++...............+
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 81 LTFLRTEGP--RLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred HHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence 999854221 1222 2223333455557788899999999986543221111111233
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
+..|+|||.+.++.++.++|||||||++|||++ |..|+...... ... ...... .....+.....
T Consensus 159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~----~~~~~~---------~~~~~~~~~~~ 223 (252)
T cd05084 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTR----EAIEQG---------VRLPCPELCPD 223 (252)
T ss_pred ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHH----HHHHcC---------CCCCCcccCCH
Confidence 567999999999999999999999999999998 77776432211 110 110000 01111222345
Q ss_pred HHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 746 RYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.+.+++..|++.+|++||++.+|.++|+
T Consensus 224 ~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 224 AVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 7888999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=266.84 Aligned_cols=234 Identities=26% Similarity=0.385 Sum_probs=173.2
Q ss_pred cCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|...++||+|+||.||++... ++..+|+|.+........+.|.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45777899999999999999642 356899999887666667789999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCc------------ccccCHHH----------------------HHHHHhccccccCCCceec
Q 003402 599 IYEYMVNKSLDVFLFDPTK------------KHLLGWQL----------------------RVRIIDGIAQDQHMNPKIS 644 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~------------~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~ 644 (823)
|+||+++++|.+++..... ...+.+.. +...+.+|+.++++.+||+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~ 164 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEEC
Confidence 9999999999998864321 01123332 2333345555788899999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhcc
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.|+...... ... ... .
T Consensus 165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~---~~~-~ 238 (280)
T cd05092 165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--EAI---ECI-T 238 (280)
T ss_pred CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--HHH---HHH-H
Confidence 9999987644332222333456789999999999999999999999999999998 78776422111 111 001 0
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.+.. ...+......+.+++..||+.||++||++.+|++.|+
T Consensus 239 ~~~~---------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 239 QGRE---------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred cCcc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 0000 0111123456788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=264.48 Aligned_cols=236 Identities=27% Similarity=0.406 Sum_probs=171.9
Q ss_pred HhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
.+++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 34678999999999999999998754 5679999886443 3344679999999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCc----ccccCHHHHHHHHh----------------------ccccccC---CCceecee
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK----KHLLGWQLRVRIID----------------------GIAQDQH---MNPKISDF 646 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~----~~~l~~~~r~~i~~----------------------~ia~d~~---~~~KI~DF 646 (823)
.++||||+++++|.+++..... ...+.+.....++. +|+.+.+ ..+||+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 9999999999999999854321 11344444433332 3333333 35899999
Q ss_pred eceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCC
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
|+++.+.............++..|||||++.+..++.++|||||||++|||++ |+.|+.....+ .+... .....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~---~~~~~ 238 (277)
T cd05036 164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEF---VTGGG 238 (277)
T ss_pred ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH---HHcCC
Confidence 99987744332222223345678999999999999999999999999999997 88887532211 11111 10111
Q ss_pred ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 726 ~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
+ ...+......+.+++..|++.+|++||++.+|++.|+
T Consensus 239 ~----------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 239 R----------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred c----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 0 1112223457888999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=254.53 Aligned_cols=215 Identities=24% Similarity=0.329 Sum_probs=173.6
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG---QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|+..+.||.|+||.|.+.+.+. |..+|+|+|++... ...+...+|..+|+.+.||.+|++++.|.+.+.++|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 568888999999999999998764 78999999986532 33456788999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|.|..+|+...+ .|..++..|+.+++||+.|.++.+||.|||+||.+.. .+
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-----rT 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-----RT 198 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC-----cE
Confidence 99999999999975332 1445666777788999999999999999999998743 35
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc--CC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN--EV 739 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~--~~ 739 (823)
-+.+|||.|+|||.+....|..++|-|||||++|||+.|.+||..... . ++.+.++.. .+
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~----------------~iY~KI~~~~v~f 260 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--I----------------QIYEKILEGKVKF 260 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--H----------------HHHHHHHhCcccC
Confidence 678999999999999999999999999999999999999999864332 1 111112222 12
Q ss_pred CHHHHHHHHHHHHHccccCcCCC
Q 003402 740 SLPMLVRYINVALLCVQENAEDR 762 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~R 762 (823)
+.-....+.+++...+|.|-.+|
T Consensus 261 P~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 261 PSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred CcccCHHHHHHHHHHHhhhhHhh
Confidence 33334456667777788888777
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=268.12 Aligned_cols=234 Identities=28% Similarity=0.409 Sum_probs=171.4
Q ss_pred CcceeeeeccccceeEEeeeecC------CcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.|.+.++||+|+||.||+|+..+ ++.||||+++.... ...+.|.+|+.++.+++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 46677999999999999998643 47899999975433 234678999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCC-------------cccccCH----------------------HHHHHHHhccccccCCCcee
Q 003402 599 IYEYMVNKSLDVFLFDPT-------------KKHLLGW----------------------QLRVRIIDGIAQDQHMNPKI 643 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~----------------------~~r~~i~~~ia~d~~~~~KI 643 (823)
++||+++++|..++.... ....+.+ .|++..+.||+.++++.+||
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl 165 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKI 165 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEe
Confidence 999999999999874211 0111222 23333444555577888999
Q ss_pred ceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhc
Q 003402 644 SDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLC 722 (823)
Q Consensus 644 ~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~ 722 (823)
+|||+++.+.............+++.|||||.+..+.++.++|||||||++|||++ |..|+..... ..+. ...
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~----~~i 239 (283)
T cd05091 166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVI----EMI 239 (283)
T ss_pred cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--HHHH----HHH
Confidence 99999987644332222334556889999999999999999999999999999998 6666643211 1111 111
Q ss_pred cCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 723 KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 723 ~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
...... ..+......+.+++..||+.+|++||++.+|++.|+.
T Consensus 240 ~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111111 1122344567889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=267.36 Aligned_cols=246 Identities=23% Similarity=0.351 Sum_probs=171.4
Q ss_pred cCcceeeeeccccceeEEeeeec-----CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~~ 597 (823)
++|++.+.||+|+||.||++... +++.||||.+........+.|.+|++++.+++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 56888899999999999999753 478999999987666667889999999999999999999998754 34688
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+|+||+++|+|.+++..... .+.+.... ....+|..+.++.+||+|||+++.+...
T Consensus 84 lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred EEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 99999999999999854321 12333322 2234445577889999999999876443
Q ss_pred ccc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc-C---Cccccc
Q 003402 656 ELQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK-N---DRAHEL 730 (823)
Q Consensus 656 ~~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~-~---~~~~~l 730 (823)
... .......++..|+|||++.+..++.++|||||||++|||++|..+....... +......... . ....+.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHHHHHH
Confidence 211 1111223455699999999999999999999999999999987664322110 0000000000 0 000001
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+...............+.+++.+||+.+|++||||.+|+++|+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 239 LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 111101111223345788999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-29 Score=268.63 Aligned_cols=237 Identities=26% Similarity=0.366 Sum_probs=174.8
Q ss_pred cCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~ 596 (823)
++|.+.+.||+|+||.||++... .+..||||.++... ....+.+.+|+.+++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 56888999999999999999742 24579999987542 33456799999999999 799999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
++||||+++|+|.+++...... |..+..|+...+.+|+.+.+..+||+|||+++.+...
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 194 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMND 194 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence 9999999999999998643211 1122334444455566678888999999999876543
Q ss_pred ccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
..........++..|+|||.+.+..++.++|||||||++|||++ |+.|+....... .+ ......+.
T Consensus 195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~----~~~~~~~~-------- 261 (302)
T cd05055 195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KF----YKLIKEGY-------- 261 (302)
T ss_pred CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HH----HHHHHcCC--------
Confidence 22212223456788999999999999999999999999999998 888864332211 11 11111110
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+.....++.+++..|++.+|++||++.||++.|+..
T Consensus 262 -~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 -RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0011112245688899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-30 Score=272.39 Aligned_cols=238 Identities=23% Similarity=0.340 Sum_probs=177.3
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHH--HHHHHHHHHhcC-CCceeeEEeEEEeCC-eEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKE--FKNEMMLIAKLQ-HRNLVRLLGCCIEQG-EKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~--f~~Ev~~l~~l~-H~Niv~l~g~~~~~~-~~~l 598 (823)
-++|.+.++||.|.||.||+|+-. .+..||||++++.-.. +++ =++|++.|++|. |||||+|..++.+.+ .+++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 367888999999999999999754 5889999999865332 344 367999999998 999999999999988 9999
Q ss_pred EEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|||||+. +|.+++.++.+. |..++-||+.+.+||+......+||+||||||.+....
T Consensus 88 VfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp-- 164 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP-- 164 (538)
T ss_pred eHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCC--
Confidence 9999954 888888765331 44566677777778877778899999999999875433
Q ss_pred ccccccccccccccccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc---CCc---ccc--
Q 003402 659 GNTKRIVGTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK---NDR---AHE-- 729 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~-~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~---~~~---~~~-- 729 (823)
..+..+-|..|.|||++. .+-|+.+.|||++|||++||.+-++-|....+ +...++.+. ... ..+
T Consensus 165 -PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE-----~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 165 -PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE-----IDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred -CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH-----HHHHHHHHHHhCCCccccchhHH
Confidence 233468899999999875 67799999999999999999999887643221 122222211 000 000
Q ss_pred -------ccCcccc----cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 730 -------LMDPVLQ----NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 730 -------l~d~~l~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.-|... ...-.....++++++..|++.||.+|||+.|.+++
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0001100 01112267788999999999999999999999886
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=261.82 Aligned_cols=231 Identities=27% Similarity=0.392 Sum_probs=170.3
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.+|++.+.||+|+||.||+|...++..+|+|.+.... ...++|.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 3477789999999999999998777789999986532 234678999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccc
Q 003402 605 NKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRI 664 (823)
Q Consensus 605 ~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~ 664 (823)
+++|.+++...... |..+..|+.....+|..++++.+||+|||+++......... ....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~-~~~~ 161 (256)
T cd05059 83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS-SQGT 161 (256)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccc-cCCC
Confidence 99999988643211 11122233333445555788899999999998764332211 1122
Q ss_pred cccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHH
Q 003402 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743 (823)
Q Consensus 665 ~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~ 743 (823)
.++..|+|||.+....++.++||||||+++|||++ |+.|+...... ..... . ... .. ...+...
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~---~-~~~-----~~----~~~~~~~ 226 (256)
T cd05059 162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVES---V-SAG-----YR----LYRPKLA 226 (256)
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHH---H-HcC-----Cc----CCCCCCC
Confidence 34568999999999999999999999999999999 77777532211 11111 1 111 00 0111224
Q ss_pred HHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 744 LVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 744 ~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
..++.+++.+||+.+|++||+|.+++++|
T Consensus 227 ~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 227 PTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 55788999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=265.54 Aligned_cols=241 Identities=25% Similarity=0.376 Sum_probs=171.0
Q ss_pred cCcceeeeeccccceeEEeeeec-----------------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-----------------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-----------------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l 586 (823)
++|++.++||+|+||.||+++.. +...||+|.+... .....++|.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56889999999999999998532 2346999999754 33445789999999999999999999
Q ss_pred EeEEEeCCeEEEEEEcccCCCchhhccCCCcc--------cccCHH----------------------HHHHHHhccccc
Q 003402 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK--------HLLGWQ----------------------LRVRIIDGIAQD 636 (823)
Q Consensus 587 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~--------~~l~~~----------------------~r~~i~~~ia~d 636 (823)
++++...+..++||||+++++|..++...... ..+.+. |+...+.+|+.+
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~ 164 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG 164 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc
Confidence 99999999999999999999999988643211 112222 222233444556
Q ss_pred cCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCCCccch
Q 003402 637 QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNL 714 (823)
Q Consensus 637 ~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt--g~~p~~~~~~~~~~l 714 (823)
.++.+||+|||+++.+..........+..+++.|||||....+.++.++|||||||++|||++ |..|+..... ...
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~--~~~ 242 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD--EQV 242 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh--HHH
Confidence 788899999999987644332222233455788999999988899999999999999999998 5566543221 111
Q ss_pred hHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 715 LGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 715 ~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
................ ...+..+...+.+++.+||+.||++||+|.+|++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 243 IENTGEFFRDQGRQVY------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHhhcccccc------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111111111100000 0111223467889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=261.92 Aligned_cols=236 Identities=25% Similarity=0.413 Sum_probs=173.0
Q ss_pred cCcceeeeeccccceeEEeeeecC-C---cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-G---QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~---~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|+..+.||+|+||.||+|+... + ..+|+|.+... .....++|.+|++++++++|||++++.+++.+.+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 467888999999999999998753 3 37999998754 233456799999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 600 YEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|||+++++|..++...... |..+..|+...+.+|..+.++.+||+|||+++.........
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 164 (268)
T cd05063 85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT 164 (268)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccc
Confidence 9999999999998643211 11222333334455666788899999999998764332111
Q ss_pred c-cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 660 N-TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 660 ~-~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
. ......++.|+|||++....++.++|||||||++|||++ |+.|+...... .+.. .. .... ..
T Consensus 165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~~---~i-~~~~---------~~ 229 (268)
T cd05063 165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVMK---AI-NDGF---------RL 229 (268)
T ss_pred eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHH---HH-hcCC---------CC
Confidence 1 111234567999999998899999999999999999998 99887432211 1111 11 1110 01
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.........+.+++.+||+.+|++||++.+|++.|++.
T Consensus 230 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11122345678999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=261.35 Aligned_cols=237 Identities=23% Similarity=0.348 Sum_probs=174.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+|+.. +++.||||.+... .....+.|.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999875 5889999987542 2334567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCc-ccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 601 EYMVNKSLDVFLFDPTK-KHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~-~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||+++|+|..++..... ...+..... ...+.+|..+.++.+||+|||+++.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 99999999888743111 111222211 1222344447788899999999987654321
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......|++.|||||.+.+..++.++||||||+++|||++|+.|+.....+...+. ... .... .+ .
T Consensus 162 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~---~~~-~~~~-----~~---~ 227 (267)
T cd08228 162 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC---QKI-EQCD-----YP---P 227 (267)
T ss_pred --HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH---HHH-hcCC-----CC---C
Confidence 12235789999999999988899999999999999999999999743222111111 111 1100 00 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.........+.+++.+||+.+|++||++.+|++.|++.
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11122345688899999999999999999999999765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=276.48 Aligned_cols=227 Identities=19% Similarity=0.250 Sum_probs=172.2
Q ss_pred hcCcceeeeeccccceeEEeeeecC--CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~--~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|++.++||+|+||.||+|.... +..||+|.+... .....+.+.+|+.++..++|||||++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3578999999999999999998654 368999998643 22345678899999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||||+++|+|..++...... |..+..||+..+.||+.+.++.+||+|||+++.+...
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~---- 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR---- 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC----
Confidence 99999999999988643221 2223334444556677788999999999999876432
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....||+.|||||++.+..++.++|||||||++|||++|+.|+..... .... .... .+. . ..
T Consensus 185 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~~~~---~~i~-~~~--------~--~~ 247 (340)
T PTZ00426 185 -TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP--LLIY---QKIL-EGI--------I--YF 247 (340)
T ss_pred -cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH--HHHH---HHHh-cCC--------C--CC
Confidence 2346799999999999998999999999999999999999999853221 1111 1111 100 0 01
Q ss_pred CHHHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
+......+.+++..|++.||++|+ +++++++.
T Consensus 248 p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 248 PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 112234567899999999999995 89988775
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=273.67 Aligned_cols=222 Identities=18% Similarity=0.190 Sum_probs=164.2
Q ss_pred eccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
||+|+||.||+++..+ ++.||+|.++.. .....+.+.+|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 7999999999998764 789999998643 234456788999999999999999999999999999999999999999
Q ss_pred hhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccccc
Q 003402 609 DVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG 669 (823)
Q Consensus 609 ~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~ 669 (823)
..++...... |..++.||+..+.||..+.++.+||+|||+++...... .......||+.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~ 158 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGTPE 158 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--CccccccCCcc
Confidence 9888543211 12233344444556666889999999999998643222 12334679999
Q ss_pred ccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHH
Q 003402 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYIN 749 (823)
Q Consensus 670 YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~ 749 (823)
|||||++.+..++.++|||||||++|||++|+.|+..... .......... . ...+......+.+
T Consensus 159 y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~~~~~-~----------~~~~~~~~~~~~~ 222 (312)
T cd05585 159 YLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRKILQE-P----------LRFPDGFDRDAKD 222 (312)
T ss_pred cCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcC-C----------CCCCCcCCHHHHH
Confidence 9999999999999999999999999999999999853211 1111111110 0 0112223456778
Q ss_pred HHHHccccCcCCCCCHHHHHHHH
Q 003402 750 VALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 750 l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
++..||+.||++||++.++.+.|
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHH
Confidence 99999999999998654444444
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=264.07 Aligned_cols=228 Identities=21% Similarity=0.326 Sum_probs=181.8
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
-+|++.+.||+|.||+|-++.. ..|+.||||.+++. +.+.+-.+++||++|+.|+||||++++.+|+..+...|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4578889999999999999975 67999999999764 3455567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||..+|.|.+|+...... |.....||+.+..||+.|.+.++||+||||+.++..+. ..
T Consensus 133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k---fL 209 (668)
T KOG0611|consen 133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK---FL 209 (668)
T ss_pred EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc---HH
Confidence 999999999999654321 33455677888899999999999999999998775443 34
Q ss_pred ccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.+++|++-|.+||.+.+.+| ++.+|-||+||+||-|+.|..||+...- ..++. .. ..+ ...+
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--k~lvr---QI-s~G---aYrE-------- 272 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--KRLVR---QI-SRG---AYRE-------- 272 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--HHHHH---Hh-hcc---cccC--------
Confidence 56899999999999999998 5899999999999999999999864321 11111 11 111 1111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
++......-++.|++..||++|.|+.+|...-
T Consensus 273 P~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 273 PETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred CCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 11223455688899999999999999998753
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=266.44 Aligned_cols=236 Identities=24% Similarity=0.378 Sum_probs=172.2
Q ss_pred hcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
.++|++.+.||+|+||.||+++.. ++..||+|.+.... ....++|.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467888999999999999999863 36789999987542 34456799999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCc-------------------ccccCHHH----------------------HHHHHhcccc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTK-------------------KHLLGWQL----------------------RVRIIDGIAQ 635 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~----------------------r~~i~~~ia~ 635 (823)
++|+||+++|+|.+++..... ...+.+.. +.....+|..
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~ 163 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV 163 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe
Confidence 999999999999999853211 01122222 2222334445
Q ss_pred ccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccch
Q 003402 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNL 714 (823)
Q Consensus 636 d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l 714 (823)
+.++.+||+|||+++.+.............+++.|+|||.+....++.++|||||||++|||++ |..|+..... ...
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~--~~~ 241 (288)
T cd05050 164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH--EEV 241 (288)
T ss_pred cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 7888999999999987644332222223345778999999998999999999999999999998 7767632211 111
Q ss_pred hHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 715 LGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 715 ~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.. ....+... ..+.....++.+++.+||+.+|++||++.|+++.|+.
T Consensus 242 ~~----~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 242 IY----YVRDGNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HH----HHhcCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11 11111110 0111234568889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=261.43 Aligned_cols=228 Identities=26% Similarity=0.327 Sum_probs=164.6
Q ss_pred eeccccceeEEeeeec---CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 532 KLGEGGFGPVYKGRLL---NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 532 ~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
+||+|+||.||+|.+. +++.+|+|+++... ....++|.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 6999999999999753 46889999986442 334578999999999999999999999885 45678999999999
Q ss_pred CchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc-cccccccc
Q 003402 607 SLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ-GNTKRIVG 666 (823)
Q Consensus 607 sL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~-~~~~~~~G 666 (823)
+|.+++...... |.....|+...+.+|+.+.++.+||+|||+++.+...... .......+
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 160 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW 160 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence 999988543210 1111222233334455577888999999999876543321 11122345
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
++.|||||.+....++.++|||||||++|||++ |+.|+...... .+... ...+.. ...+.....
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~----i~~~~~---------~~~~~~~~~ 225 (257)
T cd05116 161 PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQM----IESGER---------MECPQRCPP 225 (257)
T ss_pred CccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH----HHCCCC---------CCCCCCCCH
Confidence 689999999988889999999999999999998 88887533211 11111 111110 111223445
Q ss_pred HHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 746 RYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+.+++.+||+.||++||++.+|+++|++.
T Consensus 226 ~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 226 EMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 678899999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=266.96 Aligned_cols=238 Identities=25% Similarity=0.374 Sum_probs=173.1
Q ss_pred HhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
..++|++.++||+|+||.||+|...+ +..||+|.+.... ......+.+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45779999999999999999997542 4589999986443 2334578899999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCc-------ccccCHH----------------------HHHHHHhccccccCCCceecee
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK-------KHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDF 646 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DF 646 (823)
.++||||+++|+|.+++..... .....+. |+.....+|+.++++.+||+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Df 163 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF 163 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcC
Confidence 9999999999999999854211 1111221 1222234455578889999999
Q ss_pred eceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCC
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
|+++.+.............++..|||||.+.++.++.++|||||||++|||++ |+.|+..... ...... ....+
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--~~~~~~---~~~~~ 238 (288)
T cd05061 164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKF---VMDGG 238 (288)
T ss_pred CccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH---HHcCC
Confidence 99987644332222233456788999999999999999999999999999999 6767642211 111111 11111
Q ss_pred ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 726 ~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.. ..+......+.+++.+||+.||++||++.++++.|+..
T Consensus 239 -~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 239 -YL---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -CC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 00 01112245788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=246.24 Aligned_cols=256 Identities=24% Similarity=0.336 Sum_probs=182.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hh-HHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QG-LKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~-~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.+|...++||+|.||.||+|+.. +|+.||||+++.... ++ ....++||+.|+.++|+||+.|++++-..+..-||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 35677799999999999999864 589999999975422 22 3467899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 602 YMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+. +|...|++.... |.....||+.+..|++...++.+||+|||||+.++..... .
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~--~ 158 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI--Q 158 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc--c
Confidence 9975 777777654321 3444567888888999999999999999999998654322 2
Q ss_pred ccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc---CCc---cccccCc-
Q 003402 662 KRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK---NDR---AHELMDP- 733 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~---~~~---~~~l~d~- 733 (823)
...+-|..|.|||.+.+. .|+..+||||.|||+.||+-|.+-+. ...+ .+-+....+... ++. +.++-|-
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp-G~sD-idQL~~If~~LGTP~~~~WP~~~~lpdY~ 236 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP-GDSD-IDQLSKIFRALGTPTPDQWPEMTSLPDYV 236 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC-CCch-HHHHHHHHHHcCCCCcccCccccccccHH
Confidence 223679999999999876 49999999999999999998776442 2222 222222221111 111 1111110
Q ss_pred -------ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCCCCCCCCc
Q 003402 734 -------VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPF 787 (823)
Q Consensus 734 -------~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~p~~p~~ 787 (823)
...+..-.......++++..++..||.+|.+++|.+++=- ....|.|..|.-
T Consensus 237 ~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y--f~~~P~pt~~~~ 295 (318)
T KOG0659|consen 237 KIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPY--FKSLPLPTPPSK 295 (318)
T ss_pred HHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchh--hhcCCCCCChhh
Confidence 0011122234455689999999999999999999998632 234565555543
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=265.82 Aligned_cols=239 Identities=26% Similarity=0.403 Sum_probs=175.5
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ 593 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~ 593 (823)
...++|++.+.||+|+||.||++.... ...+|+|.+... ..+...++.+|+.++.++ +|+||+++++++.++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 344678899999999999999998642 368999998753 334456799999999999 799999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCC-------------cccccCHHHHH----------------------HHHhccccccC
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPT-------------KKHLLGWQLRV----------------------RIIDGIAQDQH 638 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~r~----------------------~i~~~ia~d~~ 638 (823)
+..++||||+++|+|..++.... ....+.+.... ....+|..+.+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED 168 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence 99999999999999999985321 11123333222 22334445778
Q ss_pred CCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHH
Q 003402 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGH 717 (823)
Q Consensus 639 ~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~ 717 (823)
+.+||+|||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |..|+...... .+
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~--- 243 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--EL--- 243 (293)
T ss_pred CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--HH---
Confidence 8999999999987654433222333456788999999999999999999999999999998 87776432111 11
Q ss_pred HHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 718 AWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 718 ~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+. ....+......+.+++..||+.||++||||.++++.|+..
T Consensus 244 -~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 244 -FKLLKEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred -HHHHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 11111111 0112223345788999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=274.82 Aligned_cols=223 Identities=18% Similarity=0.210 Sum_probs=167.2
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
+.||+|+||.||+++.. +++.||||.++... ......+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999875 58899999997532 233457889999999999999999999999999999999999999
Q ss_pred CchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccc
Q 003402 607 SLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 607 sL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
+|..++...... |..+..|++..+.||+.+.++.+||+|||+++...... .......||
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt 158 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGT 158 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--CcccceecC
Confidence 998887543211 22233344445566677889999999999998542221 123346799
Q ss_pred ccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHH
Q 003402 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747 (823)
Q Consensus 668 ~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~ 747 (823)
+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+... . .... ...+......+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~---~-~~~~----------~~~p~~~~~~~ 222 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFEL---I-LMEE----------IRFPRTLSPEA 222 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--HHHHHH---H-HcCC----------CCCCCCCCHHH
Confidence 999999999999999999999999999999999999853211 111111 0 0000 01122234567
Q ss_pred HHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 748 INVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 748 ~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
.+++..||+.||++|| ++.++++.
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 8899999999999999 78888763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=262.41 Aligned_cols=235 Identities=24% Similarity=0.383 Sum_probs=174.6
Q ss_pred hcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
.++|.+.+.||+|+||.||+|.... +..||+|.+.... .....+|.+|+.++..++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4678889999999999999998643 3689999987543 23456799999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc-------cccCHHHHHHH----------------------HhccccccCCCceeceee
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------HLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFG 647 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFG 647 (823)
++||||+++|+|..++...... ..+.+.....+ +.+|..+.++.+||+|||
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcc
Confidence 9999999999999998542211 11233333222 234444788899999999
Q ss_pred ceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 648 MARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 648 la~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
+++.+.............+|..|+|||.+.++.++.++|||||||++||+++ |+.|+..... ..+.... ..+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~----~~~~ 238 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVLKFV----IDGG 238 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHHHHH----hcCC
Confidence 9987654433333344567889999999998899999999999999999998 8887643221 1111111 1111
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.. ..+......+.+++..||+.+|++|||+.++++.|+
T Consensus 239 ~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 239 HL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11 111223557889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=273.91 Aligned_cols=225 Identities=28% Similarity=0.435 Sum_probs=178.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEecc---CChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSN---QSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~---~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+-|+..+.||.|+||.||-++.. +.+.||||+++- .+.+.+..++.||+.|.+++|||+|.+.||+......||||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 34667789999999999999864 578999999873 34556788999999999999999999999999999999999
Q ss_pred EcccCCCchhhcc---CC-----------------CcccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 601 EYMVNKSLDVFLF---DP-----------------TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 601 Ey~~~gsL~~~l~---~~-----------------~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
|||-+ |-.++|. .+ ...|.+...||+.+|-||+..+.+.+||+|||.|.+...
T Consensus 106 EYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P------ 178 (948)
T KOG0577|consen 106 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP------ 178 (948)
T ss_pred HHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc------
Confidence 99954 5444441 11 112556778999999999999999999999999986533
Q ss_pred ccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 661 TKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
..+++|||.|||||++. .+.|+-|+||||+||++.||.-+++|..-. +.....+....++ .|.+.
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM-----NAMSALYHIAQNe------sPtLq- 246 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALYHIAQNE------SPTLQ- 246 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc-----hHHHHHHHHHhcC------CCCCC-
Confidence 34589999999999986 688999999999999999999999986432 2222223322222 12222
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+....+..++-.|++.-|.+|||..+++.
T Consensus 247 --s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 247 --SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred --CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 3456778899999999999999999998876
|
|
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=258.19 Aligned_cols=225 Identities=23% Similarity=0.312 Sum_probs=166.7
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCch
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLD 609 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 609 (823)
++||+|+||.||+|...+++.||+|.+..... .....|.+|+.++++++||||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 47999999999999988889999999876533 33457999999999999999999999999999999999999999999
Q ss_pred hhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccccccccccc
Q 003402 610 VFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 610 ~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
.++..... .+.+..... .+.+|+.+.++.+||+|||+++....... .......++
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~ 157 (250)
T cd05085 81 SFLRKKKD--ELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQIP 157 (250)
T ss_pred HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCCc
Confidence 98854321 123333222 23344457788899999999986543322 112223456
Q ss_pred ccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 668 ~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
+.|+|||++..+.++.++||||||+++||+++ |..|+...... .... .. .... ....+......
T Consensus 158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~---~~-~~~~---------~~~~~~~~~~~ 222 (250)
T cd05085 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QARE---QV-EKGY---------RMSCPQKCPDD 222 (250)
T ss_pred ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHH---HH-HcCC---------CCCCCCCCCHH
Confidence 78999999998999999999999999999999 88887432111 1111 11 1110 01112234467
Q ss_pred HHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 747 YINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
+.+++..|++.+|++||++.++++.|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=261.78 Aligned_cols=233 Identities=22% Similarity=0.385 Sum_probs=168.0
Q ss_pred ceeeeeccccceeEEeeeecCC-c--EEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------CeE
Q 003402 528 SIQSKLGEGGFGPVYKGRLLNG-Q--EVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------GEK 596 (823)
Q Consensus 528 ~~~~~LG~G~fG~Vy~g~~~~~-~--~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~~~ 596 (823)
.+.++||+|+||.||+|...+. . .||||.++.. .....+.|.+|++++++++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4568999999999999987653 2 6999988653 344567899999999999999999999988643 256
Q ss_pred EEEEEcccCCCchhhccCCC---ccccc----------------------CHHHHHHHHhccccccCCCceeceeeceee
Q 003402 597 ILIYEYMVNKSLDVFLFDPT---KKHLL----------------------GWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~---~~~~l----------------------~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
++|+||+++|+|..++.... ....+ +..|++..+.||+.++++.+||+|||+++.
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 89999999999988873211 11112 233444445566668889999999999987
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
+.............+++.|+|||++.+..++.++||||||+++|||++ |+.|+..... ..+. .....+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~----~~~~~~~~~~- 234 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIY----DYLRQGNRLK- 234 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHH----HHHHcCCCCC-
Confidence 654332222223356778999999999999999999999999999999 6777643211 1111 1111111100
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+......+.+++..||+.||++||++.+|++.|+..
T Consensus 235 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 235 --------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1112344578999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=260.29 Aligned_cols=232 Identities=29% Similarity=0.398 Sum_probs=172.4
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|++.++||+|+||.||+|...+++.||+|.+.... ...++|.+|+.++++++|+||+++++++ ..+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcC
Confidence 46788899999999999999998889999999997543 3456899999999999999999999986 456789999999
Q ss_pred cCCCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++..... ..+.+.... ..+.+|..++++.++|+|||+++......... .
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~-~ 160 (260)
T cd05067 83 ENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA-R 160 (260)
T ss_pred CCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc-c
Confidence 99999998854321 122333222 23344455788899999999998765332211 1
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....++..|+|||++....++.++||||||+++|||++ |+.|+..... ..... . ...+. ....+
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~---~-~~~~~---------~~~~~ 225 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--PEVIQ---N-LERGY---------RMPRP 225 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--HHHHH---H-HHcCC---------CCCCC
Confidence 23456789999999998899999999999999999999 8888753221 11111 1 11110 00111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.....++.+++.+||+.+|++||++++++..|+.
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2234568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=266.28 Aligned_cols=249 Identities=24% Similarity=0.351 Sum_probs=174.4
Q ss_pred cCcceeeeeccccceeEEeeeec-----CCcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~ 596 (823)
+.|++.+.||+|+||.||++++. .++.||||.++..... ..++|.+|++++++++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777799999999999999864 3678999999765432 46789999999999999999999999987 5689
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++||||+++++|.+++..... .+.+.... ..+.+|..+.++.+||+|||++..+..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 999999999999999864331 23333222 233445557888999999999987753
Q ss_pred Ccc-ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 655 DEL-QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 655 ~~~-~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... ........++..|+|||.+.+..++.++||||||+++|||++|+.|+........................+.+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 321 1112223456779999999989999999999999999999999988643322211100000000000000011111
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+.....++.+++.+||+.+|++||+|.||+++|+..
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 242 GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111111222346788999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=263.46 Aligned_cols=241 Identities=20% Similarity=0.232 Sum_probs=169.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999875 47899999986432 22345788999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 603 MVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++ +|.+++...... |..++.|++..+.||+.+.++.+||+|||+++....... ...
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--~~~ 161 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK--TYS 161 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc--ccc
Confidence 984 888877432211 222334444455666668899999999999986543221 123
Q ss_pred cccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc--------C----Ccccc
Q 003402 663 RIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK--------N----DRAHE 729 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~--------~----~~~~~ 729 (823)
...||+.|||||.+.+ ..++.++||||+||++|||++|+.|+...... ..+........ . .....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 162 NEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK--EELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred CceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 3578999999998875 56899999999999999999999997533211 11111111100 0 00001
Q ss_pred ccCcccccC----CCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 730 LMDPVLQNE----VSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 730 l~d~~l~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
...+..... ..........+++..|++.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 111110000 00112345788999999999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=261.73 Aligned_cols=232 Identities=23% Similarity=0.327 Sum_probs=162.3
Q ss_pred eeeccccceeEEeeeecC---CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 531 SKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~---~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
+.||+|+||.||+|...+ +..+|+|.++... ......|.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 369999999999998654 4579999987543 234457999999999999999999999999999999999999999
Q ss_pred CchhhccCCCc--ccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 607 SLDVFLFDPTK--KHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 607 sL~~~l~~~~~--~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|.+++..... .....+.. +.....+|+.+.+..+||+|||+++............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD 160 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence 99999864221 11122222 2222334445778889999999998654433322233
Q ss_pred cccccccccccccccCC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 663 RIVGTYGYMSPEYALEG-------VFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~-------~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
...|+..|||||++... .++.++||||||+++|||++ |+.|+...... ....... . .....+.++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~~~~~---~-~~~~~~~~~~ 234 (269)
T cd05087 161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE--QVLTYTV---R-EQQLKLPKPR 234 (269)
T ss_pred CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHh---h-cccCCCCCCc
Confidence 45678899999988642 35889999999999999996 98887543221 1111110 1 1111122222
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
+. ......+.+++..|| .+|++|||+.+|+..|+
T Consensus 235 ~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11 122345677888999 58999999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-29 Score=291.52 Aligned_cols=242 Identities=28% Similarity=0.379 Sum_probs=183.6
Q ss_pred HHHHhcCcceeeeeccccceeEEeeeecC--------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeE
Q 003402 520 VTAATENFSIQSKLGEGGFGPVYKGRLLN--------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGC 589 (823)
Q Consensus 520 ~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~--------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~ 589 (823)
.+...+++.+.+.||+|.||.|++|.... ...||||.++... ....+.+..|+++|..+ +|+|||.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 34455666777899999999999997531 3579999998543 34567899999999998 69999999999
Q ss_pred EEeCCeEEEEEEcccCCCchhhccCCC-----------------cc------------------cccCHHHHHHHHhccc
Q 003402 590 CIEQGEKILIYEYMVNKSLDVFLFDPT-----------------KK------------------HLLGWQLRVRIIDGIA 634 (823)
Q Consensus 590 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------~~------------------~~l~~~~r~~i~~~ia 634 (823)
|.+++..++|+||+.+|+|..+|+... .. ......||+..++||+
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVL 450 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence 999999999999999999999997654 00 1123346677777788
Q ss_pred cccCCCceeceeeceeecCCCccccccc-cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 003402 635 QDQHMNPKISDFGMARMFGGDELQGNTK-RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSF 712 (823)
Q Consensus 635 ~d~~~~~KI~DFGla~~~~~~~~~~~~~-~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~ 712 (823)
...+..+||+||||||............ ...-+.+|||||.+....|+.|||||||||+||||+| |..|+..... ..
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~ 529 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TE 529 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HH
Confidence 8889999999999999876655443221 1113567999999999999999999999999999999 6666532110 11
Q ss_pred chhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 713 NLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 713 ~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+ +...+.+ .+.+.+..+..++..+|+.||+.+|++||++.++++.++..
T Consensus 530 ~l----~~~l~~G---------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 530 EL----LEFLKEG---------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HH----HHHHhcC---------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 11 1122222 12233445567888999999999999999999999999884
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=260.25 Aligned_cols=231 Identities=28% Similarity=0.429 Sum_probs=170.6
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|++.++||+|+||.||+|...++..||+|.++.... ..+.|.+|+.++++++|+|++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 56788899999999999999988888999999975432 3467999999999999999999999875 456889999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++|.+++..... ..+.+..+..++ .+|+.++++.+||+|||+++.+...... ...
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~ 161 (260)
T cd05070 84 KGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-ARQ 161 (260)
T ss_pred CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc-ccc
Confidence 9999999864321 123443333332 3344467788999999999876543221 112
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++..|||||.+....++.++||||||+++|||++ |+.|+..... ...... . ... .....+.
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~---~-~~~---------~~~~~~~ 226 (260)
T cd05070 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--REVLEQ---V-ERG---------YRMPCPQ 226 (260)
T ss_pred CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHH---H-HcC---------CCCCCCC
Confidence 2346678999999998899999999999999999999 7777743211 111111 1 110 0011122
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.....+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 227 DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 334568899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=259.73 Aligned_cols=233 Identities=25% Similarity=0.383 Sum_probs=170.8
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|.+.++||+|+||.||+|+..+...||+|.++... ...++|.+|++++.+++||||+++++++. ....++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 35688999999999999999998777789999997532 23467999999999999999999999874 45678999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++|+|.+++..... ..+.+..... ...+|+.+.++.+||+|||+++.+...... ..
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-~~ 160 (262)
T cd05071 83 SKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-AR 160 (262)
T ss_pred CCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-cc
Confidence 99999999864221 1123332222 233444567888999999999876543321 12
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....++..|+|||+..+..++.++||||||+++|||++ |+.|+...... .... ...... .....
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--~~~~----~~~~~~---------~~~~~ 225 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLD----QVERGY---------RMPCP 225 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--HHHH----HHhcCC---------CCCCc
Confidence 23456788999999999999999999999999999999 66676432111 1111 000000 00112
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+.+++..|++.+|++||++.+++++|+..
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 23445678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-30 Score=257.51 Aligned_cols=228 Identities=21% Similarity=0.308 Sum_probs=183.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+-|.+.++||+|+||.|||+.++. |+.||||.+... ..++++..|+.+|.+...|++|++||.+.....+|+|||||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 457788999999999999998764 999999998754 45789999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 604 VNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
.-|++.+.++..++. |.+.-.||+.+|-||+.+.++.+||+|||.|-.+...- ....+
T Consensus 111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--AKRNT 188 (502)
T KOG0574|consen 111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--AKRNT 188 (502)
T ss_pred CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhH--HhhCc
Confidence 999999887644321 23344577788889999999999999999998774332 23345
Q ss_pred ccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC--CH
Q 003402 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV--SL 741 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~--~~ 741 (823)
+.||+-|||||++..--|..++||||+|+...||.-|++|+......- .--.+.......+ +.
T Consensus 189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---------------AIFMIPT~PPPTF~KPE 253 (502)
T KOG0574|consen 189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---------------AIFMIPTKPPPTFKKPE 253 (502)
T ss_pred cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---------------eeEeccCCCCCCCCChH
Confidence 899999999999999999999999999999999999999986443221 0011111111111 23
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+-+++..|+-.+|++|-|+-++++.
T Consensus 254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 254 EWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 456778899999999999999999998774
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=276.36 Aligned_cols=234 Identities=19% Similarity=0.254 Sum_probs=168.2
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.|++.++||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.++.+++|||||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999865 47899999997532 2345678999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc-----
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL----- 657 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~----- 657 (823)
|+++|+|.+++...... |..+..||+..+.||+.+.++.+||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 99999999888543211 223344455556677778899999999999864321000
Q ss_pred ----------------------------------------ccccccccccccccccccccCCCCCchhhHHHHHHHHHHH
Q 003402 658 ----------------------------------------QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697 (823)
Q Consensus 658 ----------------------------------------~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~El 697 (823)
.......+||+.|||||.+.+..++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 0001235799999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHH--ccccCcCCCCCHHHHHHH
Q 003402 698 LSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALL--CVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 698 ltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~--Cl~~dP~~RPt~~evl~~ 771 (823)
++|+.||......... ........... ..........+.+++.. |+..+|..||++.+++..
T Consensus 242 ltG~~Pf~~~~~~~~~-----~~i~~~~~~~~-------~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 242 LVGQPPFLAPTPTETQ-----LKVINWENTLH-------IPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HhCCCCCcCCCHHHHH-----HHHHccccccC-------CCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999998543221100 00100000000 00011122345555544 777778889999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=259.86 Aligned_cols=234 Identities=22% Similarity=0.322 Sum_probs=170.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||+|... +++.||+|.+... .....++|.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 35778899999999999999864 5789999998654 334456799999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc---------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccc
Q 003402 603 MVNKSLDVFLFDPTK---------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~---------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
+++++|..+...... .|..+..|+...+.||+.+.++.+||+|||++..+.... .....||
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~----~~~~~~~ 156 (279)
T cd06619 81 MDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI----AKTYVGT 156 (279)
T ss_pred CCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc----ccCCCCC
Confidence 999999765321110 011222333333455666888999999999998764321 2335799
Q ss_pred ccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch--hHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL--LGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 668 ~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l--~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
..|+|||++.+..++.++||||||+++|||++|+.|+.......... ....... .... .+.+ .......
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~---~~~~~~~ 227 (279)
T cd06619 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI-VDED-----PPVL---PVGQFSE 227 (279)
T ss_pred hhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHH-hccC-----CCCC---CCCcCCH
Confidence 99999999999999999999999999999999999985432211110 1111000 0000 0010 0111234
Q ss_pred HHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 746 RYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++.+++..|++.+|++||++.++++.
T Consensus 228 ~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 228 KFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 67889999999999999999998875
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=258.81 Aligned_cols=236 Identities=21% Similarity=0.345 Sum_probs=169.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||.||+|+.. +++.||+|.+........+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 356888999999999999999874 5789999999765444556788999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
+++++|.+++...... |..+..|+.....+|..+.++.+||+|||+++.+..... ....
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~ 165 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA--KRKS 165 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc--ccCc
Confidence 9999999987543211 111122222223445557788899999999987643211 1223
Q ss_pred cccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 664 IVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
..|++.|+|||.+. ...++.++|||||||++|||++|+.|+......... ... .. .....+.... .
T Consensus 166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-----~~~-~~---~~~~~~~~~~--~ 234 (267)
T cd06646 166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-----FLM-SK---SNFQPPKLKD--K 234 (267)
T ss_pred cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-----eee-ec---CCCCCCCCcc--c
Confidence 57899999999884 455789999999999999999999987432211000 000 00 0000111111 1
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
......+.+++..||+.+|++||+++++++.|
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 235 TKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 12345778899999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-29 Score=271.31 Aligned_cols=223 Identities=19% Similarity=0.218 Sum_probs=166.0
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
+.||+|+||.||+++.. +++.||+|.++.. .......+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999865 5899999999753 2234457889999999999999999999999999999999999999
Q ss_pred CchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccc
Q 003402 607 SLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 607 sL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
+|..++...... |..+..|++..+.||+.+.++.+||+|||+++....... ......||
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt 158 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGT 158 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--ccccccCC
Confidence 998877543211 222333444445666678899999999999986432221 12346799
Q ss_pred ccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHH
Q 003402 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747 (823)
Q Consensus 668 ~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~ 747 (823)
+.|||||++.+..++.++|||||||++|||++|+.|+.....+ .... ..... . ...+......+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~---~~~~~-~----------~~~p~~~~~~~ 222 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFE---LILME-E----------IRFPRTLSPEA 222 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HHHH---HHhcC-C----------CCCCCCCCHHH
Confidence 9999999999999999999999999999999999997532211 1111 00000 0 01112234567
Q ss_pred HHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 748 INVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 748 ~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
.+++..||+.||++|| ++.++++.
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 7899999999999998 78888753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=264.67 Aligned_cols=240 Identities=23% Similarity=0.327 Sum_probs=172.0
Q ss_pred cCcceeeeeccccceeEEeeee-----cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~ 596 (823)
+.|++.++||+|+||.||++++ .++..||+|.++... ....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4577889999999999999974 247789999987543 34456899999999999999999999999875 578
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++||||+++++|..++..... .+.+. |+...+.||+.+.++.+||+|||+++.+..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 999999999999998854221 12333 333334455567888999999999987654
Q ss_pred Ccc-ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccc---------hhHHHHhhccC
Q 003402 655 DEL-QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFN---------LLGHAWSLCKN 724 (823)
Q Consensus 655 ~~~-~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~---------l~~~~~~~~~~ 724 (823)
... ........|+..|+|||++.+..++.++|||||||++|||++++.|.......... ...........
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE 241 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHc
Confidence 321 11223356778899999999889999999999999999999987654221100000 00000000000
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+. ...........+.+++..||+.+|++||++.++++.|+..
T Consensus 242 ~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 242 GK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred Cc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00 0111223456788999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=266.33 Aligned_cols=237 Identities=24% Similarity=0.377 Sum_probs=172.8
Q ss_pred hcCcceeeeeccccceeEEeeeecC--------CcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN--------GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ 593 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~--------~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~ 593 (823)
.++|.+.+.||+|+||.||+++... ...+|+|.+... .....+++.+|+.++.++ +||||+++++++.+.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3578999999999999999997532 357999999753 234456789999999999 799999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHH----------------------HHhccccccC
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVR----------------------IIDGIAQDQH 638 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~----------------------i~~~ia~d~~ 638 (823)
+..++||||+++|+|.+++..... ...+.+..... ...+|+.+.+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 176 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC
Confidence 999999999999999999864321 11234433322 3344555778
Q ss_pred CCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHH
Q 003402 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGH 717 (823)
Q Consensus 639 ~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~ 717 (823)
+.+||+|||+++.+.............+++.|||||.+.+..++.++|||||||++|||++ |+.|+..... ..+
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--~~~--- 251 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EEL--- 251 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHH---
Confidence 8999999999986643222222222345678999999999999999999999999999998 7777642211 111
Q ss_pred HHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 718 AWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 718 ~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......... ...+......+.+++..||+.+|++||+|.+|++.|+..
T Consensus 252 -~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 252 -FKLLKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred -HHHHHcCCC---------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 111111110 011222345777899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=261.30 Aligned_cols=235 Identities=23% Similarity=0.325 Sum_probs=170.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCc----EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~----~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.++||+|+||+||+|++. +++ .||+|.++.. .....+++.+|+.++..++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence 56888899999999999999854 344 4899998754 334456899999999999999999999999754 5779
Q ss_pred EEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
++||+++|+|.+++...... |..+..|++....||+.+++..+||+|||+++.+......
T Consensus 86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~ 165 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 165 (279)
T ss_pred EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence 99999999999998653211 1122233333344555567888999999999987543322
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.......+++.|||||.+.+..++.++|||||||++|||++ |..|+...... .+... ...+.. .
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~----~~~~~~---------~ 230 (279)
T cd05109 166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDL----LEKGER---------L 230 (279)
T ss_pred eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH----HHCCCc---------C
Confidence 22222345678999999999999999999999999999998 78876432211 11111 111100 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+......+.+++..||+.||++||++.+++..|+..
T Consensus 231 ~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 231 PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 11122345678899999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=262.60 Aligned_cols=244 Identities=21% Similarity=0.234 Sum_probs=168.1
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.++||+|+||.||+|+.. +++.||||.++.... .....+.+|+.++++++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367999999999999999999876 588999999875432 223567899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 602 YMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|++ ++|.+++...... |.....|++..+.||+.+.++.+||+|||+++...... ...
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~ 160 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--HTY 160 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--ccC
Confidence 996 5676666432111 12223344444556666888999999999998653322 112
Q ss_pred ccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc---c---cc--ccC
Q 003402 662 KRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR---A---HE--LMD 732 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~---~---~~--l~d 732 (823)
....||+.|||||.+.+ ..++.++|||||||++|||++|+.||......... +........... . .. ..+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQ-LERIFLVLGTPNEDTWPGVHSLPHFK 239 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH-HHHHHHHhCCCChhhccchhhccccc
Confidence 23568999999998865 45899999999999999999999998643221111 111111000000 0 00 000
Q ss_pred c-ccc--cCCC-------HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 P-VLQ--NEVS-------LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~-~l~--~~~~-------~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+ ... .... ......+.+++..|++.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0 000 0000 0112456789999999999999999998864
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=266.39 Aligned_cols=238 Identities=25% Similarity=0.379 Sum_probs=174.1
Q ss_pred HhcCcceeeeeccccceeEEeeeec--------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL--------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE 592 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~--------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~ 592 (823)
..++|.+.+.||+|+||.||+++.. ++..||+|.+... .....+++.+|+.++..+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3466888899999999999999742 2457999998753 234457899999999999 89999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHH----------------------HHHhcccccc
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRV----------------------RIIDGIAQDQ 637 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~----------------------~i~~~ia~d~ 637 (823)
....++||||+++|+|.+++..... ...+.+.... ....+|+.+.
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~ 172 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE 172 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC
Confidence 9999999999999999999864321 1123333322 2233444467
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~ 716 (823)
++.+||+|||+++.+.............+++.|+|||.+.+..++.++||||||+++|||++ |..|+..... ..
T Consensus 173 ~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~ 247 (304)
T cd05101 173 NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----EE 247 (304)
T ss_pred CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----HH
Confidence 88899999999997754333333333456788999999999999999999999999999998 6666532211 11
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
. ......+... ..+......+.+++..||+.+|++||+|.+|++.|+..
T Consensus 248 ~-~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 248 L-FKLLKEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred H-HHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 1 1111111100 11123345688899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=260.89 Aligned_cols=234 Identities=24% Similarity=0.403 Sum_probs=170.0
Q ss_pred cCcceeeeeccccceeEEeeeecC-C---cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-G---QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~---~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
..|++.+.||+|+||.||+|+... + ..||||.+... .....++|..|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 347788999999999999998753 3 36999998754 344567899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++++|..++..... .+.+.....+ ..+|+.+.+..+||+|||+++.+.....
T Consensus 84 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999864321 2333333222 2344447788999999999987643322
Q ss_pred ccc-cccc--cccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 658 QGN-TKRI--VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 658 ~~~-~~~~--~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... .... ..+..|+|||.+....++.++|||||||++||+++ |..|+..... ....... ... .
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i----~~~-----~-- 228 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAI----EQD-----Y-- 228 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHH----HcC-----C--
Confidence 111 1111 12457999999999999999999999999999987 8888743221 1111111 000 0
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+......+.+++..||+.+|.+||++.+|+.+|+..
T Consensus 229 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 --RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0011122345578899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=257.14 Aligned_cols=228 Identities=24% Similarity=0.330 Sum_probs=171.2
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.+.||+|+||.||++... +++.||+|.+... .....+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999875 4889999998643 334567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++..... ..+.+.....+ +.+|..+.++.+||+|||+++.+..... .
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~--~ 157 (256)
T cd08529 81 AENGDLHKLLKMQRG-RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--F 157 (256)
T ss_pred CCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc--h
Confidence 999999999865321 12333322222 2334446778999999999987654322 1
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....|++.|+|||+..+..++.++|||||||++|||++|+.|+..... .... ... ..+.. ...+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~---~~~-~~~~~---------~~~~ 222 (256)
T cd08529 158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALI---LKI-IRGVF---------PPVS 222 (256)
T ss_pred hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHH---HHH-HcCCC---------CCCc
Confidence 2335789999999999999999999999999999999999999853321 1111 111 11100 0111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++.+||+.+|++||+|.++++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1234568889999999999999999999874
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=270.75 Aligned_cols=223 Identities=19% Similarity=0.222 Sum_probs=167.2
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
+.||+|+||.||+++.. +++.||||.+.+. .....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 4889999999753 2334567899999999999999999999999999999999999999
Q ss_pred CchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccc
Q 003402 607 SLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 607 sL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
+|..++...... |..+..||+..+.||+.+.++.+||+|||+++...... .......||
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt 158 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMKTFCGT 158 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cccccccCC
Confidence 998877543211 22233344445566677889999999999998643221 122346799
Q ss_pred ccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHH
Q 003402 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747 (823)
Q Consensus 668 ~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~ 747 (823)
+.|||||++.+..++.++|||||||++|||++|+.|+...... .... ..... + ...+......+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--~~~~---~~~~~-------~----~~~p~~~~~~~ 222 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFE---LILME-------D----IKFPRTLSADA 222 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--HHHH---HhccC-------C----ccCCCCCCHHH
Confidence 9999999999999999999999999999999999998532111 1110 00000 0 01122234567
Q ss_pred HHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 748 INVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 748 ~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
.+++..||+.||++|| ++.++++.
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 8899999999999997 88888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=252.19 Aligned_cols=236 Identities=24% Similarity=0.361 Sum_probs=175.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+|... +++.||+|.++.. .....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999886 6899999988632 2233568999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCc-ccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 601 EYMVNKSLDVFLFDPTK-KHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~-~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||+++++|..++..... ...+.......+ +.+|..+.++.+||+|||+++.+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99999999998854211 122333322222 2334447788999999999987643321
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......|++.|+|||.+.+..++.++|||||||++|||++|+.|+...... ........ ..+. ..
T Consensus 162 --~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~-~~~~---------~~ 226 (267)
T cd08224 162 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKI-EKCD---------YP 226 (267)
T ss_pred --ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc---HHHHHhhh-hcCC---------CC
Confidence 122356899999999999989999999999999999999999987432211 11111000 0000 01
Q ss_pred CCCH-HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 738 EVSL-PMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 738 ~~~~-~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+. .....+.+++.+||+.+|++||++.+|+++|+..
T Consensus 227 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 227 PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 1111 3345678899999999999999999999999764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-28 Score=260.90 Aligned_cols=232 Identities=21% Similarity=0.334 Sum_probs=172.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.+|++.++||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++.+..+.+.++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 56888899999999999999864 58899999997655555678999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 604 VNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
++++|..++...... |..++.|+...+.+|..+.++.+||+|||+++....... ......
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~ 177 (296)
T cd06654 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMV 177 (296)
T ss_pred CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--ccCccc
Confidence 999999988542111 111222333333445557888999999999986543321 122357
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
|++.|+|||.+.+..++.++|||||||++|||++|+.|+....... .+ ....... ... + ..+.....
T Consensus 178 ~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-~~----~~~~~~~-~~~-----~--~~~~~~~~ 244 (296)
T cd06654 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-AL----YLIATNG-TPE-----L--QNPEKLSA 244 (296)
T ss_pred CCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-hH----HHHhcCC-CCC-----C--CCccccCH
Confidence 8999999999998889999999999999999999999985332111 00 0010110 000 0 01122334
Q ss_pred HHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 746 RYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.+++.+||+.+|++||++.+|++.
T Consensus 245 ~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 245 IFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 57789999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=270.61 Aligned_cols=240 Identities=15% Similarity=0.132 Sum_probs=168.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||.||++... .++.||+|.... +.+.+|++++++++|||||++++++......++|+||
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 367999999999999999999875 478999997532 4578999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
+. ++|..++...... |..++.||+..+.||+.+.++.+||+|||+|+...... ......
T Consensus 165 ~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~ 242 (391)
T PHA03212 165 YK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-ANKYYG 242 (391)
T ss_pred CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-cccccc
Confidence 95 6787776432211 23344555556667777888999999999997543221 112234
Q ss_pred ccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-----ccchhHHHHhhccCC----------ccc
Q 003402 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-----SFNLLGHAWSLCKND----------RAH 728 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~-----~~~l~~~~~~~~~~~----------~~~ 728 (823)
..||+.|||||++.+..++.++|||||||++|||++|+.|+...... ....+.......... ...
T Consensus 243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 68999999999999999999999999999999999999876432110 001111111000000 000
Q ss_pred ccc---------Cccccc--CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 ELM---------DPVLQN--EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 ~l~---------d~~l~~--~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++. .+.... .........+.+++.+||+.||++|||+.|+++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000 000000 0001234567889999999999999999999874
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=277.78 Aligned_cols=235 Identities=22% Similarity=0.267 Sum_probs=184.4
Q ss_pred HHhcCcceeeeeccccceeEEeeeecCC-cEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeE-EEe------
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLNG-QEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGC-CIE------ 592 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~-~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~-~~~------ 592 (823)
...-++++.+.|.+|||+.||.+....+ ..+|+|++-..+.+.++..++||.+|++|. |+|||.+++. ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 3445677889999999999999998776 999999987778888999999999999997 9999999993 322
Q ss_pred CCeEEEEEEcccCCCchhhccCCCc---------------------ccc--cCHHHHHHHHhccccccCCCceeceeece
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTK---------------------KHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMA 649 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~---------------------~~~--l~~~~r~~i~~~ia~d~~~~~KI~DFGla 649 (823)
.-+.+|+||||++|+|-+++..+.. .|. .++.||+.+++||+...+++.||||||-|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 2478999999999999888742111 022 34889999999999999999999999998
Q ss_pred eecCCCccccc-------cccccccccccccccc---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH
Q 003402 650 RMFGGDELQGN-------TKRIVGTYGYMSPEYA---LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719 (823)
Q Consensus 650 ~~~~~~~~~~~-------~~~~~Gt~~YmAPE~~---~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~ 719 (823)
........... .-...-|+-|.|||++ .+..+++|+|||++||+||-|+....||+..
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s------------ 261 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES------------ 261 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC------------
Confidence 64322110000 0012358999999987 4678999999999999999999999998532
Q ss_pred hhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 720 ~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
....|++....-...+....++..|+..||+.||++||++-||+..+-.
T Consensus 262 ------g~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 262 ------GKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred ------cceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 1233444444333445788899999999999999999999999887644
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=269.80 Aligned_cols=223 Identities=23% Similarity=0.289 Sum_probs=165.6
Q ss_pred eeeccccceeEEeeeec----CCcEEEEEEeccCC----hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 531 SKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~~----~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++||+|+||.||+++.. .++.||||.++... ......+.+|+.++.+++||||+++++++.+++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 68999999999999753 47899999987531 22345678999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
+++|+|..++...... |..+..|++..+.||+.+.++.+||+|||+++...... .....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 159 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG--TVTHT 159 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--Ccccc
Confidence 9999998887543211 12233344444556666889999999999998543222 12234
Q ss_pred ccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHH
Q 003402 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~ 743 (823)
..||+.|||||++.+..++.++|||||||++|||++|+.|+...... ......... . ...+...
T Consensus 160 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~~~-~----------~~~~~~~ 223 (323)
T cd05584 160 FCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKILKG-K----------LNLPPYL 223 (323)
T ss_pred cCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcC-C----------CCCCCCC
Confidence 67999999999999989999999999999999999999998532211 111111111 0 0112223
Q ss_pred HHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 744 LVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 744 ~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
...+.+++..||+.||++|| ++.+++..
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 45678899999999999999 78887663
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-29 Score=230.00 Aligned_cols=109 Identities=51% Similarity=0.777 Sum_probs=81.0
Q ss_pred CcEEEeccCCCCCCCC--CceEEEeeCCcEEEEeCCCCeEEEe-cccCCC-CCcEEEEeeCCCEEEEeCCCCCCCCCcee
Q 003402 87 DTVVWVANRNSPIVDK--NGVLTVSNRGNLVLLNQSNGTIWSS-NVSREV-KNPVAQLLDNGNLVIRDNSGSNSTESYLW 162 (823)
Q Consensus 87 ~tvVWvANr~~Pv~~~--~~~L~l~~~G~LvL~d~~g~~vWst-~~~~~~-~~~~a~LlDsGNlVl~~~~~~~~~~~~lW 162 (823)
+||||+|||+.|+.+. ..+|.|+.||+|+|.|..++++|++ ++.+.. .+..|.|+|+|||||+|. .+.+||
T Consensus 2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~-----~~~~lW 76 (114)
T PF01453_consen 2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDS-----SGNVLW 76 (114)
T ss_dssp --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEET-----TSEEEE
T ss_pred cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEee-----cceEEE
Confidence 6999999999999543 4899999999999999999999999 555433 578899999999999996 468999
Q ss_pred eecCCCCccccccccccccccCCCeeEEEEeCCCCCCC
Q 003402 163 QSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPS 200 (823)
Q Consensus 163 QSFD~PTDTlLpgq~l~~~~~~g~~~~l~Sw~s~~dps 200 (823)
|||||||||+||+|+|+.+..++.+..++||++.+|||
T Consensus 77 ~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 77 QSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS 114 (114)
T ss_dssp ESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred eecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence 99999999999999999987777667799999999996
|
Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B .... |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=254.68 Aligned_cols=228 Identities=24% Similarity=0.340 Sum_probs=168.4
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCch
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLD 609 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 609 (823)
++||+|+||.||++...+++.||+|.+...... ..+.|.+|+.++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 479999999999999877999999998764333 5578999999999999999999999999999999999999999999
Q ss_pred hhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccccc
Q 003402 610 VFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG 669 (823)
Q Consensus 610 ~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~ 669 (823)
+++...... |.....|+.....+|+.+.++.+||+|||+++...............++..
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~ 160 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK 160 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceec
Confidence 988542211 111222333334455667888999999999987643322222222345678
Q ss_pred ccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHH
Q 003402 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYI 748 (823)
Q Consensus 670 YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~ 748 (823)
|+|||.+.++.++.++|||||||++|||+| |..|+...... .... ..... .....+......+.
T Consensus 161 y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~----~~~~~---------~~~~~~~~~~~~~~ 225 (251)
T cd05041 161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRE----RIESG---------YRMPAPQLCPEEIY 225 (251)
T ss_pred cCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHH----HHhcC---------CCCCCCccCCHHHH
Confidence 999999998999999999999999999999 77776432211 1111 00000 00011222345788
Q ss_pred HHHHHccccCcCCCCCHHHHHHHHh
Q 003402 749 NVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 749 ~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
+++..|++.+|++||++.||++.|+
T Consensus 226 ~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 226 RLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHhccChhhCcCHHHHHHHhh
Confidence 8999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=256.05 Aligned_cols=229 Identities=27% Similarity=0.416 Sum_probs=169.2
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.+|++.+.||+|+||.||++.+.+++.+|+|.+.... ...++|.+|++++.+++|||++++++++......++|+||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4677889999999999999998778899999987532 234679999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++|.+++..... .+.+.. +.....+|..+.+..+||+|||+++......... ..
T Consensus 83 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~-~~ 159 (256)
T cd05112 83 HGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS-ST 159 (256)
T ss_pred CCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccc-cC
Confidence 9999998864321 122222 2222234444677889999999998764432211 12
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++.+|+|||.+.++.++.++||||||+++|||++ |+.|+..... ..+.. .. ..+ .....+.
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~---~~-~~~--~~~~~~~------- 224 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--SEVVE---TI-NAG--FRLYKPR------- 224 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHHHH---HH-hCC--CCCCCCC-------
Confidence 2345678999999998999999999999999999998 8888743221 11111 11 110 0111111
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
.....+.+++.+||+.+|++||++.+|+++|
T Consensus 225 ~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1235688899999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=255.51 Aligned_cols=229 Identities=26% Similarity=0.368 Sum_probs=174.0
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|++.+.||+|+||.||+|... ++.||||.+..... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 356888899999999999999874 78999999976543 5678999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 604 VNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
++++|.+++...... |..+..|+...+.+|..+.++.+||+|||+++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~----- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD----- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc-----
Confidence 999999998643311 122333444444566668889999999999987632221
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++..|+|||++..+.++.++||||||+++||+++ |+.|+...... .+.... ..+.. ...+.
T Consensus 158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~----~~~~~---------~~~~~ 222 (256)
T cd05039 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHV----EKGYR---------MEAPE 222 (256)
T ss_pred cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH----hcCCC---------CCCcc
Confidence 2345678999999998899999999999999999998 88886433211 111111 11100 01112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.....+.+++.+|++.+|++||++.+++++|++
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 223 GCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 234567889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=268.43 Aligned_cols=226 Identities=22% Similarity=0.294 Sum_probs=163.8
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHH---HhcCCCceeeEEeEEEeCCeEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLI---AKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l---~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
|++.++||+|+||.||+|+.. +++.||||.++... ....+.+.+|++++ .+++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567899999999999999875 48899999997432 22345677776655 567899999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 600 YEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|||+++|+|..++...... |..+..|++..+.||+.+.++.+||+|||+++...... ...
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~ 158 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG--DRT 158 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC--Ccc
Confidence 9999999998887542211 12223334444556666889999999999987543221 223
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||.+.+..++.++|||||||++|||++|+.|+...... .... ..... . ...+.
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--~~~~---~i~~~-~----------~~~p~ 222 (324)
T cd05589 159 STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--EVFD---SIVND-E----------VRYPR 222 (324)
T ss_pred cccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--HHHH---HHHhC-C----------CCCCC
Confidence 3467999999999999999999999999999999999999998532211 1111 11000 0 01111
Q ss_pred HHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRP-----TMSDVVS 770 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~ 770 (823)
.....+.+++..||+.||.+|| ++.++++
T Consensus 223 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 223 FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 2345577899999999999999 4666655
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=254.02 Aligned_cols=236 Identities=23% Similarity=0.350 Sum_probs=170.6
Q ss_pred HHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
+.+++++.....||+|+||.||+|+.. ++..||+|.+........+.+.+|+.++++++|+||+++++++..++..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 445666767789999999999999865 4778999999876666678899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHH----HHH------------------hcccccc-CCCceeceeeceeecCCCc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRV----RII------------------DGIAQDQ-HMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~----~i~------------------~~ia~d~-~~~~KI~DFGla~~~~~~~ 656 (823)
+||+++++|..++............... +++ .+|..+. +..+||+|||++..+....
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence 9999999999998653211111222111 222 2333343 5689999999998764322
Q ss_pred cccccccccccccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~--~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
. ......|++.|+|||++.... ++.++|||||||++|||++|+.|+.......... +.. . .. .
T Consensus 164 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~----~~~---~-~~-----~ 228 (268)
T cd06624 164 P--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM----FKV---G-MF-----K 228 (268)
T ss_pred C--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH----hhh---h-hh-----c
Confidence 1 122346899999999987654 7899999999999999999999975322111000 000 0 00 0
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+......+.+++.+||+.+|++||++.|++..
T Consensus 229 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0111222344567889999999999999999998863
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=261.78 Aligned_cols=240 Identities=23% Similarity=0.319 Sum_probs=163.1
Q ss_pred cCcceeeeeccccceeEEeeeec--CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCceeeEEeEEEe-----
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL--NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKL---QHRNLVRLLGCCIE----- 592 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l---~H~Niv~l~g~~~~----- 592 (823)
++|++.++||+|+||.||+|+.. +++.||||.++... ......+.+|+.++..+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999863 36889999986432 22234567788777765 69999999999863
Q ss_pred CCeEEEEEEcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
....++||||++ ++|..++...... |..+..|++..+.||+.+.++.+||+|||+++.
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 456899999996 6888877542211 112222333334455567889999999999987
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc---CCccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK---NDRAH 728 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~---~~~~~ 728 (823)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|++|+...... ..+........ .....
T Consensus 160 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~--~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 160 YSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred ccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHHhCCCChhhch
Confidence 6433 2233467999999999999999999999999999999999999998543221 11111111100 00000
Q ss_pred ---cccCcccc--c-----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 729 ---ELMDPVLQ--N-----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 729 ---~l~d~~l~--~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.+...... . .........+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000000 0 001123345678999999999999999999886
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=272.02 Aligned_cols=239 Identities=26% Similarity=0.380 Sum_probs=169.3
Q ss_pred hcCcceeeeeccccceeEEeeee------cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC-C
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ-G 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~------~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~-~ 594 (823)
.++|++.++||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.++.++ +|||||+++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35788999999999999999973 346789999997532 33456789999999999 789999999988754 5
Q ss_pred eEEEEEEcccCCCchhhccCCCc---------------------------------------------------------
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK--------------------------------------------------------- 617 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 617 (823)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999988753210
Q ss_pred -------ccccCHHHHH----HH------------------HhccccccCCCceeceeeceeecCCCccccccccccccc
Q 003402 618 -------KHLLGWQLRV----RI------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668 (823)
Q Consensus 618 -------~~~l~~~~r~----~i------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~ 668 (823)
...+.+.... ++ ..+|+.+.++.+||+|||+++.+.............+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 0012222222 22 234444678899999999998764332222223345678
Q ss_pred cccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHH
Q 003402 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747 (823)
Q Consensus 669 ~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~ 747 (823)
.|||||.+.+..++.++||||||+++|||++ |..|+....... .+. .....+.... .+......+
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~----~~~~~~~~~~---------~~~~~~~~~ 311 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFC----RRLKEGTRMR---------APDYTTPEM 311 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHH----HHHhccCCCC---------CCCCCCHHH
Confidence 8999999999999999999999999999997 777764322111 111 1111111000 011123457
Q ss_pred HHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 748 INVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 748 ~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.+++..||+.||++||++.+|++.|+..+
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 88999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=256.10 Aligned_cols=234 Identities=28% Similarity=0.425 Sum_probs=174.7
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
..++|.+.++||+|+||.||++...+++.||||.+.... ...+++.+|+.++++++|+||+++++++.+....++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 346789999999999999999998888899999997543 3457899999999999999999999999998999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++..... ..+.+..... ...+|..+.++.+||+|||+++.+...... .
T Consensus 83 ~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~ 160 (261)
T cd05034 83 MSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT-A 160 (261)
T ss_pred cCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhh-h
Confidence 999999999865321 1233333222 233444577889999999999876543211 1
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....++..|+|||.+.+..++.++||||||+++||+++ |+.|+..... ....... ..+ .....
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~----~~~---------~~~~~ 225 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--REVLEQV----ERG---------YRMPR 225 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----HcC---------CCCCC
Confidence 122345678999999998899999999999999999999 8888743211 1111111 000 00011
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
+......+.+++.+|++.+|++||++.++++.|+.
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 226 PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11224568889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=274.95 Aligned_cols=236 Identities=20% Similarity=0.246 Sum_probs=173.7
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
..++|++.++||+|+||.||+++.. +++.||+|.+.+. .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4467999999999999999999875 4889999999642 12334568899999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++.+...... .
T Consensus 121 v~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~-~ 199 (370)
T cd05596 121 VMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV-R 199 (370)
T ss_pred EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc-c
Confidence 99999999999988543211 2233444455556677789999999999999876543221 1
Q ss_pred cccccccccccccccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 661 TKRIVGTYGYMSPEYALEG----VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~----~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
.....||+.|||||++... .++.++|||||||++|||++|+.|+...... ........... .+ .
T Consensus 200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~~~i~~~~~--~~-----~ 267 (370)
T cd05596 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GTYSKIMDHKN--SL-----T 267 (370)
T ss_pred CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-----HHHHHHHcCCC--cC-----C
Confidence 2346799999999998653 4789999999999999999999998532211 11111111100 00 0
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCC--CCCHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAED--RPTMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~ 771 (823)
-.........+.+++..|++.+|++ ||++.+++..
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 268 FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0011123456788999999999987 9999999775
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=271.49 Aligned_cols=182 Identities=23% Similarity=0.307 Sum_probs=147.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||+||+++.. +++.||||.+++.. ....+.+.+|+.++.+++||||+++++.+.+....+|||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999865 48899999997532 233457889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc---
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ--- 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~--- 658 (823)
||+++|+|.+++...... |..+..||+..+.||+.+.++.+||+|||+++.+......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 999999999988543211 2334445556667777789999999999999865321100
Q ss_pred ------------------------------cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 659 ------------------------------GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 659 ------------------------------~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
......+||+.|||||++.+..++.++|||||||++|||++|+.|+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 001235799999999999999999999999999999999999999853
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=254.14 Aligned_cols=237 Identities=24% Similarity=0.351 Sum_probs=174.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||++... +++.+|||.+... .....++|.+|+.+++.++||||+++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46778899999999999999864 6899999988643 2234468999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCc-ccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 601 EYMVNKSLDVFLFDPTK-KHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~-~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||+++++|.+++..... ...+.+.....+ +.+|..+.++.+||+|||+++.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 99999999998853211 122333333222 2334447788899999999987643321
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......|+..|+|||++.+..++.++||||||+++|||++|..|+.....+...+.. . ..+...+.
T Consensus 162 --~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~------~~~~~~~~--- 227 (267)
T cd08229 162 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK---K------IEQCDYPP--- 227 (267)
T ss_pred --ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh---h------hhcCCCCC---
Confidence 122357899999999999999999999999999999999999997432211111111 0 00111110
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.........+.+++..||+.||++||||.+|+++++..
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 228 LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 11122455788899999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=255.88 Aligned_cols=231 Identities=26% Similarity=0.397 Sum_probs=169.7
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|.+.++||+|+||.||++...++..||+|.+.... ...+.|.+|+.++++++|||++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4588889999999999999998777789999986532 34467999999999999999999999875 456889999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++|.+++..... ..+.+..+..+ ..+|..++++.+||+|||+++.+...... ...
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-~~~ 161 (260)
T cd05069 84 KGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-ARQ 161 (260)
T ss_pred CCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-ccC
Confidence 9999999864321 11333333222 23444477888999999999876443221 112
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++..|+|||.+.+..++.++|||||||++|||++ |+.|+..... ....... .... ....+.
T Consensus 162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~----~~~~---------~~~~~~ 226 (260)
T cd05069 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--REVLEQV----ERGY---------RMPCPQ 226 (260)
T ss_pred CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----HcCC---------CCCCCc
Confidence 2356788999999999999999999999999999999 7877643211 1111111 1100 001112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.....+.+++.+||+.||++||++.+|++.|+.
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 227 GCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 234568889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=257.52 Aligned_cols=234 Identities=24% Similarity=0.384 Sum_probs=171.7
Q ss_pred cCcceeeeeccccceeEEeeeecC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.+.||+|+||.||+|+... +..+|+|.++... ....+.|.+|+.++.+++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 568888999999999999998642 3479999987532 33456899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++++|.+++..... .+.+. |+.....+|+.+.++.+||+|||+++.+.....
T Consensus 84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 84 TEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 999999999999864321 12222 233334455557888999999999987654321
Q ss_pred cc-ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 658 QG-NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 658 ~~-~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.. ......++..|+|||++.+..++.++||||||+++||+++ |+.|+...... ...... ..+.
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~----~~~~--------- 226 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAI----EEGY--------- 226 (267)
T ss_pred eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHH----hCCC---------
Confidence 11 1122334678999999998899999999999999999887 89887433211 111111 1110
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...........+.+++..|++.+|++||+|.++++.|+..
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0011112345678899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=270.22 Aligned_cols=233 Identities=19% Similarity=0.277 Sum_probs=171.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+++.. +++.||||.++... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999875 48899999997532 234567889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||+++|+|.+++...... |..+..|++..+.||+.+.++.+||+|||+++.+...... .
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~ 159 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-N 159 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce-e
Confidence 999999999988643111 2233344445556677788999999999999877543322 2
Q ss_pred ccccccccccccccccc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 661 TKRIVGTYGYMSPEYAL------EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~------~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.....||+.|||||++. ...++.++|||||||++|||++|+.|+...... ...............
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~---- 230 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KTYNNIMNFQRFLKF---- 230 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HHHHHHHcCCCccCC----
Confidence 23357999999999986 456889999999999999999999998532211 111111111110000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.........+.+++..|++ +|.+||++.+++..
T Consensus 231 ---~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 231 ---PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ---CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0111234456778888998 99999999998864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-29 Score=274.42 Aligned_cols=234 Identities=22% Similarity=0.294 Sum_probs=174.2
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.++||+|+||+||+|+.. +++.||||.++... ....+.+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999876 58999999997532 234567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc-----
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE----- 656 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~----- 656 (823)
||+++++|..++...... |..++.|++..+.||+.+.++.+||+|||+++.+....
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 999999999988653211 22333344444556667889999999999998764432
Q ss_pred ----------------------cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch
Q 003402 657 ----------------------LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL 714 (823)
Q Consensus 657 ----------------------~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l 714 (823)
.........||+.|+|||.+.+..++.++|||||||++|||++|+.|+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~---- 236 (350)
T cd05573 161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ---- 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH----
Confidence 001223457999999999999999999999999999999999999998543211
Q ss_pred hHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCC-HHHHHHH
Q 003402 715 LGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT-MSDVVSM 771 (823)
Q Consensus 715 ~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~~ 771 (823)
.......... ..+ ...........+.+++..|++ ||.+||+ +.++++.
T Consensus 237 -~~~~~i~~~~--~~~-----~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 -ETYNKIINWK--ESL-----RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred -HHHHHHhccC--Ccc-----cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 1111111100 000 000011134567788889997 9999999 9999875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=255.92 Aligned_cols=226 Identities=24% Similarity=0.333 Sum_probs=163.5
Q ss_pred eeccccceeEEeeeec---CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCC
Q 003402 532 KLGEGGFGPVYKGRLL---NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKS 607 (823)
Q Consensus 532 ~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gs 607 (823)
.||+|+||.||+|.+. .+..||||.+.... ....++|.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999764 35579999987653 234567999999999999999999999885 457899999999999
Q ss_pred chhhccCCCcccccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCCCccc-cccccc
Q 003402 608 LDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ-GNTKRI 664 (823)
Q Consensus 608 L~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~-~~~~~~ 664 (823)
|.+++..... .+++. |++..+.+|+.+.+..+||+|||+++.+..+... ......
T Consensus 81 L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9998864221 22222 2333344555577888999999999866433221 111122
Q ss_pred cccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHH
Q 003402 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743 (823)
Q Consensus 665 ~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~ 743 (823)
.+++.|+|||++....++.++|||||||++||+++ |+.|+...... ... .....+. ....+...
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~----~~~~~~~---------~~~~~~~~ 223 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVM----SFIEQGK---------RLDCPAEC 223 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHH----HHHHCCC---------CCCCCCCC
Confidence 34678999999988889999999999999999996 88887533211 111 1111111 11122234
Q ss_pred HHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 744 LVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 744 ~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+.+++..||+.+|++||++.+|.+.|+..
T Consensus 224 ~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 224 PPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 56777899999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=258.81 Aligned_cols=231 Identities=23% Similarity=0.383 Sum_probs=167.2
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC------
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ------ 593 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~------ 593 (823)
.+++.|++.++||+|+||.||+|...+ ++.||+|.+.... ....++.+|+.++.++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 356778888999999999999998754 7899999986542 3456789999999998 799999999999763
Q ss_pred CeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceee
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~ 651 (823)
...++||||+++++|..++..... ..+.+.....++ .+|..++++.+||+|||+++.
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 468999999999999998865321 223333322222 233447788899999999987
Q ss_pred cCCCcccccccccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
+.... .......|++.|+|||++. +..++.++|||||||++|||++|+.|+....... ........ .
T Consensus 161 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~-----~~~~~~~~-~ 232 (272)
T cd06637 161 LDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----ALFLIPRN-P 232 (272)
T ss_pred ccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH-----HHHHHhcC-C
Confidence 64322 2233467999999999986 3468899999999999999999999975322110 00111110 0
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
...+ ........+.+++.+||+.+|.+||++.++++
T Consensus 233 ~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 233 APRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0011 11123346788999999999999999999876
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=270.54 Aligned_cols=234 Identities=22% Similarity=0.284 Sum_probs=170.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+++.. +++.||||++.... ....+.+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46889999999999999999875 48899999997531 234466889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc--
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG-- 659 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~-- 659 (823)
||+++|+|.+++...... |..++.|++..+.||+.+.++.+||+|||+++.+.......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 999999999988543211 22334445555666777899999999999998653221000
Q ss_pred ----------------------------------ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003402 660 ----------------------------------NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTG 705 (823)
Q Consensus 660 ----------------------------------~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~ 705 (823)
.....+||+.|||||++....++.++|||||||++|||++|+.|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 0112469999999999999999999999999999999999999985
Q ss_pred CCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCC---HHHHHHH
Q 003402 706 VYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT---MSDVVSM 771 (823)
Q Consensus 706 ~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt---~~evl~~ 771 (823)
..... ... ........ .+ ...........+.+++..|+. +|.+|++ +.|+++.
T Consensus 241 ~~~~~--~~~---~~i~~~~~--~~-----~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 241 SDNPQ--ETY---RKIINWKE--TL-----QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCHH--HHH---HHHHcCCC--cc-----CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 33211 111 11111000 00 000011223456677778886 8999998 8888764
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-28 Score=255.70 Aligned_cols=233 Identities=24% Similarity=0.331 Sum_probs=170.2
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-----GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-----~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++.+++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57888999999999999999865 48899999886431 2234578999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+||+++++|.+++...... |..+..|+...+.+|..++++.+||+|||+++.+.......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 99999999999887542210 11112222223345556788899999999998764322111
Q ss_pred -ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 -NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 -~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......|+..|+|||++.+..++.++||||||+++|||++|+.|+..... . ........... ...
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~---~~~~~~~~~~~---------~~~ 227 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA--M---AAIFKIATQPT---------NPQ 227 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch--H---HHHHHHhccCC---------CCC
Confidence 11235688999999999999999999999999999999999999743211 1 10111111100 111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++..||+.+|++||++.+++++
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 222334567789999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=268.09 Aligned_cols=243 Identities=21% Similarity=0.267 Sum_probs=165.2
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CeEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GEKI 597 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~~~ 597 (823)
+|++.++||+|+||.||+|+.. +++.||||++... ......++.+|+.++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999865 5899999998743 223446789999999999999999999998653 3589
Q ss_pred EEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc-
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL- 657 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~- 657 (823)
+||||+. ++|.+++...... |..++.|++....||..+.++.+||+|||+++.......
T Consensus 81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 9999996 6888877532210 112223333344555668899999999999986533221
Q ss_pred ccccccccccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh-----------ccC
Q 003402 658 QGNTKRIVGTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL-----------CKN 724 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~-----------~~~ 724 (823)
........||+.|||||++.. ..++.++|||||||++|||++|+.|+...... ......... ...
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHhhh
Confidence 111234579999999999865 67899999999999999999999987533211 111100000 000
Q ss_pred CccccccCccccc-CCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 DRAHELMDPVLQN-EVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ~~~~~l~d~~l~~-~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....+.++..... ... ......+.+++..||+.||++||+++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000000000 000 0123456789999999999999999999874
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=259.76 Aligned_cols=230 Identities=22% Similarity=0.264 Sum_probs=168.3
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
+|+..++||+|+||+||++... +++.||||.+.... ......+.+|+.++++++||||+++++.+.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999875 58899999997532 2233567899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++|+|..++..... ..+.+.... ..+.+|+.++++.+||+|||+++.+.....
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-- 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET-- 157 (285)
T ss_pred ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc--
Confidence 9999999988754321 112332222 223344457788999999999987643221
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....||+.|||||++.+..++.++|||||||++|||++|+.|+....... ............ ....
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~--~~~~~~~~~~~~----------~~~~ 224 (285)
T cd05605 158 -IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV--KREEVERRVKED----------QEEY 224 (285)
T ss_pred -cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh--HHHHHHHHhhhc----------cccc
Confidence 123578999999999999999999999999999999999999985432211 001110000000 0112
Q ss_pred CHHHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
+......+.+++..||+.||++|| ++.++++.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 223455678899999999999999 77787654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=265.93 Aligned_cols=233 Identities=21% Similarity=0.302 Sum_probs=168.7
Q ss_pred CcceeeeeccccceeEEeeeec----CCcEEEEEEeccCC----hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~~----~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~ 596 (823)
+|++.++||+|+||.||+++.. +++.||+|.+.+.. ....+.+.+|+.++.++ +||||+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788899999999999998753 47899999986431 22345688999999999 599999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++||||+++|+|..++...... |..+..||+....||+.+.++.+||+|||+++.......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~ 160 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK 160 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence 9999999999999888543211 222333444455667778899999999999986533221
Q ss_pred ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
.......||+.|||||++.+. .++.++|||||||++|||++|+.|+........ .......... .++
T Consensus 161 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~-------~~~--- 228 (332)
T cd05614 161 -ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILK-------CDP--- 228 (332)
T ss_pred -CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhc-------CCC---
Confidence 123346799999999999865 478999999999999999999999854322111 0001111100 011
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
..+......+.+++..||+.||++|| ++.++++.
T Consensus 229 -~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 229 -PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 11122344577899999999999999 66777654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-29 Score=267.15 Aligned_cols=233 Identities=24% Similarity=0.370 Sum_probs=177.0
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEec--cCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS--NQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~--~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~ 600 (823)
...|++.++||+||.+.||++...+.+.+|+|++. ..+.+....|++|+.+|.+++ |.+||+|++|-..++.+||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 35688899999999999999998888899999875 345677889999999999995 999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCH------HHHHHHH-----hcccc---------ccCCCceeceeeceeecCCCccccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGW------QLRVRII-----DGIAQ---------DQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~------~~r~~i~-----~~ia~---------d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||- .-+|...|...... ..+| ...++++ ++|.+ --.|.+||.|||+|+.+..+.+...
T Consensus 440 E~G-d~DL~kiL~k~~~~-~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~ 517 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSI-DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIV 517 (677)
T ss_pred ecc-cccHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCcccccee
Confidence 986 45888888654332 2223 2333332 23333 2356789999999999988877766
Q ss_pred cccccccccccccccccCC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccc
Q 003402 661 TKRIVGTYGYMSPEYALEG-----------VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~-----------~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 729 (823)
....+||+.||+||.+... +++.+|||||+|||||+|+.|+.||+.+.. . + .++..
T Consensus 518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n----~--~-------aKl~a 584 (677)
T KOG0596|consen 518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN----Q--I-------AKLHA 584 (677)
T ss_pred eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH----H--H-------HHHHh
Confidence 6778999999999988532 256899999999999999999999863321 1 1 12344
Q ss_pred ccCcccccCCCH-HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 730 LMDPVLQNEVSL-PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 730 l~d~~l~~~~~~-~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.||...-+++. +.-.+++++|..||+.||.+||+..+|++.
T Consensus 585 I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 445533222221 122338999999999999999999999884
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=254.97 Aligned_cols=230 Identities=19% Similarity=0.297 Sum_probs=171.2
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+.|+..++||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++||||+++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 34677789999999999999875 47899999987542 34567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCccc------------------ccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccc
Q 003402 603 MVNKSLDVFLFDPTKKH------------------LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRI 664 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~------------------~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~ 664 (823)
+++++|.+++....... .....|+...+.+|..+.++.+||+|||++..+..... .....
T Consensus 84 ~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~ 161 (277)
T cd06640 84 LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTF 161 (277)
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc--ccccc
Confidence 99999999885422110 01111111222344457788899999999987654322 12235
Q ss_pred cccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHH
Q 003402 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744 (823)
Q Consensus 665 ~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~ 744 (823)
.++..|+|||++.+..++.++|||||||++|||++|+.|+....... .. ..+.............
T Consensus 162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~ 226 (277)
T cd06640 162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--VL-------------FLIPKNNPPTLTGEFS 226 (277)
T ss_pred cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--Hh-------------hhhhcCCCCCCchhhh
Confidence 68899999999998899999999999999999999999875332110 00 0000011112233455
Q ss_pred HHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 745 VRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 745 ~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+.+++..||+.+|++||++.++++.
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 227 KPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 678899999999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=266.05 Aligned_cols=228 Identities=19% Similarity=0.293 Sum_probs=164.9
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
+.||+|+||.||+++... ++.||+|.+++. .....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 479999999999998754 789999999753 233445688899988877 899999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |...+.|++..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~~~~g 158 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCG 158 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--CccccccC
Confidence 9998877542211 11223334444556666889999999999998542221 12234679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC---ccchhHHHHhhccCCccccccCcccccCCCHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD---SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~ 743 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+...... ......+......... ...+...
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~----------~~~p~~~ 228 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ----------IRIPRSL 228 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC----------CCCCCCC
Confidence 99999999999999999999999999999999999998532211 1111111111111111 0122233
Q ss_pred HHHHHHHHHHccccCcCCCCC------HHHHHH
Q 003402 744 LVRYINVALLCVQENAEDRPT------MSDVVS 770 (823)
Q Consensus 744 ~~~~~~l~~~Cl~~dP~~RPt------~~evl~ 770 (823)
...+.+++..||+.||++||+ +.+++.
T Consensus 229 ~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 229 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred CHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 456778999999999999998 456654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=259.67 Aligned_cols=225 Identities=20% Similarity=0.354 Sum_probs=168.0
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4666789999999999999865 47899999987432 344567999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++.... +.+.....+ +.+|..++++.+||+|||+++.+..... ..
T Consensus 85 ~~~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~ 158 (277)
T cd06642 85 GGGSALDLLKPGP----LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KR 158 (277)
T ss_pred CCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch--hh
Confidence 9999998885422 223222222 2333446788899999999987643321 12
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....|+..|+|||++.+..++.++|||||||++|||++|+.|+....... .. .. ..... .+ ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~---~~-~~~~~-----~~----~~~~ 223 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VL---FL-IPKNS-----PP----TLEG 223 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HH---hh-hhcCC-----CC----CCCc
Confidence 23568999999999999899999999999999999999999874322111 00 00 00000 11 1112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++..||+.+|++||+|.+|+++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 234567889999999999999999999985
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=284.93 Aligned_cols=239 Identities=21% Similarity=0.254 Sum_probs=174.1
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+|+... ++.||||++.... ....++|.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 468899999999999999998754 8899999997532 233467999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCc--------c----------------------cccCHHHHHHHHhccccccCCCceeceeecee
Q 003402 601 EYMVNKSLDVFLFDPTK--------K----------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~--------~----------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~ 650 (823)
||+++|+|.+++..... . |..+..||+..+.||..+.++.+||+|||+++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 99999999988753110 0 11233344445566667888999999999998
Q ss_pred ecCCCcc----------------ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch
Q 003402 651 MFGGDEL----------------QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL 714 (823)
Q Consensus 651 ~~~~~~~----------------~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l 714 (823)
....... .......+||+.|||||.+.+..++.++|||||||++|||+||+.|+.........
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~- 240 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS- 240 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh-
Confidence 7622110 00112357999999999999999999999999999999999999998542211100
Q ss_pred hHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCC-CHHHHHHHHhccc
Q 003402 715 LGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRP-TMSDVVSMINNEL 776 (823)
Q Consensus 715 ~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~ 776 (823)
. . ..+.++... .........+.+++.+|++.||++|| ++.++.+.|+..+
T Consensus 241 --~--~-------~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 241 --Y--R-------DVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred --h--h-------hhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 0 000111000 00112334577899999999999995 5677777776643
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-28 Score=267.65 Aligned_cols=223 Identities=23% Similarity=0.292 Sum_probs=165.3
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+|+... ++.||||.++.. .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 469999999999998764 789999998753 223445688899998876 799999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.|++..+.||..+.++.+||+|||+++...... .......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g 158 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTTTTFCG 158 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC--cccccccc
Confidence 9998877533211 22233444445566667889999999999998643222 12234679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+...... .... ...... . ..+......
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--~~~~---~i~~~~----~-------~~p~~~~~~ 222 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--DLFE---SILHDD----V-------LYPVWLSKE 222 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--HHHH---HHHcCC----C-------CCCCCCCHH
Confidence 99999999999999999999999999999999999998533211 1111 111110 0 011112356
Q ss_pred HHHHHHHccccCcCCCC-------CHHHHHHH
Q 003402 747 YINVALLCVQENAEDRP-------TMSDVVSM 771 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RP-------t~~evl~~ 771 (823)
+.+++..|++.||++|| ++.++++.
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 77899999999999999 77887754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=253.41 Aligned_cols=231 Identities=23% Similarity=0.359 Sum_probs=167.5
Q ss_pred CcceeeeeccccceeEEeeeecC--CcEEEEEEeccC----------ChhhHHHHHHHHHHHHh-cCCCceeeEEeEEEe
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQ----------SGQGLKEFKNEMMLIAK-LQHRNLVRLLGCCIE 592 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~--~~~VAVK~l~~~----------~~~~~~~f~~Ev~~l~~-l~H~Niv~l~g~~~~ 592 (823)
+|++.+.||+|+||.||+|.... ++.+|||.+... ......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46778999999999999999765 678999987532 22334568889998875 799999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCC-CcccccCHHHHH-----------------------HHHhccccccCCCceeceeec
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDP-TKKHLLGWQLRV-----------------------RIIDGIAQDQHMNPKISDFGM 648 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~r~-----------------------~i~~~ia~d~~~~~KI~DFGl 648 (823)
++..++||||+++++|.+++... .....+...... ..+.+|..+.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 99999999999999998877421 111122222222 222334446777899999999
Q ss_pred eeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 649 ARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 649 a~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.|+..... ........ ...
T Consensus 161 ~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----~~~~~~~~-~~~-- 229 (269)
T cd08528 161 AKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----LSLATKIV-EAV-- 229 (269)
T ss_pred eeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----HHHHHHHh-hcc--
Confidence 98765432 22346789999999999999999999999999999999999998743211 11111111 110
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
..+... ......+.+++.+||+.||++||++.||..+++
T Consensus 230 --~~~~~~----~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 --YEPLPE----GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --CCcCCc----ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 011111 122356788999999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=256.14 Aligned_cols=231 Identities=28% Similarity=0.395 Sum_probs=162.5
Q ss_pred eeeccccceeEEeeeecC----CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCeEEEEEEccc
Q 003402 531 SKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE-QGEKILIYEYMV 604 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-~~~~~lV~Ey~~ 604 (823)
+.||+|+||.||+|...+ ...||+|++... .....+.+.+|+.+++.++||||+++++++.. ++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998642 357999998643 33456789999999999999999999998764 556889999999
Q ss_pred CCCchhhccCCCccc--------------------ccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc--cccc
Q 003402 605 NKSLDVFLFDPTKKH--------------------LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ--GNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~--------------------~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~--~~~~ 662 (823)
+|+|..++....... .....|+...+.+|+.+.++.+||+|||+++.+...... ....
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 160 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT 160 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence 999999986432110 111122222334455578889999999999865432211 1112
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
...++..|||||.+....++.++|||||||++|||++|+.|+... .+...+.... ...... ..+..
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~-~~~~~~~~~~---~~~~~~----------~~~~~ 226 (262)
T cd05058 161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-VDSFDITVYL---LQGRRL----------LQPEY 226 (262)
T ss_pred cCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHH---hcCCCC----------CCCCc
Confidence 345678899999999899999999999999999999965543211 1111111111 111000 00111
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+.+++..||+.+|++||++.+|++.|+..
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 234678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=262.42 Aligned_cols=237 Identities=25% Similarity=0.385 Sum_probs=172.8
Q ss_pred cCcceeeeeccccceeEEeeeecC--------CcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN--------GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQG 594 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~--------~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~ 594 (823)
.+|.+.+.||+|+||.||+++... ...||+|.++.. .....+++.+|+.++.++ +||||++++++|.+.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 458888999999999999997421 236999988753 234467899999999999 8999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHHH----------------------HhccccccCC
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRI----------------------IDGIAQDQHM 639 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i----------------------~~~ia~d~~~ 639 (823)
..++|+||+++|+|.+++..... ...+.+.....+ ..+|+.+.++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~ 171 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN 171 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence 99999999999999999864211 112344333222 3344446788
Q ss_pred CceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHH
Q 003402 640 NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHA 718 (823)
Q Consensus 640 ~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~ 718 (823)
.+||+|||+++.+.............++..|||||.+.+..++.++|||||||++|||++ |..|+.....+ .+ .
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~---~ 246 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--EL---F 246 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HH---H
Confidence 999999999987654332222233445678999999999999999999999999999998 77776432111 11 1
Q ss_pred HhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 719 WSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 719 ~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
... ...... ..+......+.+++..||+.+|++||+|.++++.|+...
T Consensus 247 ~~~-~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 247 KLL-KEGHRM---------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHH-HcCCCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 111 111100 112233456888999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=258.75 Aligned_cols=234 Identities=24% Similarity=0.336 Sum_probs=168.7
Q ss_pred cCcceeeeeccccceeEEeeeecC-C--cEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-G--QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~--~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.+.||+|+||.||+|...+ + ..+|+|.++.. .....+.|.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468888999999999999998754 3 35799988743 334457899999999999 799999999999999999999
Q ss_pred EEcccCCCchhhccCCCc-------------ccccCHHHHH----------------------HHHhccccccCCCceec
Q 003402 600 YEYMVNKSLDVFLFDPTK-------------KHLLGWQLRV----------------------RIIDGIAQDQHMNPKIS 644 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~ 644 (823)
+||+++++|.+++..... ...+.+.... ..+.+|+.+.+..+||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~ 161 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA 161 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence 999999999999854210 0113333322 22334445778889999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhcc
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
|||++...... ........+..|+|||++....++.++|||||||++|||++ |+.|+...... .+.. ...
T Consensus 162 dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~--~~~~----~~~ 232 (297)
T cd05089 162 DFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA--ELYE----KLP 232 (297)
T ss_pred CcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH----HHh
Confidence 99998743211 11111233567999999999999999999999999999998 88887432211 1111 111
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.+ .....+......+.+++..||+.+|.+||++.+++++|+...
T Consensus 233 ~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 233 QG---------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred cC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 001111223456788999999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=264.13 Aligned_cols=234 Identities=26% Similarity=0.373 Sum_probs=169.8
Q ss_pred cCcceeeeeccccceeEEeeeecC-Cc--EEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQ--EVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~--~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.+.||+|+||.||+|+... +. .+|+|.++.. .....++|.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 568888999999999999998753 43 5688887643 334556899999999999 899999999999999999999
Q ss_pred EEcccCCCchhhccCCCc-------------c----------------------cccCHHHHHHHHhccccccCCCceec
Q 003402 600 YEYMVNKSLDVFLFDPTK-------------K----------------------HLLGWQLRVRIIDGIAQDQHMNPKIS 644 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~-------------~----------------------~~l~~~~r~~i~~~ia~d~~~~~KI~ 644 (823)
+||+++++|.+++..... . |..+..|+...+.+|+.+.++.+||+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~ 166 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 166 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeC
Confidence 999999999998854221 0 11222333334455566788899999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhcc
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
|||+++.... ........++..|+|||++....++.++|||||||++|||+| |..|+...... ..... ..
T Consensus 167 dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~----~~ 237 (303)
T cd05088 167 DFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEK----LP 237 (303)
T ss_pred ccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHH----Hh
Confidence 9999974321 111112234678999999988889999999999999999998 88887432211 11111 01
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.. .....+......+.+++.+||+.+|++||++.+++++|+..+
T Consensus 238 ~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 238 QG---------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred cC---------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 10 000111123346788999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-28 Score=262.69 Aligned_cols=223 Identities=22% Similarity=0.265 Sum_probs=164.1
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
+.||+|+||+||+++... ++.||||.+++.. ....+.+.+|++++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999998764 7899999997532 23456678899999888 799999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.|+...+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VTTSTFCG 158 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--Ccccceec
Confidence 9998887543211 11222233333455666888999999999997532221 12234579
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+.. .. ..... ..+......
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~~---~i-~~~~~----------~~~~~~~~~ 222 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELFQ---SI-LEDEV----------RYPRWLSKE 222 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHHH---HH-HcCCC----------CCCCcCCHH
Confidence 9999999999999999999999999999999999999853221 11111 11 11100 111223456
Q ss_pred HHHHHHHccccCcCCCCCH-----HHHHHH
Q 003402 747 YINVALLCVQENAEDRPTM-----SDVVSM 771 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~-----~evl~~ 771 (823)
+.+++..||+.||.+||++ .++++.
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 7889999999999999999 887653
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=260.87 Aligned_cols=238 Identities=26% Similarity=0.396 Sum_probs=172.1
Q ss_pred hcCcceeeeeccccceeEEeeeec--------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL--------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ 593 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~--------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~ 593 (823)
.++|.+.++||+|+||.||+++.. ....+|+|.++.. .....+++.+|+.++.++ +||||+++++++.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 356888999999999999999742 2457999998753 234456799999999999 699999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHH----------------------HHhccccccC
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVR----------------------IIDGIAQDQH 638 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~----------------------i~~~ia~d~~ 638 (823)
+..++||||+++|+|..++..... ...+.+..... ...+|+.+++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 170 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED 170 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC
Confidence 999999999999999999854211 11233333222 2234444778
Q ss_pred CCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHH
Q 003402 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGH 717 (823)
Q Consensus 639 ~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~ 717 (823)
+.+||+|||+++...............++..|||||.+.+..++.++|||||||++|||++ |+.|+..... ..+..
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~- 247 (314)
T cd05099 171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--EELFK- 247 (314)
T ss_pred CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--HHHHH-
Confidence 8899999999987643322222222345578999999999999999999999999999999 7777643221 11111
Q ss_pred HHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 718 AWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 718 ~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
........ ..+......+.+++.+||+.+|++||++.++++.|+...
T Consensus 248 ---~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 248 ---LLREGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred ---HHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11111100 112223456778999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=261.90 Aligned_cols=222 Identities=22% Similarity=0.289 Sum_probs=160.0
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHh-cCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAK-LQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~-l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+|+..+ ++.||||.++... ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999998754 7899999987531 2334556677777765 4899999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.|++..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~g 158 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--CccccccC
Confidence 9998887543211 11222233334455666788999999999998653322 22334679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+.. ..... . ...+......
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--~~~~~---~i~~~-~----------~~~~~~~~~~ 222 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--DELFD---SILND-R----------PHFPRWISKE 222 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--HHHHH---HHHcC-C----------CCCCCCCCHH
Confidence 9999999999999999999999999999999999999853321 11111 11000 0 0111223345
Q ss_pred HHHHHHHccccCcCCCCCHH-HHHH
Q 003402 747 YINVALLCVQENAEDRPTMS-DVVS 770 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~-evl~ 770 (823)
+.+++..||+.||++||++. ++++
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHHc
Confidence 67889999999999999976 4543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=253.55 Aligned_cols=232 Identities=25% Similarity=0.367 Sum_probs=171.8
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.+.|++.++||+|+||.||++...++..+|+|.+... ....+.|.+|+.++++++|+||+++.+++.+ ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4678899999999999999999877888999988754 2345689999999999999999999999887 7789999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++..... ....+..+..++ .+|..+.++.+||+|||+++.+...... ..
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~ 160 (260)
T cd05073 83 AKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-AR 160 (260)
T ss_pred CCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-cc
Confidence 99999999865321 223333332222 3344467888999999999876433221 12
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....++..|+|||++....++.++|||||||++||+++ |+.|+..... ..+. .....+... ...
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~----~~~~~~~~~---------~~~ 225 (260)
T cd05073 161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVI----RALERGYRM---------PRP 225 (260)
T ss_pred cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHH----HHHhCCCCC---------CCc
Confidence 22356778999999998889999999999999999999 7877643211 1111 111111110 111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
......+.+++.+|++.+|++||++.++.++|+.
T Consensus 226 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 226 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2234568889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=241.86 Aligned_cols=228 Identities=24% Similarity=0.280 Sum_probs=180.6
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.++|++.+.||+|.||.||.|+.+. +-.||+|.+.+.. .+...++.+|+++-+.|+||||+++++++.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 3678999999999999999998754 6789999997542 23346899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 600 YEYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+||.++|+|...|.+.... |.....||+..+.|++.+..+..||+|||-+..-..
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~---- 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---- 176 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC----
Confidence 9999999999998732211 233445666677888889999999999999876432
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
....+.+||.-|.+||...+..++.++|+|++||+.||++.|.+||.....+ ..+.... ..++.
T Consensus 177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~------etYkrI~---k~~~~------- 240 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS------ETYKRIR---KVDLK------- 240 (281)
T ss_pred CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH------HHHHHHH---Hcccc-------
Confidence 2334689999999999999999999999999999999999999998543211 1111100 11111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++......+.+++..|+..+|.+|....||+..
T Consensus 241 ~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 241 FPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred CCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 223445567889999999999999999999875
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=256.81 Aligned_cols=232 Identities=21% Similarity=0.335 Sum_probs=173.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.+|.+.++||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 67888999999999999999864 68999999997655555677899999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 604 VNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
++++|.+++...... |..++.|+...+.||..+.++.+||+|||+++........ .....
T Consensus 99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~ 176 (297)
T cd06656 99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMV 176 (297)
T ss_pred CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC--cCccc
Confidence 999999988542211 1112223333344555678889999999999876443221 22356
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
|++.|+|||.+.+..++.++|||||||++||+++|+.|+........ + ......+ . +.+ ..+.....
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-~----~~~~~~~-~-----~~~--~~~~~~~~ 243 (297)
T cd06656 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L----YLIATNG-T-----PEL--QNPERLSA 243 (297)
T ss_pred CCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-e----eeeccCC-C-----CCC--CCccccCH
Confidence 89999999999999999999999999999999999999853221110 0 0000000 0 000 01122334
Q ss_pred HHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 746 RYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.+++..||+.+|++||++.+|++.
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 56789999999999999999999884
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=266.59 Aligned_cols=217 Identities=23% Similarity=0.309 Sum_probs=160.3
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+++... ++.||||.+++. .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999998764 789999998743 223456778899988876 699999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..+..|++..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~~~~~~g 158 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTTSTFCG 158 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Cccccccc
Confidence 9998887543211 11222333344455666889999999999998643221 12234679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+...... .+... . ..+. . ..+......
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~~~~---i-~~~~---~-------~~~~~~~~~ 222 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--DLFEA---I-LNDE---V-------VYPTWLSQD 222 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHH---H-hcCC---C-------CCCCCCCHH
Confidence 99999999999999999999999999999999999998533211 11111 1 1110 0 011123456
Q ss_pred HHHHHHHccccCcCCCCCH
Q 003402 747 YINVALLCVQENAEDRPTM 765 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~ 765 (823)
+.+++..|++.||++||++
T Consensus 223 ~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHcccCHHHCCCC
Confidence 7889999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=252.22 Aligned_cols=227 Identities=20% Similarity=0.362 Sum_probs=170.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.+.||.|+||.||+|+.. +++.||+|.+.... ....+.+.+|+.++++++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 35778899999999999999875 48899999987543 34456789999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++... .+.+.....+ +.+|..++++.++|+|||+++.+.... ..
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~ 154 (274)
T cd06609 81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--SK 154 (274)
T ss_pred eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--cc
Confidence 9999999998653 2222222222 223344678899999999998875432 12
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....|++.|+|||++.+..++.++|||||||++|||++|+.|+...... ... ... ..... +.+...
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~~~---~~~-~~~~~-----~~~~~~-- 221 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--RVL---FLI-PKNNP-----PSLEGN-- 221 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--HHH---HHh-hhcCC-----CCCccc--
Confidence 23457899999999999989999999999999999999999998533211 110 000 11101 111110
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++..||+.+|++||+++++++.
T Consensus 222 -~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 222 -KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 134457789999999999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=256.54 Aligned_cols=225 Identities=19% Similarity=0.245 Sum_probs=162.9
Q ss_pred eccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 533 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
||+|+||+||++... +++.||||.+.... ....+.+..|+.++++++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999875 58899999986432 22346788999999999999999999999999999999999999999
Q ss_pred hhhccCCC-cccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 609 DVFLFDPT-KKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 609 ~~~l~~~~-~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
..++.... ....+.+... +..+.||..+.++.+||+|||+++.+..... ......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~ 158 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTKGYA 158 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--cccccC
Confidence 88774321 1112233222 2223344457788999999999987644322 223457
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
||+.|||||.+.+..++.++|||||||++|||++|+.|+........ ....... +.... ...+.....
T Consensus 159 g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~---------~~~~~--~~~~~~~~~ 226 (280)
T cd05608 159 GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQR---------ILNDS--VTYPDKFSP 226 (280)
T ss_pred CCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHHHh---------hcccC--CCCcccCCH
Confidence 99999999999999999999999999999999999999854322110 0000000 00000 011223455
Q ss_pred HHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 746 RYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
.+.+++..||+.||++|| ++++++++
T Consensus 227 ~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 227 ASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 678899999999999999 66777653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=261.56 Aligned_cols=221 Identities=21% Similarity=0.269 Sum_probs=162.5
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+|+... ++.||||.++... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 479999999999998764 7899999997532 23345677788888764 899999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRASTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--CceeccCC
Confidence 9998887543211 22334445555566777889999999999997532111 12234679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+.... ... .+ ..+......
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~~~~----~~~------~~----~~~~~~~~~ 222 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELFESI----RVD------TP----HYPRWITKE 222 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHH----HhC------CC----CCCCCCCHH
Confidence 9999999999999999999999999999999999999853221 1111111 100 01 111123346
Q ss_pred HHHHHHHccccCcCCCCCHH-HHH
Q 003402 747 YINVALLCVQENAEDRPTMS-DVV 769 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~-evl 769 (823)
+.+++..||+.||++||++. ++.
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHH
Confidence 77899999999999999985 555
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-28 Score=265.26 Aligned_cols=222 Identities=22% Similarity=0.271 Sum_probs=164.2
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+|.+.++||+|+||.||+|+... ++.||||.+.+.. ....+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47788999999999999998764 7899999987532 22345677788888877 6899999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|..++...... |..+..||+..+.||+.+.++.+||+|||+++....... ..
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~--~~ 158 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV--TT 158 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC--cc
Confidence 999999998887543211 112223344445566668899999999999986432221 22
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||++....++.++|||||||++|||++|+.|+...... .+... ... .. ...+.
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~---i~~-~~----------~~~p~ 222 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQS---IME-HN----------VAYPK 222 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHH---HHh-CC----------CCCCC
Confidence 3467999999999999999999999999999999999999998543211 11111 111 00 01122
Q ss_pred HHHHHHHHHHHHccccCcCCCCCH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
.....+.+++..|++.||++|++.
T Consensus 223 ~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 223 SMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred cCCHHHHHHHHHHcccCHHhcCCC
Confidence 334567889999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-28 Score=264.41 Aligned_cols=228 Identities=18% Similarity=0.283 Sum_probs=164.4
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+++.. +++.||||.+++. .....+.+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999875 4789999999753 223445688999999998 799999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.|++..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g 158 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DTTSTFCG 158 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--CccccccC
Confidence 9998877532211 11222333334455566788999999999997532211 12234689
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC---ccchhHHHHhhccCCccccccCcccccCCCHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD---SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~ 743 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+...... ......+......... . ..+...
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~p~~~ 228 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--------I--RIPRSL 228 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--------C--CCCCCC
Confidence 99999999999999999999999999999999999998533211 1111111111111110 0 112223
Q ss_pred HHHHHHHHHHccccCcCCCCC------HHHHHH
Q 003402 744 LVRYINVALLCVQENAEDRPT------MSDVVS 770 (823)
Q Consensus 744 ~~~~~~l~~~Cl~~dP~~RPt------~~evl~ 770 (823)
...+.+++..|++.||.+||+ +.++++
T Consensus 229 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 229 SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 456788999999999999998 567664
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=251.56 Aligned_cols=227 Identities=26% Similarity=0.334 Sum_probs=167.4
Q ss_pred eeeccccceeEEeeeecC--C--cEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN--G--QEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~--~--~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+|.+.+ + ..||||.++.... ...++|.+|+.++++++||||+++++.+.+ ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 478999999999998754 2 3699999987655 566789999999999999999999999988 899999999999
Q ss_pred CCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCCcc-ccccc
Q 003402 606 KSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGDEL-QGNTK 662 (823)
Q Consensus 606 gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~~~-~~~~~ 662 (823)
++|.+++..... ..+.+.... ..+.+|+.+.++.+||+|||+++.+..... .....
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 999999865432 223333322 222344446788999999999987754321 12222
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++..|+|||++....++.++|||||||++|||++ |+.|+...... ....... .... .. ..+.
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~---~~~~--~~-------~~~~ 224 (257)
T cd05040 159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKID---KEGE--RL-------ERPE 224 (257)
T ss_pred CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH---hcCC--cC-------CCCc
Confidence 3567889999999999999999999999999999999 99887432111 1111111 0000 00 0111
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.....+.+++..|++.+|++||++.+|++.|.
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 23456888999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-28 Score=271.87 Aligned_cols=181 Identities=24% Similarity=0.326 Sum_probs=144.7
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.|+..++||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++|||||++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999875 47899999997532 2345678999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc------
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE------ 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~------ 656 (823)
|+++|+|..++...... |..+..||+..+.||+.+.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 99999999888543211 22334445555667777899999999999986431100
Q ss_pred ---------------------------------------cccccccccccccccccccccCCCCCchhhHHHHHHHHHHH
Q 003402 657 ---------------------------------------LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697 (823)
Q Consensus 657 ---------------------------------------~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~El 697 (823)
........+||+.|||||++.+..++.++|||||||+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 00011235799999999999999999999999999999999
Q ss_pred HhCCCCCCC
Q 003402 698 LSSKKNTGV 706 (823)
Q Consensus 698 ltg~~p~~~ 706 (823)
++|+.||..
T Consensus 242 ltG~~Pf~~ 250 (382)
T cd05625 242 LVGQPPFLA 250 (382)
T ss_pred HhCCCCCCC
Confidence 999999854
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=272.68 Aligned_cols=234 Identities=24% Similarity=0.278 Sum_probs=168.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.++||+|+||.||+++.. +++.||||.+.+. .....+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999865 5889999998643 2234567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc----
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL---- 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~---- 657 (823)
||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999999999888542211 233445555666777778899999999999964321000
Q ss_pred ---------c--------------------------------cccccccccccccccccccCCCCCchhhHHHHHHHHHH
Q 003402 658 ---------Q--------------------------------GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLE 696 (823)
Q Consensus 658 ---------~--------------------------------~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~E 696 (823)
. ......+||+.|||||++.+..++.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (377)
T cd05629 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240 (377)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence 0 00012469999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCC---CCHHHHHHH
Q 003402 697 ILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDR---PTMSDVVSM 771 (823)
Q Consensus 697 lltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~R---Pt~~evl~~ 771 (823)
|++|+.||...... .... ..........+ + . .......+.+++..|++ +|.+| |++.|++.+
T Consensus 241 lltG~~Pf~~~~~~--~~~~---~i~~~~~~~~~--p---~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 241 CLIGWPPFCSENSH--ETYR---KIINWRETLYF--P---D--DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhcCCCCCCCCCHH--HHHH---HHHccCCccCC--C---C--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 99999998533211 1111 11110000000 0 0 01123456778888887 66665 699998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=271.39 Aligned_cols=238 Identities=19% Similarity=0.236 Sum_probs=171.7
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
....++|++.++||+|+||.||+++... ++.||+|.+.+. .....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 3345789999999999999999998764 789999998642 222345688999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
++||||+++|+|.+++...... |.....||+..+.||+.+.++.+||+|||+|+.+.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~- 197 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM- 197 (370)
T ss_pred EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc-
Confidence 9999999999999988543211 223344455556677778999999999999987643321
Q ss_pred cccccccccccccccccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 659 GNTKRIVGTYGYMSPEYALEG----VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~----~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.......||+.|||||++... .++.++|||||||++|||++|+.||..... ...............
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-----~~~~~~i~~~~~~~~----- 267 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-----VGTYSKIMDHKNSLN----- 267 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCcccC-----
Confidence 122346799999999998754 378999999999999999999999853221 111111111110000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCC--CCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAED--RPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~ 771 (823)
-.........+.+++..|++.++.+ ||++.|++++
T Consensus 268 --~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 --FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred --CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0011122445667778888755543 8899999886
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=254.30 Aligned_cols=229 Identities=30% Similarity=0.440 Sum_probs=165.9
Q ss_pred eeeccccceeEEeeeecC-------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 531 SKLGEGGFGPVYKGRLLN-------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+.||+|+||.||+|+..+ ++.||||.+.... .....+|.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999998643 2579999886543 23456899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc----ccccCHHHHHHHHhc----------------------cccccCC-----Cceeceeeceee
Q 003402 603 MVNKSLDVFLFDPTK----KHLLGWQLRVRIIDG----------------------IAQDQHM-----NPKISDFGMARM 651 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~----~~~l~~~~r~~i~~~----------------------ia~d~~~-----~~KI~DFGla~~ 651 (823)
+++++|.+++..... ...+.+.....++.+ |+.+.+. .+||+|||+++.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999999864221 112344433333322 2224444 799999999987
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
+.............++..|+|||++.++.++.++|||||||++|||++ |+.|+..... ...... . ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~---~-~~~~---- 230 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQH---V-TAGG---- 230 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHH---H-hcCC----
Confidence 654433322333456789999999999999999999999999999998 8888743211 111111 1 1100
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
....+......+.+++.+||+.+|.+||++.+|+++|++
T Consensus 231 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 -----RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred -----ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 001112234567889999999999999999999999863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=253.52 Aligned_cols=231 Identities=23% Similarity=0.322 Sum_probs=160.4
Q ss_pred eeeccccceeEEeeeecC---CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 531 SKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~---~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
++||+|+||.||+|+..+ ...+|+|.+.... .....+|.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 369999999999997644 3578999876443 334567899999999999999999999999999999999999999
Q ss_pred CchhhccCCCcc------------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 607 SLDVFLFDPTKK------------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 607 sL~~~l~~~~~~------------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|.+++...... |.....|++....||..+.++.+||+|||+++....+.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD 160 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence 999998643211 11122233334455566888999999999997643332222223
Q ss_pred cccccccccccccccC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 663 RIVGTYGYMSPEYALE-------GVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~-------~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
...+++.|+|||++.. ..++.++|||||||++|||++ |+.|+..... ...... ..... ...+.++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~---~~~~~-~~~~~~~~ 234 (269)
T cd05042 161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD--EQVLKQ---VVREQ-DIKLPKPQ 234 (269)
T ss_pred CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHH---Hhhcc-CccCCCCc
Confidence 3456788999998743 456889999999999999999 6666643211 111111 11111 11222222
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
+ +......+.+++..||. ||++||++++|+++|
T Consensus 235 ~----~~~~~~~~~~~~~~~~~-dp~~Rpt~~~v~~~l 267 (269)
T cd05042 235 L----DLKYSDRWYEVMQFCWL-DPETRPTAEEVHELL 267 (269)
T ss_pred c----cccCCHHHHHHHHHHhc-CcccccCHHHHHHHh
Confidence 2 22233456677888984 999999999999987
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=253.15 Aligned_cols=226 Identities=30% Similarity=0.382 Sum_probs=165.0
Q ss_pred eeeccccceeEEeeeecC----CcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+|++.. +..+|+|.+..... ...+++.+|+.+++++.|||||++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999997643 26899999875543 34568999999999999999999999876 5568999999999
Q ss_pred CCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccc-cccc
Q 003402 606 KSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQ-GNTK 662 (823)
Q Consensus 606 gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~-~~~~ 662 (823)
|+|.+++.... .+.+..+.. .+.+|..+.++.+||+|||+++.+...... ....
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 99999986533 223333222 233444577889999999999876433221 1112
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...++..|+|||.+....++.++|||||||++|||++ |+.|+..... ..+.... ...... ..+.
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~----~~~~~~---------~~~~ 221 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAML----ESGERL---------PRPE 221 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH----HcCCcC---------CCCC
Confidence 2334678999999999999999999999999999998 8888754322 1111111 111100 1112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.....+.+++.+||+.+|++||++.+|++.|++.
T Consensus 222 ~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 222 ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 2345678899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=252.37 Aligned_cols=228 Identities=22% Similarity=0.359 Sum_probs=170.8
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
++|++.++||+|+||.||+|...+ ++.+|+|.++.... .+++.+|++++++++||||+++++++.+....++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578888999999999999999865 78999999975432 678999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++.... ..+.+.....++ .+|..+.++.+||+|||++..+..... ..
T Consensus 81 ~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~ 156 (256)
T cd06612 81 GAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--KR 156 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--cc
Confidence 9999999885422 223333332222 233446788899999999987643321 22
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....|+..|+|||.+.+..++.++|||||||++|||++|+.|+........ .... ... ..+.. ..+.
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-----~~~~-~~~-----~~~~~--~~~~ 223 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-----IFMI-PNK-----PPPTL--SDPE 223 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-----hhhh-ccC-----CCCCC--Cchh
Confidence 235689999999999998999999999999999999999999753321110 0000 000 00000 1112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++..||+.||++||++.||++.
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 234567889999999999999999999863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-28 Score=264.00 Aligned_cols=222 Identities=20% Similarity=0.249 Sum_probs=164.0
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCC-CceeeEEeEEEeCCeEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQH-RNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H-~Niv~l~g~~~~~~~~~lV~ 600 (823)
+|++.+.||+|+||.||+|+..+ ++.||||.+... .....+.+..|++++..++| ++|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47888999999999999998764 689999999753 22345678899999999976 46889999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|..++...... |..++.|++..+.||+.+.++.+||+|||+++...... ...
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~ 158 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG--KTT 158 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC--Cce
Confidence 999999998887543211 12233344444556666888999999999997532211 122
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|+|||++.+..++.++|||||||++|||++|+.|+..... ..+... ... .. ...+.
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~---i~~-~~----------~~~~~ 222 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DELFQS---IME-HN----------VSYPK 222 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHH---HHc-CC----------CCCCC
Confidence 346799999999999999999999999999999999999999853321 111111 100 00 01112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
.....+.+++..||+.||.+||+.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 223 SLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 234567789999999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=252.29 Aligned_cols=235 Identities=20% Similarity=0.367 Sum_probs=169.8
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||.||+|+.. +++.||+|.++.........+.+|+.++..++||||+++++.+.+.+..++|+||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 356888899999999999999865 4889999998765545556788999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
+++++|.+++...... |..+..|+...+.+|..+.++.+||+|||++..+.... .....
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~ 165 (267)
T cd06645 88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI--AKRKS 165 (267)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--ccccc
Confidence 9999999987543211 11122222333345555778899999999998764321 12234
Q ss_pred cccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 664 IVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
..|++.|+|||++. ...++.++|||||||++|||++|+.|+....... ... ...... ...+.....
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-~~~----~~~~~~----~~~~~~~~~-- 234 (267)
T cd06645 166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-ALF----LMTKSN----FQPPKLKDK-- 234 (267)
T ss_pred ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-hHH----hhhccC----CCCCccccc--
Confidence 57999999999874 4568999999999999999999999874322111 000 000000 000111110
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..|++.+|++||++.+|+++
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 235 MKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 1123457789999999999999999998763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-28 Score=260.54 Aligned_cols=236 Identities=26% Similarity=0.390 Sum_probs=169.0
Q ss_pred hcCcceeeeeccccceeEEeeeecC-Cc----EEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
.++|+..+.||+|+||.||+|.... +. .||+|.+..... ....++.+|+.++++++||||++++|+|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 3567788999999999999998643 43 579998875432 3345789999999999999999999999764 467
Q ss_pred EEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+++||+++|+|.+++...... |..+..|+.....+|+.+.+..+||+|||+++.+.....
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 164 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 164 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCccc
Confidence 899999999999988643211 111222333334455557788899999999987654332
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
........++..|||||++.+..++.++|||||||++|||++ |+.|+...... .. ......+.. .
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~----~~~~~~~~~--~------ 230 (303)
T cd05110 165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EI----PDLLEKGER--L------ 230 (303)
T ss_pred ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HH----HHHHHCCCC--C------
Confidence 222233456789999999999999999999999999999998 88887432111 11 111111110 0
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+......+..++..||..+|++||+|.+|+++|+..
T Consensus 231 -~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 231 -PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00111234678899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=250.09 Aligned_cols=229 Identities=22% Similarity=0.309 Sum_probs=171.0
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|+..+.||+|+||.||.++.. +++.+++|.+... .....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4788899999999999998764 4789999998643 344567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++.... ...+.+... ...+.+|..+.++.+||+|||+++....... .
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~ 157 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--M 157 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc--c
Confidence 99999999886532 112222222 2223344447788899999999987644332 2
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.|+..... ........ .+... ...
T Consensus 158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~-~~~~~---------~~~ 222 (256)
T cd08221 158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIV-QGNYT---------PVV 222 (256)
T ss_pred ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHH-cCCCC---------CCc
Confidence 2345789999999999988899999999999999999999998743211 11111111 11110 011
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
......+.+++..||+.+|++||++.++++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 22345678899999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=255.52 Aligned_cols=239 Identities=21% Similarity=0.264 Sum_probs=169.2
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||++... ++..+|+|.+... .....+++.+|++++.+++||||+++++++.++++.++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999875 4788999988654 233446789999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHH-----------------------HHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQ-----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~-----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
+++++|.+++..... +... |+.....+|+.+.++.+||+|||+++.+...
T Consensus 81 ~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 153 (308)
T cd06615 81 MDGGSLDQVLKKAGR---IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 153 (308)
T ss_pred cCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc----
Confidence 999999999854321 1221 1222233444567888999999999765322
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc-------------
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR------------- 726 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~------------- 726 (823)
......|++.|+|||.+.+..++.++|||||||++|||++|+.|+...... ..............
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCCCC
Confidence 123467899999999998888999999999999999999999997432211 11000000000000
Q ss_pred -------cccccCcccc---cCC-CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 727 -------AHELMDPVLQ---NEV-SLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 727 -------~~~l~d~~l~---~~~-~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
..++.+.... ... .......+.+++.+||+.+|++||++.+|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000000 000 011344688999999999999999999998863
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=257.69 Aligned_cols=228 Identities=20% Similarity=0.344 Sum_probs=172.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.+|+..++||.|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++.+.+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 46889999999999999999864 58999999997655555678999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|..++.... +.+..+.. .+.+|..+.++.+||+|||+++.+..... ..
T Consensus 99 ~~~~L~~~~~~~~----l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~~ 172 (296)
T cd06655 99 AGGSLTDVVTETC----MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--KR 172 (296)
T ss_pred CCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--cC
Confidence 9999999885432 23333322 23344557888999999999987644322 12
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....|+..|||||.+.+..++.++|||||||++|||++|+.|+....... ......... ...+ ..+.
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-----~~~~~~~~~-~~~~-------~~~~ 239 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-----ALYLIATNG-TPEL-------QNPE 239 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhcC-Cccc-------CCcc
Confidence 23578999999999999899999999999999999999999975432110 000110100 0000 0111
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++.+||+.||++||++.+|++.
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 223457788999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=252.46 Aligned_cols=232 Identities=22% Similarity=0.325 Sum_probs=168.5
Q ss_pred CcceeeeeccccceeEEeeeecCCcEEEEEEeccCC------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS------GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~------~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
+|...+.||+|+||.||+|...+++.+|||.++... ....+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 366778999999999999998888999999886432 12335689999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc-c------------------ccCHHHHHHHHhccccccCCCceeceeeceeecCCCc----
Q 003402 600 YEYMVNKSLDVFLFDPTKK-H------------------LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE---- 656 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~-~------------------~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~---- 656 (823)
+||+++++|.+++...... . .....|+.....+|+.++++.+||+|||+++......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT 160 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence 9999999999998643211 0 0111122222344555788899999999998653211
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
.........|+..|+|||++.+..++.++|||||||++|||++|+.|+....... ........ ... .+
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~~~---~~~-~~--- 228 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-----AMFYIGAH---RGL-MP--- 228 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-----HHHHhhhc---cCC-CC---
Confidence 1112234578999999999999899999999999999999999999985322110 00000000 000 01
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+......+.+++.+||+.+|++||++.++++
T Consensus 229 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 229 -RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 112233456788999999999999999999876
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-28 Score=258.06 Aligned_cols=232 Identities=24% Similarity=0.320 Sum_probs=170.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||+||++... +++.||+|.+.... ....+.|.+|++++..++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56788899999999999999875 48899999886542 34457899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHH-----------------------HHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQ-----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~-----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
+++++|..++..... +.+. |+.....+|+.+.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---- 157 (284)
T cd06620 85 MDCGSLDRIYKKGGP---IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---- 157 (284)
T ss_pred CCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh----
Confidence 999999988754221 1222 2222233444567888999999998765322
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc------cchhHHHHhhccCCccccccCc
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS------FNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~------~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
......|+..|+|||++.+..++.++|||||||++|||++|+.|+....... ..+........... .+
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 231 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------PP 231 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------CC
Confidence 1224579999999999988899999999999999999999999986443211 11111111111000 00
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
.+ ........+.+++.+||+.||++||++.||+++.
T Consensus 232 ~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 232 RL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred CC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00 0111345678899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=262.36 Aligned_cols=222 Identities=23% Similarity=0.296 Sum_probs=161.4
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHh-cCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAK-LQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~-l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
+.||+|+||.||+|+... ++.||||.++... ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 479999999999998765 7899999997532 2334567778888876 4999999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.|++..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AKTCTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--CceeeecC
Confidence 9999888543211 11222333334455556788899999999998542221 12334679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+.... ... .+. .+......
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i----~~~------~~~----~~~~~~~~ 222 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSI----RMD------NPC----YPRWLTRE 222 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHH----HhC------CCC----CCccCCHH
Confidence 9999999999999999999999999999999999999853321 1111111 000 011 11122345
Q ss_pred HHHHHHHccccCcCCCCCHH-HHHH
Q 003402 747 YINVALLCVQENAEDRPTMS-DVVS 770 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~-evl~ 770 (823)
+.+++..||+.||++||++. ++.+
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHHc
Confidence 77899999999999999997 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=251.67 Aligned_cols=226 Identities=26% Similarity=0.386 Sum_probs=166.6
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE-QGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-~~~~~lV~Ey~ 603 (823)
++|.+.+.||+|+||.||++... +..||+|.++... ..+.|.+|+.++++++|+|++++++++.+ ++..++|+||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888899999999999999774 7789999986532 34679999999999999999999998654 56789999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++..... ..+.+..... .+.+|..++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----- 156 (256)
T cd05082 83 AKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 156 (256)
T ss_pred CCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC-----
Confidence 99999999864322 1123332222 2234444788899999999998653321
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....++..|||||++....++.++|||||||++|||++ |+.|+.... +....... ..+.. ....
T Consensus 157 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~~-~~~~~---------~~~~ 221 (256)
T cd05082 157 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRV-EKGYK---------MDAP 221 (256)
T ss_pred CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH-hcCCC---------CCCC
Confidence 12345678999999999899999999999999999998 888764221 11111111 11100 0111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
......+.+++..||+.+|++|||+.++++.|+.
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 2234567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=248.81 Aligned_cols=228 Identities=33% Similarity=0.466 Sum_probs=171.0
Q ss_pred eeeccccceeEEeeeecC----CcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+++... +..||||.+...... ..+.+.+|++++.+++|+||+++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 479999999999998764 788999999765433 367899999999999999999999999999999999999999
Q ss_pred CCchhhccCCCc------ccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcc
Q 003402 606 KSLDVFLFDPTK------KHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 606 gsL~~~l~~~~~------~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++|.+++..... ...+.+..... .+.+|..+.++.+||+|||+++.......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 999999876411 12233333222 23344457789999999999988765432
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
........+++.|+|||.+....++.++||||||+++|||++ |+.|+..... ..+.. ....+. .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~----~~~~~~---------~ 225 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLE----YLRKGY---------R 225 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHH----HHHcCC---------C
Confidence 233344678899999999998899999999999999999999 5888754321 11111 111110 0
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
...+.....++.+++..||+.+|++||++.|++.+|+
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0112223467888999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=271.85 Aligned_cols=233 Identities=20% Similarity=0.242 Sum_probs=165.4
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
+|++.++||+|+||.||+++.. +++.||||.+.+.. ....+.+.+|+.++.+++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6889999999999999999865 48899999986432 2234668899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc------
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE------ 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~------ 656 (823)
|+++|+|.+++...... |..++.||+..+.||+.+.++.+||+|||+|+.+....
T Consensus 82 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~ 161 (376)
T cd05598 82 YIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (376)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccc
Confidence 99999999988643211 12233344444566667889999999999985331000
Q ss_pred -----------------------------------cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 003402 657 -----------------------------------LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701 (823)
Q Consensus 657 -----------------------------------~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~ 701 (823)
........+||+.|||||++.+..++.++|||||||++|||++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~ 241 (376)
T cd05598 162 KGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241 (376)
T ss_pred cccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence 000112357999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCC---CHHHHHHH
Q 003402 702 KNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRP---TMSDVVSM 771 (823)
Q Consensus 702 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RP---t~~evl~~ 771 (823)
.||....... ... ....... .+ ...........+.+++..|+ .+|.+|+ ++.++++.
T Consensus 242 ~Pf~~~~~~~--~~~---~i~~~~~--~~-----~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 242 PPFLADTPAE--TQL---KVINWET--TL-----HIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred CCCCCCCHHH--HHH---HHhccCc--cc-----cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 9985432211 100 0100000 00 00001112334455666655 4999999 88888764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=254.98 Aligned_cols=227 Identities=27% Similarity=0.376 Sum_probs=163.1
Q ss_pred eeeccccceeEEeeeecC-Cc--EEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQ--EVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~--~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
+.||+|+||.||+|+..+ +. .+|+|.++.. .....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 469999999999998754 33 5789988753 334556899999999999 899999999999999999999999999
Q ss_pred CCchhhccCCCc-------------ccccCHHHHH----------------------HHHhccccccCCCceeceeecee
Q 003402 606 KSLDVFLFDPTK-------------KHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 606 gsL~~~l~~~~~-------------~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~ 650 (823)
|+|.+++..... ...+.+.... ....+|+.++++.+||+|||+++
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence 999998854221 1112333322 22334445788899999999986
Q ss_pred ecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCcccc
Q 003402 651 MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729 (823)
Q Consensus 651 ~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 729 (823)
..... ........+..|+|||++....++.++|||||||++|||++ |+.|+...... ..... . ..+.
T Consensus 161 ~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~---~-~~~~--- 228 (270)
T cd05047 161 GQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEK---L-PQGY--- 228 (270)
T ss_pred ccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--HHHHH---H-hCCC---
Confidence 42211 11111234678999999988899999999999999999997 88887432111 11111 1 1110
Q ss_pred ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 730 l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+.+......+.+++..||+.+|.+||++.++++.|+..
T Consensus 229 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 229 ------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred ------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 0011112334678999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=266.22 Aligned_cols=242 Identities=19% Similarity=0.190 Sum_probs=169.1
Q ss_pred hcCcceeeeeccccceeEEeeeecC---CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~---~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
..+|.+.++||+|+||.||++...+ ++.||||.+... +.+.+|++++++++|||||++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 3579999999999999999997533 578999988643 34568999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+. ++|..++...... |..+..||+..+.||+.+.++.+||+|||+++.+.........
T Consensus 166 e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~ 244 (392)
T PHA03207 166 PKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQC 244 (392)
T ss_pred hhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccc
Confidence 9996 6777777322110 1223334444455666688899999999999876544333333
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc-cchhHHHHhhccCCccc-------cc---
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS-FNLLGHAWSLCKNDRAH-------EL--- 730 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~-~~l~~~~~~~~~~~~~~-------~l--- 730 (823)
....||+.|||||++....++.++|||||||++|||++|+.|+....... ...+............. .+
T Consensus 245 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 324 (392)
T PHA03207 245 YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKH 324 (392)
T ss_pred cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHH
Confidence 45689999999999999999999999999999999999999975432221 11111111110000000 00
Q ss_pred ---cCcccccCCC-------HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 731 ---MDPVLQNEVS-------LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 731 ---~d~~l~~~~~-------~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......... ......+..++..|++.||++||++.|++.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 325 FKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000001 0123456788999999999999999999886
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=256.56 Aligned_cols=229 Identities=21% Similarity=0.340 Sum_probs=168.2
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.|++.++||+|+||.||+|.... +..+|+|.+........+.|.+|+++++.++||||+++++++..++..++|+||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 36777899999999999998765 77899999976666667889999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++|..++..... .+.+..+..++ .+|..+.++.+||+|||+++...... ....
T Consensus 86 ~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~ 161 (282)
T cd06643 86 GGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRD 161 (282)
T ss_pred CCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc--cccc
Confidence 9999888754221 23333332222 23444678889999999997653321 1223
Q ss_pred ccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 663 RIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
...||+.|||||++. ...++.++|||||||++|||++|++|+...... .......... ...+.
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~~~~~~~-~~~~~------ 229 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM-----RVLLKIAKSE-PPTLA------ 229 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH-----HHHHHHhhcC-CCCCC------
Confidence 357899999999984 455788999999999999999999987533211 1111111110 00111
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++..||+.||++||++.++++.
T Consensus 230 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 230 -QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred -CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111234567889999999999999999998764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=268.34 Aligned_cols=219 Identities=24% Similarity=0.265 Sum_probs=160.6
Q ss_pred eeeccccceeEEeeee----cCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 531 SKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~----~~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
+.||+|+||.||+++. .+++.||+|.+.... ......+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6899999999999875 247899999997532 2234567889999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 605 NKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 605 ~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
+|+|.+++...... |..+..|++..+.+|..+.++.+||+|||+++...... .......
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~ 159 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFC 159 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--Cceeccc
Confidence 99999888543211 11122223333345555788899999999998654321 1233467
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
||+.|||||.+.+..++.++|||||||++|||++|+.|+..... ..... ..... . ...+.....
T Consensus 160 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~~---~i~~~-~----------~~~p~~~~~ 223 (318)
T cd05582 160 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--KETMT---MILKA-K----------LGMPQFLSP 223 (318)
T ss_pred CChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--HHHHH---HHHcC-C----------CCCCCCCCH
Confidence 99999999999988899999999999999999999999853221 11111 11110 0 011112334
Q ss_pred HHHHHHHHccccCcCCCCCHHH
Q 003402 746 RYINVALLCVQENAEDRPTMSD 767 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~e 767 (823)
.+.+++..||+.||++||++.+
T Consensus 224 ~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 224 EAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHHhhcCHhHcCCCCC
Confidence 6778999999999999999665
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=251.01 Aligned_cols=228 Identities=22% Similarity=0.298 Sum_probs=168.2
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+|++.++||+|+||.||++... +++.+|+|.++.. .....+.+.+|+.++++++|+||+++++.+.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999875 4789999998643 3344577899999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++|+|.+++..... ..+.... +...+.+|+.++++.++|+|||+++.+..... ..
T Consensus 81 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~~ 157 (255)
T cd08219 81 DGGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA--YA 157 (255)
T ss_pred CCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc--cc
Confidence 99999888753211 1112211 11222344447788999999999987643221 12
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....|++.|||||++.+..++.++||||||+++|||++|+.|+..... ... ..... .+.... .+.
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--~~~---~~~~~-~~~~~~---------~~~ 222 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--KNL---ILKVC-QGSYKP---------LPS 222 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--HHH---HHHHh-cCCCCC---------CCc
Confidence 235789999999999988899999999999999999999999853211 111 11111 111111 111
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++.+||+.||++||++.+|+..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 233457789999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=255.28 Aligned_cols=241 Identities=20% Similarity=0.290 Sum_probs=170.1
Q ss_pred ccHHHHHHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEE-
Q 003402 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCI- 591 (823)
Q Consensus 515 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~- 591 (823)
+.+..+..+.++|++.+.||+|+||.||+++... ++.+|+|.++... ...+++.+|+.++.++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 3345556677899999999999999999998754 7899999886532 2346788999999999 6999999999985
Q ss_pred ----eCCeEEEEEEcccCCCchhhccCCC-cccccCH----------------------HHHHHHHhccccccCCCceec
Q 003402 592 ----EQGEKILIYEYMVNKSLDVFLFDPT-KKHLLGW----------------------QLRVRIIDGIAQDQHMNPKIS 644 (823)
Q Consensus 592 ----~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~----------------------~~r~~i~~~ia~d~~~~~KI~ 644 (823)
.++..++||||+++++|.+++.... ....+.. .|+.....+|+.+.++.+||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence 3457899999999999998774311 1111222 222222344555778889999
Q ss_pred eeeceeecCCCccccccccccccccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-----GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-----~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~ 719 (823)
|||+++.+...... .....|++.|+|||++.. ..++.++|||||||++|||++|+.|+...... . ...
T Consensus 167 dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~--~---~~~ 239 (286)
T cd06638 167 DFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM--R---ALF 239 (286)
T ss_pred cCCceeecccCCCc--cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--H---HHh
Confidence 99999876433221 223579999999998753 45789999999999999999999997533211 0 000
Q ss_pred hhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 720 ~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. .......+.+ +......+.+++.+||+.||++||++.||++.
T Consensus 240 ~~-~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 240 KI-PRNPPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hc-cccCCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00 0000011111 11123467889999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-27 Score=249.44 Aligned_cols=235 Identities=20% Similarity=0.346 Sum_probs=173.2
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||.||++... +++.+|+|.+........+.+.+|+.++++++||||+++++++.+.+..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 367889999999999999999875 4788999999866555678899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 603 MVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++++|..++...... |.....|+...+.+|..++++.+||+|||++..+.... ....
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~ 159 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--AKRK 159 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh--hccc
Confidence 9999999987543111 01111122222344555788899999999998764321 1122
Q ss_pred cccccccccccccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 663 RIVGTYGYMSPEYALEG---VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~---~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
...|+..|+|||.+... .++.++|||||||++|||++|+.|+........ ....... +...+.+ ..
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-----~~~~~~~----~~~~~~~--~~ 228 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-----LFLISKS----NFPPPKL--KD 228 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhc----cCCCccc--cc
Confidence 35789999999998776 889999999999999999999999754321110 0001000 0000111 11
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++.+||+.+|.+||++.+|+.+
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred hhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 22345678899999999999999999998763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=255.37 Aligned_cols=230 Identities=20% Similarity=0.350 Sum_probs=169.5
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+.|++.++||+|+||.||+|+... ++.||+|.+........+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 568888999999999999998765 7899999998766666788999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|..++..... .+.+.. +.....+|..+.++.+||+|||++....... ...
T Consensus 92 ~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~ 167 (292)
T cd06644 92 PGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--QRR 167 (292)
T ss_pred CCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc--ccc
Confidence 99999887753221 122222 2222334444678889999999987643321 112
Q ss_pred cccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 662 KRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
....|++.|+|||++. ...++.++|||||||++|||++|+.|+...... ......... .....
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~-~~~~~------ 235 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLKIAKS-EPPTL------ 235 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-----HHHHHHhcC-CCccC------
Confidence 2356889999999985 345788999999999999999999987543211 111111010 00000
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++..||+.+|++||++.++++.
T Consensus 236 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 236 -SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred -CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1112234467889999999999999999999874
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=253.03 Aligned_cols=232 Identities=22% Similarity=0.328 Sum_probs=170.5
Q ss_pred cCcceeeeeccccceeEEeeeecC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|.+.++||+|+||.||+|...+ ...||||...... ....+.|.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 567888999999999999998644 2479999887654 4456789999999999999999999998875 567899
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++|+|.+++..... .+.+..+..+ +.+|+.+.++.+||+|||+++.+.....
T Consensus 85 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 85 MELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 999999999999864321 2334333332 3344456778899999999987754432
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
... ....++..|+|||.+....++.++|||||||++||+++ |..|+...... ..... .......
T Consensus 163 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~---~~~~~~~--------- 227 (270)
T cd05056 163 YKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--DVIGR---IENGERL--------- 227 (270)
T ss_pred eec-CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHH---HHcCCcC---------
Confidence 221 12345678999999988889999999999999999996 99887533221 11111 1111100
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+......+.+++.+|+..+|++||++.+++.+|+..
T Consensus 228 -~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 228 -PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11122345688899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=244.22 Aligned_cols=260 Identities=20% Similarity=0.263 Sum_probs=183.0
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC-hhh-HHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS-GQG-LKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~-~~~-~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~l 598 (823)
.++|+..++|++|.||.||+|+... ++.||+|+++-.. ..+ ----++||.+|.+++|||||.+..+.... +..||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 3568889999999999999998764 7899999997432 111 23458999999999999999999988653 67999
Q ss_pred EEEcccCCCchhhccCCCc--------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 599 IYEYMVNKSLDVFLFDPTK--------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~--------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|||||++ +|..++..... .|..-+.||+.+..|++..+.+.+||+||||||.++.. .
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp--~ 231 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP--L 231 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC--c
Confidence 9999976 67666643321 13344457777888888899999999999999987653 2
Q ss_pred cccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC--------cccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND--------RAHE 729 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~--------~~~~ 729 (823)
...+..+-|..|.|||.+.+.+ |+++.|+||+|||+.|++++++-+..... .+-+.....+..-. ....
T Consensus 232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE--~dQl~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE--IDQLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch--HHHHHHHHHHhCCCccccCCCccccc
Confidence 2344577899999999998765 89999999999999999999987643221 11111111111100 0000
Q ss_pred cc---------CcccccCCCHH-HHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCCCCCCCCcccc
Q 003402 730 LM---------DPVLQNEVSLP-MLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTF 790 (823)
Q Consensus 730 l~---------d~~l~~~~~~~-~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~p~~p~~~~~ 790 (823)
.+ ...++..+... ..+.-.+++-..+..||.+|-|+.|.++. +-..+.|.|..|.+...
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h--~~F~e~P~p~~P~~~Pt 378 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH--EYFRETPLPIDPSMFPT 378 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc--cccccCCCCCChhhcCC
Confidence 00 00111112111 23556677778888999999999998874 34457788877776553
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=266.57 Aligned_cols=242 Identities=20% Similarity=0.262 Sum_probs=167.9
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-----eEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG-----EKI 597 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~-----~~~ 597 (823)
+|++.++||+|+||.||+++.. +++.||||++... .....+++.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999864 5899999998653 2334567899999999999999999999998776 889
Q ss_pred EEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+|+||+. ++|...+...... |..++.|++..+.||+.+.++.+||+|||+++........
T Consensus 81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 9999997 5676666432210 1223333444455666688999999999999876433221
Q ss_pred cccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccc--------
Q 003402 659 GNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE-------- 729 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~-------- 729 (823)
......+|+.|+|||.+.+. .++.++|||||||++|||++|+.||...... ..+.............+
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 160 -HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI--QQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred -cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 12234689999999998874 4799999999999999999999998543211 11111111000000000
Q ss_pred ---cc----C-ccccc--CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 730 ---LM----D-PVLQN--EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 730 ---l~----d-~~l~~--~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+. . +.... .........+.+++..|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00 0 00000 0111224567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=268.23 Aligned_cols=239 Identities=17% Similarity=0.185 Sum_probs=165.4
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
..+|.+.+.||+|+||.||++.... ++.||||... ...+.+|++++++++|+|||++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4579999999999999999998865 7889999642 23467899999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+. ++|..++..... .+.+.. |+.+..||+.+.++.+||+|||+++.+........
T Consensus 242 ~~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 318 (461)
T PHA03211 242 YR-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPF 318 (461)
T ss_pred cC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccc
Confidence 95 688777743211 233333 33334455557888999999999987654332222
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC--ccchhHHHHhhccCCcc--ccc---cCc
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD--SFNLLGHAWSLCKNDRA--HEL---MDP 733 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~--~~~l~~~~~~~~~~~~~--~~l---~d~ 733 (823)
.....||+.|||||++.+..++.++|||||||+||||++|..++...... ................. .+. ...
T Consensus 319 ~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~ 398 (461)
T PHA03211 319 HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGS 398 (461)
T ss_pred ccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcch
Confidence 33467999999999999999999999999999999999988764322111 00000111111110000 000 000
Q ss_pred c------------cccCCC-------HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 V------------LQNEVS-------LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~------------l~~~~~-------~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ...... ......+.+++.+||+.||++|||+.|+++.
T Consensus 399 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 399 RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 000000 0112357789999999999999999999875
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-28 Score=267.32 Aligned_cols=223 Identities=18% Similarity=0.211 Sum_probs=165.2
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
+.||+|+||.||+++.. +++.||+|.+... ......++.+|++++..++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 5889999999753 2234467889999999999999999999999999999999999999
Q ss_pred CchhhccCCCcc-------------------cc-cCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 607 SLDVFLFDPTKK-------------------HL-LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 607 sL~~~l~~~~~~-------------------~~-l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
+|..++...... |. .++.||+..+.||+.+.++.+||+|||+++....... ......|
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g 158 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCG 158 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--ccccccC
Confidence 998887543211 11 2233444445556668889999999999986432221 2234579
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+.....+ ..... . .... ...+......
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~---i-~~~~----------~~~p~~~~~~ 222 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL---I-LMEE----------IRFPRTLSPE 222 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHH---H-hcCC----------CCCCCCCCHH
Confidence 99999999999999999999999999999999999998532211 11110 0 0000 0111123346
Q ss_pred HHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 747 YINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
+.+++..||+.||++|+ ++.++++.
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 77899999999999996 89998764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=263.15 Aligned_cols=221 Identities=17% Similarity=0.209 Sum_probs=160.3
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHH-HHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMM-LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~-~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+++.. +++.||||.+... .....+++..|.. +++.++||||+++++.+..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 5889999998653 2233455666665 56779999999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..+..|++..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~g 158 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DTTTTFCG 158 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--CCcccccC
Confidence 9998877543211 22233344445566667889999999999997542211 12334679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+. ..... .. + .........
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~---~~~~~-~~--------~--~~~~~~~~~ 222 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV--AEMY---DNILH-KP--------L--VLRPGASLT 222 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH--HHHH---HHHHc-CC--------c--cCCCCCCHH
Confidence 9999999999999999999999999999999999999853221 1111 11111 00 0 011123456
Q ss_pred HHHHHHHccccCcCCCCCHHHHH
Q 003402 747 YINVALLCVQENAEDRPTMSDVV 769 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~evl 769 (823)
+.+++..|++.+|.+||++.+.+
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCCCH
Confidence 77899999999999999986433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=261.09 Aligned_cols=218 Identities=20% Similarity=0.219 Sum_probs=158.4
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHH-HHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMM-LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~-~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
+.||+|+||+||+|+.. +++.||||.+.... ....+++..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999999999875 58999999996432 222345555654 56789999999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.|++..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KTTSTFCG 158 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--CccccccC
Confidence 9998887543211 12223334444456666889999999999997542221 22334679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+ ...... .. . .........
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~~---~~~i~~-~~--------~--~~~~~~~~~ 222 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--AEM---YDNILN-KP--------L--RLKPNISVS 222 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--HHH---HHHHHc-CC--------C--CCCCCCCHH
Confidence 9999999999999999999999999999999999999853221 111 111100 00 0 011122456
Q ss_pred HHHHHHHccccCcCCCCCHH
Q 003402 747 YINVALLCVQENAEDRPTMS 766 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~ 766 (823)
+.+++..|++.||.+||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCC
Confidence 78899999999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=254.51 Aligned_cols=233 Identities=25% Similarity=0.380 Sum_probs=169.7
Q ss_pred cCcceeeeeccccceeEEeeeecC-C----cEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-G----QEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~----~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.+|++.+.||+|+||.||+|...+ + ..||+|.+.... ....+++.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 467888999999999999998653 3 268999887553 3445789999999999999999999999987 78999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+||+++|+|.+++...... +.+.....+ +.+|..+.++.+||+|||+++.+....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEecCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 99999999999998653221 333333222 233444677889999999998765332
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.........++..|||||.+....++.++||||||+++||+++ |+.|+...... .+.. .. ..+..
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~---~~-~~~~~-------- 229 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPD---LL-EKGER-------- 229 (279)
T ss_pred cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHH---HH-hCCCC--------
Confidence 2111112234678999999988899999999999999999999 99887533211 1111 11 11100
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+......+.+++..||..+|.+||++.++++.|+..
T Consensus 230 -~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 230 -LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 011112334677889999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=252.25 Aligned_cols=218 Identities=20% Similarity=0.306 Sum_probs=155.6
Q ss_pred eeeccccceeEEeeeecC-------------CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 531 SKLGEGGFGPVYKGRLLN-------------GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-------------~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
+.||+|+||.||+|++.. ...||+|.+..........|.+|+.++..++||||+++++++.+....+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 469999999999997532 2358999987655555568999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCC-------ceeceeec
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMN-------PKISDFGM 648 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~-------~KI~DFGl 648 (823)
+||||+++|+|+.++..... .+.+.....++ .+|+.+.++. +|++|||+
T Consensus 81 lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred EEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99999999999988864321 13333333222 2333333332 79999999
Q ss_pred eeecCCCcccccccccccccccccccccc-CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 649 ARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 649 a~~~~~~~~~~~~~~~~Gt~~YmAPE~~~-~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
+...... ....|+..|||||++. ...++.++|||||||++|||++ |+.|+...... .. ...... .
T Consensus 159 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~-~~~~~~-~ 225 (262)
T cd05077 159 PITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-----EK-ERFYEG-Q 225 (262)
T ss_pred CccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-----HH-HHHHhc-C
Confidence 8765322 2246889999999887 4668999999999999999984 66665322110 00 000000 0
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.. ...+....+.+++..||+.||++||++.+|++.++
T Consensus 226 -~~---------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 226 -CM---------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -cc---------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 00 11122356788999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=265.78 Aligned_cols=240 Identities=19% Similarity=0.235 Sum_probs=171.9
Q ss_pred HHHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 520 VTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 520 ~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
+....++|++.+.||+|+||.||+++... ++.||+|.+... .....+.+.+|+.+++.++||||+++++.+.+++.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 34455889999999999999999998764 789999998642 12234568899999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
.++||||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++.+.....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence 99999999999999988543211 122233344445566668899999999999987754322
Q ss_pred ccccccccccccccccccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEG----VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~----~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
. ......||+.|||||++... .++.++|||||||++|||++|+.|+..... ................
T Consensus 198 ~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~~~~~~--- 268 (371)
T cd05622 198 V-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMNHKNSLTF--- 268 (371)
T ss_pred c-cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCCCcccC---
Confidence 1 22346799999999998753 378999999999999999999999853221 1111111111110111
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCC--CCCHHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAED--RPTMSDVVSMI 772 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~L 772 (823)
.........+.+++..|++.++.+ ||++.++++..
T Consensus 269 ----~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 269 ----PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ----CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 011123456777888899844433 78899988754
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=259.71 Aligned_cols=223 Identities=20% Similarity=0.281 Sum_probs=162.4
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||+||+++... ++.||||.+++.. ....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 479999999999998754 7899999997532 23456688999999888 699999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTTSTFCG 158 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--CceecccC
Confidence 9998877532210 12233344444555666889999999999998532211 12234679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-ccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+...... ................ ...+.....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----------~~~p~~~~~ 228 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP----------IRIPRFLSV 228 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC----------CCCCCCCCH
Confidence 99999999999999999999999999999999999998643222 1111111221111110 011222335
Q ss_pred HHHHHHHHccccCcCCCCCH
Q 003402 746 RYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~ 765 (823)
.+.+++..||+.||++||++
T Consensus 229 ~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 229 KASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHHhccCHHHcCCC
Confidence 67789999999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=252.84 Aligned_cols=224 Identities=20% Similarity=0.249 Sum_probs=160.8
Q ss_pred eccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 533 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
||+|+||.||+++.. +++.||+|.+.... ....+.+..|++++.+++||||+++++++.++.+.++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999875 48999999986421 12234567799999999999999999999999999999999999999
Q ss_pred hhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 609 DVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 609 ~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
..++..... ..+.+.... ....||+.+.++.+||+|||++..+.... ......|
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~ 156 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQRAG 156 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeeccCC
Confidence 888754221 112333222 22334555788899999999998764332 1223578
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|+|||++.+..++.++|||||||++|||++|+.|+....... .......... ... +.. .......+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~-~~~----~~~-----~~~~~~~~ 225 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTL-EDE----VKF-----EHQNFTEE 225 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhh-ccc----ccc-----ccccCCHH
Confidence 999999999999999999999999999999999999985432211 1001101100 000 000 00123445
Q ss_pred HHHHHHHccccCcCCCCCHHHHHHH
Q 003402 747 YINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.+++..||+.||++||++.|+++.
T Consensus 226 ~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 226 SKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHHHHhccCHhhCCCCccchhh
Confidence 7889999999999999999876643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=254.24 Aligned_cols=216 Identities=20% Similarity=0.291 Sum_probs=154.8
Q ss_pred eeccccceeEEeeeecC-------------------------CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeE
Q 003402 532 KLGEGGFGPVYKGRLLN-------------------------GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586 (823)
Q Consensus 532 ~LG~G~fG~Vy~g~~~~-------------------------~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l 586 (823)
+||+|+||.||+|.+.. ...||+|.+........++|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997521 13589999976544455789999999999999999999
Q ss_pred EeEEEeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHHhc----------------------cccccC------
Q 003402 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDG----------------------IAQDQH------ 638 (823)
Q Consensus 587 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~~----------------------ia~d~~------ 638 (823)
+++|.+....++||||+++|+|+.++..... .+.+..+..++.+ |+.+..
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999998864322 2334444433332 222322
Q ss_pred -CCceeceeeceeecCCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHH-hCCCCCCCCCCCccchh
Q 003402 639 -MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEIL-SSKKNTGVYNTDSFNLL 715 (823)
Q Consensus 639 -~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Ell-tg~~p~~~~~~~~~~l~ 715 (823)
..+|++|||+++..... ....++..|||||.+.+ ..++.++|||||||++|||+ +|+.|+....... ..
T Consensus 160 ~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~ 231 (274)
T cd05076 160 SPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KE 231 (274)
T ss_pred cceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HH
Confidence 23799999998654221 12357889999998876 56899999999999999995 6888764322111 00
Q ss_pred HHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 716 ~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
.. .... ...+.+....+.+++..||+.+|++||+|.+|++.|
T Consensus 232 ~~----~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 232 RF----YEKK-----------HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HH----HHhc-----------cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 00 0000 001111224578899999999999999999999877
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=250.25 Aligned_cols=230 Identities=25% Similarity=0.369 Sum_probs=168.2
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh---------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~---------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
|.+.+.||+|+||.||+|... +++.||+|.+..... +..+.+.+|+.++.+++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 566789999999999999865 478999998864321 1235688999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++|+||+++++|..++...... |..+..|+...+.+|..+.++.+||+|||+++.+..+..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSL 161 (267)
T ss_pred EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccc
Confidence 9999999999999988543210 111222222333455557888999999999987753221
Q ss_pred cc----ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 658 QG----NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 658 ~~----~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
.. ......|+..|+|||.+.+..++.++|||||||++|||++|+.|+...... ...... .+...+
T Consensus 162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~------~~~~~~ 230 (267)
T cd06628 162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-----QAIFKI------GENASP 230 (267)
T ss_pred cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-----HHHHHH------hccCCC
Confidence 11 112356899999999999999999999999999999999999998532211 000110 001111
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++.+||+.||.+||++.+|++.
T Consensus 231 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 231 ----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 1222344567889999999999999999998863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=257.36 Aligned_cols=242 Identities=21% Similarity=0.256 Sum_probs=166.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|.+.++||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56889999999999999999875 47889999987442 22335688999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 603 MVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++ +|..++...... |..+..|++..+.||..+.++.+||+|||+++....... ...
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~ 162 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK--TYS 162 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc--ccc
Confidence 985 777776432211 111222233334455557888999999999986533221 122
Q ss_pred cccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc---c------ccccC
Q 003402 663 RIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR---A------HELMD 732 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~---~------~~l~d 732 (823)
...+|+.|+|||.+.+ ..++.++|||||||++|||+||+.|+...... .............. . .+..+
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE--DELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 3468999999998865 46899999999999999999999998543221 11111111100000 0 00000
Q ss_pred ---ccccc----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 ---PVLQN----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ---~~l~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.... .........+.+++..|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000 0001123457789999999999999999999874
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=252.60 Aligned_cols=239 Identities=23% Similarity=0.325 Sum_probs=167.8
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||.||+|...+ ++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 468888999999999999999864 8899999986432 2234678899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|+.+..... .+.+.....++ .+|..++++.+||+|||+++.+.... .
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--E 155 (286)
T ss_pred cCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--c
Confidence 999999988764322 13333333332 23334778899999999998764432 1
Q ss_pred ccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC--Ccccccc-----
Q 003402 660 NTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN--DRAHELM----- 731 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~l~----- 731 (823)
......|+..|+|||++.+ ..++.++|||||||++|||++|++|+..... ............. ....+..
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD--IDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHHHhCCCchhhHHHhccchH
Confidence 2233568999999999875 4578999999999999999999988743221 1110000000000 0000000
Q ss_pred -----Cccccc-----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 732 -----DPVLQN-----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 732 -----d~~l~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.+.... .........+.+++..||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000 011123566889999999999999999999886
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=256.35 Aligned_cols=229 Identities=22% Similarity=0.285 Sum_probs=166.7
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
|+..+.||+|+||.||++... +++.||||.+.... ....+.+.+|+.++.+++|+|++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999875 48899999986432 22345678999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCH----------------------HHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGW----------------------QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~----------------------~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|..++...... .+.. .|+...+.+|+.+.++.+||+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--- 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEA-GFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--- 157 (285)
T ss_pred cCCCcHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc---
Confidence 9999999887532211 1222 2222233455557888999999999986543221
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....||+.|||||.+.+..++.++|||||||++|||++|+.|+....... . ........... .....
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~-~~~~~~~~~~~----------~~~~~ 225 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-K-REEVERLVKEV----------QEEYS 225 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-h-HHHHHhhhhhh----------hhhcC
Confidence 123479999999999999999999999999999999999999985432210 0 00011110000 00111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCC-----HHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPT-----MSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~ 771 (823)
......+.+++..||+.||++||+ +.|++++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 226 EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 122345778999999999999999 7788763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-28 Score=256.51 Aligned_cols=238 Identities=19% Similarity=0.256 Sum_probs=178.0
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--------------hhHHHHHHHHHHHHhcCCCceeeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--------------QGLKEFKNEMMLIAKLQHRNLVRLL 587 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--------------~~~~~f~~Ev~~l~~l~H~Niv~l~ 587 (823)
..++|++.+.||+|.||+|-+|+.. +++.||||++.+... ...+...+||.+|++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3478999999999999999999865 589999999964310 1135788999999999999999999
Q ss_pred eEEEeC--CeEEEEEEcccCCCchhhccC-------------------CCcccccCHHHHHHHHhccccccCCCceecee
Q 003402 588 GCCIEQ--GEKILIYEYMVNKSLDVFLFD-------------------PTKKHLLGWQLRVRIIDGIAQDQHMNPKISDF 646 (823)
Q Consensus 588 g~~~~~--~~~~lV~Ey~~~gsL~~~l~~-------------------~~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DF 646 (823)
.+..+. +..|||+|||..|.+...--+ ....|..++.||+.+..|++.++++++||+||
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecc
Confidence 998764 689999999999887443211 12235677888999999999999999999999
Q ss_pred eceeecCCCc---cccccccccccccccccccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH
Q 003402 647 GMARMFGGDE---LQGNTKRIVGTYGYMSPEYALEGV----FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719 (823)
Q Consensus 647 Gla~~~~~~~---~~~~~~~~~Gt~~YmAPE~~~~~~----~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~ 719 (823)
|.+-...... ......+.+|||.|||||...++. .+.+.||||+||+||-++.|+-||..... .. .+
T Consensus 255 GVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--~~----l~ 328 (576)
T KOG0585|consen 255 GVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--LE----LF 328 (576)
T ss_pred ceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--HH----HH
Confidence 9998663221 112233468999999999988743 26789999999999999999999842110 00 01
Q ss_pred hhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 720 ~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.+++...+.-....++.+.+.++++.+|++||+.|.+..+|.....-
T Consensus 329 --------~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 329 --------DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred --------HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 11111111111222456678889999999999999999999887643
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=260.50 Aligned_cols=218 Identities=19% Similarity=0.206 Sum_probs=159.0
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHH-HHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMM-LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~-~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+++.. +++.||+|.+.+.. ....+++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999875 47899999986532 122345566654 67889999999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..+..|++....||..+.++.+||+|||+++...... .......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ETTSTFCG 158 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--CccccccC
Confidence 9998877532211 22233344445566677889999999999998532221 22334679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||.+.+..++.++|||||||++|||++|+.|+..... ..+. ..... .. ...+......
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~---~~i~~-~~----------~~~~~~~~~~ 222 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--SQMY---DNILH-KP----------LQLPGGKTVA 222 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--HHHH---HHHhc-CC----------CCCCCCCCHH
Confidence 9999999999999999999999999999999999999853221 1111 11110 00 0112233456
Q ss_pred HHHHHHHccccCcCCCCCHH
Q 003402 747 YINVALLCVQENAEDRPTMS 766 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~ 766 (823)
+.+++.+|++.||.+||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHccCCHhhcCCCC
Confidence 78899999999999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-27 Score=260.29 Aligned_cols=234 Identities=21% Similarity=0.246 Sum_probs=182.8
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChh---hHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQ---GLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~---~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~ 597 (823)
..+.|++.+.||+|.||.||+++.+. |+.+|+|.+.+.... ..+...+|+.+|.++. |||||.+++.+++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34678888999999999999998876 999999999765332 3468999999999998 999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCc------------------ccccCHHHHHHHHhccccc----cCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTK------------------KHLLGWQLRVRIIDGIAQD----QHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~------------------~~~l~~~~r~~i~~~ia~d----~~~~~KI~DFGla~~~~~~ 655 (823)
+|||++.+|.|.+.|..... .|..+..||+.+++|++.. .++.+|++|||+|+....
T Consensus 113 lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~- 191 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP- 191 (382)
T ss_pred EEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-
Confidence 99999999999888765411 1344555666666666642 245799999999998765
Q ss_pred ccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.......+||+.|+|||++....|+.++||||.||++|.|++|.+||.........+ .. ..++. ..
T Consensus 192 --~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-----~i-~~~~~------~f 257 (382)
T KOG0032|consen 192 --GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-----AI-LRGDF------DF 257 (382)
T ss_pred --CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-----HH-HcCCC------CC
Confidence 234556899999999999999999999999999999999999999986544322111 00 01111 11
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+.-......+.+++..++..||.+|+|+.++++.
T Consensus 258 ~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 258 TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 222233446678889999999999999999999985
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-28 Score=255.60 Aligned_cols=218 Identities=22% Similarity=0.384 Sum_probs=157.6
Q ss_pred eeeccccceeEEeeeecC--------CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 531 SKLGEGGFGPVYKGRLLN--------GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~--------~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+.||+|+||.||+|.... ...||+|.+........++|.+|+.+++.++|||++++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 479999999999997642 235899998765555567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCC--------ceeceeeceeec
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMN--------PKISDFGMARMF 652 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~--------~KI~DFGla~~~ 652 (823)
+++|+|..++..... .+.+.....++ .+|+.+.+.. +|++|||++...
T Consensus 81 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 81 VKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 999999999865432 23333333222 2233333333 589999988754
Q ss_pred CCCccccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCC-CCCCCCCCccchhHHHHhhccCCccccc
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKK-NTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~-p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
.. .....|++.|||||++.+. .++.++|||||||++|||++|.. |+...... .... ....
T Consensus 159 ~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~~----~~~~------ 220 (258)
T cd05078 159 LP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKLQ----FYED------ 220 (258)
T ss_pred CC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHHH----HHHc------
Confidence 32 2235688999999999874 57999999999999999999954 43221110 0000 0000
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
....+......+.+++..||+.||++|||++++++.|+
T Consensus 221 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 -----RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -----cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 01112223356788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-27 Score=260.21 Aligned_cols=172 Identities=17% Similarity=0.222 Sum_probs=134.6
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.....+|++.+.||+|+||.||+|+... ++.||+|..... ....|+.++++++|||||++++++.+.+..++|
T Consensus 62 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 62 VVASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 3445679999999999999999998764 678999975432 235699999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+||+. ++|..++..... .+.+... .....||+.+.++.+||+|||+++......
T Consensus 136 ~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 211 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSR--PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP- 211 (357)
T ss_pred EEccC-CcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc-
Confidence 99995 678777753221 2333333 333344555788899999999998543221
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT 704 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~ 704 (823)
......||+.|||||++.+..++.++|||||||++|||+++..++
T Consensus 212 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 --AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 223467999999999999999999999999999999999976654
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=245.36 Aligned_cols=235 Identities=22% Similarity=0.352 Sum_probs=171.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.+.||.|+||.||+|... ++..+|+|.+.... ....+.+.+|+++++.++|+||+++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999865 57899999987532 33567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccc--
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQ-- 658 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~-- 658 (823)
+++++|.+++........+.+..... ...+|..++++.+||+|||++..+......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999986432211223222211 223344467889999999999876543222
Q ss_pred cccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.......|+..|+|||.+... .++.++|||||||++|||++|+.|+....... .+ ....... .+.+..
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~----~~~~~~~------~~~~~~ 229 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VL----MLTLQND------PPSLET 229 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hH----HHHhcCC------CCCcCC
Confidence 122345789999999999877 78999999999999999999999985432211 01 1111110 011111
Q ss_pred CC-CHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 738 EV-SLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 738 ~~-~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.. .......+.+++..||+.||++||++.+|++
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11 1233466789999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-27 Score=249.77 Aligned_cols=232 Identities=22% Similarity=0.337 Sum_probs=158.8
Q ss_pred eeeccccceeEEeeeecCC---cEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 531 SKLGEGGFGPVYKGRLLNG---QEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~---~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
++||+|+||.||+|+..++ ..+++|.+.... ....+.|.+|+.+++.++||||+++++.|.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999976543 356777776433 344578999999999999999999999999999999999999999
Q ss_pred CchhhccCCCcc-cccCH----------------------HHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 607 SLDVFLFDPTKK-HLLGW----------------------QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 607 sL~~~l~~~~~~-~~l~~----------------------~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
+|.+++...... ..... .|+.....+|+.+.++.+||+|||+++.............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999988643111 11111 1222223344557788999999999875332222222234
Q ss_pred ccccccccccccccC-------CCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 664 IVGTYGYMSPEYALE-------GVFSVKSDVFSFGVLMLEILSS-KKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~-------~~~s~ksDVwSfGvvl~Elltg-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
..|+..|+|||++.. ..++.++|||||||++|||+++ ..|+.... ........ .. +....+.++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--~~~~~~~~---~~-~~~~~~~~~~~ 234 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS--DREVLNHV---IK-DQQVKLFKPQL 234 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHH---Hh-hcccccCCCcc
Confidence 578899999998753 2457899999999999999985 44553221 11111111 11 11223333333
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
.. ....++.+++..|| .+|++||+|++|++.|.
T Consensus 235 ~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 235 EL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 22 23346677888899 57999999999999873
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-27 Score=249.23 Aligned_cols=229 Identities=23% Similarity=0.363 Sum_probs=161.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-----GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-----~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~ 596 (823)
.+|...+.||+|+||.||++... +++.||+|.+.... .+..+.+.+|+.++++++||||+++++++.+ +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888899999999999999875 48899999886431 2334578999999999999999999999876 3678
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++++||+++++|.+++..... +.+..... .+.+|+.+.++.+||+|||+++.+..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGA---LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 899999999999998854321 22222222 22334447788899999999986532
Q ss_pred Ccc-ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 655 DEL-QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 655 ~~~-~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... ........|+..|+|||++.+..++.++|||||||++|||++|+.|+...... .......... ..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-----~~~~~~~~~~-----~~~ 228 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-----AAIFKIATQP-----TNP 228 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-----HHHHHHhcCC-----CCC
Confidence 211 11222356899999999999988999999999999999999999997532111 1111110000 011
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+..++ .||..+|++||+|+||+++
T Consensus 229 ----~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 229 ----QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred ----CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 11122223344444 7888999999999999763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=253.89 Aligned_cols=241 Identities=21% Similarity=0.294 Sum_probs=170.1
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||.||+|...+ ++.||||.++.. .....+.+.+|++++++++|+||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 368889999999999999998764 789999998643 23345789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHH----HH------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRV----RI------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~----~i------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|++++.+..++..... +...... ++ +.+|..++++.+||+|||+++.+..... .
T Consensus 81 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-~ 156 (288)
T cd07833 81 YVERTLLELLEASPGG---LPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-S 156 (288)
T ss_pred cCCCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-c
Confidence 9999877766543221 2222211 22 2344447889999999999987654432 1
Q ss_pred ccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc-----------cC-C-
Q 003402 660 NTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC-----------KN-D- 725 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~-----------~~-~- 725 (823)
......|+..|||||++... .++.++||||||+++|||++|+.|+...... ..+....... .. .
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI--DQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 22345788999999999888 8899999999999999999999887533211 1110000000 00 0
Q ss_pred ----ccccccCcc-cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 ----RAHELMDPV-LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 ----~~~~l~d~~-l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+..++. .....+......+.+++..||+.+|++||++++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000000000 0011122235678999999999999999999998864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-27 Score=250.15 Aligned_cols=226 Identities=19% Similarity=0.347 Sum_probs=168.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+-|+..++||+|+||.||+|... +++.||||.+.... ....+.|.+|+.++.+++||||+++++++.+++..++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 34667789999999999999864 57899999986432 33456799999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|..++... .+.+.....++ .+|..+.++.+||+|||+++.+..... .
T Consensus 84 ~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~ 157 (277)
T cd06641 84 LGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--K 157 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh--h
Confidence 9999999988542 23333332222 334446788899999999987643321 1
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....|+..|+|||.+.+..++.++|||||||++|||++|+.|+...... .. .... ..... + ...
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~---~~~~-~~~~~-----~----~~~ 222 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KV---LFLI-PKNNP-----P----TLE 222 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HH---HHHH-hcCCC-----C----CCC
Confidence 22356889999999999888999999999999999999999987532211 00 0000 11100 0 111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.+|++||++.+++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 223 GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 2234567789999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-28 Score=265.98 Aligned_cols=233 Identities=19% Similarity=0.347 Sum_probs=181.1
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.+.+.++..||.|+||+||++..++ +...|.|.+...+...++.|+-||.+|+...||+||+|++.+...+.++++.||
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 3567788999999999999998765 445678888888888899999999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc--------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 603 MVNKSLDVFLFDPTK--------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~--------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
|.+|-.+..+....+ .|...+.||+.+|-||+...+|.++|+|||.+...... .....
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t--~qkRD 188 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST--RQKRD 188 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhH--Hhhhc
Confidence 999998887643221 13345567788888999999999999999998643222 22234
Q ss_pred ccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 663 RIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.+.|||.|||||+.+ +.+|+.++|||||||+|.||.-+.+|.+..+. ........+.. ...++
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-----MRVllKiaKSe-PPTLl------ 256 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSE-PPTLL------ 256 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-----HHHHHHHhhcC-CCccc------
Confidence 589999999999874 67899999999999999999999998653322 11111111111 11222
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.++...|+..||+.||+++++++.
T Consensus 257 -qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 257 -QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred -CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 133455678889999999999999999999763
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=248.42 Aligned_cols=228 Identities=21% Similarity=0.314 Sum_probs=168.8
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.++||+|+||.||+++.. +++.||+|++... .....+++.+|+.++++++||||+++++++.+.++.++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999865 4789999998643 233456899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----HH------------------hccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----II------------------DGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----i~------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++..... ..+.+..... ++ .+|..+.+..+||+|||++........ .
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~ 157 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE--L 157 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh--h
Confidence 999999988854221 1122322222 22 233336778899999999987644321 1
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....|++.|+|||++.+..++.++|||||||+++||++|+.|+.... . .......... .. ...+
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--~---~~~~~~~~~~-~~---------~~~~ 222 (256)
T cd08218 158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN--M---KNLVLKIIRG-SY---------PPVS 222 (256)
T ss_pred hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC--H---HHHHHHHhcC-CC---------CCCc
Confidence 223568999999999999999999999999999999999999874321 1 1111111111 00 0112
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++.+||+.+|++||+|.+|++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 2334567889999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-27 Score=246.06 Aligned_cols=225 Identities=25% Similarity=0.367 Sum_probs=167.9
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-----GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-----~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
|+..+.||+|+||+||+|... +++.||+|.+.... .+..+++.+|+.++++++|+||+++++++.++...++|+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 566789999999999999876 68999999986432 234578999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHH----HH------------------HhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRV----RI------------------IDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~----~i------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++++|.+++..... +.+.... ++ ..+|..+.++.+||+|||+++......
T Consensus 82 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 82 ELVPGGSLAKLLKKYGS---FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 99999999999854321 2222221 12 233444788899999999998764433
Q ss_pred cccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......|+..|+|||.+.... ++.++|||||||++|||++|+.|+..... ............. .
T Consensus 157 -~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~---------~ 221 (258)
T cd06632 157 -FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-----VAAVFKIGRSKEL---------P 221 (258)
T ss_pred -cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-----HHHHHHHHhcccC---------C
Confidence 223456899999999987766 89999999999999999999999754321 1111111110111 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++.+||+.+|++||++.+++..
T Consensus 222 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 222 PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1122234567789999999999999999998863
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=248.16 Aligned_cols=234 Identities=27% Similarity=0.386 Sum_probs=172.3
Q ss_pred cCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
++|++.+.||+|+||.||+|+.. +.+.||+|.+...... ..++|.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999864 2467999998765433 4578999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcc------cccCHHHHHHH----------------------HhccccccCCCceeceeece
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK------HLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMA 649 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~------~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla 649 (823)
+||||+++|+|.+++...... ..+.+..+..+ +.||..+.++.+||+|||++
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence 999999999999998643311 12344443333 33444577888999999999
Q ss_pred eecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
+....... .......++..|+|||.+.+..++.++||||||+++|||++ |..|+...... .+.. ....+...
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~----~~~~~~~~ 237 (275)
T cd05046 165 KDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLN----RLQAGKLE 237 (275)
T ss_pred cccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHH----HHHcCCcC
Confidence 76533221 12233467888999999998889999999999999999999 66676322111 1111 11111110
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
..........+.+++.+||+.+|++||++.+++.+|.
T Consensus 238 --------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 238 --------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111233457888999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-27 Score=251.49 Aligned_cols=228 Identities=20% Similarity=0.258 Sum_probs=164.8
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
|+..+.||+|+||+||+|... +++.||+|.+.... ....+.+.+|++++.+++|+|++++++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999875 58899999986532 22335678899999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|..++..... ..+.+..... ...+|+.+++..+||+|||+++...... .
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~---~ 157 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE---S 157 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC---c
Confidence 999999988754221 1233333222 2334445778889999999997654322 1
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....|+..|||||++.+..++.++|||||||++|||++|+.|+....... ............ .. ...
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--~~~~~~~~~~~~--~~--------~~~ 225 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--KREEVDRRVLET--EE--------VYS 225 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhhhcc--cc--------ccC
Confidence 123579999999999999999999999999999999999999985332110 001111100000 00 111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCC-----HHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPT-----MSDVVS 770 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~ 770 (823)
......+.+++..|++.||++||+ +.+++.
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 226 AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 223345678999999999999999 556555
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=253.62 Aligned_cols=231 Identities=21% Similarity=0.360 Sum_probs=169.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||.||++... +++.||+|.+........+.|.+|++++++++||||+++++.+.++...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 467889999999999999999875 4789999999766666677899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|..++..... .+....... .+.+|..+.++.+||+|||++........ .
T Consensus 84 ~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~ 159 (280)
T cd06611 84 CDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ--K 159 (280)
T ss_pred cCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc--c
Confidence 999999998854321 122222222 22334446788999999999876533221 1
Q ss_pred ccccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 661 TKRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.....||+.|+|||.+. ...++.++|||||||++|||++|+.|+...... ... ... ..... +.+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~~---~~~-~~~~~-----~~~ 228 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RVL---LKI-LKSEP-----PTL 228 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HHH---HHH-hcCCC-----CCc
Confidence 23357899999999875 345788999999999999999999997543211 111 111 11100 000
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++..||+.+|.+||++.+|++.
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 --DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0111223467789999999999999999999774
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=246.70 Aligned_cols=240 Identities=24% Similarity=0.276 Sum_probs=164.4
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.+.||+|+||.||+|+.. +++.||||.++... ....+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999875 48899999986432 22346788999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
++ ++|..++........+.... +...+.+|..+.++.+||+|||+++...... ..
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~ 157 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--RV 157 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc--cc
Confidence 97 68877775422212222222 2222334455788999999999998654322 11
Q ss_pred cccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh-------ccCC----c--
Q 003402 661 TKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL-------CKND----R-- 726 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~-------~~~~----~-- 726 (823)
.....+++.|+|||++.+. .++.++|||||||++|||+||+.|+...... .......... +... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI-DQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 2234678999999988754 5799999999999999999999987532211 0010000000 0000 0
Q ss_pred --cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 727 --AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 727 --~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.......... ........++.+++..||+.||++|||+.+|+.
T Consensus 237 ~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 237 NTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 001113456778999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-27 Score=252.20 Aligned_cols=228 Identities=21% Similarity=0.338 Sum_probs=170.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
++|.+.+.||+|+||.||++... +++.||+|.+........+.+.+|+.++++++|||++++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888899999999999999864 57899999987554455678999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++.... +.+..+.. ...+|..+.++.+||+|||++........ ..
T Consensus 99 ~~~~L~~~~~~~~----l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~~ 172 (293)
T cd06647 99 AGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KR 172 (293)
T ss_pred CCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--cc
Confidence 9999999886432 22222222 22334446778899999999886644322 12
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....|++.|+|||.+....++.++|||||||++||+++|+.|+........ + ......+. +. .....
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~----~~~~~~~~------~~--~~~~~ 239 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L----YLIATNGT------PE--LQNPE 239 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-e----eehhcCCC------CC--CCCcc
Confidence 235789999999999888899999999999999999999999854322110 0 00000000 00 00111
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++..||+.+|++||++.+++.+
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 234467789999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-27 Score=251.62 Aligned_cols=236 Identities=21% Similarity=0.363 Sum_probs=167.6
Q ss_pred HHHHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe--
Q 003402 517 FASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE-- 592 (823)
Q Consensus 517 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~-- 592 (823)
+.++..+.+.|++.+.||+|+||.||+|+.. +++.+|+|.+.... ....++..|+.++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 3444456678999999999999999999875 47899999986542 3446788999999998 79999999999863
Q ss_pred ----CCeEEEEEEcccCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceecee
Q 003402 593 ----QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDF 646 (823)
Q Consensus 593 ----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DF 646 (823)
....++||||+++|+|..++..... ..+.... +.....+|..+.++.+||+||
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~df 165 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDF 165 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence 4678999999999999998854221 1122221 122223444477888999999
Q ss_pred eceeecCCCcccccccccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL 721 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~ 721 (823)
|+++...... .......|++.|+|||.+. ...++.++|||||||++|||++|+.|+........ . ...
T Consensus 166 g~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~-~----~~~ 238 (282)
T cd06636 166 GVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA-L----FLI 238 (282)
T ss_pred cchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-h----hhH
Confidence 9998653221 1223467899999999886 35688999999999999999999999753221100 0 000
Q ss_pred ccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 722 ~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.... .+. .........+.+++..||+.||.+||++.||++
T Consensus 239 -~~~~-----~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 239 -PRNP-----PPK---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred -hhCC-----CCC---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0000 000 011123456888999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=258.86 Aligned_cols=222 Identities=21% Similarity=0.279 Sum_probs=162.9
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+|+..+.||+|+||.||+++.. +++.||||.+.+.. ....+.+..|+.++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677899999999999999875 48899999987532 234466888999998885 577888999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|..++...... |..+..|++..+.+|+.+.++.+||+|||+++....... ..
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~--~~ 158 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV--TT 158 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc--cc
Confidence 999999999887542210 122233344444556668889999999999986433221 22
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||++.+..++.++|||||||++|||++|+.|+...... ..... ... .. ...+.
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~---i~~-~~----------~~~p~ 222 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQS---IME-HN----------VSYPK 222 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHH---HHh-CC----------CCCCc
Confidence 3457999999999999999999999999999999999999998543211 11111 110 00 01112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
.....+.+++..|++.+|.+|++.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 223 SLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred cCCHHHHHHHHHHcccCHhhCCCC
Confidence 234567889999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-27 Score=248.69 Aligned_cols=232 Identities=22% Similarity=0.312 Sum_probs=171.6
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+|+..+.||+|+||.||++... +++.||+|.+.... ....+++.+|++++++++||||+++++.+...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777899999999999999886 48899999987653 344567999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc--------------------cc-cCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 604 VNKSLDVFLFDPTKK--------------------HL-LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~--------------------~~-l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
++++|.+++...... |. ....|+.....+|..++++.+||+|||++..+.... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~----~~ 157 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL----AK 157 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH----hh
Confidence 999999988643111 11 222222223344455778889999999997653321 11
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
...|+..|+|||++.+..++.++||||||+++|||++|+.|+..................... . +. .+..
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~-----~~----~~~~ 227 (265)
T cd06605 158 TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-P-----PR----LPSG 227 (265)
T ss_pred cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-C-----CC----CChh
Confidence 267899999999999999999999999999999999999998544322122222211111110 0 00 1111
Q ss_pred -HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 743 -MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 743 -~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....+.+++..||..+|++||++.+++.+
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 228 KFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred hcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 34567889999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=262.46 Aligned_cols=223 Identities=20% Similarity=0.218 Sum_probs=161.1
Q ss_pred eeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHH-HHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMM-LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~-~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
+.||+|+||+||+++... ++.||+|.+.... .....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 479999999999998764 6889999987532 122334555544 56789999999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.||+....||+.+.++.+||+|||+++...... .......|
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~~~~~~g 158 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GTTSTFCG 158 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CCcccccC
Confidence 9999888543211 22233344445566667889999999999998543221 12334679
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
|+.|||||++.+..++.++|||||||++|||++|+.|+..... ..... ..... . . .........
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~---~i~~~-~--------~--~~~~~~~~~ 222 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYD---NILNK-P--------L--QLKPNITNS 222 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH--HHHHH---HHHhC-C--------c--CCCCCCCHH
Confidence 9999999999999999999999999999999999999853221 11111 11000 0 0 111223446
Q ss_pred HHHHHHHccccCcCCCCCHHHHHHH
Q 003402 747 YINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.+++..|++.||.+||++.+.+..
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCHHH
Confidence 7789999999999999998754433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-27 Score=254.62 Aligned_cols=238 Identities=17% Similarity=0.215 Sum_probs=171.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||++.... ++.||+|.+.... ....+.+.+|+.+++.++||||+++++.+.++++.++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 368889999999999999998754 7899999987543 233567889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc----
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL---- 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~---- 657 (823)
||+++++|..++...... |..++.|+...+.+|..+.++.+||+|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 999999999998543210 111222222334455567888999999999874211100
Q ss_pred ---------ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 658 ---------QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 658 ---------~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
........|+..|+|||.+.+..++.++|||||||++|||++|+.|+..... ..+... . ..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--~~~~~~---~-~~~--- 231 (305)
T cd05609 161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--EELFGQ---V-ISD--- 231 (305)
T ss_pred ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH---H-Hhc---
Confidence 0011234688899999999988999999999999999999999999742211 111111 0 000
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+.. .......+.+++.+||+.+|++||++.++.++|+..
T Consensus 232 ~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 232 DIEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred ccCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 0111111 112344578899999999999999988888777664
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=250.39 Aligned_cols=241 Identities=22% Similarity=0.287 Sum_probs=168.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|+..++||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++|||++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999886 48899999986432 2234568899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|++++.|+.++.... .+.+.... ..+.+|..+.++.+||+|||++..+.....
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07847 81 YCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-- 155 (286)
T ss_pred ccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc--
Confidence 999999888764322 12333322 223344457788999999999987754321
Q ss_pred ccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH---h-------hccCCc-c
Q 003402 660 NTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW---S-------LCKNDR-A 727 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~---~-------~~~~~~-~ 727 (823)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.|+....... .+..... . ...... .
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHhhhccccccc
Confidence 1223467889999999876 568999999999999999999999885432211 0100000 0 000000 0
Q ss_pred ccccCcccccCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELMDPVLQNEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+......+ ......+.+++..||+.+|++||++.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000011000000 1124567899999999999999999998763
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=248.31 Aligned_cols=225 Identities=25% Similarity=0.382 Sum_probs=165.3
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|++.+.||+|+||.||+|.. .++.||+|.++... ..+.|.+|+.++.+++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4588889999999999999975 67889999986532 346799999999999999999999998765 4789999999
Q ss_pred CCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++|.+++..... ..+.+..+.. ...+|+.+.++.+||+|||+++..... ..
T Consensus 82 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-----~~ 155 (254)
T cd05083 82 KGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-----VD 155 (254)
T ss_pred CCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc-----CC
Confidence 9999999864322 1233333222 233444467889999999999864321 11
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....+..|+|||.+.++.++.++|||||||++|||++ |+.|+...... .+ .... ..+. ......
T Consensus 156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~---~~~~-~~~~---------~~~~~~ 220 (254)
T cd05083 156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EV---KECV-EKGY---------RMEPPE 220 (254)
T ss_pred CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HH---HHHH-hCCC---------CCCCCC
Confidence 2344678999999998999999999999999999998 88876432211 11 1111 1110 011112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.....+.+++.+||+.+|++||++.+|++.|+.
T Consensus 221 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 221 GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 234567889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-27 Score=247.03 Aligned_cols=229 Identities=33% Similarity=0.479 Sum_probs=168.8
Q ss_pred cceeeeeccccceeEEeeeecC-----CcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-----~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
|++.+.||+|+||.||+++..+ +..||+|.+...... ..+.+.+|+.++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3466899999999999998764 378999999765433 5678999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++++|.+++...... .+.+.. +.....+|..+.++.+||+|||+++........
T Consensus 81 e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred eccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 999999999998643221 022222 222334455577889999999999877554322
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
... ...+++.|+|||.+....++.++||||+|++++||++ |+.|+..... ..+... .......
T Consensus 160 ~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~----~~~~~~~--------- 223 (258)
T smart00219 160 KKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEY----LKKGYRL--------- 223 (258)
T ss_pred ccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH----HhcCCCC---------
Confidence 221 2347889999999988889999999999999999999 6666543211 111111 1111111
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
........++.+++.+|++.+|++|||+.|++++|
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11112345688899999999999999999998864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=258.93 Aligned_cols=235 Identities=18% Similarity=0.226 Sum_probs=166.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.++||+|+||.||+++.. +++.||+|.+.+. .....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999876 4788999998642 1223456889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||+++|+|..++...... |..+..||+..+.||+.+.++.+||+|||+++.+..+... .
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~ 159 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-Q 159 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce-e
Confidence 999999999998642111 1223334444556666788899999999999876543321 1
Q ss_pred cccccccccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 661 TKRIVGTYGYMSPEYALE-----GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~-----~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.....||+.|||||++.. +.++.++|||||||+||||++|+.|+..... ............... +.+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~~~-~p~~- 232 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHEERFQ-FPSH- 232 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----HHHHHHHHcCCCccc-CCCc-
Confidence 223579999999999875 5688999999999999999999999853221 111111111100000 0000
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCC--CCCHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAED--RPTMSDVVSM 771 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~ 771 (823)
......++.+++..|++.++.+ |+++.+++++
T Consensus 233 ----~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 233 ----ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ----cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 1112456677777777755443 5688888764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=264.26 Aligned_cols=239 Identities=15% Similarity=0.209 Sum_probs=161.6
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--------
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-------- 593 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-------- 593 (823)
..++|++.++||+|+||.||+|... +++.||||++.... ....+|+.++++++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999875 47899999885432 2345799999999999999999987532
Q ss_pred CeEEEEEEcccCCCchhhccCC-Ccc----------------------cccCHHHHHHHHhccccccC-CCceeceeece
Q 003402 594 GEKILIYEYMVNKSLDVFLFDP-TKK----------------------HLLGWQLRVRIIDGIAQDQH-MNPKISDFGMA 649 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~-~~~----------------------~~l~~~~r~~i~~~ia~d~~-~~~KI~DFGla 649 (823)
...++||||+++ +|..++... ... |.....||+..+.||+.+.+ ..+||+|||+|
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 246799999985 565554311 011 22233344455556666654 47999999999
Q ss_pred eecCCCccccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND--- 725 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~--- 725 (823)
+.+.... ......||+.|||||++.+. .++.++|||||||++|||++|++||...... ..+.... ......
T Consensus 219 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~-~~~~~p~~~ 293 (440)
T PTZ00036 219 KNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRII-QVLGTPTED 293 (440)
T ss_pred hhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-HHhCCCCHH
Confidence 8764322 12235789999999998764 6899999999999999999999998533211 1111111 110000
Q ss_pred -------cccc-----ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 -------RAHE-----LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 -------~~~~-----l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+ +....+...++......+.+++..||+.||.+|||+.|+++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000 000111111222234578899999999999999999999864
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-27 Score=250.92 Aligned_cols=234 Identities=21% Similarity=0.335 Sum_probs=167.3
Q ss_pred cceeeeeccccceeEEeeeec----CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG------ 594 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~------ 594 (823)
|.+.++||+|+||.||+|.+. .++.||||.+... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456689999999999999764 3678999998653 3345678999999999999999999999987542
Q ss_pred eEEEEEEcccCCCchhhccCCC---cccccCHHHH----------------------HHHHhccccccCCCceeceeece
Q 003402 595 EKILIYEYMVNKSLDVFLFDPT---KKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMA 649 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla 649 (823)
..++++||+++|+|..++.... ....+.+... .....+|..+.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 3478999999999988774321 1112233222 22233444577889999999999
Q ss_pred eecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
+.+.............+++.|++||.+....++.++||||||+++|||++ |+.|+..... ..+..+.. .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~---~~~~~- 234 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLI---KGNRL- 234 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHH---cCCcC-
Confidence 87654332222233456788999999999999999999999999999999 7777642211 11111111 11100
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+......+.+++.+||+.+|++||++.++++.|++.
T Consensus 235 ---------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 235 ---------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 01122345788999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-27 Score=246.94 Aligned_cols=228 Identities=19% Similarity=0.279 Sum_probs=168.5
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCeEEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE-QGEKILIYE 601 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-~~~~~lV~E 601 (823)
+|++.+.||+|+||.||++.... ++.||+|.+... .....+.+.+|+.++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 47888999999999999998754 789999998643 23445678999999999999999999998764 446889999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|.+++..... ..+.+.....+ +.+|..+.++.+||+|||+++.+.... .
T Consensus 81 ~~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--D 157 (257)
T ss_pred ccCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC--C
Confidence 9999999998864221 12333333222 233444778889999999998764332 1
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......|++.|+|||++.+..++.++||||||++++||++|+.|+..... ........ .+... ..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~-~~~~~---------~~ 222 (257)
T cd08223 158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRII-EGKLP---------PM 222 (257)
T ss_pred ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHH-hcCCC---------CC
Confidence 22346789999999999999999999999999999999999998753211 11111111 11110 11
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+......+.+++.+|++.+|++||++.+++++
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 223 PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 22344578899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=253.22 Aligned_cols=240 Identities=20% Similarity=0.257 Sum_probs=165.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|.+.++||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888999999999999999875 47899999986432 23345678999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
++ ++|..++..... .+.+. |+...+.||..+.++.+||+|||+++....... .
T Consensus 86 ~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~ 160 (301)
T cd07873 86 LD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--T 160 (301)
T ss_pred cc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC--c
Confidence 97 588887754321 12222 122223344557888999999999986532211 1
Q ss_pred cccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc---CCccccccC----
Q 003402 661 TKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK---NDRAHELMD---- 732 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~---~~~~~~l~d---- 732 (823)
.....+++.|+|||.+.+ ..++.++|||||||++|||++|+.|+...... ........... ......+++
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhccccc
Confidence 223467899999998865 45789999999999999999999987543221 11111111100 000000000
Q ss_pred -----ccccc----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 -----PVLQN----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 -----~~l~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.... .........+.+++.+|++.||.+|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000 0011223457789999999999999999999874
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-29 Score=243.77 Aligned_cols=232 Identities=21% Similarity=0.279 Sum_probs=172.2
Q ss_pred hcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+++|++.++||+|.|+.||++.. +.|+.+|+|.+... +....+++.+|+++...++|||||+|.....+....+||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 46788889999999999999965 45888898887532 3446788999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCC-------------------CcccccCHHHHHHHHhcccc---ccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDP-------------------TKKHLLGWQLRVRIIDGIAQ---DQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~-------------------~~~~~l~~~~r~~i~~~ia~---d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|+|.+++|-.-|... ...|.-.+.||+..++++.. +..--+||+|||+|+.++...
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~-- 167 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE-- 167 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc--
Confidence 999999985433111 11233445555556666554 445568999999999987433
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.-...+|||+|||||++...+|+..+|||+-||+||-|+.|..||.... ...+.+. ...+.. + ....
T Consensus 168 -~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~----I~~g~y-d-----~~~~ 234 (355)
T KOG0033|consen 168 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQ----IKAGAY-D-----YPSP 234 (355)
T ss_pred -ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHH----Hhcccc-C-----CCCc
Confidence 2345789999999999999999999999999999999999999985321 1111111 111100 0 0111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.-....+...+++.+|+..||.+|-|+.|.+.
T Consensus 235 ~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 235 EWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 11234556778899999999999999998765
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-26 Score=243.56 Aligned_cols=236 Identities=23% Similarity=0.298 Sum_probs=168.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~lV~ 600 (823)
++|+..++||.|++|.||++... +++.+|+|.+.... ....+++.+|++++++++||||+++++++.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999985 47899999987542 24457799999999999999999999998653 4789999
Q ss_pred EcccCCCchhhccCCC-cccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 601 EYMVNKSLDVFLFDPT-KKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~-~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||+++++|.+++.... ....+.......++ .+|..+.+..+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 159 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL- 159 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-
Confidence 9999999988764211 11122222222222 23333677889999999987653221
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC---ccchhHHHHhhccCCccccccCcc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD---SFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.....++..|+|||.+.+..++.++|||||||++|||++|+.|+...... ...+..+... .....+.+..
T Consensus 160 ---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 232 (287)
T cd06621 160 ---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPELKDEP 232 (287)
T ss_pred ---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhhccCC
Confidence 12356788999999999999999999999999999999999998644221 1112111111 0111111110
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.........+.+++.+||+.+|++|||+.||++.
T Consensus 233 ---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 233 ---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0012235678899999999999999999999884
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-27 Score=260.93 Aligned_cols=242 Identities=21% Similarity=0.201 Sum_probs=168.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------C
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------G 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~ 594 (823)
.++|++.+.||+|+||.||+++.. .++.||||.+... .....+++.+|+.++..++||||+++++++... .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 478999999999999999999875 4889999998643 233456788999999999999999999998654 3
Q ss_pred eEEEEEEcccCCCchhhccCCCc-----------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK-----------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~-----------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
..++||||++++ |...+...-. .|..+..|++..+.||..+.++.+||+|||+++......
T Consensus 100 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 177 (359)
T cd07876 100 DVYLVMELMDAN-LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF- 177 (359)
T ss_pred eeEEEEeCCCcC-HHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCc-
Confidence 579999999764 5444422100 122344455555667777889999999999998653322
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHh-----------------
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS----------------- 720 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~----------------- 720 (823)
......||+.|||||.+.+..++.++|||||||++|||++|+.|+...... ........
T Consensus 178 --~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 178 --MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI--DQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred --cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 223457899999999999999999999999999999999999998543211 00000000
Q ss_pred --hccCC------ccccccCcccc---cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 721 --LCKND------RAHELMDPVLQ---NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 721 --~~~~~------~~~~l~d~~l~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..... ...++...... ..........+.+++..||+.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 00000000000 00111123567889999999999999999999885
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=264.02 Aligned_cols=182 Identities=22% Similarity=0.317 Sum_probs=146.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||+++.. +++.||||.++... ....+.+.+|+.++.+++||||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999875 48899999996432 234567889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc----
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL---- 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~---- 657 (823)
||+++|+|.+++...... |..++.||+..+.||+.+.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 999999999988543221 223344455556677778899999999999975532110
Q ss_pred -----------------------------ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 658 -----------------------------QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 658 -----------------------------~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
.......+||+.|||||++.+..++.++|||||||++|||++|+.|+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 0011235799999999999999999999999999999999999999853
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=246.75 Aligned_cols=229 Identities=22% Similarity=0.305 Sum_probs=164.4
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ-----SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~ 596 (823)
++|++.++||+|+||.||+|...+ ++.||||.+... .....+.+.+|+.++.+++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 478889999999999999998754 889999988532 123356789999999999999999999998764 567
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++||||+++++|.+++..... +.... +.....+|+.+.++.+||+|||+++.+..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGA---LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 899999999999998854321 12111 12222344457788999999999986543
Q ss_pred Ccc-ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 655 DEL-QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 655 ~~~-~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... ........|+..|+|||.+.+..++.++|||||||++|||++|+.|+...... .. ........
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~-~~~~~~~~-------- 225 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AA-IFKIATQP-------- 225 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HH-HHHHhcCC--------
Confidence 211 11223356899999999999888999999999999999999999997532111 01 00110000
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+......+..++..|+. +|++||++++|++.
T Consensus 226 -~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 226 -TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred -CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0111233344567778888885 89999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-27 Score=248.30 Aligned_cols=233 Identities=21% Similarity=0.320 Sum_probs=166.7
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC----------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS----------GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG 594 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~----------~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~ 594 (823)
+|.+.+.||+|+||.||+|... +++.||||.++... ....+.+.+|+.++.+++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 3667789999999999999864 58899999875321 112356889999999999999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeec
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
..++||||+++++|.+++.... .+.+.....+ +.+|..+.++.+||+|||+++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 9999999999999999886532 2233322222 23344467888999999999865
Q ss_pred CCCccccccccccccccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccc
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~--~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
.............|+..|+|||.+.... ++.++||||||+++||+++|+.|+..... ........... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~-~~~~ 232 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----IAAMFKLGNKR-SAPP 232 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----HHHHHHhhccc-cCCc
Confidence 4322222233457899999999987655 89999999999999999999999742211 11111111111 1111
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+. ..........+.+++..||+.+|++||++.+|++.
T Consensus 233 ~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 233 IP----PDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CC----ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11 11122335678889999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=248.26 Aligned_cols=231 Identities=20% Similarity=0.321 Sum_probs=168.7
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.+.||+|+||.||++... +++.||+|.+... .....+++.+|+.++.+++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 35788899999999999999876 5899999988653 333456899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH-----------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI-----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i-----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
+++++|..++........+.+.....+ +.+|+.+.++.+||+|||+++.+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL--- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc---
Confidence 999999998865322222333332222 233444677889999999998653321
Q ss_pred ccccccccccccccccccCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 660 NTKRIVGTYGYMSPEYALEG------VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~------~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
.....|++.|+|||.+... .++.++|||||||++|||++|+.|+...... ......... ....
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~-~~~~------- 226 (286)
T cd06622 158 -AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--NIFAQLSAI-VDGD------- 226 (286)
T ss_pred -cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--hHHHHHHHH-hhcC-------
Confidence 2234688999999998544 3588999999999999999999997532211 111111100 0000
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....+......+..++.+||+.+|++||++.+++..
T Consensus 227 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 227 --PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred --CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 011222345667889999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=255.61 Aligned_cols=180 Identities=26% Similarity=0.362 Sum_probs=140.9
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||+++... ++.||||.+.+. .....+.|.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 468899999999999999998754 889999998642 2223456889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||+++|+|..++...... |..+..|++..+.||+.+.++.+||+|||+++.+...... .
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~ 159 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV-Q 159 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc-c
Confidence 999999999988542111 1111222233344555678899999999999876443221 1
Q ss_pred cccccccccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003402 661 TKRIVGTYGYMSPEYALE-----GVFSVKSDVFSFGVLMLEILSSKKNTG 705 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~-----~~~s~ksDVwSfGvvl~Elltg~~p~~ 705 (823)
.....||+.|||||++.. ..++.++|||||||++|||++|+.|+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 209 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCC
Confidence 223469999999999863 457899999999999999999999985
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=255.36 Aligned_cols=230 Identities=20% Similarity=0.283 Sum_probs=168.5
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
|....+||+|+||.||++... +++.||||.+........+.+.+|+.++++++||||+++++.+..++..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 344478999999999999875 4889999999765555667899999999999999999999999999999999999999
Q ss_pred CCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccc
Q 003402 606 KSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 606 gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
++|..++...... |..++.|+.....+|..+.++.+||+|||++..+.... .......|+
T Consensus 104 ~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~ 181 (292)
T cd06658 104 GALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKSLVGT 181 (292)
T ss_pred CcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCceeecC
Confidence 9999887542211 11122222233344555788899999999997654322 122345789
Q ss_pred ccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHH
Q 003402 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747 (823)
Q Consensus 668 ~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~ 747 (823)
..|+|||.+.+..++.++|||||||++|||++|+.|+..... ........ ..+.+.+.. .......+
T Consensus 182 ~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~---------~~~~~~~~~--~~~~~~~~ 248 (292)
T cd06658 182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--LQAMRRIR---------DNLPPRVKD--SHKVSSVL 248 (292)
T ss_pred ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH---------hcCCCcccc--ccccCHHH
Confidence 999999999888999999999999999999999999753211 11111100 011111111 11223457
Q ss_pred HHHHHHccccCcCCCCCHHHHHHH
Q 003402 748 INVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 748 ~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..++..|++.||.+|||+.++++.
T Consensus 249 ~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 249 RGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHHccCChhHCcCHHHHhhC
Confidence 778899999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=245.75 Aligned_cols=216 Identities=24% Similarity=0.417 Sum_probs=156.7
Q ss_pred eeeccccceeEEeeeecCCc-----------EEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 531 SKLGEGGFGPVYKGRLLNGQ-----------EVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~-----------~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
+.||+|+||.||+|...+.. .|++|.+...... .+.|.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 47999999999999886532 5888887654332 6789999999999999999999999988 788999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCC-------Cceeceeecee
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHM-------NPKISDFGMAR 650 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~-------~~KI~DFGla~ 650 (823)
+||+++|+|+.++..... .+.+..+..+ +.+|+.+.+. .+||+|||+++
T Consensus 79 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 999999999999865331 2333333322 2333345555 69999999998
Q ss_pred ecCCCccccccccccccccccccccccCC--CCCchhhHHHHHHHHHHHHhC-CCCCCCCCCCccchhHHHHhhccCCcc
Q 003402 651 MFGGDELQGNTKRIVGTYGYMSPEYALEG--VFSVKSDVFSFGVLMLEILSS-KKNTGVYNTDSFNLLGHAWSLCKNDRA 727 (823)
Q Consensus 651 ~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~--~~s~ksDVwSfGvvl~Elltg-~~p~~~~~~~~~~l~~~~~~~~~~~~~ 727 (823)
.+.. .....++..|+|||++... .++.++|||||||++|||++| ..|+....... ... .....
T Consensus 157 ~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~--~~~----~~~~~-- 222 (259)
T cd05037 157 TVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE--KER----FYQDQ-- 222 (259)
T ss_pred cccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--HHH----HHhcC--
Confidence 7543 1224577889999999876 789999999999999999995 55553321110 000 00000
Q ss_pred ccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 728 ~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
...+.+....+.+++..||+.+|.+||++.+|++.|+
T Consensus 223 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 ---------HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ---------CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0011111267888999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-27 Score=258.78 Aligned_cols=244 Identities=20% Similarity=0.182 Sum_probs=169.2
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------ 593 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------ 593 (823)
..++|++.+.||+|+||.||++... .++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3468999999999999999999865 4789999999753 233456788999999999999999999988643
Q ss_pred CeEEEEEEcccCCCchhhccCCCc-----------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTK-----------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~-----------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
...++||||+++ +|...+...-. .|..+..||+..+.||+.+.++.+||+|||+++......
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 173 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 173 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc
Confidence 357999999975 55554422100 122344455555667777889999999999998654322
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH-----------------
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW----------------- 719 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~----------------- 719 (823)
......||+.|||||++.+..++.++|||||||++|||++|+.|+...... ..+.....
T Consensus 174 ---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 174 ---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred ---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 123457899999999999999999999999999999999999998533211 00000000
Q ss_pred -hhccC-CccccccCcc------c--ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 720 -SLCKN-DRAHELMDPV------L--QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 720 -~~~~~-~~~~~l~d~~------l--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..... .....+..+. . ...........+.+++.+|++.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000 0000000000 0 000111224567899999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-27 Score=244.65 Aligned_cols=244 Identities=23% Similarity=0.297 Sum_probs=185.1
Q ss_pred HHHHHHHhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeE
Q 003402 517 FASVTAATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGC 589 (823)
Q Consensus 517 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~ 589 (823)
..++....+++.+...+-+|.||.||+|.|.+ .+.|-||.++.. +.-....|+.|..++..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 34556666778888999999999999996643 456888888754 34456789999999999999999999999
Q ss_pred EEeC-CeEEEEEEcccCCCchhhcc-----CCCcccc----------------------cCHHHHHHHHhccccccCCCc
Q 003402 590 CIEQ-GEKILIYEYMVNKSLDVFLF-----DPTKKHL----------------------LGWQLRVRIIDGIAQDQHMNP 641 (823)
Q Consensus 590 ~~~~-~~~~lV~Ey~~~gsL~~~l~-----~~~~~~~----------------------l~~~~r~~i~~~ia~d~~~~~ 641 (823)
+.+. ...+++|.++.-|+|..||. +...... .+..|.+..++|-..|+..++
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqV 435 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQV 435 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeE
Confidence 9874 67899999999999999997 3322211 222333334445555888999
Q ss_pred eeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHh
Q 003402 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWS 720 (823)
Q Consensus 642 KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~ 720 (823)
||+|=.|+|.+-..++..-....--+..||+||.+.+..|+.++|||||||+||||+| |+.|+...++. ... .
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf--Em~----~ 509 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF--EME----H 509 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--HHH----H
Confidence 9999999998876665544433445789999999999999999999999999999998 78886433221 111 1
Q ss_pred hccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 721 ~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+. ..+-..+..++.++..+|.-||+.+|++||+++|++..|...
T Consensus 510 ylkd---------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 510 YLKD---------GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred HHhc---------cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1111 122234567788999999999999999999999999988654
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=245.97 Aligned_cols=226 Identities=20% Similarity=0.374 Sum_probs=166.5
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcC---CCceeeEEeEEEeCCeEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQ---HRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~---H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.|+..++||+|+||.||+|... +++.||||.+... .....+++.+|+.++++++ |||++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4677789999999999999874 5889999998654 2344567899999999997 999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++++|.+++... .+.+.....+ +.+|..+.++.+||+|||++..+.....
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS- 156 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc-
Confidence 999999999988543 2233222222 2334446788999999999987754331
Q ss_pred cccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......|+..|+|||.+.++ .++.++|||||||++|||++|+.|+...... .... ..... ..+.+..
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~-~~~~~-----~~~~~~~ 224 (277)
T cd06917 157 -KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMM-LIPKS-----KPPRLED 224 (277)
T ss_pred -ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhh-ccccC-----CCCCCCc
Confidence 22335789999999988764 4689999999999999999999998532211 0000 00000 0111111
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. .....+.+++..||+.||++||++.+++.+
T Consensus 225 ~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 225 N---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred c---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0 134567889999999999999999999874
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-27 Score=258.21 Aligned_cols=235 Identities=21% Similarity=0.254 Sum_probs=164.1
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+++... ++.+|+|.+.+.. ....+.|.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 468899999999999999998765 6789999986421 223345889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||+++|+|.+++...... |.....||+..+.||+.+.++.+||+|||+++.+..+.. ..
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~-~~ 159 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQ 159 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc-ce
Confidence 999999999998642111 112222333344566668899999999999986643322 12
Q ss_pred ccccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 661 TKRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.....||+.|||||++. ...++.++|||||||++|||++|+.|+.... ................ + +
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~~-~-p-- 230 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMNHKERFQ-F-P-- 230 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----HHHHHHHHhCCCcccc-C-C--
Confidence 22357999999999986 3568999999999999999999999985321 1111111111110000 0 0
Q ss_pred ccCCCHHHHHHHHHHHHHcccc--CcCCCCCHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQE--NAEDRPTMSDVVSM 771 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~--dP~~RPt~~evl~~ 771 (823)
.........+.+++..|+.. ++..||++.++++.
T Consensus 231 --~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 231 --AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred --CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00111234556666666644 44457899998875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-26 Score=240.66 Aligned_cols=227 Identities=21% Similarity=0.340 Sum_probs=167.2
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.+.||+|+||.||++... +++.+|||.+... .....+.+.+|++++++++|||++++++.+..++..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999875 4789999998653 234457899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccc-cCCCceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQD-QHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d-~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
+++++|.+++..... ..+.+.....++ .+|..+ .+..+||+|||+++.+....
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (256)
T cd08220 81 APGGTLAEYIQKRCN-SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS--- 156 (256)
T ss_pred CCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc---
Confidence 999999999865321 112333322222 222223 34468999999998765432
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......|+..|+|||.+....++.++||||||+++|||++|+.|+...... .... .... .... ..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~---~~~~-~~~~---------~~ 221 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVL---KIMS-GTFA---------PI 221 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHH---HHHh-cCCC---------CC
Confidence 122357899999999999888999999999999999999999987432211 1111 1100 0000 11
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+......+.+++..||+.+|++|||+.|+++.
T Consensus 222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 222 SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11234567889999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=249.09 Aligned_cols=239 Identities=23% Similarity=0.300 Sum_probs=161.3
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCceeeEEeEEEe-----CC
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKL---QHRNLVRLLGCCIE-----QG 594 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l---~H~Niv~l~g~~~~-----~~ 594 (823)
+|++.+.||+|+||+||+|+.. +++.||+|.++... ......+.+|+.++.++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778899999999999999876 48899999987532 12234566788777665 69999999999865 34
Q ss_pred eEEEEEEcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecC
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
..++||||+++ +|..++...... |..+..|++..+.+|+.+.++.+||+|||+++.+.
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 68999999984 787777542211 11122233333445556788999999999998764
Q ss_pred CCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC---Cccc--
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN---DRAH-- 728 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~---~~~~-- 728 (823)
... ......||..|+|||++.+..++.++|||||||++|||++|++|+...... ............ ....
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 160 CQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA--DQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred Ccc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH--HHHHHHHHHhCCCChhhCccc
Confidence 322 123357899999999999999999999999999999999999887433221 111111111000 0000
Q ss_pred -----cccCcccc---cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 729 -----ELMDPVLQ---NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 729 -----~l~d~~l~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
....+... ..........+.+++..|++.||++|||+.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 0011123456788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=249.53 Aligned_cols=228 Identities=21% Similarity=0.290 Sum_probs=167.1
Q ss_pred eeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCC
Q 003402 529 IQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKS 607 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gs 607 (823)
...+||+|+||.||++... +++.||+|.+........+.+.+|+.++..++||||+++++++..++..++|+||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3468999999999999875 588999999976544556778999999999999999999999999999999999999999
Q ss_pred chhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccccc
Q 003402 608 LDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG 669 (823)
Q Consensus 608 L~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~ 669 (823)
|..++...... |..+..|+.....+|..+.++.+||+|||+++.+..+.. ......|+..
T Consensus 105 L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~ 182 (297)
T cd06659 105 LTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPY 182 (297)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cccceecCcc
Confidence 99877542211 111112222223455557889999999999976543321 1233578999
Q ss_pred ccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHH
Q 003402 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYIN 749 (823)
Q Consensus 670 YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~ 749 (823)
|+|||++.+..++.++|||||||++|||++|+.|+..... .... ... ....... .. ........+.+
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~---~~~-~~~~~~~-----~~--~~~~~~~~l~~ 249 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAM---KRL-RDSPPPK-----LK--NAHKISPVLRD 249 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHH---HHH-hccCCCC-----cc--ccCCCCHHHHH
Confidence 9999999998999999999999999999999999753221 1111 111 1100000 00 01122345778
Q ss_pred HHHHccccCcCCCCCHHHHHHH
Q 003402 750 VALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 750 l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++..||+.+|++||++.+|++.
T Consensus 250 ~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 250 FLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHhcCCcccCcCHHHHhhC
Confidence 9999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=249.70 Aligned_cols=240 Identities=21% Similarity=0.305 Sum_probs=170.0
Q ss_pred cHHHHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC
Q 003402 516 SFASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ 593 (823)
Q Consensus 516 ~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~ 593 (823)
...++..++++|++.+.||+|+||.||++... +++.+|+|.+.... ...+++.+|+.++.++ +|||++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 33445556789999999999999999999875 58899999986532 2346788899999999 899999999999764
Q ss_pred -----CeEEEEEEcccCCCchhhccCCC-cccccCHHHHHHH----------------------HhccccccCCCceece
Q 003402 594 -----GEKILIYEYMVNKSLDVFLFDPT-KKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISD 645 (823)
Q Consensus 594 -----~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~D 645 (823)
+..++|+||+++++|.+++.... ....+.+.....+ ..+|..+.++.+||+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~d 171 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVD 171 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEee
Confidence 36899999999999998875311 1112333332222 2344447788899999
Q ss_pred eeceeecCCCccccccccccccccccccccccCCC-----CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHh
Q 003402 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-----FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS 720 (823)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~-----~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~ 720 (823)
||+++.+...... .....|+..|+|||.+.... ++.++|||||||++|||++|+.|+...... ..+ ..
T Consensus 172 fg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~----~~ 244 (291)
T cd06639 172 FGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTL----FK 244 (291)
T ss_pred cccchhccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHH----HH
Confidence 9999876433221 12356899999999886443 689999999999999999999997532211 011 11
Q ss_pred hccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 721 ~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. .......+.+ +......+.+++.+||+.+|++||++.++++.
T Consensus 245 ~-~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 245 I-PRNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred H-hcCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1 1111111111 11223468889999999999999999999874
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=253.60 Aligned_cols=236 Identities=17% Similarity=0.213 Sum_probs=161.8
Q ss_pred eeeeeccc--cceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 529 IQSKLGEG--GFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 529 ~~~~LG~G--~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+.++||+| +||+||+++.. +++.||||++.... ....+.+.+|+.+++.++|||||++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 78999999874 58999999997532 233456788999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCcc----
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDEL---- 657 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~---- 657 (823)
++|+|.+++...... .+.+.. ++..+.||+.+.++.+|++|||.+..+.....
T Consensus 82 ~~~~l~~~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMD-GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 999999988542111 122222 22233445557788899999987654321110
Q ss_pred -ccccccccccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC--
Q 003402 658 -QGNTKRIVGTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD-- 732 (823)
Q Consensus 658 -~~~~~~~~Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d-- 732 (823)
........++..|||||++.+ ..++.++|||||||++|||++|+.|+........ ..... .+....+++
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~-----~~~~~~~~~~~ 234 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKL-----NGTVPCLLDTT 234 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH-HHHHh-----cCCcccccccc
Confidence 001122357788999999976 4589999999999999999999999854322110 00000 000000000
Q ss_pred -----------------cc-----------------cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 -----------------PV-----------------LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 -----------------~~-----------------l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. ............+.+++..||+.||++|||+.||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00 0001111234568899999999999999999999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=244.50 Aligned_cols=229 Identities=23% Similarity=0.363 Sum_probs=168.0
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEKILIY 600 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~~lV~ 600 (823)
+|++.+.||+|+||.||++... +++.||+|.+... .....+++.+|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778899999999999999864 5789999998643 33445678999999999999999999998864 45689999
Q ss_pred EcccCCCchhhccCCC-cccccCHH---------------------------HHHHHHhccccccCCCceeceeeceeec
Q 003402 601 EYMVNKSLDVFLFDPT-KKHLLGWQ---------------------------LRVRIIDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~-~~~~l~~~---------------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
||+++++|..++.... ....+.+. |+.....+|+.+.++.+||+|||+++.+
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999999998885421 11112222 2222233344467788999999999987
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
...... .....|++.|+|||.+....++.++||||||+++|||++|+.|+..... ..+.. ....+..
T Consensus 161 ~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~----~~~~~~~----- 227 (265)
T cd08217 161 GHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLAS----KIKEGKF----- 227 (265)
T ss_pred cCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHH----HHhcCCC-----
Confidence 543321 2235789999999999998999999999999999999999999854321 11111 1111111
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+......+.+++..|++.+|++||++.+|+++
T Consensus 228 ----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 ----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11222344678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=278.56 Aligned_cols=230 Identities=21% Similarity=0.263 Sum_probs=165.2
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~~ 597 (823)
..++|.+.++||+|+||+||+++... +..||+|.+... .......|..|+.++.+++|||||++++++.+ ....+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 34689999999999999999998754 678999988643 23345679999999999999999999998865 45789
Q ss_pred EEEEcccCCCchhhccCCCc-ccccC-----------------------------HHHHHHHHhcccccc----------
Q 003402 598 LIYEYMVNKSLDVFLFDPTK-KHLLG-----------------------------WQLRVRIIDGIAQDQ---------- 637 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~-~~~l~-----------------------------~~~r~~i~~~ia~d~---------- 637 (823)
|||||+++|+|..+|..... ...+. +.|++..+.+|+.+.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 99999999999988753110 00111 334444444554432
Q ss_pred -------CCCceeceeeceeecCCCccccccccccccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003402 638 -------HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNTGVYN 708 (823)
Q Consensus 638 -------~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~~~~~ 708 (823)
...+||+|||+++.+..... .....||+.|||||++.. ..++.++|||||||+||||++|+.||....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 33489999999987643322 234579999999999864 458999999999999999999999985322
Q ss_pred CCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 709 TDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 709 ~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.. ..++ ....... . +. .......+.+|+..||+.+|++||++.|++.
T Consensus 248 ~~-~qli----~~lk~~p--~-----lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 NF-SQLI----SELKRGP--D-----LP---IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred cH-HHHH----HHHhcCC--C-----CC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 11 1111 1111110 0 00 0112356788999999999999999999984
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-26 Score=241.31 Aligned_cols=231 Identities=26% Similarity=0.401 Sum_probs=167.0
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhH--HHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~--~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
|++.+.||+|+||+||+++... ++.+|+|.+........ ....+|+.++.+++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5678999999999999999866 66899999987643332 23466999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++.. ...+.+.....++ .||..+.++.+||+|||++..... .....
T Consensus 81 ~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~~~~~ 155 (260)
T PF00069_consen 81 PGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--NNENF 155 (260)
T ss_dssp TTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS--TTSEB
T ss_pred ccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccc
Confidence 99999999861 1122333333322 334447888999999999986521 12233
Q ss_pred cccccccccccccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~-~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....+|..|+|||++. +..++.++||||+|+++|||++|+.|+...... +........... ..... ....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~~----~~~~~---~~~~ 226 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILKR----PLPSS---SQQS 226 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHHT----HHHHH---TTSH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhcccc----ccccc---cccc
Confidence 4467899999999998 888999999999999999999999987643111 111100000000 00000 0000
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.||++||++.++++.
T Consensus 227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 227 REKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp TTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred chhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0112678899999999999999999999863
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=243.10 Aligned_cols=232 Identities=23% Similarity=0.338 Sum_probs=174.7
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.+.||+|++|.||+++... ++.||||++..... ...+++.+|+..+.+++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 368888999999999999998875 89999999876543 4467899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cc-cCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HL-LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~-l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++++|.+++...... |. ....|+...+.+|..+.++.+||+|||+++.+...... ..
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~--~~ 158 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ--CN 158 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc--cc
Confidence 9999999998643110 11 22223333334455577888999999999876543322 12
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-CccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNT-DSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~-~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...|+..|+|||.+....++.++||||||+++|||++|+.|+..... ....+... .... .. ...+.
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~---~~~~-~~---------~~~~~ 225 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA---ICDG-PP---------PSLPA 225 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH---HhcC-CC---------CCCCc
Confidence 35689999999999999999999999999999999999999754432 11111111 1110 00 01111
Q ss_pred H-HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 P-MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~-~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ....+.+++..||+.+|++||++.+++++
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 226 EEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 2 44678889999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=258.96 Aligned_cols=242 Identities=21% Similarity=0.206 Sum_probs=168.2
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------C
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------G 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~ 594 (823)
.++|++.+.||+|+||.||++... .++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 467999999999999999999865 4789999999753 233456788999999999999999999987543 4
Q ss_pred eEEEEEEcccCCCchhhccCCCc-----------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK-----------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~-----------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
..++||||+++ +|...+..... .|..+..|++..+.||..+.++.+||+|||+++......
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~- 180 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF- 180 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC-
Confidence 57999999975 55555432110 022334444555566777889999999999998754322
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh----------------
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL---------------- 721 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~---------------- 721 (823)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........
T Consensus 181 --~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 181 --MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred --cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 223457899999999999999999999999999999999999998533211 000000000
Q ss_pred ---ccCC-c-----cccccCcccc---cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 722 ---CKND-R-----AHELMDPVLQ---NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 722 ---~~~~-~-----~~~l~d~~l~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.... . ..++...... ..........+.+++.+|++.||++|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0 0000000000 00111123467889999999999999999999885
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=250.47 Aligned_cols=174 Identities=24% Similarity=0.349 Sum_probs=127.9
Q ss_pred eeeccccceeEEeeeecC---CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~---~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~~lV~Ey~~~ 605 (823)
.+||+|+||.||+|+..+ +..||+|.+.... ....+.+|++++++++||||+++++++.. +...++|+||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 689999999999998653 5789999987542 23568899999999999999999999864 5678999999875
Q ss_pred CCchhhccCCC------cccccCHHH----------------------HHHHHhcccc----ccCCCceeceeeceeecC
Q 003402 606 KSLDVFLFDPT------KKHLLGWQL----------------------RVRIIDGIAQ----DQHMNPKISDFGMARMFG 653 (823)
Q Consensus 606 gsL~~~l~~~~------~~~~l~~~~----------------------r~~i~~~ia~----d~~~~~KI~DFGla~~~~ 653 (823)
+|.+++.... ....+.+.. ++..+.||+. +.++.+||+|||+++.+.
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 6655543110 111122222 2222334443 456789999999998765
Q ss_pred CCcc-ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003402 654 GDEL-QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVY 707 (823)
Q Consensus 654 ~~~~-~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~ 707 (823)
.... ........||+.|||||++.+. .++.++|||||||++|||+||+.|+...
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 4322 1223346789999999998764 5899999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=234.18 Aligned_cols=230 Identities=23% Similarity=0.346 Sum_probs=174.0
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKILIY 600 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~lV~ 600 (823)
+|...+.||+|++|.||+|... +++.|++|.+.... ....+.+.+|+.++++++||||+++++.+.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3677899999999999999886 58899999987543 24567899999999999999999999999988 8999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++++|.+++.... .+.+..+..++ .+|..+.++.+||+|||.+.........
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9999999999986532 23333333332 2333366789999999999987654321
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.......++..|+|||.+....++.++||||||++++||++|+.|+.... ......+........ ..
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~---------~~ 224 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKIGSSGEP---------PE 224 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhccccCCC---------cC
Confidence 11234578999999999998889999999999999999999999986443 111122221111111 11
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++.+|++.+|++||++.+++..
T Consensus 225 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 225 IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 222235678889999999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=248.45 Aligned_cols=239 Identities=20% Similarity=0.236 Sum_probs=163.1
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.++||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999875 48899999986432 22335688899999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
++ ++|..++..... .+.+... ...+.+|+.+.++.+||+|||+++.+.... ..
T Consensus 81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~ 155 (284)
T cd07839 81 CD-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV--RC 155 (284)
T ss_pred CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--CC
Confidence 97 477776643211 1222222 222334445778899999999998654322 11
Q ss_pred cccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc------cccccCc
Q 003402 661 TKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR------AHELMDP 733 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~------~~~l~d~ 733 (823)
.....+++.|+|||++.+.. ++.++|||||||++|||+||+.|+........ ............. ..++.+.
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH-HHHHHHHHhCCCChHHhHHhhhcccc
Confidence 22346789999999987654 79999999999999999999988643222111 1111110000000 0000000
Q ss_pred c----cc-----cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 734 V----LQ-----NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 734 ~----l~-----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
. .. ..........+.+++..||+.||.+|||+.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 00 0111123456788999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-26 Score=246.30 Aligned_cols=244 Identities=23% Similarity=0.258 Sum_probs=166.1
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++++|.+.++||+|+||.||+|... +++.||+|.+..... .....+.+|+.++.+++|+||+++++++.+++..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999865 588999999865432 22346789999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||+. ++|..++...... |..++.|+.....||+.+.++.+||+|||+++....... .
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~ 159 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ--T 159 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC--C
Confidence 9996 6776665432111 111222233333455557888999999999986533211 1
Q ss_pred cccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC-------------c
Q 003402 661 TKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND-------------R 726 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~-------------~ 726 (823)
.....+++.|+|||++.+. .++.++|||||||++|||++|+.|+...... ...+...+...... .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-FEQLEKIWTVLGVPTEDTWPGVSKLPNY 238 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHHHHHHcCCCChhhhhhhhhcccc
Confidence 1234678999999998764 5889999999999999999999998543321 11111111111100 0
Q ss_pred cccccCcccccC-----CCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 727 AHELMDPVLQNE-----VSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 727 ~~~l~d~~l~~~-----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+......... ........+.+++.+|++.||++|||+.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 239 KPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000 00112356778999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=250.79 Aligned_cols=225 Identities=27% Similarity=0.407 Sum_probs=163.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+.|++.++||+|+||.||+|+.. +++.||+|.+... ..+..+++.+|+.++++++||||++++++|.+.+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45788899999999999999875 5889999998643 2234467899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||++ |+|.+++.... ..+.+.....+ +.+|..+.++.+||+|||+++.....
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--- 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA--- 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC---
Confidence 9997 56666553211 12333333222 23344467889999999999865322
Q ss_pred ccccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 659 GNTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
....|++.|+|||++. ...++.++||||||+++|||++|+.|+..... ........... . +.+
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-----~~~~~~~~~~~-~-----~~~ 234 (307)
T cd06607 169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQND-S-----PTL 234 (307)
T ss_pred ---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-----HHHHHHHhcCC-C-----CCC
Confidence 2356889999999874 45689999999999999999999998743211 11111111110 0 000
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
........+.+++..||+.+|++||+|.+|+.+.
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 235 ---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred ---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 1112345688899999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=241.32 Aligned_cols=230 Identities=24% Similarity=0.388 Sum_probs=168.7
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.+.||+|+||.||+|... +++.||+|.+..... ...+++.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999875 588999999875433 3567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++..... +.+..... .+.+|+.++++.+||+|||++...........
T Consensus 81 ~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLEHGRI---LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHhhcCC---CChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 999999999865321 22222222 22344457788999999999987654322111
Q ss_pred --cccccccccccccccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 661 --TKRIVGTYGYMSPEYALEGV---FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 661 --~~~~~Gt~~YmAPE~~~~~~---~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.....+++.|+|||++.... ++.++||||||+++||+++|+.|+....... ...+.... +. .+.+
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~----~~~~~~~~-~~-----~~~~ 227 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF----QIMFHVGA-GH-----KPPI 227 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH----HHHHHHhc-CC-----CCCC
Confidence 12356889999999998766 8999999999999999999999985332111 11111110 00 0111
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.. .......+.+++..||+.+|++||++.+++.
T Consensus 228 ~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 PD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred Cc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 10 1112445678999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=242.91 Aligned_cols=239 Identities=21% Similarity=0.268 Sum_probs=167.3
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChh-----hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ-----GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~-----~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
+|++.++||+|+||.||+|... +++.||||.+...... ....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3777899999999999999875 5889999999754322 235678899999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+ +|+|.+++.... ..+.+.....++ .+|+.+.++.+||+|||+++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 9999 999999986543 123333333322 334447788999999999987654321
Q ss_pred ccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---------cc
Q 003402 658 QGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---------RA 727 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---------~~ 727 (823)
......+++.|+|||.+.+ ..++.++|||||||++|||++|.+++..... .............. ..
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 158 --KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD--IDQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred --cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc--HHHHHHHHHHcCCCchhhhhhcccc
Confidence 1223457889999998865 4579999999999999999999766543221 11111111110000 00
Q ss_pred ccccCccccc-----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELMDPVLQN-----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......... .........+.+++..||+.+|++||++.||+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 0112235678899999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=250.72 Aligned_cols=174 Identities=23% Similarity=0.332 Sum_probs=129.2
Q ss_pred eeeccccceeEEeeeec---CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLL---NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+|+.. +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...++|+||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 68999999999999865 35789999986532 23567899999999999999999999865 4578999999865
Q ss_pred CCchhhccCCC------cc----------------------cccCHHHHHHHHhcccc----ccCCCceeceeeceeecC
Q 003402 606 KSLDVFLFDPT------KK----------------------HLLGWQLRVRIIDGIAQ----DQHMNPKISDFGMARMFG 653 (823)
Q Consensus 606 gsL~~~l~~~~------~~----------------------~~l~~~~r~~i~~~ia~----d~~~~~KI~DFGla~~~~ 653 (823)
+|..++.... .. |...+.||+..+.||+. +.++.+||+|||+++.+.
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 6766653211 00 11122233333445554 456789999999998765
Q ss_pred CCcc-ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003402 654 GDEL-QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVY 707 (823)
Q Consensus 654 ~~~~-~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~ 707 (823)
.... ........||+.|||||++.+. .++.++||||+||++|||++|++|+...
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 4321 1223456899999999998874 5899999999999999999999998543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=244.23 Aligned_cols=231 Identities=22% Similarity=0.371 Sum_probs=167.1
Q ss_pred CcceeeeeccccceeEEeeee-cCCcEEEEEEeccCC------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS------GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~------~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
+|+..+.||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467789999999999999986 458899999986432 1235689999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCC-CceeceeeceeecCCC
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHM-NPKISDFGMARMFGGD 655 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~-~~KI~DFGla~~~~~~ 655 (823)
|+||+++++|.+++..... +.+.....++ .+|..+.++ .+||+|||+++.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 9999999999998854321 2222222222 222234444 5899999999876543
Q ss_pred ccc--cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 656 ELQ--GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 656 ~~~--~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... .......||..|+|||.+.+..++.++||||+|+++|||++|+.|+...... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~--------- 226 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASA--------- 226 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhcc---------
Confidence 211 1122357899999999998888999999999999999999999987532211 111111111000
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
......+......+.+++..|++.+|++||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 227 TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0011223334567888999999999999999999886
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=250.23 Aligned_cols=231 Identities=19% Similarity=0.228 Sum_probs=169.0
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG---QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||++...+ ++.||+|.+..... ...+.+.+|++++.+++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 368888999999999999998765 89999999975432 24567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCCCcc-
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL- 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~- 657 (823)
||+.+++|.+++..... ..+... |+...+.||..+.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 81 DYCPGGELFRLLQRQPG-KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred EecCCCCHHHHHHhCCC-CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 99999999998864321 112222 222223445557788999999999876532210
Q ss_pred --------------------------ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc
Q 003402 658 --------------------------QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS 711 (823)
Q Consensus 658 --------------------------~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~ 711 (823)
........||..|+|||++.+..++.++||||||+++|||++|+.|+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 011123578999999999999899999999999999999999999985332210
Q ss_pred cchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCC----HHHHHH
Q 003402 712 FNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT----MSDVVS 770 (823)
Q Consensus 712 ~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt----~~evl~ 770 (823)
.+ ... .+....-.........+.+++.+||+.||++||+ +.+++.
T Consensus 240 -~~----~~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 240 -TF----SNI---------LKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred -HH----HHH---------hcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 00 011 1111000111114567889999999999999999 666655
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-27 Score=233.17 Aligned_cols=241 Identities=19% Similarity=0.197 Sum_probs=182.9
Q ss_pred HHhcCcceeeeeccccceeEEeee-ecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----Ce
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GE 595 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~ 595 (823)
+..++|.+.+.||+|||..||.++ +.+++.+|+|++.-...+..+..++|++..++++|||++++++++..+ .+
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 345779999999999999999997 456889999999877777888999999999999999999999988654 45
Q ss_pred EEEEEEcccCCCchhhccCCCcc-----------------------cc--cCHHHHHHHHhccccccCCCceeceeecee
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK-----------------------HL--LGWQLRVRIIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~-----------------------~~--l~~~~r~~i~~~ia~d~~~~~KI~DFGla~ 650 (823)
.||++.|...|+|.+.+.....+ |. .++.||+.+..||+..+.+.++|.|||.+.
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999998887532211 11 235677777778888889999999999987
Q ss_pred ecCCC-----ccc--ccccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHh
Q 003402 651 MFGGD-----ELQ--GNTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS 720 (823)
Q Consensus 651 ~~~~~-----~~~--~~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~ 720 (823)
...-. +.. ..-....-|..|.|||.+. +..+++++|||||||+||+|+.|..||+.....
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~---------- 247 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ---------- 247 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc----------
Confidence 54211 000 0111234688999999874 556799999999999999999999998533221
Q ss_pred hccCCcc-ccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 721 LCKNDRA-HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 721 ~~~~~~~-~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
++.+ ..+..+.+.-.......+.+.+++.+|+|.||.+||++.+++..++..
T Consensus 248 ---GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 248 ---GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ---CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111 222233333333344677899999999999999999999999988764
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-26 Score=244.89 Aligned_cols=242 Identities=22% Similarity=0.247 Sum_probs=165.2
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.+.||+|+||.||+|+.. +++.||||.+..... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67889999999999999999876 578999999864322 2235678899999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 603 MVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++ +|..++...... |.....|+...+.+|..+.++.+||+|||+++....... ...
T Consensus 85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~ 161 (291)
T cd07844 85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK--TYS 161 (291)
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc--ccc
Confidence 985 888877543211 111222233334455567888999999999976432211 112
Q ss_pred cccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---ccccc------c-
Q 003402 663 RIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---RAHEL------M- 731 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---~~~~l------~- 731 (823)
...++..|+|||.+.+ ..++.++|||||||++|||++|+.|+...... .......+...... ..... .
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV-EDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH-HHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence 2357889999998875 45899999999999999999999987533211 11111111111100 00000 0
Q ss_pred -------CcccccC-CCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 732 -------DPVLQNE-VSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 732 -------d~~l~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
...+... ........+.+++..|++.+|++||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 241 YSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000 00111256778999999999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-26 Score=243.67 Aligned_cols=240 Identities=20% Similarity=0.256 Sum_probs=167.9
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999875 58899999987543 33456899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+ +++|.+++..... .+.+... ...+.+|..+.++.+||+|||+++....... ..
T Consensus 81 ~-~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~ 156 (286)
T cd07832 81 M-PSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-RL 156 (286)
T ss_pred c-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-Cc
Confidence 9 9999998854321 1222222 2223344457788899999999987654321 12
Q ss_pred cccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC------------cc
Q 003402 661 TKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND------------RA 727 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~------------~~ 727 (823)
.....|+..|+|||.+.+. .++.++||||+|+++|||++|++++..... .............. ..
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 2335789999999988754 468999999999999999999766532211 11111111100000 00
Q ss_pred ccccCcccc----cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELMDPVLQ----NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+..+... ..........+.+++.+|++.+|++||++++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 00111234678899999999999999999999874
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=207.67 Aligned_cols=115 Identities=46% Similarity=0.757 Sum_probs=100.4
Q ss_pred CCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCCCeEEEe
Q 003402 48 TLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSS 127 (823)
Q Consensus 48 ~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst 127 (823)
++|++|++|+|+++.|++|||.+......+.+|||...++++||.|||+.| ....+.|.|+.||+|+|.|.+|.++|+|
T Consensus 2 ~~l~~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~~~~vW~snt~~~-~~~~~~l~l~~dGnLvl~~~~g~~vW~S 80 (116)
T cd00028 2 NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNP-SGSSCTLTLQSDGNLVIYDGSGTVVWSS 80 (116)
T ss_pred cCcCCCCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCCCeEEEECCCCCC-CCCCEEEEEecCCCeEEEcCCCcEEEEe
Confidence 468899999999999999999986543489999998765789999999999 4566899999999999999999999999
Q ss_pred cccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCC
Q 003402 128 NVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYP 168 (823)
Q Consensus 128 ~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~P 168 (823)
++.+.....+|.|+|+|||||++.+ +.+||||||||
T Consensus 81 ~~~~~~~~~~~~L~ddGnlvl~~~~-----~~~~W~Sf~~P 116 (116)
T cd00028 81 NTTRVNGNYVLVLLDDGNLVLYDSD-----GNFLWQSFDYP 116 (116)
T ss_pred cccCCCCceEEEEeCCCCEEEECCC-----CCEEEcCCCCC
Confidence 9875345678999999999999873 58899999999
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-26 Score=253.58 Aligned_cols=228 Identities=21% Similarity=0.316 Sum_probs=188.5
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
....|.+..+||+|.|++|.+|+.. .+..||||.+.+.. ......+.+|+++|..+.|||||+++.+......+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 3467899999999999999999875 48999999998653 23345689999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 600 YEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
|||+.+|.+.++|....+ .|...+.||+..+.|++.+.++++||+|||++..+... ..
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~---~~ 210 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG---LM 210 (596)
T ss_pred EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc---cc
Confidence 999999999999854322 14455667888899999999999999999999987643 23
Q ss_pred cccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC-
Q 003402 661 TKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE- 738 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~- 738 (823)
..+.+|++.|.|||+..+..| ++++|+||+||+||-|++|.-||+. ..+.++-++.+.+.
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG------------------~~lk~Lr~rvl~gk~ 272 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG------------------QNLKELRPRVLRGKY 272 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC------------------cccccccchheeeee
Confidence 456899999999999998887 6899999999999999999999853 23344444555443
Q ss_pred -CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 -VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 -~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++......+.+++...+-.+|.+|++++++.+.
T Consensus 273 rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 273 RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred cccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 344456778899999999999999999999764
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-26 Score=247.01 Aligned_cols=240 Identities=22% Similarity=0.288 Sum_probs=164.0
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999875 58899999986432 22345789999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+. ++|..++..... ..+.+.....+ ..+|..+.++.+||+|||+++.+.... ..
T Consensus 81 ~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~--~~ 156 (284)
T cd07860 81 LH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RT 156 (284)
T ss_pred cc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--cc
Confidence 96 688887754321 12333322222 223444788899999999998664322 11
Q ss_pred cccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC--------------
Q 003402 661 TKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND-------------- 725 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~-------------- 725 (823)
.....+++.|+|||.+.+.. ++.++|||||||++|||+||+.|+...... ..+...........
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence 22345788999999887655 689999999999999999999987532211 11111100000000
Q ss_pred -ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 -RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 -~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.........+.. ........+.+++..||+.||++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 236 PSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000000 011123456789999999999999999998863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-26 Score=241.64 Aligned_cols=234 Identities=24% Similarity=0.353 Sum_probs=167.5
Q ss_pred HHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC-----
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQG----- 594 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~----- 594 (823)
.++++|++.+.||+|+||.||+|+.. +++.+|+|.+.... ...++|.+|+.+++++ +|+||+++++++.+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35678999999999999999999875 47899999987543 3446799999999999 7999999999997654
Q ss_pred -eEEEEEEcccCCCchhhccCCC-cccccCHHHHHHH----------------------HhccccccCCCceeceeecee
Q 003402 595 -EKILIYEYMVNKSLDVFLFDPT-KKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 595 -~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~ 650 (823)
..++||||+++++|.+++.... ....+.+.....+ ..+|..+.++.+||+|||++.
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence 4899999999999998875422 1112222222222 233444778889999999998
Q ss_pred ecCCCccccccccccccccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC
Q 003402 651 MFGGDELQGNTKRIVGTYGYMSPEYALE-----GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 651 ~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-----~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
...... .......|+..|+|||.+.. ..++.++|||||||++|||++|+.|+...... ... ... ...
T Consensus 162 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~---~~~-~~~ 233 (275)
T cd06608 162 QLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--RAL---FKI-PRN 233 (275)
T ss_pred ecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH--HHH---HHh-hcc
Confidence 754322 12223568999999998753 34788999999999999999999998532211 111 011 011
Q ss_pred ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 ~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.... + ..+......+.+++.+||+.||++|||+.+|+++
T Consensus 234 ~~~~-----~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 234 PPPT-----L--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred CCCC-----C--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0001 1 1112234578899999999999999999999873
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-26 Score=262.12 Aligned_cols=244 Identities=19% Similarity=0.191 Sum_probs=164.0
Q ss_pred HHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCC------CceeeEEeEEE
Q 003402 519 SVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH------RNLVRLLGCCI 591 (823)
Q Consensus 519 ~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H------~Niv~l~g~~~ 591 (823)
++...+++|++.++||+|+||+||+|... .++.||||+++... ...+++..|+.++.+++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445688999999999999999999875 47889999996532 233456677777777655 45899999887
Q ss_pred eC-CeEEEEEEcccCCCchhhccCCCc-------------------ccc-cCHHHHHHHHhccccccCC-----------
Q 003402 592 EQ-GEKILIYEYMVNKSLDVFLFDPTK-------------------KHL-LGWQLRVRIIDGIAQDQHM----------- 639 (823)
Q Consensus 592 ~~-~~~~lV~Ey~~~gsL~~~l~~~~~-------------------~~~-l~~~~r~~i~~~ia~d~~~----------- 639 (823)
.. .+.++|||++ +++|.+++..... .|. .+..||+.+..||+.+.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 64 5788999988 6677776643211 021 2455555566666665443
Q ss_pred -----CceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch
Q 003402 640 -----NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL 714 (823)
Q Consensus 640 -----~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l 714 (823)
.+||+|||++..... .....+||+.|||||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 281 ~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~ 353 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL--EH 353 (467)
T ss_pred CCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HH
Confidence 489999998864321 223468999999999999999999999999999999999999998543321 11
Q ss_pred hHHHHhhc-----------cCCcccccc----------Ccc-----cccC--CCHHHHHHHHHHHHHccccCcCCCCCHH
Q 003402 715 LGHAWSLC-----------KNDRAHELM----------DPV-----LQNE--VSLPMLVRYINVALLCVQENAEDRPTMS 766 (823)
Q Consensus 715 ~~~~~~~~-----------~~~~~~~l~----------d~~-----l~~~--~~~~~~~~~~~l~~~Cl~~dP~~RPt~~ 766 (823)
+....... ......++. ++. .... ........+.+++..||+.||++|||+.
T Consensus 354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~ 433 (467)
T PTZ00284 354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNAR 433 (467)
T ss_pred HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence 11000000 000000000 000 0000 0001134577899999999999999999
Q ss_pred HHHHH
Q 003402 767 DVVSM 771 (823)
Q Consensus 767 evl~~ 771 (823)
|++++
T Consensus 434 e~L~H 438 (467)
T PTZ00284 434 QMTTH 438 (467)
T ss_pred HHhcC
Confidence 99874
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=234.46 Aligned_cols=228 Identities=25% Similarity=0.394 Sum_probs=171.7
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.|...+.||+|++|.||++... +++.+++|++........+.+.+|+.++++++|+|++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3677799999999999999986 588999999987655566889999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++|.+++.... ..+.+.....++ .+|..+.++.+||+|||++........ ..
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~ 155 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RN 155 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---cc
Confidence 999999886532 123333332222 334446788999999999987654321 23
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
...|+..|+|||.+....++.++||||||++++||++|+.|+...... .... .. .......+.. ...
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~---~~-~~~~~~~~~~-------~~~ 222 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KALF---KI-ATNGPPGLRN-------PEK 222 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHHH---HH-HhcCCCCcCc-------ccc
Confidence 467899999999999888999999999999999999999987533211 0000 00 0011111110 111
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....+.+++..||+.||++|||+.+++++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 14568889999999999999999998863
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-26 Score=207.74 Aligned_cols=108 Identities=40% Similarity=0.886 Sum_probs=102.6
Q ss_pred eecCCCCCccccccCC-CcceeeEeEEEEeCCeEEEEEEecCCCcEEEEEEccCCcEEEEEeecCCCCeEEEEEeCCCCc
Q 003402 226 TCTGPWNGVAFGSAPS-NTTFIFQPIVVQNKDEVYYMYESYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAPDPFC 304 (823)
Q Consensus 226 w~sg~w~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~y~~~~~~~~W~~~~~~~~~~C 304 (823)
||+|+|||..|++.|+ .....+.+.|+.+++|++|+|...+.+.++|++||.+|++++|.|++..++|.+.|++|.++|
T Consensus 1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~~~~~~p~d~C 80 (110)
T PF00954_consen 1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQSWSVFWSAPKDQC 80 (110)
T ss_pred CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeeeEEEEEEEecCCCcEEEEEEecccCC
Confidence 8999999999999999 666788889999999999999999999999999999999999999999999999999999999
Q ss_pred -cccccCCCcccccCCCCccccCCCCcccC
Q 003402 305 -HYGDCGPNSICSVDQTSHCECLEGFKFKS 333 (823)
Q Consensus 305 -~~~~CG~~g~C~~~~~~~C~C~~Gf~~~~ 333 (823)
+|+.||+||+|+.+..+.|+|++||+|++
T Consensus 81 d~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n 110 (110)
T PF00954_consen 81 DVYGFCGPNGICNSNNSPKCSCLPGFEPKN 110 (110)
T ss_pred CCccccCCccEeCCCCCCceECCCCcCCCc
Confidence 99999999999988888999999999975
|
This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=246.06 Aligned_cols=222 Identities=22% Similarity=0.287 Sum_probs=166.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999876 48899999986432 234567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++++|.+++..... +..... .....+|..+.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSGR---FPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred ecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 99999999998854321 222222 11223444577889999999999876443
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.....|++.|+|||.+.+...+.++||||||+++|||++|+.|+..... .. .......+. ..
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~----~~~~~~~~~----------~~ 216 (290)
T cd05580 155 --TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--IQ----IYEKILEGK----------VR 216 (290)
T ss_pred --CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HH----HHHHHhcCC----------cc
Confidence 2335789999999999888899999999999999999999999753221 00 111101110 01
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRP-----TMSDVVS 770 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~ 770 (823)
.+......+.+++..||+.||.+|| ++.|++.
T Consensus 217 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 217 FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 1122245677899999999999999 7777764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=241.08 Aligned_cols=228 Identities=22% Similarity=0.359 Sum_probs=167.6
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.+.||+|+||.||+|.... +..||+|.+.... ....+.+.+|+.++++++|+||+++++.+.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 47788999999999999998764 7899999986431 23456788999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccC-CCceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQH-MNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~-~~~KI~DFGla~~~~~~~~~~ 659 (823)
+++++|.+++..... ..+.+.....++ .+|..+++ ..+||+|||++..+.....
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-- 157 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME-- 157 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc--
Confidence 999999998864321 123343333322 23333445 3569999999987653321
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......|++.|+|||+.....++.++|||||||++|||++|+.|+.... .......... .... ..
T Consensus 158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~-~~~~---------~~ 222 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQ-GYFA---------PI 222 (257)
T ss_pred cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhc-ccCC---------CC
Confidence 1123468999999999998899999999999999999999999974321 1111111111 1111 11
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++.+|++.+|++|||+.+|++.
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 223 SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 12233468889999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-26 Score=241.18 Aligned_cols=244 Identities=20% Similarity=0.266 Sum_probs=175.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEecc--CChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-----CCeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE-----QGEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~--~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-----~~~~ 596 (823)
..|...+.||+|+||.|..+... +|+.||||++.+ ......++-.+|+++++.++|+|||.+++.+.. -+..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 44555689999999999999875 489999999973 344456788999999999999999999999865 4679
Q ss_pred EEEEEcccCCCchhhccCCC-------------------cccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPT-------------------KKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~-------------------~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|+|+|+| .-+|...|+... ..|.-...||+.+..|++.+.+...||+|||||+.......
T Consensus 102 YiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~ 180 (359)
T KOG0660|consen 102 YLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE 180 (359)
T ss_pred EEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCc
Confidence 9999999 557777765443 12445566788888899999999999999999998865422
Q ss_pred cccccccccccccccccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC-----------
Q 003402 658 QGNTKRIVGTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND----------- 725 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~-~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~----------- 725 (823)
....+..+-|..|.|||.+. ...|+.+.||||.|||+.||++|++-|..... .+-+..........
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~--v~Ql~lI~~~lGtP~~e~l~~i~s~ 258 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY--VHQLQLILELLGTPSEEDLQKIRSE 258 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch--HHHHHHHHHhcCCCCHHHHHHhccH
Confidence 33345578899999999876 46799999999999999999999987643211 11111111111100
Q ss_pred ccccccCcccc-cCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 RAHELMDPVLQ-NEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 ~~~~l~d~~l~-~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+....+..... ...+ +......+++..++|..||.+|+|++|.++.
T Consensus 259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 01111110000 0011 1234457889999999999999999998874
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-27 Score=244.11 Aligned_cols=236 Identities=22% Similarity=0.253 Sum_probs=167.6
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-----eEEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG-----EKILIY 600 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~-----~~~lV~ 600 (823)
|...+++|.|+||.||+|.+.. ++.||||+.-.... .--+|+++|+++.|||||+|+-++.... ...|||
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 5566999999999999998765 68999998754321 1236999999999999999999887542 234799
Q ss_pred EcccCCCchhhccCC----Cc-------------------ccccCHHHHHHHHhccccccC-CCceeceeeceeecCCCc
Q 003402 601 EYMVNKSLDVFLFDP----TK-------------------KHLLGWQLRVRIIDGIAQDQH-MNPKISDFGMARMFGGDE 656 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~----~~-------------------~~~l~~~~r~~i~~~ia~d~~-~~~KI~DFGla~~~~~~~ 656 (823)
||||. +|.+.++.. .. .|..+..||+.++.|++.|.+ +.+||||||-||.+..++
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 99987 676666521 11 145677788888899998866 999999999999986554
Q ss_pred cccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC---------Cc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN---------DR 726 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~---------~~ 726 (823)
.. .+..-|.-|.|||.+.+. .|+.+.||||.|||+.||+-|++-|..... ...+.....-+-.. ..
T Consensus 181 pn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 181 PN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred Cc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCCHHHHhhcCcc
Confidence 22 234568899999999875 599999999999999999999987643221 11222111111000 00
Q ss_pred cccccCccccc-----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 AHELMDPVLQN-----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~~~l~d~~l~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+...+.+.. -.......+.++++.++++.+|.+|.++.|++.+
T Consensus 257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111222211 1233445678889999999999999999998864
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=241.31 Aligned_cols=239 Identities=21% Similarity=0.269 Sum_probs=166.0
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKILIYE 601 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~lV~E 601 (823)
|++.++||+|+||.||+|+..+ ++.+|+|++.... ....+.+.+|+.++.+++|||++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 5677999999999999998764 7899999997652 33346789999999999999999999999988 89999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++ +|..++.... ..+.+..... .+.+|+.++++.+||+|||+++....... .
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-~ 156 (287)
T cd07840 81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-A 156 (287)
T ss_pred cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-c
Confidence 9985 8888775432 1223322222 22344447889999999999987754321 1
Q ss_pred ccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---ccc---c---
Q 003402 660 NTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---RAH---E--- 729 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---~~~---~--- 729 (823)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.|+...... ............. ... .
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCchhhccccccchh
Confidence 1223457889999998765 46899999999999999999999987543321 1111111111100 000 0
Q ss_pred --------ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 730 --------LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 730 --------l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.......+...+.+++..||+.+|++||++.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000111111125678899999999999999999998863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=251.83 Aligned_cols=245 Identities=19% Similarity=0.244 Sum_probs=167.5
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~~ 596 (823)
.++|++.++||+|+||.||+|+.. +++.||||.++... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 367999999999999999999864 58899999986432 33456788999999999999999999987654 358
Q ss_pred EEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
++|+||+++ +|..++...... |..++.|+...+.||+.+.++.+||+|||+++........
T Consensus 84 ~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 162 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH 162 (336)
T ss_pred EEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccc
Confidence 999999975 776666432111 1222333444455666688899999999999876433211
Q ss_pred -cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---ccccccCc
Q 003402 659 -GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---RAHELMDP 733 (823)
Q Consensus 659 -~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---~~~~l~d~ 733 (823)
.......||+.|||||.+.+ ..++.++|||||||++|||++|+.|+..... .............. ....+.+.
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 163 TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCCHHHHHHhhch
Confidence 12233578999999998765 5689999999999999999999998853221 11111111111100 00000000
Q ss_pred c-------c--ccCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 V-------L--QNEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~-------l--~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. . ....+ .....++.+++..||+.+|++|||+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0 00000 1124568899999999999999999999986
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=244.65 Aligned_cols=230 Identities=21% Similarity=0.295 Sum_probs=168.3
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
|...++||+|++|.||++... +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 333479999999999999864 5789999998765555567789999999999999999999999999999999999999
Q ss_pred CCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccc
Q 003402 606 KSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 606 gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
++|.+++...... |..+..|+...+.+|..+.++.+||+|||++.....+.. ......|+
T Consensus 101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~ 178 (285)
T cd06648 101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--RRKSLVGT 178 (285)
T ss_pred CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--ccccccCC
Confidence 9999988652111 111112222223445557888999999999876543321 12235689
Q ss_pred ccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHH
Q 003402 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747 (823)
Q Consensus 668 ~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~ 747 (823)
+.|+|||.+.+..++.++|||||||++|||++|+.|+.... ..... ... .... .+.+.. .......+
T Consensus 179 ~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~--~~~~~---~~~-~~~~-----~~~~~~--~~~~~~~l 245 (285)
T cd06648 179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP--PLQAM---KRI-RDNL-----PPKLKN--LHKVSPRL 245 (285)
T ss_pred ccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC--HHHHH---HHH-HhcC-----CCCCcc--cccCCHHH
Confidence 99999999999899999999999999999999999874321 11111 111 1110 011111 11134568
Q ss_pred HHHHHHccccCcCCCCCHHHHHHH
Q 003402 748 INVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 748 ~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+++.+||+.+|++||++.++++.
T Consensus 246 ~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 246 RSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred HHHHHHHcccChhhCcCHHHHccC
Confidence 899999999999999999998873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=241.03 Aligned_cols=230 Identities=22% Similarity=0.353 Sum_probs=160.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHH-HHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMML-IAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~-l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.+.||+|+||.||+++.. +++.||+|+++... .....++..|+.+ ++.++||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999876 48999999987542 2334456667665 566789999999999999999999999
Q ss_pred cccCCCchhhccCC-CcccccCHHHHHHH-----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 602 YMVNKSLDVFLFDP-TKKHLLGWQLRVRI-----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 602 y~~~gsL~~~l~~~-~~~~~l~~~~r~~i-----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|++ |+|..++... .....+.+.....+ +.+|+.+.++.+||+|||+++.+....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 158 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV- 158 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-
Confidence 996 6787776432 11122333322222 223344678889999999998764321
Q ss_pred ccccccccccccccccccccC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 658 QGNTKRIVGTYGYMSPEYALE----GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~----~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
......|+..|+|||.+.+ ..++.++|||||||++|||++|+.|+.........+ ...... .. +
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~-~~-----~ 226 (283)
T cd06617 159 --AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL----KQVVEE-PS-----P 226 (283)
T ss_pred --ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH----HHHHhc-CC-----C
Confidence 1123468999999998864 456899999999999999999999975322111111 111000 00 0
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+. .......+.+++..||+.+|++||++.+|++.
T Consensus 227 ~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 227 QLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 11123567889999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=242.01 Aligned_cols=231 Identities=21% Similarity=0.309 Sum_probs=172.5
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++.|+..+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++++++|+|++++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4466888899999999999999986 588999999976543 56789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|.+++.... ..+.+..+..++. +|..+.++.+||+|||++..+.....
T Consensus 96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 171 (286)
T cd06614 96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-- 171 (286)
T ss_pred ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh--
Confidence 999999999987543 1344444433332 23336778899999999876543221
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......++..|+|||.+.+..++.++|||||||++|||++|+.|+...... ... ..... ....... .
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--~~~---~~~~~-~~~~~~~-------~ 238 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--RAL---FLITT-KGIPPLK-------N 238 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--HHH---HHHHh-cCCCCCc-------c
Confidence 122356889999999999889999999999999999999999987532211 100 01000 0000100 0
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++.+||+.+|.+||++.+|+++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11133567889999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=253.88 Aligned_cols=240 Identities=21% Similarity=0.271 Sum_probs=166.8
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------ 593 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------ 593 (823)
..++|.+.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3467889999999999999999864 57899999987532 23346688999999999999999999988643
Q ss_pred CeEEEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCC
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
...++++|++ +++|..++...... |..++.|++..+.||+.+.++.+||+|||+++.....
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 171 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE 171 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence 4578999998 77888776432111 2234445555566677788999999999999876432
Q ss_pred ccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.|+..... ...+......... ...+.....
T Consensus 172 -----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~-~~~~~~~~~ 243 (343)
T cd07878 172 -----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY--IDQLKRIMEVVGT-PSPEVLKKI 243 (343)
T ss_pred -----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHhCC-CCHHHHHhc
Confidence 234578999999999877 5689999999999999999999998753221 1111111000000 000000000
Q ss_pred --------cc--cCCCH--------HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 --------LQ--NEVSL--------PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 --------l~--~~~~~--------~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+. ...+. .....+.+++..|++.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 244 SSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred chhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000 112346789999999999999999999875
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=244.51 Aligned_cols=245 Identities=19% Similarity=0.229 Sum_probs=164.1
Q ss_pred CcceeeeeccccceeEEeeeecC---CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKI 597 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~---~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~ 597 (823)
.|++.++||+|+||.||+|.... ++.||+|.+.... ....+.+.+|+.++.+++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 37788999999999999998754 7899999997632 33346788999999999999999999999988 8899
Q ss_pred EEEEcccCCCchhhccCCCcc-c-ccC----------------------HHHHHHHHhcccccc----CCCceeceeece
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-H-LLG----------------------WQLRVRIIDGIAQDQ----HMNPKISDFGMA 649 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-~-~l~----------------------~~~r~~i~~~ia~d~----~~~~KI~DFGla 649 (823)
+||||+++ +|..++...... . .+. +.|+.....+|+.+. ++.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999975 555554321110 0 111 122222234445566 889999999999
Q ss_pred eecCCCcc-ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCcc--------chhHHHH
Q 003402 650 RMFGGDEL-QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF--------NLLGHAW 719 (823)
Q Consensus 650 ~~~~~~~~-~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~--------~l~~~~~ 719 (823)
+.+..... ........+|+.|+|||.+.+. .++.++|||||||+++||++|+.|+.....+.. .+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 87643322 1222345789999999988764 589999999999999999999999864433210 0000000
Q ss_pred hhccCC--------ccccccC---cccccCCC---------H--HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 720 SLCKND--------RAHELMD---PVLQNEVS---------L--PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 720 ~~~~~~--------~~~~l~d---~~l~~~~~---------~--~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.... ...+..+ .......+ . ....++.+++.+|++.||++|||+.|++++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000 0000000 00000001 0 234568899999999999999999998863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-26 Score=247.29 Aligned_cols=227 Identities=26% Similarity=0.376 Sum_probs=164.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+.|+..+.||+|+||.||+++.. ++..||+|.+... .....+++.+|++++++++|||++++++++.++...++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34777789999999999999875 5789999998643 2233467899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||++ |+|.+++.... ..+.+..+..++ .+|+.+.++.+||+|||++.....
T Consensus 105 e~~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 105 EYCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred eCCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 9997 47766654321 123444333322 334446788899999999876432
Q ss_pred ccccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 659 GNTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.....|++.|+|||++. .+.++.++|||||||++|||++|+.|+...... ... ........
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~---~~~~~~~~--------- 241 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SAL---YHIAQNES--------- 241 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHH---HHHHhccC---------
Confidence 22356899999999974 467899999999999999999999987432111 111 11111110
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
...........+.+++.+||+.+|.+||++.+|++.+.-
T Consensus 242 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 242 PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 001111234467889999999999999999999986543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=245.11 Aligned_cols=227 Identities=20% Similarity=0.305 Sum_probs=174.4
Q ss_pred CcceeeeeccccceeEEeeee-cCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~--~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
-|.+.+.||+|.|..|-++++ -.|..||||.+.+..- .....+.+|++.|+-++||||||||.+......+|||+|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 367779999999999999975 4699999999986532 2345688999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc--ccccCHHHHHHHH------------------hcccc-ccCCCceeceeeceeecCCCcccccc
Q 003402 603 MVNKSLDVFLFDPTK--KHLLGWQLRVRII------------------DGIAQ-DQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~--~~~l~~~~r~~i~------------------~~ia~-d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
-.+|+|.+||..... .+.+.-....+|. +|+.- ..-+-+||.|||++..+...+ ..
T Consensus 99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~---kL 175 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK---KL 175 (864)
T ss_pred cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc---hh
Confidence 999999999854322 2222222233333 33222 455679999999997654332 34
Q ss_pred ccccccccccccccccCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFS-VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s-~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
++.+|+..|-|||.+.+..|+ +++||||+|||||-|++|+.||...+.. +.+-.++|-.. .++
T Consensus 176 ~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS--------------ETLTmImDCKY--tvP 239 (864)
T KOG4717|consen 176 TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS--------------ETLTMIMDCKY--TVP 239 (864)
T ss_pred hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch--------------hhhhhhhcccc--cCc
Confidence 568999999999999999996 7899999999999999999998543321 11222333222 345
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....++.+++..|++.||.+|.+.++|+..
T Consensus 240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 240 SHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred hhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 6678899999999999999999999999864
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=237.56 Aligned_cols=240 Identities=24% Similarity=0.321 Sum_probs=165.9
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+|+..++||+|++|.||+|+.. +++.||||.++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999985 488999999875432 23467889999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++ +|..++........+.+.....++ .+|..++++.+||+|||+++.+..... ..
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~ 157 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN--TF 157 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc--cc
Confidence 85 788877543322223443333322 233447788999999999986533211 11
Q ss_pred ccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc---CC------cccccc
Q 003402 662 KRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK---ND------RAHELM 731 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~---~~------~~~~l~ 731 (823)
....+++.|+|||.+.+. .++.++|||||||++|||++|+.|+...... ........... .. ....+.
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE--DQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 234678999999988664 5789999999999999999999987543221 11111111000 00 000000
Q ss_pred Ccccc------cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 732 DPVLQ------NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 732 d~~l~------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..... ..........+.+++..|++.||++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0011123456788999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=240.19 Aligned_cols=240 Identities=22% Similarity=0.273 Sum_probs=164.3
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
|++.++||+|++|.||+|... +++.||||++.... ....+.+.+|+.++++++|||++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 456789999999999999875 58999999986432 223467889999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
+ ++|..++..... ..+.+.....++ .+|..+.++.+||+|||+++.+..... ..
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~ 156 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR--TY 156 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--cc
Confidence 5 689888754331 123444433332 233346788999999999986543211 11
Q ss_pred ccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC--------ccccccC
Q 003402 662 KRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND--------RAHELMD 732 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~--------~~~~l~d 732 (823)
....++..|+|||++.+. .++.++||||||+++|||++|+.|+...... ..+........... ...+...
T Consensus 157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07835 157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235 (283)
T ss_pred CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence 223578899999988764 5799999999999999999999987533211 11111100000000 0000000
Q ss_pred cc------cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PV------LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~------l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. ............+.+++.+|++.+|++||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 236 TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0001112233568889999999999999999998863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-27 Score=255.91 Aligned_cols=221 Identities=19% Similarity=0.233 Sum_probs=156.3
Q ss_pred eccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhc---CCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 533 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL---QHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l---~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
||+|+||+||+|+.. +++.||||++.+.. ......+..|..++.+. +||||+++++.+.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999875 48899999986432 12234456677777665 699999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++...... .......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~g 158 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTTNTFCG 158 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CCccCccC
Confidence 9998887543211 22233344455566667889999999999997643222 12334679
Q ss_pred cccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 667 TYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 667 t~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
|+.|||||++.+. .++.++|||||||++|||++|+.|+...... .+ ......+.. .+ .. .....
T Consensus 159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~--~~----~~~i~~~~~-~~-----~~---~~~~~ 223 (330)
T cd05586 159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--QM----YRNIAFGKV-RF-----PK---NVLSD 223 (330)
T ss_pred CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH--HH----HHHHHcCCC-CC-----CC---ccCCH
Confidence 9999999998765 4899999999999999999999997532211 11 111111100 00 00 11234
Q ss_pred HHHHHHHHccccCcCCCCC----HHHHHH
Q 003402 746 RYINVALLCVQENAEDRPT----MSDVVS 770 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt----~~evl~ 770 (823)
.+.+++..||+.||.+||+ +.++++
T Consensus 224 ~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 224 EGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 5678999999999999984 555554
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=237.82 Aligned_cols=220 Identities=20% Similarity=0.280 Sum_probs=162.9
Q ss_pred eccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
||+|+||.||+++... ++.||+|.+.... ....+.+.+|+.++++++||||+++++.+.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 7999999999999864 8899999986532 23456799999999999999999999999999999999999999999
Q ss_pred hhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 609 DVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 609 ~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
.+++..... +....... ...+|+.+.++.+||+|||+++...... ......|
T Consensus 81 ~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~ 154 (262)
T cd05572 81 WTILRDRGL---FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCG 154 (262)
T ss_pred HHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccccC
Confidence 999864322 22222211 2234445788899999999998765432 1223578
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
+..|+|||.+....++.++||||||+++|||++|+.|+.....+...... .... .......+......
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~---------~~~~~~~~~~~~~~ 222 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYN---DILK---------GNGKLEFPNYIDKA 222 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHH---HHhc---------cCCCCCCCcccCHH
Confidence 99999999998888999999999999999999999998644322111111 1100 00011122222567
Q ss_pred HHHHHHHccccCcCCCCC-----HHHHHH
Q 003402 747 YINVALLCVQENAEDRPT-----MSDVVS 770 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt-----~~evl~ 770 (823)
+.+++..||+.+|++||+ +.|+++
T Consensus 223 ~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 223 AKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 889999999999999999 566554
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-26 Score=238.36 Aligned_cols=233 Identities=19% Similarity=0.237 Sum_probs=181.6
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||.|.-|+||++++.+ +...|+|.+.+.. .....+...|-+||+.++||-|..||+.+..++..+|||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 567888999999999999999876 5899999998653 334556778999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCC-----
Q 003402 601 EYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGG----- 654 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~----- 654 (823)
|||++|+|..+++..... |.+++..|+.+.+||+..+++++.|+||-|+.....
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~ 236 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV 236 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence 999999999988654332 567777888888999999999999999999853210
Q ss_pred -----------------------------Cc--------------------cccccccccccccccccccccCCCCCchh
Q 003402 655 -----------------------------DE--------------------LQGNTKRIVGTYGYMSPEYALEGVFSVKS 685 (823)
Q Consensus 655 -----------------------------~~--------------------~~~~~~~~~Gt~~YmAPE~~~~~~~s~ks 685 (823)
.. ....+..++||-.|+|||++.+.-.+.++
T Consensus 237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV 316 (459)
T KOG0610|consen 237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV 316 (459)
T ss_pred ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence 00 00122347899999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCC-
Q 003402 686 DVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT- 764 (823)
Q Consensus 686 DVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt- 764 (823)
|-|+|||+||||+.|+.||-..+.+.. +..++-..+.=.-.......+.+++...|.+||.+|-.
T Consensus 317 DWWtfGIflYEmLyG~TPFKG~~~~~T--------------l~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 317 DWWTFGIFLYEMLYGTTPFKGSNNKET--------------LRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred hHHHHHHHHHHHHhCCCCcCCCCchhh--------------HHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhcc
Confidence 999999999999999999854433210 11111111110111244567888999999999999998
Q ss_pred ---HHHHHHH
Q 003402 765 ---MSDVVSM 771 (823)
Q Consensus 765 ---~~evl~~ 771 (823)
+.||-+.
T Consensus 383 ~rGA~eIK~H 392 (459)
T KOG0610|consen 383 KRGAAEIKRH 392 (459)
T ss_pred ccchHHhhcC
Confidence 8887664
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=242.24 Aligned_cols=232 Identities=24% Similarity=0.375 Sum_probs=164.4
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|...++||+|+||.||++.... ++.||+|.+.... ......+.+|+.++.++. ||||+++++++...+..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 45666899999999999998754 7899999987532 234567899999999996 99999999999999999999999
Q ss_pred ccCCCchhh---ccCCCcc---------------------c-ccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 603 MVNKSLDVF---LFDPTKK---------------------H-LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 603 ~~~gsL~~~---l~~~~~~---------------------~-~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+.. +|..+ +...... | .....|+...+.+|+.+.++.+||+|||+++.+.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 163 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence 864 44332 2111100 0 01233444445556667788999999999986543221
Q ss_pred ccccccccccccccccccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEG---VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~---~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.....|++.|+|||.+... .++.++|||||||++|||++|+.|+.... ............. .+.
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~------~~~ 230 (288)
T cd06616 164 ---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGD------PPI 230 (288)
T ss_pred ---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCC------CCc
Confidence 1234689999999998776 68999999999999999999999975332 1111111111110 111
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+...........+.+++.+||+.+|++||++.+|+..
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112222345678899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=240.98 Aligned_cols=240 Identities=20% Similarity=0.248 Sum_probs=166.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~lV 599 (823)
++|++.+.||+|+||.||+|... +++.+|+|.++... ......+.+|+.++.+++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999986 47899999997432 22234678899999999999999999999887 899999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||++ ++|..++..... .+.+..... ...+|..+.++.+||+|||+++.+....
T Consensus 85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 160 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL- 160 (293)
T ss_pred ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-
Confidence 99997 488887754221 233333222 2334455788899999999998765432
Q ss_pred ccccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc-----------C-
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK-----------N- 724 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~-----------~- 724 (823)
.......+++.|||||.+.+.. ++.++||||||+++|||++|+.|+...... .........+. .
T Consensus 161 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 -KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI--DQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred -cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCchHHHHHhhcc
Confidence 1122346789999999987654 689999999999999999999987543221 11111000000 0
Q ss_pred -----CccccccCcccccCCCHH-HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 -----DRAHELMDPVLQNEVSLP-MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 -----~~~~~l~d~~l~~~~~~~-~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..........+...++.. ....+.+++..||+.+|++|||+.|++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000001111111112211 35567889999999999999999999863
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-25 Score=234.33 Aligned_cols=225 Identities=21% Similarity=0.230 Sum_probs=168.2
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
+|++.+.||+|+||.||+++.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999876 48899999997532 2456789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|..++.... .+....... .+.+|..++++.+||+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--- 154 (258)
T cd05578 81 LLLGGDLRYHLSQKV---KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--- 154 (258)
T ss_pred CCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc---
Confidence 999999999885431 122222222 2233444788899999999998764432
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......|+..|+|||.+....++.++||||||+++|||++|+.|+.......... ....... .....
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~----------~~~~~ 221 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQ---IRAKQET----------ADVLY 221 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHH---HHHHhcc----------ccccC
Confidence 1233568899999999998889999999999999999999999986443221111 0000000 00112
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCH--HHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTM--SDVV 769 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~--~evl 769 (823)
+......+.+++.+||+.||.+||++ +|++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 222 PATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 22234678889999999999999999 5554
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=241.54 Aligned_cols=242 Identities=20% Similarity=0.256 Sum_probs=160.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-------
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG------- 594 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~------- 594 (823)
++|++.++||+|+||.||+|+.. +++.||||.+.... ......+.+|++++++++||||++++++|...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 57899999999999999999875 48899999886432 222345678999999999999999999987654
Q ss_pred -eEEEEEEcccCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceee
Q 003402 595 -EKILIYEYMVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 595 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
..++||||+.+ +|..++..... .+.+.. +...+.+|+.+.++.+||+|||++..
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 45999999975 77766643221 122222 22223344457788999999999987
Q ss_pred cCCCccc--cccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC---C
Q 003402 652 FGGDELQ--GNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN---D 725 (823)
Q Consensus 652 ~~~~~~~--~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~---~ 725 (823)
+...... .......++..|+|||.+.+.. ++.++||||||+++|||++|+.|+...... ............ .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLISQLCGSITPE 246 (310)
T ss_pred ccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChh
Confidence 6432211 1122346788999999887654 789999999999999999999887533221 111111111100 0
Q ss_pred -----ccccccCcc-cccC---------CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 -----RAHELMDPV-LQNE---------VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 -----~~~~l~d~~-l~~~---------~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+..+.. .... ........+.+++..||+.||++|||+.++++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000000000 0000 000123456789999999999999999998863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=245.56 Aligned_cols=241 Identities=23% Similarity=0.288 Sum_probs=165.5
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC--CeEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ--GEKI 597 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~--~~~~ 597 (823)
.++|++.+.||+|+||.||+|... +++.||||++... .......+.+|+.++.++ +||||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 367888899999999999999876 4789999988542 233445688899999999 999999999998653 4689
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||++ ++|..++... .+.+.... ..+.+|+.+.++.+||+|||+++.+...
T Consensus 86 lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 9999997 5888877543 22232222 2223444578899999999999876443
Q ss_pred ccc---cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc---------
Q 003402 656 ELQ---GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC--------- 722 (823)
Q Consensus 656 ~~~---~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~--------- 722 (823)
... .......||..|||||.+.. ..++.++||||||+++|||++|+.|+...... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 161 EENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL--NQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred cccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHH
Confidence 221 22334678999999998765 45789999999999999999999987532211 1110000000
Q ss_pred --cCCccccccCcccc------cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 723 --KNDRAHELMDPVLQ------NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 723 --~~~~~~~l~d~~l~------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......++++.... ..........+.+++.+||+.||++|||+.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000011110000 00011134568899999999999999999999875
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=245.77 Aligned_cols=242 Identities=22% Similarity=0.234 Sum_probs=168.1
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------C
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------G 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~ 594 (823)
.+.|+..+.||+|+||.||+++.. +++.||||.+... .....+++.+|+.++++++||||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 367999999999999999999865 5889999998643 233456788999999999999999999998643 3
Q ss_pred eEEEEEEcccCCCchhhccCCCc-----------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK-----------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~-----------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
..++||||+.+ +|...+...-. .|..+..|+...+.||+.+.++.+||+|||+++.......
T Consensus 95 ~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 173 (353)
T cd07850 95 DVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 173 (353)
T ss_pred cEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC
Confidence 57999999964 77766543210 0112223333344556668889999999999987644321
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHh-----------------
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS----------------- 720 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~----------------- 720 (823)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... ........
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 174 ---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI--DQWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred ---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHhcCCCCHHHHHHhhhhh
Confidence 22356899999999999999999999999999999999999987533210 00000000
Q ss_pred --hccCC------ccccccCccc----ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 721 --LCKND------RAHELMDPVL----QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 721 --~~~~~------~~~~l~d~~l----~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..... ...++....+ ...........+.+++.+||+.||++|||+.|++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 0011111111 011112235567899999999999999999999875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-26 Score=253.50 Aligned_cols=224 Identities=21% Similarity=0.315 Sum_probs=169.2
Q ss_pred eeeeeccccceeEEeeeecC-CcEEEEEEec--c--CChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe--EEEEEE
Q 003402 529 IQSKLGEGGFGPVYKGRLLN-GQEVAVKRLS--N--QSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE--KILIYE 601 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~--~--~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~--~~lV~E 601 (823)
..++||+|+|-+||||.... |.+||--.++ + .+....+.|..|+.+|+.|+|||||+++..+.+... .-+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 34899999999999998754 7778743332 1 245567899999999999999999999999988655 778999
Q ss_pred cccCCCchhhccCCCc---------------------ccccCHHHHHHHHhcccc-ccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTK---------------------KHLLGWQLRVRIIDGIAQ-DQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~---------------------~~~l~~~~r~~i~~~ia~-d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
.|..|+|..|+....+ .+..+..||+.++.||.. ...+.+||+|.|||+.+....
T Consensus 124 L~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~--- 200 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH--- 200 (632)
T ss_pred cccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc---
Confidence 9999999998754322 134566777878888876 467899999999999875433
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
...+.|||.|||||... ..|.+.+||||||+.++||+|+..|+..... ....|+....+....-+. .+
T Consensus 201 -aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n-----~AQIYKKV~SGiKP~sl~-----kV 268 (632)
T KOG0584|consen 201 -AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN-----PAQIYKKVTSGIKPAALS-----KV 268 (632)
T ss_pred -cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC-----HHHHHHHHHcCCCHHHhh-----cc
Confidence 23479999999999765 7899999999999999999999999864332 223333333332222111 11
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ..++.+|+..|+.. ..+|||+.|++..
T Consensus 269 ~---dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 269 K---DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred C---CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 1 23566789999998 9999999999874
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-25 Score=258.44 Aligned_cols=246 Identities=19% Similarity=0.272 Sum_probs=161.2
Q ss_pred HhcCcceeeeeccccceeEEeeeecC--CcEEEEE------------------EeccCChhhHHHHHHHHHHHHhcCCCc
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN--GQEVAVK------------------RLSNQSGQGLKEFKNEMMLIAKLQHRN 582 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~--~~~VAVK------------------~l~~~~~~~~~~f~~Ev~~l~~l~H~N 582 (823)
..++|++.++||+|+||+||++.+.. +..+++| .+.. .....+.+.+|+.++.+++|||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCC
Confidence 34789999999999999999987542 2222222 1111 1223457899999999999999
Q ss_pred eeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCc------------------------ccccCHHHHHHHHhccccccC
Q 003402 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK------------------------KHLLGWQLRVRIIDGIAQDQH 638 (823)
Q Consensus 583 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------------------------~~~l~~~~r~~i~~~ia~d~~ 638 (823)
||++++++.+.+..++|+|++. ++|..++..... .|..++.||+.+..||+.+.+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 9999999999999999999985 455555432211 022334445555667777889
Q ss_pred CCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCC-CCCCCCc-cchhH
Q 003402 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT-GVYNTDS-FNLLG 716 (823)
Q Consensus 639 ~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~-~~~~~~~-~~l~~ 716 (823)
+.+||+|||+++.+...... ......||+.|||||++.+..++.++|||||||++|||++|+.++ ....... ..+..
T Consensus 304 ~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 99999999999877543221 223467999999999999999999999999999999999987543 2222111 11111
Q ss_pred HHHhhc--cCC------ccccccCcc-cc---cCC-----CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 717 HAWSLC--KND------RAHELMDPV-LQ---NEV-----SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 717 ~~~~~~--~~~------~~~~l~d~~-l~---~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...... ... +..+.++.. +. ... .......+.+++.+|++.||++|||+.|++.+
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 111000 000 000000000 00 000 00112345667889999999999999999875
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=238.81 Aligned_cols=241 Identities=21% Similarity=0.275 Sum_probs=162.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 56889999999999999999876 58899999986432 2334678899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHH----HHHHHh------------------ccccc-cCCCceeceeeceeecCCCccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQL----RVRIID------------------GIAQD-QHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~----r~~i~~------------------~ia~d-~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|++ ++|..++...... ...... ..+++. +|..+ .+..+||+|||+++......
T Consensus 82 ~~~-~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-- 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDF-AKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-- 157 (294)
T ss_pred ccc-ccHHHHHHhCCCC-CcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--
Confidence 996 5777766432211 112211 122322 22234 34568999999998654321
Q ss_pred cccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---------ccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---------RAH 728 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---------~~~ 728 (823)
.......|++.|+|||++.+. .++.++|||||||++|||+||+.|+...... ............. ...
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 158 RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI--DELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChhhccccccch
Confidence 112234678999999988764 5799999999999999999999987532211 1111111110000 000
Q ss_pred cccC------cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 ELMD------PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 ~l~d------~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+... +.............+.+++.+|++.+|++||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 000000111234567889999999999999999999874
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=240.34 Aligned_cols=242 Identities=20% Similarity=0.244 Sum_probs=162.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~l 598 (823)
.++|++.++||+|+||.||+|... +++.||+|.++... ......+.+|+.++.+++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 367899999999999999999875 48999999986432 12234567899999999999999999998765 56899
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+.+ +|..++.... ..+.+.....+ +.+|..+.++.+||+|||+++......
T Consensus 86 v~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 9999974 7777765322 12333332222 233444778899999999998765432
Q ss_pred cccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC--cc------
Q 003402 657 LQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND--RA------ 727 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~--~~------ 727 (823)
. ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.|+..... .............. ..
T Consensus 163 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 163 K--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred C--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChhhchhhhc
Confidence 1 1122346888999999875 4579999999999999999999998753221 11111111110000 00
Q ss_pred ---cccc--CcccccC---CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 728 ---HELM--DPVLQNE---VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 728 ---~~l~--d~~l~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
.... ....... ........+.+++..|++.||++|||+.+++..-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 0000 0000000 0001245567899999999999999999999753
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-25 Score=236.63 Aligned_cols=242 Identities=21% Similarity=0.261 Sum_probs=162.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCe-----
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGE----- 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~----- 595 (823)
++|++.+.||+|+||.||+|+.. +++.||||.++... ....+.+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999875 48899999876432 223467889999999995 6999999999987665
Q ss_pred EEEEEEcccCCCchhhccCCCcc--cccCHHHHHHHH----------------------hcccccc-CCCceeceeecee
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRII----------------------DGIAQDQ-HMNPKISDFGMAR 650 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~--~~l~~~~r~~i~----------------------~~ia~d~-~~~~KI~DFGla~ 650 (823)
.++||||+++ +|..++...... ..+.+.....++ .+|..+. ++.+||+|||+++
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 8999999985 788877532211 122333332222 2333456 7889999999998
Q ss_pred ecCCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc---
Q 003402 651 MFGGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR--- 726 (823)
Q Consensus 651 ~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~--- 726 (823)
.+..... ......+++.|+|||++.+ ..++.++||||||+++|||++|..|+....... .+. ..........
T Consensus 160 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 235 (295)
T cd07837 160 AFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLL-HIFKLLGTPTEQV 235 (295)
T ss_pred ecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHH-HHHHHhCCCChhh
Confidence 6533211 1122357889999998865 457999999999999999999998875322111 111 1111000000
Q ss_pred ---cccccC----cc----cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 ---AHELMD----PV----LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ---~~~l~d----~~----l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..++.+ +. ...........++.+++..||+.||.+||++.|++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000 00 0000011234567889999999999999999998763
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-25 Score=232.00 Aligned_cols=225 Identities=25% Similarity=0.359 Sum_probs=169.3
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.+.||+|++|.||+++.. +++.||+|.+..... ...+.+.+|++++.+++|||++++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4678899999999999999876 478999999976543 4567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++.... .+.+..... ...+|..+.++.+||+|||+++........
T Consensus 81 ~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 155 (254)
T cd06627 81 AENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-- 155 (254)
T ss_pred CCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--
Confidence 99999999885431 223332222 223344467788999999999877543221
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....|+..|+|||.+....++.++||||+|+++|||++|+.|+...... ...+..... .. ...+
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~-~~---------~~~~ 220 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM-----AALFRIVQD-DH---------PPLP 220 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHhcc-CC---------CCCC
Confidence 23357899999999998888999999999999999999999987532211 111111100 00 1112
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
......+.+++.+|++.+|++||++.+++.
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 221 EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 223456788999999999999999999875
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-25 Score=233.22 Aligned_cols=227 Identities=23% Similarity=0.332 Sum_probs=169.5
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.++||+|+||.||+++.. +++.+|+|.+... ......++.+|++++++++|+||+++++++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999765 5789999998753 233456788999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc-ccccCHHHHHHH----H------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPTK-KHLLGWQLRVRI----I------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~-~~~l~~~~r~~i----~------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
+++++|..++..... ...+.+.....+ + .+|..+++..+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN---- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC----
Confidence 999999998854211 122333332222 2 2333466788999999999877544
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......|++.|+|||.+.+..++.++|+||||+++|||++|+.|+...... .+. .. ...+.. ...
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~---~~-~~~~~~---------~~~ 221 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLR---YK-VQRGKY---------PPI 221 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH---HH-HhcCCC---------CCC
Confidence 122346889999999999999999999999999999999999997543211 111 01 111111 112
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+......+.+++..|++.+|++||++.++++.
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred chhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 22345668899999999999999999999873
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=246.90 Aligned_cols=241 Identities=20% Similarity=0.246 Sum_probs=164.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~~ 596 (823)
++|.+.+.||+|+||.||+++.. +++.||||.+... .....+++.+|+.++.+++|+||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 56889999999999999999865 4889999998653 233456788999999999999999999988654 358
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++|+||+. ++|..++...... |...+.|+.....+|+.+.++.+||+|||+++......
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~- 162 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG- 162 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc-
Confidence 99999996 6787777543211 11111222223344555788899999999998764332
Q ss_pred ccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc-----------CC
Q 003402 658 QGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK-----------ND 725 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~-----------~~ 725 (823)
.......|+..|+|||.+.. ..++.++|||||||++|||++|+.|+...... ........... ..
T Consensus 163 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 163 -DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV--HQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred -ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhCCCChHHhhhcCch
Confidence 11223568899999998865 46899999999999999999999987532211 11111110000 00
Q ss_pred cccccc-------CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 RAHELM-------DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 ~~~~l~-------d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+.+ ++... .........+.+++.+||+.+|++||++.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 240 KARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000 00000 0011234667899999999999999999999886
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=236.41 Aligned_cols=236 Identities=20% Similarity=0.268 Sum_probs=160.6
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeC--CeEEEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQ--GEKILIYE 601 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~--~~~~lV~E 601 (823)
|++.++||+|+||.||+|+.. +++.||+|+++... ........+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567799999999999999865 48899999987532 222234567999999985 99999999999987 89999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|++ ++|.+++.... ..+.+.....++ .+|..+. +.+||+|||+++.+.....
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~-- 154 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP-- 154 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC--
Confidence 997 57777765422 123443333332 2333456 8999999999987643321
Q ss_pred ccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc-----------cCCcc
Q 003402 660 NTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC-----------KNDRA 727 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~-----------~~~~~ 727 (823)
.....++..|+|||.+.. ..++.++|||||||++|||++|+.|+..... ........... .....
T Consensus 155 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 155 -YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred -cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 123568899999997654 5578999999999999999999998854321 11111111110 00000
Q ss_pred ccccCccccc----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELMDPVLQN----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.... .........+.+++..||+.+|++||++.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000000000 0011235778999999999999999999998863
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-25 Score=234.25 Aligned_cols=231 Identities=23% Similarity=0.284 Sum_probs=165.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-----SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~ 596 (823)
++|.+.+.||+|+||.||+|+.. +++.||+|.+... ..+..+.|.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 57889999999999999999865 4889999987532 233456899999999999999999999998764 568
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++|+||+++++|.+++...... |.....|+...+.+|..+.++.+||+|||+++.+.....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 8999999999999888542211 001111112223344457788999999999986532111
Q ss_pred -ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 658 -QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 658 -~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
........|+..|+|||++.+..++.++|||||||++|||++|+.|+...... .......... ..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~---------~~ 227 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM-----AAIFKIATQP---------TK 227 (264)
T ss_pred cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH-----HHHHHHHcCC---------CC
Confidence 11122456899999999999888999999999999999999999997532110 0011111010 11
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
...+......+.+++..|++ +|..||+..+++.
T Consensus 228 ~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 12233445678889999999 5799999998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=240.57 Aligned_cols=226 Identities=20% Similarity=0.284 Sum_probs=164.3
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCch
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLD 609 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 609 (823)
.+||+|+||.||++... +++.||||.+........+.+.+|+.++++++|+|++++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 68999999999999875 58899999987555555677999999999999999999999999999999999999999999
Q ss_pred hhccCCCcccc------------------cCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccccccc
Q 003402 610 VFLFDPTKKHL------------------LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671 (823)
Q Consensus 610 ~~l~~~~~~~~------------------l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~Ym 671 (823)
+++........ .+..|+.....||..+.++.+||+|||++..+..... ......|++.|+
T Consensus 106 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~ 183 (292)
T cd06657 106 DIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWM 183 (292)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--cccccccCcccc
Confidence 88754321100 1111111222344457788999999999876643321 122356899999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHH
Q 003402 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVA 751 (823)
Q Consensus 672 APE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~ 751 (823)
|||++....++.++|||||||++|||++|+.|+..... ........ .. ..+.+.. .......+.+++
T Consensus 184 ~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~----~~-----~~~~~~~--~~~~~~~l~~li 250 (292)
T cd06657 184 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIR----DN-----LPPKLKN--LHKVSPSLKGFL 250 (292)
T ss_pred CHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH----hh-----CCcccCC--cccCCHHHHHHH
Confidence 99999888899999999999999999999999753211 11111110 00 0011100 011234567889
Q ss_pred HHccccCcCCCCCHHHHHHH
Q 003402 752 LLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 752 ~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+||+.+|.+||++.+|++.
T Consensus 251 ~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 251 DRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHhCCcccCcCHHHHhcC
Confidence 99999999999999998874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=242.40 Aligned_cols=225 Identities=28% Similarity=0.384 Sum_probs=161.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+.|+..+.||+|+||.||+|+.. +++.||+|.+... .....+++.+|++++++++|+|++++++++.+....++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666789999999999999875 4788999998632 2334567889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+. |+|..++..... .+....... ...+|+.+.++.+||+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred EccC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 9997 577666542221 122222222 223444467889999999999875432
Q ss_pred ccccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 659 GNTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
....|++.|+|||.+. ...++.++|||||||++|||++|+.|+...... ... ...... .. +.
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~---~~~~~~-~~-----~~- 233 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SAL---YHIAQN-ES-----PA- 233 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--HHH---HHHhhc-CC-----CC-
Confidence 2356899999999974 356889999999999999999999986432111 110 111010 00 00
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
.........+.+++.+||+.+|++||++.+|+...
T Consensus 234 --~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 234 --LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred --cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 01112345677899999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-25 Score=239.03 Aligned_cols=243 Identities=23% Similarity=0.312 Sum_probs=164.7
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC----
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG---- 594 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~---- 594 (823)
...++|++.++||+|+||.||+|.... ++.||||.++... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 345789999999999999999999864 7899999996432 223456788999999999999999999987654
Q ss_pred ------eEEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceecee
Q 003402 595 ------EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDF 646 (823)
Q Consensus 595 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DF 646 (823)
..++|+||+++ +|..++.... ..+.+.....+ ..+|..++++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcc
Confidence 78999999986 5656554321 12333332222 23344477889999999
Q ss_pred eceeecCCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
|+++.+..... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.|+..... ...+..........
T Consensus 161 g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~--~~~~~~~~~~~~~~ 237 (302)
T cd07864 161 GLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE--LAQLELISRLCGSP 237 (302)
T ss_pred cccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCC
Confidence 99987644321 11122356889999998865 4578999999999999999999988753221 11111111111110
Q ss_pred c---ccccc--------Cc------ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 R---AHELM--------DP------VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 ~---~~~l~--------d~------~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ..++. ++ ...... ......+.+++..||+.+|.+||++.+|+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred Chhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 00000 00 000000 0124568899999999999999999998763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.1e-26 Score=230.57 Aligned_cols=223 Identities=20% Similarity=0.234 Sum_probs=169.0
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
-++|...++||+|.||+|-+++-+ .++.+|+|+|++... .....-+.|-++|...+||.+..|.-.+...++++.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 367888999999999999999765 589999999986532 2334567799999999999999999889999999999
Q ss_pred EEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 600 YEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
|||..+|.|.-+|..... .|......|+.+..|++.|.++++||+||||.|.-- .....
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I--~~g~t 324 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI--KYGDT 324 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc--cccce
Confidence 999999999887754211 133344556777888999999999999999998532 22345
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
+++++|||.|+|||++.+..|+.++|-|.+||++|||++|+.||.....+ .+..... ..++ .++
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--kLFeLIl-------~ed~-------kFP 388 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--KLFELIL-------MEDL-------KFP 388 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--HHHHHHH-------hhhc-------cCC
Confidence 67799999999999999999999999999999999999999998432211 1111100 0111 122
Q ss_pred HHHHHHHHHHHHHccccCcCCCCC
Q 003402 741 LPMLVRYINVALLCVQENAEDRPT 764 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt 764 (823)
.....+...+..-.+..||.+|..
T Consensus 389 r~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 389 RTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred ccCCHHHHHHHHHHhhcChHhhcC
Confidence 223344555666778899999953
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-25 Score=237.47 Aligned_cols=237 Identities=22% Similarity=0.297 Sum_probs=167.8
Q ss_pred CcceeeeeccccceeEEeeeec----CCcEEEEEEeccCC----hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~~----~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~ 596 (823)
+|++.+.||+|+||.||+++.. +++.||||.+++.. ....+.+.+|+.++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4778899999999999999753 46789999986432 22346788999999999 599999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++||||+++|+|..++...... |..+..|+.....+|..+.++.+||+|||+++.+.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE 160 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence 9999999999999888543210 001111122223344457788899999999987644321
Q ss_pred ccccccccccccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~--~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
. ......|+..|+|||.+.+.. .+.++||||||+++|||++|+.|+....... .............
T Consensus 161 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~---------- 228 (288)
T cd05583 161 E-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEISRRILKSK---------- 228 (288)
T ss_pred c-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHHHHHHHccC----------
Confidence 1 122356899999999987665 7899999999999999999999975322111 0111111111100
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+......+.+++.+||+.||++|||+.++.+.|+..
T Consensus 229 -~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 229 -PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred -CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 011122334577899999999999999999998887654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=234.11 Aligned_cols=226 Identities=19% Similarity=0.251 Sum_probs=165.5
Q ss_pred eccccceeEEeeeecC-CcEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG---QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
||+|+||.||+++... ++.+|+|.+..... ...+.+.+|+.++.+++||||+++++.+..+...++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999875 89999999875432 4556899999999999999999999999999999999999999999
Q ss_pred hhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc------ccc
Q 003402 609 DVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL------QGN 660 (823)
Q Consensus 609 ~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~------~~~ 660 (823)
.+++.... .+....+..+ +.+|..+.++.+||+|||++........ ...
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 99886432 1222222222 2344447888999999999986533211 112
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....++..|+|||.......+.++||||||+++|||++|+.|+...... .. .... ..+.. .....
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~---~~~~-~~~~~--------~~~~~ 223 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--EI---FQNI-LNGKI--------EWPED 223 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HH---HHHH-hcCCc--------CCCcc
Confidence 23456889999999999888999999999999999999999997533211 11 1111 00000 00000
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+..++..||+.+|++|||+.++.+.|+..
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~ 258 (265)
T cd05579 224 VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHP 258 (265)
T ss_pred ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCc
Confidence 01245678899999999999999997777776543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-25 Score=236.58 Aligned_cols=229 Identities=21% Similarity=0.345 Sum_probs=161.9
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||.||+|...+ ++.||||.++... .....++..|+.++.+.+ ||||+++++++.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 668888999999999999999875 8899999997542 234456778888777775 9999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHH-----------------------HHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQ-----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~-----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|+++ +|..++..... .+.+. |+...+.+|+.++++.+||+|||++..+......
T Consensus 95 ~~~~-~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~ 171 (296)
T cd06618 95 LMST-CLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK 171 (296)
T ss_pred ccCc-CHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcc
Confidence 9854 56555433111 22222 2222233445578889999999999866432211
Q ss_pred cccccccccccccccccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGV----FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~----~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
....|+..|+|||.+.... ++.++||||||+++|||++|+.|+.....+ ...+. ...... ...+
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~---~~~~~~-~~~~---- 239 (296)
T cd06618 172 ---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-FEVLT---KILQEE-PPSL---- 239 (296)
T ss_pred ---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-HHHHH---HHhcCC-CCCC----
Confidence 2245788999999987554 889999999999999999999997532211 11111 111111 0000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. .......++.+++.+||+.||++||++.+++++
T Consensus 240 -~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 240 -P--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -C--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 011234567889999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=228.97 Aligned_cols=229 Identities=22% Similarity=0.350 Sum_probs=171.4
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|++.+.||+|+||.||++... +++.||+|++.... ....+++.+|++++++++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999876 48899999997543 24567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc-ccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPTK-KHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~-~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
+++++|..++..... ...+.+.....++ .+|..+.++.+||+|||++....... .
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~ 158 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--D 158 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--c
Confidence 999999998865321 1223333332222 23334677899999999998765433 1
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......|++.|+|||.+....++.++||||+|++++||++|+.|+..... ....... ...... ..
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~-~~~~~~---------~~ 223 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKI-LKGQYP---------PI 223 (258)
T ss_pred eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHH-hcCCCC---------CC
Confidence 22335789999999999998999999999999999999999998743321 1111111 111111 11
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+......+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11334567889999999999999999998863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-25 Score=232.91 Aligned_cols=242 Identities=22% Similarity=0.268 Sum_probs=173.7
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hh-HHHHHHHHHHHHhcCCCc-eeeEEeEEEeCC------
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QG-LKEFKNEMMLIAKLQHRN-LVRLLGCCIEQG------ 594 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~-~~~f~~Ev~~l~~l~H~N-iv~l~g~~~~~~------ 594 (823)
..|...++||+|.||+||+|+.. +|+.||+|+++.... ++ ...-.+|+.++++++|+| ||+|++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 44666688999999999999865 589999999975433 22 245689999999999999 999999999877
Q ss_pred eEEEEEEcccCCCchhhccCCCc-----------------------ccccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK-----------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~-----------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
..+||+||+.. +|..++..... .|.....||+.+++||+.++.+.+||+|||+|+.
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 78899999854 67666644321 1445566777788899999999999999999996
Q ss_pred cCCCccccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---cc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---RA 727 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---~~ 727 (823)
..-.. ....+.++|..|.|||++.+. .|++..||||+|||+.||+++++-|....+ .+.+....+..... ..
T Consensus 170 ~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se--~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 170 FSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE--IDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHHcCCCCccCC
Confidence 54221 123456889999999999987 699999999999999999998876643322 23333333322111 11
Q ss_pred cccc-----CcccccCC-CH-------HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELM-----DPVLQNEV-SL-------PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~-----d~~l~~~~-~~-------~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+. +....... +. .......+++.+|++.+|.+|.++...+.+
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1100 00000000 00 011367889999999999999999998886
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-25 Score=235.47 Aligned_cols=232 Identities=22% Similarity=0.306 Sum_probs=164.1
Q ss_pred CcceeeeeccccceeEEeeee----cCCcEEEEEEeccCC----hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~----~~~~~VAVK~l~~~~----~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~ 596 (823)
+|++.+.||+|+||.||+++. .+++.||+|.+.... ....+++.+|+.++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999976 368899999987532 22346788999999999 599999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++|+||+++++|.+++...... |..+..|+...+.+|+.+.++.+||+|||+++.+.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 9999999999999988543211 111111222223345557889999999999987644322
Q ss_pred ccccccccccccccccccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEG--VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~--~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
. ......|+..|+|||.+... .++.++||||||+++|||++|+.|+...... ..............
T Consensus 161 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~~---------- 228 (290)
T cd05613 161 E-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSE---------- 228 (290)
T ss_pred c-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHHHhhccC----------
Confidence 1 22245689999999998753 4788999999999999999999997532111 11111111111110
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRP-----TMSDVVS 770 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~ 770 (823)
...+......+.+++..||+.||++|| ++.+++.
T Consensus 229 -~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 -PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 011222345677899999999999997 5666654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-25 Score=233.15 Aligned_cols=226 Identities=19% Similarity=0.212 Sum_probs=158.1
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccCCh---hhHHHHHHHHHHH-HhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLKEFKNEMMLI-AKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~---~~~~~f~~Ev~~l-~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
+.||+|+||.||+|... +++.||||.+.+... .....+..|..++ ...+|+|++++++++.+++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999875 488999999875421 2233455565544 455899999999999999999999999999
Q ss_pred CCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 606 KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 606 gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
++|..++...... |..++.|+.....+|..+.++.+||+|||+++.... .....|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~ 155 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NKKFVG 155 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cccCCC
Confidence 9999988543211 001111111222344447788999999999986533 223568
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
++.|+|||.+.+..++.++||||||+++|||++|..|+...... .. +......... ............
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~----~~~~~~~~~~------~~~~~~~~~~~~ 223 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--AV----FDNILSRRIN------WPEEVKEFCSPE 223 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--HH----HHHHHhcccC------CCCcccccCCHH
Confidence 89999999998888999999999999999999999998533211 11 1110111000 000111123456
Q ss_pred HHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 747 YINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
+.+++..||+.+|++||++.++.+.|..
T Consensus 224 ~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 224 AVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred HHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 8899999999999999988777776644
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=235.52 Aligned_cols=240 Identities=16% Similarity=0.160 Sum_probs=158.0
Q ss_pred cCcceeeeeccccceeEEeeeecCC----cEEEEEEeccCChhh-----------HHHHHHHHHHHHhcCCCceeeEEeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNG----QEVAVKRLSNQSGQG-----------LKEFKNEMMLIAKLQHRNLVRLLGC 589 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~----~~VAVK~l~~~~~~~-----------~~~f~~Ev~~l~~l~H~Niv~l~g~ 589 (823)
+.|++.++||+|+||+||+|...+. ..+|+|......... ......+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999987553 456666533221111 0112334445667799999999998
Q ss_pred EEeCC----eEEEEEEcccCCCchhhccCCC-------------------cccccCHHHHHHHHhccccccCCCceecee
Q 003402 590 CIEQG----EKILIYEYMVNKSLDVFLFDPT-------------------KKHLLGWQLRVRIIDGIAQDQHMNPKISDF 646 (823)
Q Consensus 590 ~~~~~----~~~lV~Ey~~~gsL~~~l~~~~-------------------~~~~l~~~~r~~i~~~ia~d~~~~~KI~DF 646 (823)
+.... ..++++|++.. ++...+.... ..|..+..||+..+.||+.+.++.+||+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 76543 45678887643 3433332211 013344556666677888888999999999
Q ss_pred eceeecCCCcc-----ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh
Q 003402 647 GMARMFGGDEL-----QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL 721 (823)
Q Consensus 647 Gla~~~~~~~~-----~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~ 721 (823)
|+|+.+..+.. ........||+.|||||...+..++.++|||||||++|||++|+.|+....... .+.......
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~~~~~~~~ 249 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NLIHAAKCD 249 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HHHHHhHHH
Confidence 99987643221 112223579999999999999999999999999999999999999986542221 111111000
Q ss_pred ccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 722 ~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
. ...+..+.+. .......+.+++..|++.+|++||++.++++.|+
T Consensus 250 ~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 250 F----IKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred H----HHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0 0011111110 1122456788999999999999999999998763
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-25 Score=234.77 Aligned_cols=222 Identities=22% Similarity=0.299 Sum_probs=159.1
Q ss_pred eccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 533 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
||+|+||+||++... +++.||+|.+.... ....+.+.+|++++.+++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999865 48899999986432 22345678899999999999999999999999999999999999999
Q ss_pred hhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 609 DVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 609 ~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
.+++...... .+....... ...+|..+.++.+||+|||++....... ......|
T Consensus 81 ~~~l~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~ 156 (277)
T cd05577 81 KYHIYNVGEP-GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKGRAG 156 (277)
T ss_pred HHHHHHcCcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---ccccccC
Confidence 9988653321 122222221 2234445778899999999998664321 1223468
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
+..|+|||++.+..++.++|||||||++|||++|+.|+......... ...... .. . .....+......
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~----~~-~-----~~~~~~~~~~~~ 224 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK--EELKRR----TL-E-----MAVEYPDKFSPE 224 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH--HHHHhc----cc-c-----ccccCCccCCHH
Confidence 88999999999888999999999999999999999997543221100 000000 00 0 001112223456
Q ss_pred HHHHHHHccccCcCCCC-----CHHHHHH
Q 003402 747 YINVALLCVQENAEDRP-----TMSDVVS 770 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RP-----t~~evl~ 770 (823)
+.+++..||+.+|++|| ++.+++.
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 78899999999999999 5555654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.9e-26 Score=224.39 Aligned_cols=234 Identities=20% Similarity=0.238 Sum_probs=178.3
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC----h----hhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS----G----QGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE 592 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~----~----~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~ 592 (823)
..+.|...+.||.|..+.|-++..+ .+++.|+|++.... . .-.++-++|+.+|+++ -||+|+.+.+++..
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456777799999999999998765 48899999986321 1 1234567899999998 59999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecC
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
+...++|+|.|+.|.|.++|...-. .|..++.||+.+.+||+.|+++++||+|||+|..+.
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE 174 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC
Confidence 9999999999999999999854211 155677888999999999999999999999999886
Q ss_pred CCccccccccccccccccccccccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALE------GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~------~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 727 (823)
..+ .....+|||+|+|||.+.- .-|+..+|+|+.||+||.|+.|.+||--. ..+- +.++..+++.
T Consensus 175 ~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--kQml----MLR~ImeGky 245 (411)
T KOG0599|consen 175 PGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--KQML----MLRMIMEGKY 245 (411)
T ss_pred Cch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--HHHH----HHHHHHhccc
Confidence 543 2345799999999998852 24788999999999999999999997311 0000 1111111111
Q ss_pred ccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+. ..+.-.+......+++..|+|.||.+|-|++|+++.
T Consensus 246 -qF-----~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 246 -QF-----RSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -cc-----CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 11 111122345667889999999999999999998763
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-25 Score=240.34 Aligned_cols=240 Identities=20% Similarity=0.244 Sum_probs=162.7
Q ss_pred eeeccc--cceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEG--GFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G--~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+| +||+||+++.. +++.||||.+... .....+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 567777 89999999875 5899999998643 233457889999999999999999999999999999999999999
Q ss_pred CCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc-----c
Q 003402 606 KSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ-----G 659 (823)
Q Consensus 606 gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~-----~ 659 (823)
++|.+++...... |..+..|++....||+.+.++.+|++||+.+......... .
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 9999887642211 1122233344445566678889999999865432211100 0
Q ss_pred ccccccccccccccccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHh----------------h
Q 003402 660 NTKRIVGTYGYMSPEYALEG--VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS----------------L 721 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~--~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~----------------~ 721 (823)
......++..|||||++.+. .++.++|||||||++|||++|+.|+........ ....... .
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITTFPCEESR 242 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccccchhhhh
Confidence 11112456789999999764 478999999999999999999999854322110 0000000 0
Q ss_pred cc----------------CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 722 CK----------------NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 722 ~~----------------~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. ......+.+..+...........+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00 000001111111222233456778999999999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-27 Score=273.31 Aligned_cols=232 Identities=23% Similarity=0.311 Sum_probs=179.8
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++.-..+||.|.||.||-|... +|...|||.++-. .....+...+|+.++..|.|||+|+++|+-.+++..+|.|||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 4555689999999999999865 4888999987643 234456788999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCc--ccccc
Q 003402 603 MVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE--LQGNT 661 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~--~~~~~ 661 (823)
|.+|+|.+.+..... .|..+..||+.+..||..+.++.+|++|||.|+.+.... .....
T Consensus 1316 C~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el 1395 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGEL 1395 (1509)
T ss_pred hccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHH
Confidence 999999998854321 145667788888889999999999999999999876542 23344
Q ss_pred ccccccccccccccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 662 KRIVGTYGYMSPEYALEGV---FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~---~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
...+||+.|||||++.+.. ..-++||||+|||++||+||++|+.....+-. .++.... +.. ..
T Consensus 1396 ~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a----IMy~V~~-gh~---------Pq 1461 (1509)
T KOG4645|consen 1396 QSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA----IMYHVAA-GHK---------PQ 1461 (1509)
T ss_pred HhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH----HHhHHhc-cCC---------CC
Confidence 5679999999999998655 45689999999999999999999875544311 1111111 111 12
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++.....+-.+++..|++.||++|=++.|+++.
T Consensus 1462 ~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1462 IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 233355566789999999999999888777664
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=233.86 Aligned_cols=238 Identities=22% Similarity=0.277 Sum_probs=163.4
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh-hhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEEcc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
|.+.+.||+|+||+||+|+..+ ++.||||++..... .......+|+..+.+++ ||||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 5667899999999999999864 78999999875422 22234567999999999 999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
+|+|.+++.... ...+.+.....++ .+|..+.++.+||+|||+++....... .
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~---~ 155 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP---Y 155 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC---c
Confidence 889988876433 1223444333332 334447788999999999987643321 1
Q ss_pred ccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC---------Ccccccc
Q 003402 662 KRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN---------DRAHELM 731 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~---------~~~~~l~ 731 (823)
....|+..|+|||++.. ..++.++||||||+++|||++|+.|+....... ........... ......+
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID--QLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH--HHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 23568899999998754 457999999999999999999998874332210 00000000000 0000000
Q ss_pred Ccccc-------cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 732 DPVLQ-------NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 732 d~~l~-------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+..+. ..........+.+++..||+.+|++||++.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000 00001114568899999999999999999998764
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-25 Score=243.41 Aligned_cols=239 Identities=23% Similarity=0.308 Sum_probs=162.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------Ce
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------GE 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~~ 595 (823)
++|.+.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 67999999999999999999865 5899999998643 222345688999999999999999999998754 35
Q ss_pred EEEEEEcccCCCchhhccCCCc-----------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK-----------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~-----------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
.++|+||+.. +|..++...-. .|..+..|+.....+|+.+.++.+||+|||+++.....
T Consensus 95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~--- 170 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 170 (342)
T ss_pred EEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC---
Confidence 6999999964 66655421100 01122333333445566688899999999999865321
Q ss_pred cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC-----------c
Q 003402 659 GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND-----------R 726 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~-----------~ 726 (823)
.....||..|||||.+.+ ..++.++|||||||++|||++|+.|+..... .............. .
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 171 --MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred --CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHHHhcccc
Confidence 223568899999999876 4689999999999999999999999853221 11111111100000 0
Q ss_pred cccccC--cc-cccCC---CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 AHELMD--PV-LQNEV---SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~~~l~d--~~-l~~~~---~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....++ +. ..... .......+.+++..||+.||++||++.+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 00 00000 01123457889999999999999999999864
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.5e-25 Score=235.04 Aligned_cols=220 Identities=22% Similarity=0.281 Sum_probs=155.0
Q ss_pred eeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHH---HhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 532 KLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLI---AKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 532 ~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l---~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.||+|+||.||++... +++.+|||.+.+.. ....+.+.+|..++ ...+|||++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 48899999886532 12223345555443 34479999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHH----------------------HHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|+|..++..... +.+. |++....||+.++++.+||+|||++....... ..
T Consensus 81 ~~~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~~ 153 (279)
T cd05633 81 GGDLHYHLSQHGV---FSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PH 153 (279)
T ss_pred CCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----cc
Confidence 9999988754321 2222 22223345555788899999999997654321 12
Q ss_pred cccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...||+.|||||.+.. ..++.++|||||||++|||++|+.|+............ .... ......+.
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~---~~~~----------~~~~~~~~ 220 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID---RMTL----------TVNVELPD 220 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHH---HHhh----------cCCcCCcc
Confidence 3468999999998864 55899999999999999999999998543222111100 0000 00111222
Q ss_pred HHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
....++.+++..||+.||++|| ++++++++
T Consensus 221 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 221 SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 3445778899999999999999 59988775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-25 Score=235.82 Aligned_cols=238 Identities=22% Similarity=0.290 Sum_probs=166.3
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
|+..+.||+|++|.||++... +++.+|+|++..... ...+.+.+|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456689999999999999875 588999999875432 24567889999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++ +|.+++.... ..+.+.....+ ..+|..+.++.+||+|||.+....... ...
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~~ 155 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RPY 155 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--ccc
Confidence 75 7877775432 12233222222 233444778899999999998875543 112
Q ss_pred ccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC---CccccccC-----
Q 003402 662 KRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN---DRAHELMD----- 732 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~---~~~~~l~d----- 732 (823)
....++..|+|||.+.+. .++.++||||||+++|||++|+.|+..... ............. .....+.+
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE--IDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 234688899999998876 789999999999999999999988743321 1111111110000 00000000
Q ss_pred ------cc--cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 ------PV--LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ------~~--l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. ............+.+++..||+.||.+||++.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 0001112345678899999999999999999999863
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=239.18 Aligned_cols=243 Identities=21% Similarity=0.267 Sum_probs=167.5
Q ss_pred HHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCeE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE-QGEK 596 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-~~~~ 596 (823)
...+++|++.+.||+|+||.||++... +++.||||++... .....+.+.+|+.++.+++||||+++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 345688999999999999999999865 5889999988642 22345678899999999999999999999876 5678
Q ss_pred EEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
++|+||+ +++|..++...... |...+.|+...+.+|+.+.++.+||+|||+++.....
T Consensus 86 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--- 161 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ--- 161 (328)
T ss_pred EEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC---
Confidence 9999998 46888777532211 1122223333344555678889999999999854321
Q ss_pred cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh-----------ccCCc
Q 003402 659 GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL-----------CKNDR 726 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~-----------~~~~~ 726 (823)
.....++..|+|||.+.+ ..++.++|||||||++|||++|+.|+...... ......... ...+.
T Consensus 162 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd07856 162 --MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFSIITDLLGTPPDDVINTICSEN 237 (328)
T ss_pred --cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhccchh
Confidence 223567889999998766 56899999999999999999999987543211 000000000 00000
Q ss_pred cccccCcc-cccCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 AHELMDPV-LQNEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~~~l~d~~-l~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+++... .....+ ......+.+++..|++.+|++||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 238 TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 01111000 000111 1124578899999999999999999998775
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=238.27 Aligned_cols=243 Identities=20% Similarity=0.249 Sum_probs=165.2
Q ss_pred Ccc-eeeeeccccceeEEeeeec-CCcEEEEEEeccCChhh--------------HHHHHHHHHHHHhcCCCceeeEEeE
Q 003402 526 NFS-IQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQG--------------LKEFKNEMMLIAKLQHRNLVRLLGC 589 (823)
Q Consensus 526 ~f~-~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~--------------~~~f~~Ev~~l~~l~H~Niv~l~g~ 589 (823)
+|. +.+.||+|+||+||+|... +++.||||.++...... ...+.+|++++.+++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 444 3477999999999999865 58899999986432211 1257899999999999999999999
Q ss_pred EEeCCeEEEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeecee
Q 003402 590 CIEQGEKILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 590 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~ 650 (823)
+...+..++||||+. |+|.+++...... |..++.|+.....+|+.+.++.+||+|||+++
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~ 167 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLAR 167 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcccee
Confidence 999999999999997 6888877542210 12233344444556666888899999999998
Q ss_pred ecCCCcc------------ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHH
Q 003402 651 MFGGDEL------------QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGH 717 (823)
Q Consensus 651 ~~~~~~~------------~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~ 717 (823)
....... ........+++.|+|||++.+. .++.++|||||||++|||++|+.|+..... ......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~~ 245 (335)
T PTZ00024 168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE--IDQLGR 245 (335)
T ss_pred ecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH
Confidence 7652110 1111223578899999998764 479999999999999999999998754322 111221
Q ss_pred HHhhccCCcc---ccc--------cCcccc---cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 718 AWSLCKNDRA---HEL--------MDPVLQ---NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 718 ~~~~~~~~~~---~~l--------~d~~l~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......... ... ...... ..........+.+++..||+.+|++||++.|++..
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 246 IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 1111111000 000 000000 00011224567889999999999999999999985
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=237.89 Aligned_cols=222 Identities=25% Similarity=0.381 Sum_probs=159.1
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
|...++||+|+||+||+|+.. +++.||+|.+... .....+.+.+|+.++.+++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556688999999999999875 4789999998643 223346788999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+. |+|.+++.... ..+.+.....+ ..+|+.+.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~------ 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP------ 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC------
Confidence 96 56666664321 12333333222 2334446778899999999864321
Q ss_pred ccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 661 TKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.....|+..|+|||++. ...++.++|||||||++|||++|+.|+..... ........... .....
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~-~~~~~------ 241 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQND-SPTLQ------ 241 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhcC-CCCCC------
Confidence 22357899999999984 46689999999999999999999998743211 11111111111 11110
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++..||+.+|++||++.+++..
T Consensus 242 --~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 --SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11122457789999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=243.60 Aligned_cols=244 Identities=18% Similarity=0.239 Sum_probs=166.2
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~----~~~~~ 597 (823)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.+++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 67889999999999999999875 48999999987532 2345678899999999999999999998763 45789
Q ss_pred EEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+|+||+. ++|..++...... |..+..|+...+.+|..+.++.+||+|||+++........
T Consensus 85 lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 9999996 6888887543221 1111122222234455578899999999999876433211
Q ss_pred --cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc-----------cC
Q 003402 659 --GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC-----------KN 724 (823)
Q Consensus 659 --~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~-----------~~ 724 (823)
.......|+..|+|||.+.. ..++.++|||||||++|||++|+.|+...... ..+....... ..
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHHhCCChhHhhhhhch
Confidence 11224578999999998865 46899999999999999999999998433211 0000000000 00
Q ss_pred CccccccCcc-cccCC-----CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 DRAHELMDPV-LQNEV-----SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ~~~~~l~d~~-l~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+...+..+.. ..... .......+.+++..||+.+|++||++.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000111000 00001 11235678899999999999999999999885
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=232.58 Aligned_cols=237 Identities=22% Similarity=0.304 Sum_probs=162.1
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCceeeEEeEEEeCCe-----
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKL---QHRNLVRLLGCCIEQGE----- 595 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l---~H~Niv~l~g~~~~~~~----- 595 (823)
|++.++||+|+||.||+|+... ++.||+|++.... ......+.+|+.++.++ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5677999999999999999865 8999999997432 22234677888877666 59999999999998776
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
.+++|||+++ +|.+++..... ..+.+.....++ .+|..+.++.+||+|||+++.+.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 9999999974 78877754221 123443333332 23344778899999999998764
Q ss_pred CCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc------
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA------ 727 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~------ 727 (823)
.... .....++..|+|||++.+..++.++|||||||++|||++|++|+...... ...............
T Consensus 159 ~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 159 FEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA--DQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred CCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH--HHHHHHHHHcCCCChHhcCCC
Confidence 3321 12345789999999999999999999999999999999998887543221 111111110000000
Q ss_pred ----ccccCcccc---cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 728 ----HELMDPVLQ---NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 728 ----~~l~d~~l~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
......... ..........+.+++..||+.||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000 0111223466788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=236.57 Aligned_cols=243 Identities=24% Similarity=0.316 Sum_probs=161.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG------ 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~------ 594 (823)
.++|++.++||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999875 478999999864322 22346789999999999999999999886543
Q ss_pred --eEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeec
Q 003402 595 --EKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 595 --~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
..++|+||+.. +|...+...... |..+..|+...+.+|..++++.+||+|||+++..
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 46999999975 565555432211 1112222222334455578899999999999865
Q ss_pred CCCccc---------cccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc
Q 003402 653 GGDELQ---------GNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC 722 (823)
Q Consensus 653 ~~~~~~---------~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~ 722 (823)
...... .......|++.|+|||.+.+. .++.++|||||||++|||++|++|+...... ......+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~--~~~~~~~~~~ 243 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI--DQLHLIFKLC 243 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHh
Confidence 432211 111235678899999988654 5899999999999999999999887532221 1111111111
Q ss_pred cCC---------ccccccC--------cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 723 KND---------RAHELMD--------PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 723 ~~~---------~~~~l~d--------~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
... ......+ +.+.. ........+.+++..|++.||++|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE-RFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHH-HcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 100 0000000 00000 00112256788999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-24 Score=227.15 Aligned_cols=225 Identities=19% Similarity=0.224 Sum_probs=157.5
Q ss_pred HHHHhcCcceeeee--ccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHh-cCCCceeeEEeEEEeCCe
Q 003402 520 VTAATENFSIQSKL--GEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAK-LQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 520 ~~~~~~~f~~~~~L--G~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~-l~H~Niv~l~g~~~~~~~ 595 (823)
.....++|++.+.+ |+|+||.||+++.. +++.+|+|.+........ |+..... .+||||+++++.+...+.
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~ 83 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKG 83 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCe
Confidence 33444667776666 99999999999865 478899999865321111 2222222 279999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCC-Cceeceeeceeec
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHM-NPKISDFGMARMF 652 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~-~~KI~DFGla~~~ 652 (823)
.++||||+++++|.+++.... .+.+.....++ .+|+.+.++ .+||+|||+++..
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 999999999999999986532 23333333322 233335566 8999999999876
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
.... ...|+..|+|||++.+..++.++|||||||++|||++|+.|+.....+........... ....
T Consensus 161 ~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~---- 227 (267)
T PHA03390 161 GTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---QKKL---- 227 (267)
T ss_pred CCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh---cccC----
Confidence 4322 24689999999999999999999999999999999999999864332222221111111 0000
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCC-HHHHHH
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPT-MSDVVS 770 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~ 770 (823)
.........+.+++..||+.+|.+||+ ++++++
T Consensus 228 -----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 228 -----PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 111134456788999999999999996 688875
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.5e-25 Score=238.09 Aligned_cols=241 Identities=19% Similarity=0.198 Sum_probs=162.1
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
+.+.+|.|+++.||+++. +++.||||+++.. .....+.+.+|+.++++++||||+++++++.+.+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 345556666666676665 6899999998754 3455678999999999999999999999999999999999999999
Q ss_pred CchhhccCCCccc---------------------ccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc-----ccc
Q 003402 607 SLDVFLFDPTKKH---------------------LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL-----QGN 660 (823)
Q Consensus 607 sL~~~l~~~~~~~---------------------~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~-----~~~ 660 (823)
+|..++....... ..+..|+.....+|+.+.++.+||+|||.+..+..... ...
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccc
Confidence 9999886432111 11112222223344457788999999999876532211 111
Q ss_pred cccccccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh----cc-------CCcc
Q 003402 661 TKRIVGTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL----CK-------NDRA 727 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~----~~-------~~~~ 727 (823)
.....++..|+|||++.. ..++.++|||||||++|||++|+.|+....... .+....... .. ....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKVRGTVPCLLDKSTYPLYEDSM 243 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCccccccCchhhhcCCc
Confidence 233567889999999876 358899999999999999999999986432211 111110000 00 0000
Q ss_pred cc----ccCccc----ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HE----LMDPVL----QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~----l~d~~l----~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. ..++.. ...........+.+++..||+.||++|||+.+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00 001110 011122334678889999999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=197.27 Aligned_cols=113 Identities=49% Similarity=0.782 Sum_probs=98.6
Q ss_pred CCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCCCeEEEe
Q 003402 48 TLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSS 127 (823)
Q Consensus 48 ~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst 127 (823)
+.|+.+++|+|+++.|++|||.+.. +..+.+|||+..++++||+|||+.|+.+. +.|.|+.||+|+|.|.+|.++|+|
T Consensus 2 ~~l~~~~~l~s~~~~f~~G~~~~~~-q~dgnlV~~~~~~~~~vW~snt~~~~~~~-~~l~l~~dGnLvl~~~~g~~vW~S 79 (114)
T smart00108 2 NTLSSGQTLVSGNSLFELGFFTLIM-QNDYNLILYKSSSRTVVWVANRDNPVSDS-CTLTLQSDGNLVLYDGDGRVVWSS 79 (114)
T ss_pred cccCCCCEEecCCCcEeeeccccCC-CCCEEEEEEECCCCcEEEECCCCCCCCCC-EEEEEeCCCCEEEEeCCCCEEEEe
Confidence 4678899999999999999999864 46899999987656899999999997654 899999999999999999999999
Q ss_pred cccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCC
Q 003402 128 NVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDY 167 (823)
Q Consensus 128 ~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~ 167 (823)
++.......+|+|+|+|||||++.. +.+|||||||
T Consensus 80 ~t~~~~~~~~~~L~ddGnlvl~~~~-----~~~~W~Sf~~ 114 (114)
T smart00108 80 NTTGANGNYVLVLLDDGNLVIYDSD-----GNFLWQSFDY 114 (114)
T ss_pred cccCCCCceEEEEeCCCCEEEECCC-----CCEEeCCCCC
Confidence 9863345668999999999999873 5799999997
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=232.01 Aligned_cols=227 Identities=21% Similarity=0.301 Sum_probs=169.7
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV 599 (823)
++|.+.+.||+|+||.||+++.. +++.||+|.+... .....+.+.+|+.++.+++ ||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999875 5899999998653 2233467899999999998 99999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++++|.+++.... .+.+.....++ .+|..+.++.+||+|||++........
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 99999999999886432 23333333322 233346778899999999987654321
Q ss_pred c------------------cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH
Q 003402 658 Q------------------GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719 (823)
Q Consensus 658 ~------------------~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~ 719 (823)
. .......|+..|+|||++....++.++||||||++++|+++|+.|+..... .... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~---~ 232 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--YLTF---Q 232 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--HHHH---H
Confidence 1 222345688999999999988899999999999999999999999753321 0000 0
Q ss_pred hhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCH----HHHHH
Q 003402 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTM----SDVVS 770 (823)
Q Consensus 720 ~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~----~evl~ 770 (823)
.... .....+......+.+++..||+.+|++||++ .++++
T Consensus 233 ~~~~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 233 KILK-----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHh-----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 1000 0111222235568899999999999999999 77665
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=230.11 Aligned_cols=229 Identities=22% Similarity=0.299 Sum_probs=161.9
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ-----SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
+|.+.++||+|+||.||+++... +..+++|.++.. ......++..|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 37788999999999999998754 444556655431 122345677899999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCC-cccccCHHHHHHHHhcccc---------------------ccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPT-KKHLLGWQLRVRIIDGIAQ---------------------DQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~-~~~~l~~~~r~~i~~~ia~---------------------d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+||+++++|..++.... ....+.+.....++.+++. -.+..+||+|||+++.+.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~ 160 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCD 160 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcc
Confidence 99999999998875321 1223444443333322221 1234689999999987644322
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......|++.|+|||......++.++||||||+++|||++|+.|+.... ......... .+. .+
T Consensus 161 --~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~~-~~~-----~~---- 223 (260)
T cd08222 161 --LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRIV-EGP-----TP---- 223 (260)
T ss_pred --cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHH-cCC-----CC----
Confidence 1223568899999999988889999999999999999999999874221 111111111 010 11
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 224 SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1223345577889999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=239.68 Aligned_cols=245 Identities=20% Similarity=0.188 Sum_probs=162.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC----------
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ---------- 593 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~---------- 593 (823)
.+|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57889999999999999999875 4889999998766556667899999999999999999999776543
Q ss_pred ----CeEEEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccc-cCCCceeceeecee
Q 003402 594 ----GEKILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQD-QHMNPKISDFGMAR 650 (823)
Q Consensus 594 ----~~~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d-~~~~~KI~DFGla~ 650 (823)
...++|+||++ ++|..++...... |..+..|+...+.+|..+ ++..+||+|||+++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~ 163 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLAR 163 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccce
Confidence 35789999997 5887777432211 111122222223334444 45678999999998
Q ss_pred ecCCCccc-cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc--CCc
Q 003402 651 MFGGDELQ-GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK--NDR 726 (823)
Q Consensus 651 ~~~~~~~~-~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~--~~~ 726 (823)
.+...... .......|+..|+|||.+.. ..++.++|||||||++|||++|+.|+....... ........... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 242 (342)
T cd07854 164 IVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQLILESVPVVREED 242 (342)
T ss_pred ecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChHH
Confidence 76432111 11123467889999998754 568899999999999999999999985332110 00000000000 000
Q ss_pred cccc-------cC-cccccC-----CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 AHEL-------MD-PVLQNE-----VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~~~l-------~d-~~l~~~-----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+. .. ...... ........+.+++..||+.||++|||+.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 243 RNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 00 000000 011223567889999999999999999999874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-25 Score=235.67 Aligned_cols=225 Identities=24% Similarity=0.308 Sum_probs=175.4
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.+.|..-++||+||||.||-+.... |+.+|.|+|.+.. .++...-++|-+++.+++.+-||.+--.+...+.++||
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 3568888999999999999997654 8999999987542 34455678899999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 600 YEYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+..|.+|+|.-+|...... |......|+.++.||+.|++++++|+|.|||..+...+..
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~ 343 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI 343 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcc
Confidence 9999999999998654321 2233345666788999999999999999999988655432
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc-c--
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV-L-- 735 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~-l-- 735 (823)
...+||.||||||++.++.|+...|-||+||+||||+.|+.||..+.... ..+-+|.. +
T Consensus 344 ---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv---------------k~eEvdrr~~~~ 405 (591)
T KOG0986|consen 344 ---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV---------------KREEVDRRTLED 405 (591)
T ss_pred ---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh---------------hHHHHHHHHhcc
Confidence 22489999999999999999999999999999999999999985433221 11111111 1
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMS 766 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~ 766 (823)
..+++....++...+....|+.||++|.-.+
T Consensus 406 ~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 406 PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 1234445566777788888999999986554
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-24 Score=228.89 Aligned_cols=220 Identities=23% Similarity=0.281 Sum_probs=155.2
Q ss_pred eeccccceeEEeeeec-CCcEEEEEEeccCCh---hhHHHHHHHHH---HHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 532 KLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLKEFKNEMM---LIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 532 ~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~---~~~~~f~~Ev~---~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.||+|+||.||+++.. +++.||+|.+..... .....+..|.. ++...+||||+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999875 478999999865321 22233445544 4445679999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|+|..++.... .+.+..+..+ +.+|..+.++.+||+|||+++.+.... ..
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~~ 153 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PH 153 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----Cc
Confidence 999998885422 2333333332 334445778899999999998653321 22
Q ss_pred cccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...|+..|||||.+.++ .++.++|||||||++|||++|+.|+............ ..... .+. ..+.
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~------~~~----~~~~ 220 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID---RMTLT------MAV----ELPD 220 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH---HHhhc------cCC----CCCC
Confidence 35799999999998754 6899999999999999999999998543221110000 00000 011 1122
Q ss_pred HHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
.....+.+++..|++.+|.+|| ++.++++.
T Consensus 221 ~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 221 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 2345788899999999999999 99998763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=238.74 Aligned_cols=240 Identities=21% Similarity=0.268 Sum_probs=168.3
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-----eEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG-----EKI 597 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~-----~~~ 597 (823)
+|.+.++||+|+||.||+|+... ++.||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 47788999999999999998764 8899999987643 344578999999999999999999999998875 889
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||++ ++|..++.... .+.+.... ....+|..+.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9999998 47888775432 22232222 2223444477889999999999976543
Q ss_pred cc-ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc-----------
Q 003402 656 EL-QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC----------- 722 (823)
Q Consensus 656 ~~-~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~----------- 722 (823)
.. ........+|..|+|||.+.+. .++.++||||||+++|||++|+.|+...... ..........
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHhhhc
Confidence 21 0122335688999999999887 7899999999999999999999997543321 1011000000
Q ss_pred cCCccccccCccc-cc-----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 723 KNDRAHELMDPVL-QN-----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 723 ~~~~~~~l~d~~l-~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+.... .. .........+.+++..||+.+|++||++.+++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000011110000 00 0011134567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-26 Score=226.34 Aligned_cols=234 Identities=22% Similarity=0.314 Sum_probs=171.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHh-cCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAK-LQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~-l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++++....||.|+||+|+|-.++ .|+..|||+++.... ...++++.|..+..+ -+.||||+++|.+...+..|+-||
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 34555688999999999999775 489999999985433 456789999986555 478999999999999999999999
Q ss_pred cccCCCchhhcc---C---CC-------------------cccccCHHHHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLF---D---PT-------------------KKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~---~---~~-------------------~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
.|.- ||+.+-. . .. .+..+...||+.++.||+.|.++.+||||||++-.+-..-
T Consensus 144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si 222 (361)
T KOG1006|consen 144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI 222 (361)
T ss_pred HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence 9953 5554421 0 00 0133667888999999999999999999999997663321
Q ss_pred cccccccccccccccccccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEG--VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~--~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
..+.-+|-..|||||-+... -|+.+|||||+||+|+|+.||+.|+..-. +...+.......+ ...+..
T Consensus 223 ---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~----svfeql~~Vv~gd-pp~l~~-- 292 (361)
T KOG1006|consen 223 ---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD----SVFEQLCQVVIGD-PPILLF-- 292 (361)
T ss_pred ---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH----HHHHHHHHHHcCC-CCeecC--
Confidence 22335789999999988643 38999999999999999999999974321 2223222222222 112211
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..-..+....+.+++-.|+.+|-.+||...++.++
T Consensus 293 --~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 293 --DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred --cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11123345678889999999999999999998764
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-25 Score=258.50 Aligned_cols=233 Identities=25% Similarity=0.336 Sum_probs=160.7
Q ss_pred HHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-----
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG----- 594 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~----- 594 (823)
.-..+|+..+.||+||||.|||++-+ ||+.+|||++... +........+|++++++|+|||+|+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34467888899999999999999854 7999999999754 2334457889999999999999999987664211
Q ss_pred --------------------------------------------------------------------------------
Q 003402 595 -------------------------------------------------------------------------------- 594 (823)
Q Consensus 595 -------------------------------------------------------------------------------- 594 (823)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ----------------------------------eEEEEEEcccCCCchhhccCCCcc--------------------cc
Q 003402 595 ----------------------------------EKILIYEYMVNKSLDVFLFDPTKK--------------------HL 620 (823)
Q Consensus 595 ----------------------------------~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~ 620 (823)
.+||-||||+.-.|++++.+.... |.
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 135566777776666666543321 22
Q ss_pred cCHHHHHHHHhccccccCCCceeceeeceeecC----------C--C----ccccccccccccccccccccccCC---CC
Q 003402 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFG----------G--D----ELQGNTKRIVGTYGYMSPEYALEG---VF 681 (823)
Q Consensus 621 l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~----------~--~----~~~~~~~~~~Gt~~YmAPE~~~~~---~~ 681 (823)
.+..||+.++.||..|++..+||.|||+|+.+. . + ......+..+||.-|+|||.+.+. +|
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 233344445555666899999999999998721 0 0 011134567999999999998765 49
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc--cCCCHHHHHHHHHHHHHccccCc
Q 003402 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ--NEVSLPMLVRYINVALLCVQENA 759 (823)
Q Consensus 682 s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~--~~~~~~~~~~~~~l~~~Cl~~dP 759 (823)
+.|+|+||+||||+||+. ||+...+ .+.. +..+-++.+. ..+..+....-.+++.|++++||
T Consensus 796 n~KiDmYSLGIVlFEM~y---PF~TsME-------Ra~i------L~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEMLY---PFGTSME-------RASI------LTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDP 859 (1351)
T ss_pred cchhhhHHHHHHHHHHhc---cCCchHH-------HHHH------HHhcccCCCCCCcccccccchHHHHHHHHHhcCCC
Confidence 999999999999999984 3321110 0111 1111111111 12233445556789999999999
Q ss_pred CCCCCHHHHHH
Q 003402 760 EDRPTMSDVVS 770 (823)
Q Consensus 760 ~~RPt~~evl~ 770 (823)
.+|||+.|++.
T Consensus 860 ~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 860 SKRPTATELLN 870 (1351)
T ss_pred ccCCCHHHHhh
Confidence 99999999987
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-24 Score=240.18 Aligned_cols=172 Identities=23% Similarity=0.334 Sum_probs=137.8
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CC-----ceeeEEeEEEeCCeEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HR-----NLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~-----Niv~l~g~~~~~~~~~l 598 (823)
+|++.+.||+|.||.|-||... .++.||||++++. .....+-..|+.+|..|+ |. |+|++++++...++.+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 6889999999999999999865 4899999999875 344566678999999997 43 89999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccc--cCCCceeceeeceeecCCC
Q 003402 599 IYEYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQD--QHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d--~~~~~KI~DFGla~~~~~~ 655 (823)
|+|.+. -+|.++|...... +.+.+.|.+.+++||+.- ..-.+||+|||.|......
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~ 344 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR 344 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence 999984 4899998654432 223344444455666542 2347999999999875433
Q ss_pred ccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT 704 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~ 704 (823)
.+ +...+.-|.|||++.+.+|+.+.||||||||+.||++|.+-|
T Consensus 345 vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLf 388 (586)
T KOG0667|consen 345 VY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLF 388 (586)
T ss_pred ce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcccc
Confidence 22 467889999999999999999999999999999999996654
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-24 Score=236.86 Aligned_cols=239 Identities=21% Similarity=0.248 Sum_probs=162.9
Q ss_pred HHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC----
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG---- 594 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~---- 594 (823)
...++|++.+.||+|+||.||++... +++.||||++... .....+.+.+|+.++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 34578999999999999999999864 5889999998643 2233457889999999999999999999987653
Q ss_pred --eEEEEEEcccCCCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeecee
Q 003402 595 --EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 595 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~ 650 (823)
..++||||+ +++|..++.... +.+.... ..+.+|+.+.++.+||+|||+++
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~~----l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~ 166 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHEK----LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 166 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccc
Confidence 468999999 678887775321 2222222 22234444678899999999998
Q ss_pred ecCCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH----------
Q 003402 651 MFGGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW---------- 719 (823)
Q Consensus 651 ~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~---------- 719 (823)
..... .....+++.|+|||.+.+ ..++.++|||||||++||+++|+.|+...... ..+.....
T Consensus 167 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 167 QTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred ccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 65332 223567899999999876 45899999999999999999999997533211 00000000
Q ss_pred hhccCCccccccCc--ccc----cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 720 SLCKNDRAHELMDP--VLQ----NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 720 ~~~~~~~~~~l~d~--~l~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.............. ... ..........+.+++..|++.||++|||+.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000000 000 00011223457889999999999999999999853
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=237.31 Aligned_cols=248 Identities=20% Similarity=0.218 Sum_probs=166.1
Q ss_pred HHHHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 003402 517 FASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ 593 (823)
Q Consensus 517 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~ 593 (823)
..++...+++|.+.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++.+++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 3456667789999999999999999999864 5889999998753 223346788999999999999999999988643
Q ss_pred ------CeEEEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeece
Q 003402 594 ------GEKILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMA 649 (823)
Q Consensus 594 ------~~~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla 649 (823)
...++++|++ +++|..++...... |..+..|+...+.||..+.++.+||+|||++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~ 167 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 167 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccc
Confidence 3467888876 77888776432111 1111122222234455578889999999999
Q ss_pred eecCCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc-CCc-
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK-NDR- 726 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~-~~~- 726 (823)
+..... .....||..|+|||.+.+ ..++.++|||||||++|||++|+.|+...... ..+......... ...
T Consensus 168 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 241 (345)
T cd07877 168 RHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAEL 241 (345)
T ss_pred cccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHH
Confidence 865321 223578999999998866 56899999999999999999999987432211 111000000000 000
Q ss_pred ccccc-----------Cccccc---CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 AHELM-----------DPVLQN---EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~~~l~-----------d~~l~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+. +..... .........+.+++..|++.||.+||++.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 242 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00000 000000 0000124467899999999999999999998875
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-24 Score=227.24 Aligned_cols=238 Identities=24% Similarity=0.287 Sum_probs=165.1
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
|+..++||+|+||.||+|+... ++.||+|.+.... ....+.+.+|+.++++++|+|++++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 4566899999999999998765 8999999997643 333467889999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
+ ++|.+++.... ..+.+..+..++ .+|..++++.+||+|||+++....... ..
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~ 155 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--TY 155 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--cc
Confidence 8 58988886532 122333322222 233346788999999999987643321 12
Q ss_pred ccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc-----------cCCc-cc
Q 003402 662 KRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC-----------KNDR-AH 728 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~-----------~~~~-~~ 728 (823)
....++..|+|||.+... .++.++|||||||++|||++|+.|+...... .......... .... ..
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--DQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 234567889999998776 7899999999999999999998887432211 1111111000 0000 00
Q ss_pred cccCcccc---cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 ELMDPVLQ---NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 ~l~d~~l~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........ ..........+.+++..||+.||++||++.+|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000 00011124568999999999999999999998863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-25 Score=220.55 Aligned_cols=231 Identities=21% Similarity=0.340 Sum_probs=171.9
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++++.+..||.|..|.|++.+... |..+|||.+.+. ..+..++++..+.++.+-+ .|.||+.+|||..+...++.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 455666889999999999998865 889999999765 3455678888888887776 8999999999999999999999
Q ss_pred cccCCCchhhccC---CC------------------cccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 602 YMVNKSLDVFLFD---PT------------------KKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 602 y~~~gsL~~~l~~---~~------------------~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
.|.- -++.+|.. +- .+..++..||+.+..||+.|+.+++|+||||++-.+-....
T Consensus 172 lMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA--- 247 (391)
T KOG0983|consen 172 LMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--- 247 (391)
T ss_pred HHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc---
Confidence 8843 12222211 10 01335667888889999999999999999999976643322
Q ss_pred ccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 661 TKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.++..|-+.|||||-+. ...|+.++|||||||.|+||.||+.|+.....+..-+ ..+. .+. .|.+..
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~l-tkvl---n~e------PP~L~~ 317 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVL-TKVL---NEE------PPLLPG 317 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHH-HHHH---hcC------CCCCCc
Confidence 23467999999999885 3468999999999999999999999986554442222 1111 111 122221
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ......+.++...|++.|+.+||...++++.
T Consensus 318 ~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 318 H--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred c--cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 1 1145678889999999999999999998874
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-25 Score=245.23 Aligned_cols=181 Identities=28% Similarity=0.411 Sum_probs=144.5
Q ss_pred cceeeeeccccceeEEeeee-cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------CeEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------GEKIL 598 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~~~~l 598 (823)
+...+.||+|+||.||+|+. ..|+.||||.++... ....+...+|+++|++++|+|||++++.-.+. ....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 44558999999999999995 459999999997643 33456788999999999999999999986654 46789
Q ss_pred EEEcccCCCchhhccCCCcccc----------------------cCHHHHHHHHhcccc----ccCCCceeceeeceeec
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHL----------------------LGWQLRVRIIDGIAQ----DQHMNPKISDFGMARMF 652 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~----------------------l~~~~r~~i~~~ia~----d~~~~~KI~DFGla~~~ 652 (823)
|||||.+|||...|.++....- ..+.||+.+..||.. |....-||+|||.||.+
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 9999999999999987654322 233445555555544 33334699999999988
Q ss_pred CCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD 710 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~ 710 (823)
..+. ....++||..|++||.+.. ..|+..+|.|||||++||.+||..||......
T Consensus 175 ~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 175 DDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred CCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 7654 4556899999999999984 78999999999999999999999998655443
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.4e-24 Score=233.75 Aligned_cols=243 Identities=20% Similarity=0.236 Sum_probs=162.7
Q ss_pred CcceeeeeccccceeEEeeeecC---CcEEEEEEeccC--ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC----Ce
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ----GE 595 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~---~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~----~~ 595 (823)
+|++.+.||+|+||.||+++... ++.||||++... .....+.+.+|+.++.++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 47788999999999999998753 678999998643 222356788999999999 599999999986543 45
Q ss_pred EEEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
.++++||+. ++|..++...... |..++.|+...+.+|+.+.++.+||+|||+++.+....
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 788899986 5888777432210 22233344444556666788899999999998764332
Q ss_pred cc--cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc-----------
Q 003402 657 LQ--GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC----------- 722 (823)
Q Consensus 657 ~~--~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~----------- 722 (823)
.. .......||..|+|||++.+ ..++.++|||||||++|||++|+.|+...... ..........
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV--DQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH--HHHHHHHHHhCCCCHHHHHhh
Confidence 11 12234679999999998765 46899999999999999999999887533211 1111100000
Q ss_pred cCCccccccC------cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 723 KNDRAHELMD------PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 723 ~~~~~~~l~d------~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......... ..............+.+++.+|++.||++|||+.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 000000011124568889999999999999999998763
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-25 Score=230.56 Aligned_cols=221 Identities=23% Similarity=0.280 Sum_probs=167.7
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG---QGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~l 598 (823)
..+|..+.+||+|+||+|.++.-+. .+.+|||+|++... ...+--+.|-++|+-. +-|-+++|..++..-+.+|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 3568888999999999999997654 57899999986521 2234456677788776 46889999999999999999
Q ss_pred EEEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||||+.+|+|-.++....+ .|..++..|+.+..||..|.++++||+|||++|.---+ ..
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~--~~ 505 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD--GV 505 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC--Cc
Confidence 9999999999877754221 13334455666677888899999999999999853222 23
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc--c
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ--N 737 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~--~ 737 (823)
.+.+++||+.|||||.+..++|+..+|-|||||+||||+.|++||+...++ +++..+.+ -
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~------------------elF~aI~ehnv 567 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED------------------ELFQAIMEHNV 567 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH------------------HHHHHHHHccC
Confidence 456799999999999999999999999999999999999999998644322 11111111 1
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCC
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPT 764 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt 764 (823)
.++...+.+...+...-+-..|.+|..
T Consensus 568 syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 568 SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred cCcccccHHHHHHHHHHhhcCCccccC
Confidence 345555667777777788889998854
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.9e-24 Score=252.60 Aligned_cols=126 Identities=24% Similarity=0.301 Sum_probs=101.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.++||+|+||+||+|... +++.||||+++... ....+.+.+|+.++..++||||+++++++......+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 67899999999999999999876 48899999987532 233467899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeecee
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~ 650 (823)
||+++++|..++...... |...+.|++..+.||+.+.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999988542210 11223334444556666888999999999986
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-24 Score=234.63 Aligned_cols=240 Identities=23% Similarity=0.298 Sum_probs=163.7
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe-----
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE----- 595 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~----- 595 (823)
.++|++.+.||+|+||.||+|+... ++.||||++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 4678999999999999999998864 789999998643 22344678889999999999999999998876654
Q ss_pred -EEEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 596 -KILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 596 -~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
.++|+||+ +++|.+++...... |..++.|+.....+|..+.++.+||+|||++......
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~- 171 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE- 171 (343)
T ss_pred cEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc-
Confidence 89999999 56888887542211 1111222222233444577889999999999875432
Q ss_pred cccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc-----------C
Q 003402 657 LQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK-----------N 724 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~-----------~ 724 (823)
.....++..|+|||.+.+ ..++.++|||||||++||+++|+.|+..... ...+........ .
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 245 (343)
T cd07851 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--IDQLKRIMNLVGTPDEELLQKISS 245 (343)
T ss_pred ----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCHHHHhhccc
Confidence 233568899999998865 3678999999999999999999998753221 111111000000 0
Q ss_pred CccccccCcccc---c---CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 DRAHELMDPVLQ---N---EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ~~~~~l~d~~l~---~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+..... . .........+.+++..|++.+|++|||+.+|++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000000 0 0001125678899999999999999999998764
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-24 Score=221.74 Aligned_cols=214 Identities=21% Similarity=0.283 Sum_probs=159.0
Q ss_pred eccccceeEEeeeecC-CcEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG---QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
||+|+||.||++...+ ++.+|+|.+..... ...+.+.+|+.++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 7999999999998764 88999999875422 2456899999999999999999999999999999999999999999
Q ss_pred hhhccCCCcccccCHHHHHH----HH------------------hccccccCCCceeceeeceeecCCCccccccccccc
Q 003402 609 DVFLFDPTKKHLLGWQLRVR----II------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG 666 (823)
Q Consensus 609 ~~~l~~~~~~~~l~~~~r~~----i~------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~G 666 (823)
.+++..... +.+..... ++ .+|..+.++.+||+|||++....... .......|
T Consensus 81 ~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~ 155 (250)
T cd05123 81 FSHLSKEGR---FSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFCG 155 (250)
T ss_pred HHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCcC
Confidence 999864321 22222222 22 23333677889999999998764432 12234578
Q ss_pred cccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 667 t~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
+..|+|||...+...+.++|+||||+++||+++|+.|+..... ..... .. ... ....+......
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~---~~-~~~----------~~~~~~~~~~~ 219 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYE---KI-LKD----------PLRFPEFLSPE 219 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHH---HH-hcC----------CCCCCCCCCHH
Confidence 9999999999988899999999999999999999999853321 11111 11 000 01112222456
Q ss_pred HHHHHHHccccCcCCCCCHHH
Q 003402 747 YINVALLCVQENAEDRPTMSD 767 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~e 767 (823)
+.+++..||+.||++||++.+
T Consensus 220 l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 220 ARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHhcCCHhhCCCccc
Confidence 788999999999999999954
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-23 Score=237.27 Aligned_cols=238 Identities=20% Similarity=0.330 Sum_probs=175.8
Q ss_pred HHHHHHHhcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe--
Q 003402 517 FASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE-- 592 (823)
Q Consensus 517 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~-- 592 (823)
+..+...++-|++.++||+|.+|.||+++. ++++.+|||++.-. ....++...|..+++.. +|||++.++|++..
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 344445667899999999999999999975 45888999988653 34456778888888877 79999999999974
Q ss_pred ---CCeEEEEEEcccCCCchhhccCCCcccccCHH----------------------HHHHHHhccccccCCCceeceee
Q 003402 593 ---QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQDQHMNPKISDFG 647 (823)
Q Consensus 593 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d~~~~~KI~DFG 647 (823)
++++|||||||.+||.-+++.... ...+.|. ||+..-.||+...++.+|+.|||
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFG 168 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFG 168 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeee
Confidence 579999999999999988875432 2222222 22233345666788999999999
Q ss_pred ceeecCCCccccccccccccccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc
Q 003402 648 MARMFGGDELQGNTKRIVGTYGYMSPEYALE-----GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC 722 (823)
Q Consensus 648 la~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-----~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~ 722 (823)
++..+... .....+.+||+.|||||++.- ..|+..+|+||+||+..||.-|.+|+......- .+.
T Consensus 169 vSaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr--------aLF 238 (953)
T KOG0587|consen 169 VSAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR--------ALF 238 (953)
T ss_pred eeeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--------hhc
Confidence 99987544 344456799999999999853 347889999999999999999999975433210 000
Q ss_pred cCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 723 KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 723 ~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.-. -.|-..-.-+.....++.+++..|+..|-+.||++.++++.
T Consensus 239 ~Ip-----RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 239 LIP-----RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred cCC-----CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 000 01111112244567889999999999999999999988763
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=211.66 Aligned_cols=216 Identities=24% Similarity=0.306 Sum_probs=160.0
Q ss_pred cceeEEeeeecC-CcEEEEEEeccCChhh-HHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCchhhccC
Q 003402 537 GFGPVYKGRLLN-GQEVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD 614 (823)
Q Consensus 537 ~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~-~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~ 614 (823)
+||.||+|+... ++.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|..++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999865 8999999997654444 68899999999999999999999999999999999999999999998865
Q ss_pred CCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccccccccccccccc
Q 003402 615 PTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672 (823)
Q Consensus 615 ~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmA 672 (823)
... +.+.....++ .+|..+.++.++|+|||++....... ......|+..|++
T Consensus 81 ~~~---~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~ 154 (244)
T smart00220 81 RGR---LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMA 154 (244)
T ss_pred ccC---CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCC
Confidence 332 2222222222 22333667899999999998775432 2234578899999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHH
Q 003402 673 PEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVAL 752 (823)
Q Consensus 673 PE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~ 752 (823)
||.+....++.++||||||++++||++|+.|+..... ...... ......... ..........+.+++.
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~i~ 222 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-LLELFK----KIGKPKPPF-------PPPEWKISPEAKDLIR 222 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHH----HHhccCCCC-------ccccccCCHHHHHHHH
Confidence 9999988899999999999999999999988754211 111111 111110000 0000003457888999
Q ss_pred HccccCcCCCCCHHHHHH
Q 003402 753 LCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 753 ~Cl~~dP~~RPt~~evl~ 770 (823)
+|++.+|++||++.++++
T Consensus 223 ~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHccCCchhccCHHHHhh
Confidence 999999999999999987
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-24 Score=249.80 Aligned_cols=240 Identities=21% Similarity=0.251 Sum_probs=181.8
Q ss_pred HHHHHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 003402 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ 593 (823)
Q Consensus 518 ~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~ 593 (823)
.+++...++|.+.++||+|+||.|...+... ++.+|.|++++- .......|..|-.+|.--+.+=||+|.-.|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 4455566889999999999999999999865 789999999862 223345789999999998999999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCC
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
.++|+|||||+||+|-.++..... .|.++|.||+.++.||+.|..|++||+|||-+-.+..
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence 999999999999999888854431 2678999999999999999999999999999887765
Q ss_pred Ccccccccccccccccccccccc----C-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccc
Q 003402 655 DELQGNTKRIVGTYGYMSPEYAL----E-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~----~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 729 (823)
+.... ....+|||-|++||++. + +.|+...|-||+||++|||+.|..||... .+..-............
T Consensus 228 dG~V~-s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-----slveTY~KIm~hk~~l~ 301 (1317)
T KOG0612|consen 228 DGTVR-SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-----SLVETYGKIMNHKESLS 301 (1317)
T ss_pred CCcEE-eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----HHHHHHHHHhchhhhcC
Confidence 55333 33479999999999985 3 67999999999999999999999998421 22221111111111111
Q ss_pred ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCC---HHHHHHH
Q 003402 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT---MSDVVSM 771 (823)
Q Consensus 730 l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt---~~evl~~ 771 (823)
+ | .....++...+++..-+. +|+.|.. +.++-.+
T Consensus 302 F--P-----~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 302 F--P-----DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred C--C-----cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 1 1 012244555666655443 7888877 8887664
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-22 Score=212.09 Aligned_cols=202 Identities=16% Similarity=0.072 Sum_probs=147.1
Q ss_pred ccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCchhhccC
Q 003402 536 GGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD 614 (823)
Q Consensus 536 G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~ 614 (823)
|.||.||+++.. +++.+|+|++.... ++.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999875 47899999997542 344566666677899999999999999999999999999999888753
Q ss_pred CCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccccccccccccc
Q 003402 615 PTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675 (823)
Q Consensus 615 ~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~ 675 (823)
.... |..++.|++..+.||+.+.++.+|++|||++..+... .....++..|||||.
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~ 153 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEV 153 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCCcc
Confidence 2110 1122333344445566688889999999988765432 122456778999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHcc
Q 003402 676 ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCV 755 (823)
Q Consensus 676 ~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl 755 (823)
+....++.++||||+|+++|||++|+.|+...... ..... ....+......+.+++.+|+
T Consensus 154 ~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------------~~~~~----~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 154 GGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------------INTHT----TLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred cCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------------ccccc----ccCCcccCCHHHHHHHHHHc
Confidence 98888999999999999999999999775322110 00000 00111223456788999999
Q ss_pred ccCcCCCCCHHH
Q 003402 756 QENAEDRPTMSD 767 (823)
Q Consensus 756 ~~dP~~RPt~~e 767 (823)
+.||++||++.+
T Consensus 214 ~~dp~~R~~~~~ 225 (237)
T cd05576 214 QFNPTERLGAGV 225 (237)
T ss_pred cCCHHHhcCCCc
Confidence 999999999743
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-22 Score=230.14 Aligned_cols=240 Identities=18% Similarity=0.215 Sum_probs=150.4
Q ss_pred HhcCcceeeeeccccceeEEeeee-----------------cCCcEEEEEEeccCChhhHHHH--------------HHH
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRL-----------------LNGQEVAVKRLSNQSGQGLKEF--------------KNE 571 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~-----------------~~~~~VAVK~l~~~~~~~~~~f--------------~~E 571 (823)
..++|++.++||+|+||+||+|.+ ..++.||||++........++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 2356899999875433333334 447
Q ss_pred HHHHHhcCCCce-----eeEEeEEEe--------CCeEEEEEEcccCCCchhhccCCCc---------------------
Q 003402 572 MMLIAKLQHRNL-----VRLLGCCIE--------QGEKILIYEYMVNKSLDVFLFDPTK--------------------- 617 (823)
Q Consensus 572 v~~l~~l~H~Ni-----v~l~g~~~~--------~~~~~lV~Ey~~~gsL~~~l~~~~~--------------------- 617 (823)
+..+.+++|.++ ++++++|.. .+..+|||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777788877654 778888764 3578999999999999998864210
Q ss_pred ccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCcccccccccccccccccccc
Q 003402 618 KHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675 (823)
Q Consensus 618 ~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~ 675 (823)
...++|.. |+....||+.+.++.+||+|||+++.+..... .......+|+.|+|||.
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPPEE 381 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeChhh
Confidence 00112222 22233445557788999999999986543221 11112345889999998
Q ss_pred ccCCC--------------------C--CchhhHHHHHHHHHHHHhCCC-CCCCCCCCccch-----hHHHHhhccCCcc
Q 003402 676 ALEGV--------------------F--SVKSDVFSFGVLMLEILSSKK-NTGVYNTDSFNL-----LGHAWSLCKNDRA 727 (823)
Q Consensus 676 ~~~~~--------------------~--s~ksDVwSfGvvl~Elltg~~-p~~~~~~~~~~l-----~~~~~~~~~~~~~ 727 (823)
+.... | ..+.||||+||+++||+++.. |+.........+ ....|+.......
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~ 461 (507)
T PLN03224 382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKY 461 (507)
T ss_pred hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCC
Confidence 76432 1 134799999999999999875 442111000000 0011111111110
Q ss_pred ccccCcccccCCCHHHHHHHHHHHHHccccCc---CCCCCHHHHHHH
Q 003402 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENA---EDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP---~~RPt~~evl~~ 771 (823)
+- ...........+++..++..+| .+|+|++|++++
T Consensus 462 ----~~----~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 462 ----DF----SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ----Cc----ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 00 0111224556778888888765 789999998874
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-23 Score=229.87 Aligned_cols=222 Identities=19% Similarity=0.197 Sum_probs=171.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++.|.+...+|+|+|+.|-.+... +++..|||++.+.. .+-.+|+.++... +||||+++.+.+.++.+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 577888899999999999999765 47899999997652 2234577555555 79999999999999999999999
Q ss_pred cccCCCchhhccCCCcc------------------cccCHHHHHHHHhcccc-ccCCCceeceeeceeecCCCccccccc
Q 003402 602 YMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQ-DQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~-d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
++.+|-|.+.+...... |..+..||+..+.||+. ++.+++||+|||.++.+..+ ..
T Consensus 397 ~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~ 471 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CD 471 (612)
T ss_pred hccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-----hc
Confidence 99999876666432211 23344456666778888 58999999999999987554 22
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
+.+-|..|.|||++....|++++|+||||++||||++|+.|+...+.+ .. +......+.+...
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~e----------------i~~~i~~~~~s~~ 534 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IE----------------IHTRIQMPKFSEC 534 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HH----------------HHHhhcCCccccc
Confidence 346688999999999999999999999999999999999998654443 11 1111112223344
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+....+++.+|||.||.+||+|.++...
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 56678889999999999999999998774
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-22 Score=206.77 Aligned_cols=229 Identities=20% Similarity=0.319 Sum_probs=170.1
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|.+.++||+|+|.+|..+++.. .+.+|+|.+++. ..+..+-...|-.+.... +||.+|-|..++.....+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 3678999999999999999998865 688999998753 223445566777777665 79999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|.||+++|+|--++....+. |.-++..|+.+..|++.|..+.+|+.|+|+.|.--.. ..
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~--gd 406 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP--GD 406 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCC--Cc
Confidence 99999999997766543221 1122333455567788899999999999999853222 22
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC--ccchhHHHHhhccCCccccccCccccc
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD--SFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.+.+++|||.|+|||.+++..|...+|-|++||+++||+.|+.||+....+ ..+-..+..... ++..+
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi--------lekqi-- 476 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI--------LEKQI-- 476 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH--------hhhcc--
Confidence 456799999999999999999999999999999999999999999754432 222222222211 11111
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCC
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPT 764 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt 764 (823)
.++.....+...+...-+.+||.+|..
T Consensus 477 riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 477 RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 233445566777888899999999853
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-23 Score=234.19 Aligned_cols=224 Identities=24% Similarity=0.316 Sum_probs=167.2
Q ss_pred cceeeeeccccce-eEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 527 FSIQSKLGEGGFG-PVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 527 f~~~~~LG~G~fG-~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
|...+.+|.|+-| .||+|.. ++++||||++-. ...+-..+||.+|..- +||||||+++.-.++.++||..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 5555789999998 5799998 678999999843 2334567899999887 6999999999999999999999999
Q ss_pred CCCchhhccCC--C---------------------cccccCHHHHHHHHhccccc-----cCCCceeceeeceeecCCCc
Q 003402 605 NKSLDVFLFDP--T---------------------KKHLLGWQLRVRIIDGIAQD-----QHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 605 ~gsL~~~l~~~--~---------------------~~~~l~~~~r~~i~~~ia~d-----~~~~~KI~DFGla~~~~~~~ 656 (823)
..+|.+++... . +.|.+++.||+..++||+.. ....+||+|||++|.+..+.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 45888887552 0 01445566666666777663 34678999999999987665
Q ss_pred cc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 657 LQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSS-KKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 657 ~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.. .......||-||+|||.+....-+.++||+|+|||+|..++| ..||+.......+++...+.+ ..+
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L-------~~L--- 735 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTL-------VHL--- 735 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccce-------eee---
Confidence 32 234567899999999999999989999999999999999996 788865433222222211111 001
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.. ..++ +..+++..++..+|..||++.+|+.
T Consensus 736 -~~--~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 736 -EP--LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -cc--CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 11 1111 6778999999999999999999975
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-22 Score=233.22 Aligned_cols=238 Identities=19% Similarity=0.211 Sum_probs=143.2
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-----CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeE------EE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGC------CI 591 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~------~~ 591 (823)
..++|++.++||+|+||.||+|++.+ +..||||++..... .+.+..| .+....|.+++.++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 45789999999999999999998754 58999999864321 1222222 1122222222222211 34
Q ss_pred eCCeEEEEEEcccCCCchhhccCCCcc---------------------------------------cccCHHHHHHHHhc
Q 003402 592 EQGEKILIYEYMVNKSLDVFLFDPTKK---------------------------------------HLLGWQLRVRIIDG 632 (823)
Q Consensus 592 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~---------------------------------------~~l~~~~r~~i~~~ 632 (823)
++.+.+|||||+++++|.+++...... |...+.||+.++.|
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 567899999999999998887543210 11223334444556
Q ss_pred ccccc-CCCceeceeeceeecCCCccccccccccccccccccccccCC----------------------CCCchhhHHH
Q 003402 633 IAQDQ-HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG----------------------VFSVKSDVFS 689 (823)
Q Consensus 633 ia~d~-~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~----------------------~~s~ksDVwS 689 (823)
|+.+. ++.+||+|||+|+.+..... .......||++|||||.+... .++.++||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 66664 57899999999987643322 122346899999999965422 2345679999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc----cccccCccc----ccCC--CHHHHHHHHHHHHHccccCc
Q 003402 690 FGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR----AHELMDPVL----QNEV--SLPMLVRYINVALLCVQENA 759 (823)
Q Consensus 690 fGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~----~~~l~d~~l----~~~~--~~~~~~~~~~l~~~Cl~~dP 759 (823)
|||+||||+++..+.+. .+..........+. ....+.+.. ...+ .........+++..|++.||
T Consensus 365 lGviL~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred HHHHHHHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 99999999986655321 11111000000000 000011100 0000 00012234579999999999
Q ss_pred CCCCCHHHHHHH
Q 003402 760 EDRPTMSDVVSM 771 (823)
Q Consensus 760 ~~RPt~~evl~~ 771 (823)
++|||+.++++.
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999885
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-23 Score=215.67 Aligned_cols=235 Identities=24% Similarity=0.332 Sum_probs=160.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEecc--C-----ChhhHHHHHHHHHHHHhcCCCceeeEEeEEE-eCCe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSN--Q-----SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI-EQGE 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~--~-----~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~-~~~~ 595 (823)
++|-+++.||+|||+.|||+... ..+.||||+-.. . .....+.-.+|.++.+.|.||.||++++++. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 34667789999999999999754 478899997532 1 1122345678999999999999999999986 5567
Q ss_pred EEEEEEcccCCCchhhccCCCccc-ccCHHHHHHH--------------------Hhcccc---ccCCCceeceeeceee
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKH-LLGWQLRVRI--------------------IDGIAQ---DQHMNPKISDFGMARM 651 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~-~l~~~~r~~i--------------------~~~ia~---d~~~~~KI~DFGla~~ 651 (823)
.+-|+|||++.+|+-||....... ...-...++| +.||+. ...+.+||.||||+|+
T Consensus 543 FCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 889999999999999996432110 0000011111 122222 3456789999999999
Q ss_pred cCCCcccc-----ccccccccccccccccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc
Q 003402 652 FGGDELQG-----NTKRIVGTYGYMSPEYALEG----VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC 722 (823)
Q Consensus 652 ~~~~~~~~-----~~~~~~Gt~~YmAPE~~~~~----~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~ 722 (823)
+..+.+.. .+....||..|++||.+.-+ +++.|+||||.|||+|..+.|++||+-..... +++.
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dILq------ 695 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DILQ------ 695 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HHHh------
Confidence 87665432 34567899999999988643 47999999999999999999999996432221 1111
Q ss_pred cCCccccccCcc-cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 723 KNDRAHELMDPV-LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 723 ~~~~~~~l~d~~-l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
+.. ++... ..=...+....+...++..|++..-++|-...++..
T Consensus 696 -eNT---IlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 696 -ENT---ILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -hhc---hhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 111 11110 000111223456677899999999999987666543
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.4e-23 Score=208.54 Aligned_cols=232 Identities=19% Similarity=0.252 Sum_probs=168.5
Q ss_pred eeeccccceeEEeee-ecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 531 SKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~-~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
+.||+|+|+.|--+. +.+++++|||++.+.......+..+|++++...+ |+||++|+.+|+++...|||||-|.+|+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 789999999999886 5679999999999887777788999999999995 99999999999999999999999999999
Q ss_pred hhhccCCCc-------------------ccccCHHHHHHHHhcccc---ccCCCceeceeeceeecCCCc-----ccccc
Q 003402 609 DVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQ---DQHMNPKISDFGMARMFGGDE-----LQGNT 661 (823)
Q Consensus 609 ~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~---d~~~~~KI~DFGla~~~~~~~-----~~~~~ 661 (823)
..+|..... .|..++.||+.+.+||+- +.---+||+||.|+.-+..+. .....
T Consensus 164 LshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L 243 (463)
T KOG0607|consen 164 LSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPEL 243 (463)
T ss_pred HHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccc
Confidence 888854321 133344555555566654 233357999999886543221 12233
Q ss_pred cccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc-----ccccc
Q 003402 662 KRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR-----AHELM 731 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~-----~~~l~ 731 (823)
.+.+|+..|||||+.. ...|+.+.|.||+|||||-|++|-+||-...+.... |..+. ...++
T Consensus 244 ~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG--------WdrGe~Cr~CQ~~LF 315 (463)
T KOG0607|consen 244 LTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG--------WDRGEVCRVCQNKLF 315 (463)
T ss_pred cCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC--------ccCCCccHHHHHHHH
Confidence 4578999999999863 235889999999999999999999999655443211 11111 11222
Q ss_pred CcccccCCCH------HHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 732 DPVLQNEVSL------PMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 732 d~~l~~~~~~------~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+-++.+.. ....+..+++...+..|+.+|-++.+++.
T Consensus 316 esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 316 ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 2222232222 23445566777777799999999999887
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.2e-23 Score=218.94 Aligned_cols=223 Identities=21% Similarity=0.317 Sum_probs=159.0
Q ss_pred eeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 530 QSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
.++||.|.||+||-|+.. +|+.||||.+.+. ......++++|+.+|.+++||.||.|...|+..+..++|||-+. |
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence 389999999999999875 5999999999754 23445789999999999999999999999999999999999994 5
Q ss_pred CchhhccCCCcc---------------------cccCHHHHHHHHhcccc---ccCCCceeceeeceeecCCCccccccc
Q 003402 607 SLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQ---DQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 607 sL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~---d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+..+.|....+. |...+.|.+.+.+||+. +.--.+||||||+||+++..... .
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR---r 724 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR---R 724 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh---h
Confidence 554444332221 11222222333344433 33446899999999999765443 3
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
.++||+.|+|||++++.-|...-|+||.|||+|--++|..||.... ++-...+. ...+-| ...-.+
T Consensus 725 sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----dIndQIQN-------AaFMyP---p~PW~e 790 (888)
T KOG4236|consen 725 SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----DINDQIQN-------AAFMYP---PNPWSE 790 (888)
T ss_pred hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----chhHHhhc-------cccccC---CCchhh
Confidence 5799999999999999999999999999999999999999984221 11111000 011111 111123
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.....++++-..+|..-++|-+..+-+.
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 4455677777888888888888776543
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-22 Score=203.38 Aligned_cols=183 Identities=25% Similarity=0.366 Sum_probs=135.3
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC-----CcEEEEEEeccCC-hhh-HHHHHHHHHHHHhcCCCceeeEEeEEEe-C
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQS-GQG-LKEFKNEMMLIAKLQHRNLVRLLGCCIE-Q 593 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~VAVK~l~~~~-~~~-~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-~ 593 (823)
.....|+...+||+|.||.||++.-.+ .+.+|+|+++... ..+ ...-.+|+.+++.++|||||.|..++.+ +
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 344678889999999999999995432 2379999997542 112 2457899999999999999999999988 8
Q ss_pred CeEEEEEEcccCCCchhhccCCC--cccccC---------------------H-HHHHHHHhccccc----cCCCceece
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPT--KKHLLG---------------------W-QLRVRIIDGIAQD----QHMNPKISD 645 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~--~~~~l~---------------------~-~~r~~i~~~ia~d----~~~~~KI~D 645 (823)
...+|++||.+. +|-+.|+... ..+.++ | .||+.+..||+.. +.+.+||+|
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence 899999999987 5555553211 111111 1 2344444555543 358999999
Q ss_pred eeceeecCCCcc-ccccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCC
Q 003402 646 FGMARMFGGDEL-QGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTG 705 (823)
Q Consensus 646 FGla~~~~~~~~-~~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~ 705 (823)
||+||++...-- -.....++-|+.|.|||.+.+.+ ||.+.|||+.|||+.||+|-++-|.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 999998754311 12334577899999999999865 8999999999999999999887664
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4e-22 Score=201.47 Aligned_cols=233 Identities=18% Similarity=0.171 Sum_probs=169.1
Q ss_pred HhcCccee-eeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe----CCe
Q 003402 523 ATENFSIQ-SKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE----QGE 595 (823)
Q Consensus 523 ~~~~f~~~-~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~----~~~ 595 (823)
.+++|++. ++||-|-.|+|-.+..+. ++.+|+|.|... ..-++|+++.-+. .|||||++++++.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45677765 689999999999998764 788999998653 3457899887776 69999999999864 457
Q ss_pred EEEEEEcccCCCchhhccCCCcc---------------------cccCHHHHHHHHhcccc---ccCCCceeceeeceee
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQ---DQHMNPKISDFGMARM 651 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~---d~~~~~KI~DFGla~~ 651 (823)
+++|||.|++|.|.+.+.+.... |...+.||+.+.+|++. ..+-.+||+|||+||.
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccc
Confidence 88999999999999988654431 44556666666666665 3566789999999996
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
-.. .....+.+-|+.|.|||++...+|+...|+||+||++|-|++|-+||....+... ..-+......+. .+.
T Consensus 214 t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai--spgMk~rI~~gq-y~F- 286 (400)
T KOG0604|consen 214 TQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--SPGMKRRIRTGQ-YEF- 286 (400)
T ss_pred cCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC--ChhHHhHhhccC-ccC-
Confidence 432 3344557789999999999999999999999999999999999999854433211 000111001000 000
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+--...++...+++...|..+|.+|.|+.+++..
T Consensus 287 ----P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 287 ----PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ----CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 000111235566778888999999999999999875
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.3e-21 Score=178.58 Aligned_cols=177 Identities=24% Similarity=0.323 Sum_probs=138.2
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+|...++||+|.||+||||+..+ ++.||+|+++.. +..-...-++|+.+++.++|.||||+++....++.+-||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 35556899999999999998655 788999988643 222345678999999999999999999999999999999999
Q ss_pred ccCCCchhhc--------------------cCCCcccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 603 MVNKSLDVFL--------------------FDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 603 ~~~gsL~~~l--------------------~~~~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
|.. +|..+. ....-.|.....||+.+.+|++.+.++..|++|||+|+.++-.- ....
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv--rcys 159 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV--RCYS 159 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce--Eeee
Confidence 953 333332 11122244556677778888999999999999999999775321 1122
Q ss_pred cccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCC
Q 003402 663 RIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTG 705 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~ 705 (823)
..+-|..|.+|.++.+.+ |++..|+||-||++.|+....+|..
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplf 203 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCC
Confidence 346689999999998865 8999999999999999998666653
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-22 Score=215.25 Aligned_cols=229 Identities=21% Similarity=0.267 Sum_probs=178.1
Q ss_pred cCcceeeeeccccceeEEeeeecCCc-EEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQ-EVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~-~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.+++.+..||-||||.|=+.+..+.. ..|+|.+++. .....+....|-.+|...+.|.||+||--+.+....|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45667789999999999999876543 4889988754 3334566888999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|-|-+|.|-..|.+... .|..++..|+.+++|+..|.++-+||.|||+||.++.. ..+
T Consensus 500 EaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g---~KT 576 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG---RKT 576 (732)
T ss_pred HhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC---Cce
Confidence 99999999877765432 14455566777788999999999999999999998654 356
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-ccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
-+++||+.|.|||++.+.-.+.++|.||+||++|||++|++||...+.. ..+++- + -+|. -+++
T Consensus 577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL------k------Gid~---i~~P 641 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL------K------GIDK---IEFP 641 (732)
T ss_pred eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH------h------hhhh---hhcc
Confidence 7899999999999999999999999999999999999999998654322 111110 0 0111 1233
Q ss_pred HHHHHHHHHHHHHccccCcCCCCC-----HHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPT-----MSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~ 771 (823)
........+++......+|.+|.- +.+|-++
T Consensus 642 r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 642 RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 444556677888877889999976 5566554
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-22 Score=198.84 Aligned_cols=244 Identities=20% Similarity=0.283 Sum_probs=163.5
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEec--cCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--------CCe
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLS--NQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--------QGE 595 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~--~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--------~~~ 595 (823)
|+-..+||+|.||.||+++..+ ++.||+|++- ......-..-++|+++|..+.|+|++.++..|.. ...
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 4445799999999999998765 7889998652 2112223456789999999999999999998854 245
Q ss_pred EEEEEEcccCCCchhhccCCCc--------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK--------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~--------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
.+||+.+|+. +|.-+|.+... .|...+.||+.++.|++.+.++.+||+|||+|+.+...
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~ 177 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTS 177 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecc
Confidence 8999999976 55555544321 13445677788889999999999999999999876432
Q ss_pred c--cccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-ccchhHHHH-----hhccCCc
Q 003402 656 E--LQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHAW-----SLCKNDR 726 (823)
Q Consensus 656 ~--~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~-~~~l~~~~~-----~~~~~~~ 726 (823)
. .....+..+-|..|.+||.+.+. .|+++.|||.-|||+.||.||.+-+....+. ...++...- ..|.+-.
T Consensus 178 ~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d 257 (376)
T KOG0669|consen 178 KNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVD 257 (376)
T ss_pred cccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcc
Confidence 2 11222234569999999998865 5999999999999999999998765432221 112211100 1111111
Q ss_pred ccccc-----CcccccCCC--HHH------HHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 AHELM-----DPVLQNEVS--LPM------LVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~~~l~-----d~~l~~~~~--~~~------~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
-.++. .|...+... .+. .....+++...+..||.+|+++++++..
T Consensus 258 ~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 258 NLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 11111 111111100 011 2246678888899999999999998764
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-21 Score=201.54 Aligned_cols=238 Identities=20% Similarity=0.198 Sum_probs=165.5
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcC-C-Cc----eeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-H-RN----LVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H-~N----iv~l~g~~~~~~~~ 596 (823)
++.|.+..++|+|.||.|-++.... +..||||+++.. ....+.-+-|++++.+|. | |+ +|++.+++.-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 5789999999999999999997654 689999999764 234456677999999993 2 33 78888999999999
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHH----------------------HHHHHhcccc-------------------
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQ------------------- 635 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~------------------- 635 (823)
+||+|.| +-|+.++|....... .+..+ -+.+++||+.
T Consensus 167 Civfell-G~S~~dFlk~N~y~~-fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r 244 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIP-FPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR 244 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccc-cchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceec
Confidence 9999998 558888887643321 11111 1122334432
Q ss_pred -ccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch
Q 003402 636 -DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL 714 (823)
Q Consensus 636 -d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l 714 (823)
-.+..+||.|||-|+...... ..++.|..|.|||++++-.++.++||||+||||.|+.||..-|..... ...+
T Consensus 245 ~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen-~EHL 318 (415)
T KOG0671|consen 245 PLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN-LEHL 318 (415)
T ss_pred cCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc-HHHH
Confidence 124468999999998754332 357889999999999999999999999999999999999987644331 1111
Q ss_pred hHHHHhhccC-----------------Ccc-----------ccccC---cc-cccCCCHHHHHHHHHHHHHccccCcCCC
Q 003402 715 LGHAWSLCKN-----------------DRA-----------HELMD---PV-LQNEVSLPMLVRYINVALLCVQENAEDR 762 (823)
Q Consensus 715 ~~~~~~~~~~-----------------~~~-----------~~l~d---~~-l~~~~~~~~~~~~~~l~~~Cl~~dP~~R 762 (823)
..+.....+ +++ .-..+ +. ........+..++++++..++..||.+|
T Consensus 319 -aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R 397 (415)
T KOG0671|consen 319 -AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR 397 (415)
T ss_pred -HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence 111111110 000 00000 00 0012234567789999999999999999
Q ss_pred CCHHHHHHH
Q 003402 763 PTMSDVVSM 771 (823)
Q Consensus 763 Pt~~evl~~ 771 (823)
+|++|.+..
T Consensus 398 iTl~EAL~H 406 (415)
T KOG0671|consen 398 ITLREALSH 406 (415)
T ss_pred ccHHHHhcC
Confidence 999998764
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-20 Score=204.06 Aligned_cols=184 Identities=22% Similarity=0.305 Sum_probs=150.9
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG---QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.-|..++.||-|+||+|.+++-.| ...+|.|.|++.+. ......+.|-.||+.-+.+=||+|+-.|.+.+.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 458888999999999999997544 67899999987643 23445788999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCC-------------------cccccCHHHHHHHHhccccccCCCceeceeeceeecC---CCccc
Q 003402 601 EYMVNKSLDVFLFDPT-------------------KKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFG---GDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~-------------------~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~---~~~~~ 658 (823)
||+++|++-.+|.... .-|..++.||+.+..||+.|.++++||.||||+.-+. ...++
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY 788 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 788 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence 9999999977764321 1266788999999999999999999999999985321 00000
Q ss_pred -------------------------------------cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 003402 659 -------------------------------------GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701 (823)
Q Consensus 659 -------------------------------------~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~ 701 (823)
......+||+.|+|||++...-|+.-.|.||.|||||||+.|+
T Consensus 789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~ 868 (1034)
T KOG0608|consen 789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQ 868 (1034)
T ss_pred cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCC
Confidence 0012358999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 003402 702 KNTGVYN 708 (823)
Q Consensus 702 ~p~~~~~ 708 (823)
.||....
T Consensus 869 ~pf~~~t 875 (1034)
T KOG0608|consen 869 PPFLADT 875 (1034)
T ss_pred CCccCCC
Confidence 9986543
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-19 Score=180.29 Aligned_cols=188 Identities=33% Similarity=0.550 Sum_probs=150.5
Q ss_pred eccccceeEEeeeecC-CcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCchh
Q 003402 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDV 610 (823)
Q Consensus 533 LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 610 (823)
||+|++|.||++...+ ++.++||.+...... ..+.+.+|++.+.+++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999865 889999999765332 35789999999999999999999999999999999999999999999
Q ss_pred hccCCCcccccCHHHHHHHH----------------------hcccccc-CCCceeceeeceeecCCCcccccccccccc
Q 003402 611 FLFDPTKKHLLGWQLRVRII----------------------DGIAQDQ-HMNPKISDFGMARMFGGDELQGNTKRIVGT 667 (823)
Q Consensus 611 ~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~-~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt 667 (823)
++.... ..+.+..+..++ .+|..+. +..++|+|||.+........ ......+.
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~ 156 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGT 156 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCC
Confidence 986531 112333222222 2233355 78899999999987644321 12235678
Q ss_pred ccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHH
Q 003402 668 YGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVR 746 (823)
Q Consensus 668 ~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~ 746 (823)
..|++||..... .++.++|+|++|++++|| ..
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------------~~ 189 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------------PE 189 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------HH
Confidence 899999999887 889999999999999998 46
Q ss_pred HHHHHHHccccCcCCCCCHHHHHHH
Q 003402 747 YINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 747 ~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.+++..|++.+|++||++.++++.
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhC
Confidence 7788999999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-21 Score=182.70 Aligned_cols=182 Identities=26% Similarity=0.309 Sum_probs=141.2
Q ss_pred HHHhcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~ 597 (823)
..+.+.+.-.+.||+|++|.|-+-++ .+|+..|||++... ..+..++.++|+.+..+. .+|.+|+++|...+....+
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 33445556668999999999988876 46899999999754 345567788899876665 7899999999999999999
Q ss_pred EEEEcccCCCchhhccC-----CCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecC
Q 003402 598 LIYEYMVNKSLDVFLFD-----PTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~-----~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
+.||.|.- ||+.|-.. ... ...+...||+.+..||+.+.++++||||||++-.+-
T Consensus 122 IcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 122 ICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred EeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 99999954 66555321 000 023566778888899999999999999999998774
Q ss_pred CCccccccccccccccccccccccC----CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALE----GVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~----~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
..-. .+-..|-..|||||.+.. ..|+.||||||+|+.+.||.+++.|+..
T Consensus 201 dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 201 DSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred hhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 3211 112468889999998853 3689999999999999999999999753
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-21 Score=212.33 Aligned_cols=235 Identities=21% Similarity=0.319 Sum_probs=176.1
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
...++|++...+|.|.||.|||++... ++..|||.++-.......-..+|+.+++..+|||||.++|-+...+..++.|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 355789999999999999999998754 8899999998665555667788999999999999999999999999999999
Q ss_pred EcccCCCchhhccCC-------------------CcccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDP-------------------TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~-------------------~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|||.+|+|.+.-+-. ...|..+-.||+.+-.||...+.+.+|++|||.+..+... ....
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat--i~Kr 169 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT--IAKR 169 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhh--hhhh
Confidence 999999997754321 1123344456776777888899999999999999776432 2334
Q ss_pred cccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc-cccc
Q 003402 662 KRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP-VLQN 737 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~-~l~~ 737 (823)
+.+.||+.|||||+.. .+.|..++|||+.|+...|+---++|....... .+..+.. ....++ .+++
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm------r~l~LmT----kS~~qpp~lkD 239 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM------RALFLMT----KSGFQPPTLKD 239 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH------HHHHHhh----ccCCCCCcccC
Confidence 5689999999999874 667999999999999999998777764322111 0111111 111111 1221
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.....+-+-+++..|+-.+|.+||++..+++
T Consensus 240 --k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 --KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred --CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1223455677888999999999999987754
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.7e-19 Score=181.16 Aligned_cols=176 Identities=31% Similarity=0.432 Sum_probs=139.6
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
|.+.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567899999999999999876 889999999865444 56789999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHHHHH----HH------------------hccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVR----II------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~----i~------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+++|.+++...... +.+..... ++ .++..+.+..++|+|||++....... .....
T Consensus 81 ~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~-~~~~~ 157 (225)
T smart00221 81 GGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL-AALLK 157 (225)
T ss_pred CCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-ccccc
Confidence 99999998653321 22222221 11 22333567889999999998875432 11223
Q ss_pred cccccccccccccc-cCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003402 663 RIVGTYGYMSPEYA-LEGVFSVKSDVFSFGVLMLEILSSKKNTG 705 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~-~~~~~s~ksDVwSfGvvl~Elltg~~p~~ 705 (823)
...++..|++||.+ ....++.++|||+||++++||++|+.|+.
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 45788899999998 66778889999999999999999999984
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=187.29 Aligned_cols=127 Identities=18% Similarity=0.216 Sum_probs=89.2
Q ss_pred CceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC----ccchh
Q 003402 640 NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD----SFNLL 715 (823)
Q Consensus 640 ~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~----~~~l~ 715 (823)
.+||+|||-|-..... .+.-..|..|.|||++.+..|++.+|||||+|+++||+||..-|+...++ ..+.+
T Consensus 392 ~vKIaDlGNACW~~kh-----FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHi 466 (590)
T KOG1290|consen 392 RVKIADLGNACWVHKH-----FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHI 466 (590)
T ss_pred eEEEeeccchhhhhhh-----hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHH
Confidence 4789999988654322 12235789999999999999999999999999999999999877665443 22223
Q ss_pred HHHHhhc--------cCCc-cccccCc-----------------ccc--cCCCHHHHHHHHHHHHHccccCcCCCCCHHH
Q 003402 716 GHAWSLC--------KNDR-AHELMDP-----------------VLQ--NEVSLPMLVRYINVALLCVQENAEDRPTMSD 767 (823)
Q Consensus 716 ~~~~~~~--------~~~~-~~~l~d~-----------------~l~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~e 767 (823)
.++-+++ ..++ ..+.++. .+. -+++.++..++.+++.-+|+.+|++|||+.+
T Consensus 467 A~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~ 546 (590)
T KOG1290|consen 467 ALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQ 546 (590)
T ss_pred HHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHH
Confidence 3222221 1111 1222221 111 1356677888999999999999999999999
Q ss_pred HHHH
Q 003402 768 VVSM 771 (823)
Q Consensus 768 vl~~ 771 (823)
.++.
T Consensus 547 cl~h 550 (590)
T KOG1290|consen 547 CLKH 550 (590)
T ss_pred HhcC
Confidence 8875
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.4e-20 Score=184.03 Aligned_cols=227 Identities=20% Similarity=0.318 Sum_probs=163.5
Q ss_pred cceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
+.+..+|.+...|..|+|++. |..+++|+|... +....+.|..|.-.++-+.||||..++|.|..+.++.+|..|||
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 345578999999999999995 455667777643 33445789999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcc---cccCHHHHHHHHhcccc--------------------ccCCCceeceeeceeecCCCcccccc
Q 003402 605 NKSLDVFLFDPTKK---HLLGWQLRVRIIDGIAQ--------------------DQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 605 ~gsL~~~l~~~~~~---~~l~~~~r~~i~~~ia~--------------------d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
.|||...|+....- +.......+.+++|++. |++++++|+- +=+|+.- + .
T Consensus 271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarism-ad~kfsf----q--e 343 (448)
T KOG0195|consen 271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSF----Q--E 343 (448)
T ss_pred chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheec-ccceeee----e--c
Confidence 99999999875432 22333444556666653 5555555531 1111100 0 0
Q ss_pred ccccccccccccccccCCCC---CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 662 KRIVGTYGYMSPEYALEGVF---SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~---s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
....-.+.||+||.+...+- -.++|+|||.|+|||+.|+.-||......... .++.-..++..
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg--------------mkialeglrv~ 409 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG--------------MKIALEGLRVH 409 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh--------------hhhhhcccccc
Confidence 11223678999999976654 35799999999999999999998654332111 11122234445
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+++.....+.+++.-|+.+||.+||.+..|+-.||..
T Consensus 410 ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 410 IPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 6667777888999999999999999999999999864
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-19 Score=197.76 Aligned_cols=176 Identities=23% Similarity=0.281 Sum_probs=141.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh--------hhHHHHHHHHHHHHhcC---CCceeeEEeEEEe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG--------QGLKEFKNEMMLIAKLQ---HRNLVRLLGCCIE 592 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~--------~~~~~f~~Ev~~l~~l~---H~Niv~l~g~~~~ 592 (823)
.+|...+.+|+|+||.|+.+.++. ...|+||.+.+... ..+-..-.||++|+.++ |+||++++.+|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 358889999999999999999875 57899999875421 11123456999999997 9999999999999
Q ss_pred CCeEEEEEEcccC-CCchhhccCC-------------------CcccccCHHHHHHHHhccccccCCCceeceeeceeec
Q 003402 593 QGEKILIYEYMVN-KSLDVFLFDP-------------------TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 593 ~~~~~lV~Ey~~~-gsL~~~l~~~-------------------~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
++.+||+||-..- -+|.++|... .+.|..++.||+.+-+|+..|.++-+||.|||-|...
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ 720 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYT 720 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhh
Confidence 9999999997643 4666666321 1225566777777778888899999999999999876
Q ss_pred CCCccccccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNT 704 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~ 704 (823)
.... ...++||.+|.|||++.+.+| +..-|||++||+||.|+....|+
T Consensus 721 ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 721 KSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred cCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 5433 345899999999999999998 56789999999999999888775
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.8e-19 Score=171.10 Aligned_cols=241 Identities=18% Similarity=0.295 Sum_probs=171.6
Q ss_pred hcCcceeeeeccccceeEEeee-ecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeC--CeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQ--GEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~--~~~~lV 599 (823)
.++|++.+++|+|.|+.||.|. ..+.+.++||.|+.. ..+.+.+|+++|..+. |||||+|++...++ ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4678999999999999999997 456789999999753 3467899999999997 99999999999875 467899
Q ss_pred EEcccCCCchhhcc----------------CCCcccccCHHHHHHHHhcccccc-CCCceeceeeceeecCCCccccccc
Q 003402 600 YEYMVNKSLDVFLF----------------DPTKKHLLGWQLRVRIIDGIAQDQ-HMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~----------------~~~~~~~l~~~~r~~i~~~ia~d~-~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+||+.|.+...+-. .....|..++.||+.++.|+..|+ ....+|.|+|||..........
T Consensus 114 FE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn--- 190 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN--- 190 (338)
T ss_pred hhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceee---
Confidence 99999987654421 112235566777788888888775 4568999999998775443222
Q ss_pred cccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC------CccccccCccc
Q 003402 663 RIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN------DRAHELMDPVL 735 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~------~~~~~l~d~~l 735 (823)
-.+.+..|--||.+.+ ..|+..-|+|||||+|.+|+..+.||........++...+..+-.. .+..--+|+..
T Consensus 191 VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~ 270 (338)
T KOG0668|consen 191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQF 270 (338)
T ss_pred eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhH
Confidence 1355677889998876 4588999999999999999999999865444433443332221110 00011122221
Q ss_pred cc----------------CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 736 QN----------------EVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 736 ~~----------------~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.+ +...-...+.++++-..+..|-.+|||++|...
T Consensus 271 ~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 271 EDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred hhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 11 001112356778888899999999999998765
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.5e-19 Score=176.90 Aligned_cols=176 Identities=24% Similarity=0.322 Sum_probs=134.9
Q ss_pred ceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CeEEEE
Q 003402 528 SIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GEKILI 599 (823)
Q Consensus 528 ~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~~~lV 599 (823)
+-.+-||-|+||.||..+.+ +|+.||.|++.+. +-...+.+.+|++++.-++|.|++..++...-. .+.|+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34478999999999999876 4899999998653 223457899999999999999999998876543 356788
Q ss_pred EEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 600 YEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+|.|. .+|...|..+.. .|.-.+.||+.+.-|++.+.+...||+|||||+.-..++....
T Consensus 136 TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM 214 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM 214 (449)
T ss_pred HHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence 88884 466666644322 1333455566666677778899999999999998766554333
Q ss_pred cccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTG 705 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~ 705 (823)
+ ..+-|..|.|||.+++.+ |+.+.||||.||++.|++-++.-|.
T Consensus 215 T-qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 215 T-HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred H-HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 3 456688999999999865 8999999999999999997776553
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-17 Score=165.54 Aligned_cols=129 Identities=14% Similarity=0.076 Sum_probs=88.9
Q ss_pred HhccccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003402 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNT 709 (823)
Q Consensus 630 ~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~ 709 (823)
..||..+.++.+|+ ||+++...... ..||+.|||||++.+..++.|+|||||||++|||++|+.|+.....
T Consensus 39 p~Nil~~~~~~~~~--fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~ 109 (176)
T smart00750 39 SGNILLTWDGLLKL--DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE 109 (176)
T ss_pred cccEeEcCccceee--ccceEeecccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch
Confidence 34566678888999 99998764322 2689999999999999999999999999999999999999753322
Q ss_pred CccchhHHHHhhccCCccccccCcccccCCCHHHH--HHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 710 DSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML--VRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 710 ~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~--~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+....... .. . ++.. ........ .++.+++..||+.+|++||++.++++.+...
T Consensus 110 ~~~~~~~~~~~~-~~-----~-~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 110 LSAILEILLNGM-PA-----D-DPRD-RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hcHHHHHHHHHh-cc-----C-Cccc-cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 111111111110 00 0 0000 00111122 2689999999999999999999999987543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-17 Score=180.14 Aligned_cols=177 Identities=23% Similarity=0.250 Sum_probs=133.3
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcC------CCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ------HRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~------H~Niv~l~g~~~~~~~~ 596 (823)
-..|.+....|+|-|++|.+|.... |+.||||+|.+. .-..+.=+.|+++|++|+ .-|.++|+-.|...+++
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 3568888999999999999998754 789999999764 223455678999999995 34799999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcccc----------------------cCHHHHHHHHhcccccc-CCCceeceeeceeecC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHL----------------------LGWQLRVRIIDGIAQDQ-HMNPKISDFGMARMFG 653 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~----------------------l~~~~r~~i~~~ia~d~-~~~~KI~DFGla~~~~ 653 (823)
+||+|-+ .-+|.+.|.......- .+..|.+.++.||+.++ ...+||||||-|...+
T Consensus 510 ClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 510 CLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFAS 588 (752)
T ss_pred EEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccc
Confidence 9999977 4467777754322111 11122223334454443 4567999999998877
Q ss_pred CCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
.++... ..-+.-|.|||++.+-+|+...|+||.||.||||.||+--|..
T Consensus 589 eneitP----YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 589 ENEITP----YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred cccccH----HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 665432 3345679999999999999999999999999999999976643
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.3e-17 Score=171.42 Aligned_cols=248 Identities=21% Similarity=0.301 Sum_probs=169.0
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC----CcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~ 596 (823)
...+.|..+++||+|.|++||++.+.. .+.||+|.+...+ ......+|+++|..+ -|.||+++.+++..++..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 344668889999999999999997643 5789999997643 346789999999998 489999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCc----------------ccccCHHHHHHHHhccccc-cCCCceeceeeceeecCCCc---
Q 003402 597 ILIYEYMVNKSLDVFLFDPTK----------------KHLLGWQLRVRIIDGIAQD-QHMNPKISDFGMARMFGGDE--- 656 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~----------------~~~l~~~~r~~i~~~ia~d-~~~~~KI~DFGla~~~~~~~--- 656 (823)
.+|+||+++-...++...... .|..++.||+.+..|++-+ .-..-.|.|||||.......
T Consensus 111 ~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~ 190 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTE 190 (418)
T ss_pred EEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhh
Confidence 999999999888777654322 2444555555555555543 23345799999997211000
Q ss_pred -------------------------------ccc--------ccccccccccccccccccC-CCCCchhhHHHHHHHHHH
Q 003402 657 -------------------------------LQG--------NTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLE 696 (823)
Q Consensus 657 -------------------------------~~~--------~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~E 696 (823)
... ......||+||.|||++.. ..-++++||||-|||++-
T Consensus 191 ~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Ls 270 (418)
T KOG1167|consen 191 HSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLS 270 (418)
T ss_pred hhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeeh
Confidence 000 0012469999999999875 456899999999999999
Q ss_pred HHhCCCCCCCCCCCccchhHHHHhhc---------cCCc--ccc---------cc--------Ccccc-------cC-CC
Q 003402 697 ILSSKKNTGVYNTDSFNLLGHAWSLC---------KNDR--AHE---------LM--------DPVLQ-------NE-VS 740 (823)
Q Consensus 697 lltg~~p~~~~~~~~~~l~~~~~~~~---------~~~~--~~~---------l~--------d~~l~-------~~-~~ 740 (823)
+++++.||.....+...+...+-..- ..++ +.+ +. ..... .. ..
T Consensus 271 lls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~ 350 (418)
T KOG1167|consen 271 LLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGS 350 (418)
T ss_pred hhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecccc
Confidence 99999998766555333332211110 0111 000 00 00000 00 00
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.++.-+|++.||.+|-|+++.++.
T Consensus 351 d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 351 DVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 1123357889999999999999999998764
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-17 Score=202.57 Aligned_cols=177 Identities=20% Similarity=0.263 Sum_probs=113.9
Q ss_pred hcCC-CceeeEEeEE-------EeCCeEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHH
Q 003402 577 KLQH-RNLVRLLGCC-------IEQGEKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVR 628 (823)
Q Consensus 577 ~l~H-~Niv~l~g~~-------~~~~~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~ 628 (823)
.++| +||+++++.| .+.+..++++||+ .++|.++|...... |..+..||+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 4455 6888888887 3335677888988 55999998643211 3334455555
Q ss_pred HHhcccc-------------------ccCCCceeceeeceeecCCCcc--------------cccccccccccccccccc
Q 003402 629 IIDGIAQ-------------------DQHMNPKISDFGMARMFGGDEL--------------QGNTKRIVGTYGYMSPEY 675 (823)
Q Consensus 629 i~~~ia~-------------------d~~~~~KI~DFGla~~~~~~~~--------------~~~~~~~~Gt~~YmAPE~ 675 (823)
++.||+. +.+..+||+|||+++....... ........||+.|||||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 6666665 3456678888888875321000 000112468999999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHcc
Q 003402 676 ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCV 755 (823)
Q Consensus 676 ~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl 755 (823)
+.+..|+.++|||||||+||||++|..|+.... .... .. .. ..+.+.. .....+...++.+||
T Consensus 187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~---~~-~~----~~~~~~~-----~~~~~~~~~~~~~~L 249 (793)
T PLN00181 187 DNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMS---SL-RH----RVLPPQI-----LLNWPKEASFCLWLL 249 (793)
T ss_pred hccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHH---HH-HH----hhcChhh-----hhcCHHHHHHHHHhC
Confidence 999999999999999999999999887643110 0000 00 00 0111110 112334567888999
Q ss_pred ccCcCCCCCHHHHHHH
Q 003402 756 QENAEDRPTMSDVVSM 771 (823)
Q Consensus 756 ~~dP~~RPt~~evl~~ 771 (823)
+.+|.+||+|.||+++
T Consensus 250 ~~~P~~Rps~~eil~h 265 (793)
T PLN00181 250 HPEPSCRPSMSELLQS 265 (793)
T ss_pred CCChhhCcChHHHhhc
Confidence 9999999999999864
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.3e-17 Score=166.48 Aligned_cols=241 Identities=22% Similarity=0.200 Sum_probs=161.4
Q ss_pred CcceeeeeccccceeEEeeee-cCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------CeE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------GEK 596 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~~~ 596 (823)
+|.-...+|.|.- .|-.+.. -.++.||+|++... .....++-.+|..++..+.|+||++++.++.-. .+.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 3555567777776 5555533 24789999988542 234456778899999999999999999999754 468
Q ss_pred EEEEEcccCCCchhhccCC-----------------CcccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 597 ILIYEYMVNKSLDVFLFDP-----------------TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~-----------------~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+|||||. .+|...+... ...|...+.||+.++.+|....+..+||.|||+|+.-..+ -
T Consensus 97 y~v~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~---~ 172 (369)
T KOG0665|consen 97 YLVMELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD---F 172 (369)
T ss_pred HHHHHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc---c
Confidence 99999995 4665554311 1124455667777788888889999999999999864433 2
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-------------Ccc----chhHHHHhhc
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNT-------------DSF----NLLGHAWSLC 722 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~-------------~~~----~l~~~~~~~~ 722 (823)
..+..+.|.-|.|||++.+..|.+++||||.||++.||++|+--|..... ... .+...+....
T Consensus 173 ~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv 252 (369)
T KOG0665|consen 173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYV 252 (369)
T ss_pred ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHh
Confidence 34457889999999999998899999999999999999999865431100 000 0111111111
Q ss_pred cCC------ccccccCc-cccc--CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 723 KND------RAHELMDP-VLQN--EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 723 ~~~------~~~~l~d~-~l~~--~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
... ...+++.. .... +.+.........++..+|-.||++|-++++++..
T Consensus 253 ~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 253 ENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 100 00111110 0000 1112234456778889999999999999999886
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-16 Score=160.32 Aligned_cols=234 Identities=17% Similarity=0.241 Sum_probs=162.8
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeE-EEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGC-CIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~-~~~~~~~~lV~E 601 (823)
+.|.+.+.||+|.||.+.++++.. .+.+++|.+... ....++|.+|...--.| .|.|||.-+.. +...+....++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 568888999999999999999865 678999988653 33467899998754445 68999987754 556678889999
Q ss_pred cccCCCchhhccCCCc------------------ccccCHHHHHHHHhcccc--ccCCCceeceeeceeecCCCcccccc
Q 003402 602 YMVNKSLDVFLFDPTK------------------KHLLGWQLRVRIIDGIAQ--DQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~------------------~~~l~~~~r~~i~~~ia~--d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|+|.|+|.+.+..... -|..+..||+.+++||+. .+...+||+|||+.+..+.. .
T Consensus 103 ~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t-----V 177 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT-----V 177 (378)
T ss_pred cCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce-----e
Confidence 9999999888754321 145667788888999886 44558999999999865332 1
Q ss_pred ccccccccccccccccC---CC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 662 KRIVGTYGYMSPEYALE---GV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~---~~--~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
....-+..|.+||.... +. ..+.+|||.|||+++.++||+.|+.....+.... +.|..|..+....+ |..-
T Consensus 178 ~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y--~~~~~w~~rk~~~~--P~~F 253 (378)
T KOG1345|consen 178 KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPY--WEWEQWLKRKNPAL--PKKF 253 (378)
T ss_pred hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchH--HHHHHHhcccCccC--chhh
Confidence 22334678999997643 33 3678999999999999999999986332222222 22333333322211 1111
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
. ...+++.++-.+-+..+|++|--..++.+|.
T Consensus 254 ~----~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 254 N----PFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred c----ccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 1 2234556666778889999997666666553
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-15 Score=167.01 Aligned_cols=153 Identities=15% Similarity=0.145 Sum_probs=111.9
Q ss_pred HhcCcceeeeeccccceeEEeeeec--CCcEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCceee-EEeEEEeCC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL--NGQEVAVKRLSNQ-----SGQGLKEFKNEMMLIAKLQHRNLVR-LLGCCIEQG 594 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~~VAVK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~Niv~-l~g~~~~~~ 594 (823)
.-++|.+.++||+|+||+||+|... +++.||||++... .....+.|.+|++++.+++|+|+|. ++. .+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TG 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cC
Confidence 3467999999999999999999865 4778899987532 1223567999999999999999995 443 25
Q ss_pred eEEEEEEcccCCCchhhccCCCc------------ccccCHHHHHH-HHhccccccCCCceeceeeceeecCCCccc---
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK------------KHLLGWQLRVR-IIDGIAQDQHMNPKISDFGMARMFGGDELQ--- 658 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~------------~~~l~~~~r~~-i~~~ia~d~~~~~KI~DFGla~~~~~~~~~--- 658 (823)
..+|||||+++++|......... .|..++.||+. +..||+.+.++.+||+|||+|+.+......
T Consensus 92 ~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~ 171 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRI 171 (365)
T ss_pred CcEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhh
Confidence 68999999999999632111000 13344555666 677888888889999999999987543321
Q ss_pred ---cccccccccccccccccccCC
Q 003402 659 ---GNTKRIVGTYGYMSPEYALEG 679 (823)
Q Consensus 659 ---~~~~~~~Gt~~YmAPE~~~~~ 679 (823)
.......+++.|+|||.+...
T Consensus 172 ~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 172 AAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred hhhhhhhhhhccCccCCcccCChh
Confidence 122457889999999998644
|
|
| >PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-15 Score=124.10 Aligned_cols=66 Identities=56% Similarity=1.191 Sum_probs=58.1
Q ss_pred CCCCCceeeecccCCCCccceeeccccChHHHHHHHhccCCceeeecccccCCCcceeecccccccc
Q 003402 347 CKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDL 413 (823)
Q Consensus 347 C~~~~~f~~~~~~~~p~~~~~~~~~~~sl~~C~~~CL~nCsC~A~~~~~~~~~g~gC~~w~~~l~~~ 413 (823)
|+.+|+|.++++|++|++....++.++++++|++.||+||||+||+|.++. ++++|++|+++|+|+
T Consensus 1 C~~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~-~~~~C~lW~~~L~d~ 66 (66)
T PF08276_consen 1 CGSGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLS-GGGGCLLWYGDLVDL 66 (66)
T ss_pred CcCCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccC-CCCEEEEEcCEeecC
Confidence 545799999999999999777766779999999999999999999998655 567899999999874
|
These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.5e-14 Score=151.44 Aligned_cols=238 Identities=26% Similarity=0.323 Sum_probs=169.4
Q ss_pred cceeeeeccccceeEEeeeecCCcEEEEEEeccCChh---hHHHHHHHHHHHHhcCCC-ceeeEEeEEEeCCeEEEEEEc
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ---GLKEFKNEMMLIAKLQHR-NLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~---~~~~f~~Ev~~l~~l~H~-Niv~l~g~~~~~~~~~lV~Ey 602 (823)
|.+.+.||.|+||.||++... ..+|+|.+...... ....|.+|+.+++.+.|+ +++++..++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 567789999999999999886 78999999754332 367899999999999988 799999999877788999999
Q ss_pred ccCCCchhhccCCC----c------------------ccccCHHHHHHHHhccccccCC-CceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPT----K------------------KHLLGWQLRVRIIDGIAQDQHM-NPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~----~------------------~~~l~~~~r~~i~~~ia~d~~~-~~KI~DFGla~~~~~~~~~~ 659 (823)
+.++++..++.... . .|...+.||+....++..+... .+|++|||+++.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS 159 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence 99999996665432 1 1223344555556666667777 69999999998665443221
Q ss_pred ----ccccccccccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC--ccchhHHHHhhccCCccccc
Q 003402 660 ----NTKRIVGTYGYMSPEYALE---GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD--SFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 660 ----~~~~~~Gt~~YmAPE~~~~---~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~l 730 (823)
......||..|+|||.+.. ..++...|+||+|++++++++|..|+...... .............. .
T Consensus 160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~ 234 (384)
T COG0515 160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-----S 234 (384)
T ss_pred cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-----c
Confidence 2356789999999999987 57899999999999999999999995433321 11111111111110 0
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
................+.+++..|+..+|..|.++.+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000002223567788888999999999999987663
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-14 Score=159.64 Aligned_cols=194 Identities=22% Similarity=0.324 Sum_probs=130.7
Q ss_pred HHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHH----HHhccc----------------
Q 003402 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----IIDGIA---------------- 634 (823)
Q Consensus 575 l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----i~~~ia---------------- 634 (823)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.... ..++|..... ++.|++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 356899999999999999999999999999999999997632 2344443332 233332
Q ss_pred ---cccCCCceeceeeceeecCCCccccccccccccccccccccccCCC-------CCchhhHHHHHHHHHHHHhCCCCC
Q 003402 635 ---QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-------FSVKSDVFSFGVLMLEILSSKKNT 704 (823)
Q Consensus 635 ---~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~-------~s~ksDVwSfGvvl~Elltg~~p~ 704 (823)
.|..+.+||+|||+.................-..-|.|||.+.... .+.+.||||||++++||++++.|+
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 2778889999999998764311111111122345699999997642 467899999999999999999998
Q ss_pred CCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 705 GVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 705 ~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+........ ...+....+ .......|.+.... +....+..++..||.++|++||++.+|-..++..
T Consensus 159 ~~~~~~~~~-~eii~~~~~--~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 159 DLRNLVEDP-DEIILRVKK--GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred ccccccCCh-HHHHHHHHh--cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 764433221 111111111 12222333322111 2233688899999999999999999998877654
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.6e-12 Score=140.81 Aligned_cols=239 Identities=20% Similarity=0.223 Sum_probs=162.4
Q ss_pred CcceeeeeccccceeEEeeeecCC--cEEEEEEeccCChhhHHHHHHHHHHHHhcCC----CceeeEEeEE-EeCCeEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLNG--QEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH----RNLVRLLGCC-IEQGEKIL 598 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~~--~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H----~Niv~l~g~~-~~~~~~~l 598 (823)
+|.+.++||+|+||.||++..... ..+|+|.-..........+..|+.++..+.+ +++.++++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999987653 4788887765433322378889999998873 5788888888 47788999
Q ss_pred EEEcccCCCchhhccCCC-c--------------------ccccCHHHHHHHHhccccccC-----CCceeceeecee--
Q 003402 599 IYEYMVNKSLDVFLFDPT-K--------------------KHLLGWQLRVRIIDGIAQDQH-----MNPKISDFGMAR-- 650 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~-~--------------------~~~l~~~~r~~i~~~ia~d~~-----~~~KI~DFGla~-- 650 (823)
||+.. +.+|.++..... . .|..++.||+..+.|++.... ..+.|.|||+|+
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 99887 678877653222 1 144566777777777776543 568999999998
Q ss_pred ecCCCc----ccc-c-cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 651 MFGGDE----LQG-N-TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 651 ~~~~~~----~~~-~-~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
....+. ... . ....+||.+|++++...+...+.+.|+||++-++.|++.|..|+........ .......
T Consensus 178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~--~~~~~~~--- 252 (322)
T KOG1164|consen 178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL--KSKFEKD--- 252 (322)
T ss_pred cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch--HHHHHHH---
Confidence 332221 111 1 2346799999999999999999999999999999999999988743222110 0000000
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
........ ........+.++...+-..+..++|....+...|....
T Consensus 253 -~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 253 -PRKLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred -hhhhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 00111111 11112234444555555579999999999998876653
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-13 Score=140.72 Aligned_cols=160 Identities=13% Similarity=0.094 Sum_probs=114.8
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhH---HH------HHHHHHHHHhcCCCceeeEEeEEEeC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGL---KE------FKNEMMLIAKLQHRNLVRLLGCCIEQ 593 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~---~~------f~~Ev~~l~~l~H~Niv~l~g~~~~~ 593 (823)
-.++|+..+.||+|+||.||.... ++..+|||.+........ +. |.+|+..+.+++|++|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357899999999999999999755 577899999975422221 22 68999999999999999999886643
Q ss_pred --------CeEEEEEEcccCCCchhhccCCCc-----------ccccCHHHHHHHHhccccccCCCceeceeeceeecCC
Q 003402 594 --------GEKILIYEYMVNKSLDVFLFDPTK-----------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 594 --------~~~~lV~Ey~~~gsL~~~l~~~~~-----------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
...+|||||+++.+|.++...... .|..++.|++..+.|+..+.++ ++|+|||..+....
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e 186 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQ 186 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccc
Confidence 358899999999999776421110 1223344444455566667777 99999998876532
Q ss_pred CccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHH
Q 003402 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ell 698 (823)
+... ..++....|..++||||||+.+.-..
T Consensus 187 ~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 187 RKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred hhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 2111 11445566778999999999987664
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.6e-14 Score=164.89 Aligned_cols=235 Identities=18% Similarity=0.222 Sum_probs=156.7
Q ss_pred eeeeeccccceeEEeeeecC-CcEEEEEEec----cC-Chh-hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 529 IQSKLGEGGFGPVYKGRLLN-GQEVAVKRLS----NQ-SGQ-GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~----~~-~~~-~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
..+.+|.|++|.|+...... ....+.|... .. ... ....+..|+.+-..++|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 34789999999777765432 3333333322 11 111 11226678888889999999888887777766666799
Q ss_pred cccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc--ccc
Q 003402 602 YMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL--QGN 660 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~--~~~ 660 (823)
|+++ +|..++..... .|..+..||+...+++....++.+||+|||.+....-... ...
T Consensus 402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~ 480 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHE 480 (601)
T ss_pred cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhh
Confidence 9999 98887755311 1334455566666667778889999999999987643221 234
Q ss_pred cccccccccccccccccCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFS-VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s-~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
...++|+..|+|||.+....|. ...||||.||++..|++|+.|+-........+....+ .+.. .+... ....
T Consensus 481 ~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~----~~~~-~~~~~--~~~~ 553 (601)
T KOG0590|consen 481 SSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY----SDQR-NIFEG--PNRL 553 (601)
T ss_pred hcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc----cccc-ccccC--hHHH
Confidence 4568999999999999999996 5689999999999999999987544333221100000 0000 00000 0011
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+...++..+++.||.+|-||.+|++.
T Consensus 554 ~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 554 LSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 12334567788999999999999999999874
|
|
| >cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins | Back alignment and domain information |
|---|
Probab=99.30 E-value=3e-12 Score=108.45 Aligned_cols=71 Identities=24% Similarity=0.397 Sum_probs=60.3
Q ss_pred CCCCCceeeecccCCCCccceeeccccChHHHHHHHhc---cCCceeeecccccCCCcceeeccccc-cccccCCCCCCC
Q 003402 347 CKSGDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLK---NCSCRAYANSKVTDGGSGCLMWFGDL-IDLKKTDNHTNG 422 (823)
Q Consensus 347 C~~~~~f~~~~~~~~p~~~~~~~~~~~sl~~C~~~CL~---nCsC~A~~~~~~~~~g~gC~~w~~~l-~~~~~~~~~~~~ 422 (823)
|...++|.++.++++|++.. +++++|++.|++ ||||+||+|.+. ++||.+|.++| .|++... ..|
T Consensus 5 ~~~~g~fl~~~~~klpd~~~------~s~~eC~~~Cl~~~~nCsC~Aya~~~~---~~gC~~W~~~l~~d~~~~~--~~g 73 (80)
T cd00129 5 CKSAGTTLIKIALKIKTTKA------NTADECANRCEKNGLPFSCKAFVFAKA---RKQCLWFPFNSMSGVRKEF--SHG 73 (80)
T ss_pred eecCCeEEEeecccCCcccc------cCHHHHHHHHhcCCCCCCceeeeccCC---CCCeEEecCcchhhHHhcc--CCC
Confidence 34467899999999998754 589999999999 999999999752 45899999999 9998776 568
Q ss_pred eeEEee
Q 003402 423 VSIYIR 428 (823)
Q Consensus 423 ~~~yvr 428 (823)
.++|+|
T Consensus 74 ~~Ly~r 79 (80)
T cd00129 74 FDLYEN 79 (80)
T ss_pred ceeEeE
Confidence 899997
|
Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.4e-13 Score=150.65 Aligned_cols=167 Identities=26% Similarity=0.348 Sum_probs=132.8
Q ss_pred eeccccceeEEeeee----cCCcEEEEEEeccCChh--hHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEEccc
Q 003402 532 KLGEGGFGPVYKGRL----LNGQEVAVKRLSNQSGQ--GLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 532 ~LG~G~fG~Vy~g~~----~~~~~VAVK~l~~~~~~--~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.+|+|.||.|+..+- +.++.+|.|.+.+.... .......|..++..++ ||.+|++.-.+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 479999999998743 23677888888754321 1125667888999997 9999999999999999999999999
Q ss_pred CCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 605 NKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 605 ~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
+|.|...+..... .|.+...+|+.+..||..|.+|.+|+.|||++|..-..+. .+
T Consensus 81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~------~c 154 (612)
T KOG0603|consen 81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI------AC 154 (612)
T ss_pred cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh------cc
Confidence 9998776643321 2445566677677899999999999999999997543322 28
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
||..|||||++. .....+|-||||++++||+||..|+..
T Consensus 155 gt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 155 GTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred cchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 999999999988 567889999999999999999999853
|
|
| >cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.6e-12 Score=108.37 Aligned_cols=80 Identities=41% Similarity=0.887 Sum_probs=64.3
Q ss_pred CCCCCCC---CceeeecccCCCCccceeeccccChHHHHHHHhccCCceeeecccccCCCcceeeccccccccccCCCCC
Q 003402 344 SSDCKSG---DRFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGDLIDLKKTDNHT 420 (823)
Q Consensus 344 ~l~C~~~---~~f~~~~~~~~p~~~~~~~~~~~sl~~C~~~CL~nCsC~A~~~~~~~~~g~gC~~w~~~l~~~~~~~~~~ 420 (823)
+++|... +.|.++.++++|+..... .++++++|++.||+||+|+||+|.+ ++.+|++|.+.+.+.+... .
T Consensus 2 ~~~C~~~~~~~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~~---~~~~C~~~~~~~~~~~~~~--~ 74 (84)
T cd01098 2 PLNCGGDGSTDGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNN---GSGGCLLWNGLLNNLRSLS--S 74 (84)
T ss_pred CcccCCCCCCCEEEEeCCeeCCCchhhh--ccCCHHHHHHHHhcCCCcceeeecC---CCCeEEEEeceecceEeec--C
Confidence 4567643 689999999999875543 6789999999999999999999864 3557999999998876543 3
Q ss_pred CCeeEEeecC
Q 003402 421 NGVSIYIRVP 430 (823)
Q Consensus 421 ~~~~~yvrv~ 430 (823)
.+.++|||++
T Consensus 75 ~~~~~yiKv~ 84 (84)
T cd01098 75 GGGTLYLRLA 84 (84)
T ss_pred CCcEEEEEeC
Confidence 4678999975
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.4e-12 Score=139.27 Aligned_cols=222 Identities=18% Similarity=0.164 Sum_probs=131.0
Q ss_pred eeeeeccccceeEEeeeecCC----cEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEE------eEEEe-----
Q 003402 529 IQSKLGEGGFGPVYKGRLLNG----QEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLL------GCCIE----- 592 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~----~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~------g~~~~----- 592 (823)
+.+..+..+++.+..+....+ ..++.|+.............+++..+... +|++.+..- ....+
T Consensus 248 ~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~ 327 (516)
T KOG1033|consen 248 ISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGK 327 (516)
T ss_pred ccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccccc
Confidence 346677777777777654432 23445554443322233334445444444 444433321 01111
Q ss_pred CCeEEEEEEcccCCCchhhccCCCcccccCHHHHHH-------------------HHhccccccCCCceeceeeceeecC
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR-------------------IIDGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~-------------------i~~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
....++.|++|...+|.++|..+.......+.+... .+.+|.-..+..+||.|||+.....
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~ 407 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQD 407 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecc
Confidence 235789999999999999997554433333333333 3334443455579999999998765
Q ss_pred CCc----cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 654 GDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 654 ~~~----~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
... .....+..+||..||+||.+.+..|+.|+||||+|++|+|+++ -...+. . .....
T Consensus 408 ~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e--------------r---~~t~~ 470 (516)
T KOG1033|consen 408 KDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE--------------R---IATLT 470 (516)
T ss_pred cCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH--------------H---HHhhh
Confidence 554 1223445789999999999999999999999999999999986 221110 0 00111
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHH
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~ev 768 (823)
++-|..+...+-. .-+.-..+..+.+...|.+||++.++
T Consensus 471 d~r~g~ip~~~~~-d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 471 DIRDGIIPPEFLQ-DYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhhcCCCChHHhh-cCcHHHHHHHHhcCCCcccCchHHHH
Confidence 2222221111100 11123457788999999999955543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.7e-11 Score=122.87 Aligned_cols=179 Identities=22% Similarity=0.274 Sum_probs=130.8
Q ss_pred cCcceeeeeccccceeEEeee-ecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~-~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
-+|.+.++||+|.||..+.|+ +-++++||||.=...+ ..-++..|.+..+.|. .+.|-..+=|-.++.+..||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 468899999999999999997 5679999999754332 2245677777777774 58898888888888999999998
Q ss_pred ccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccc-----cCCCceeceeeceeecCCCcc
Q 003402 603 MVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQD-----QHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d-----~~~~~KI~DFGla~~~~~~~~ 657 (823)
+ +-||.+++.-..+. |..+...|+.+++|.+.. ....+.|.||||||......+
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 8 67887765211111 112222233333444432 233478999999997644332
Q ss_pred -----ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 658 -----QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 658 -----~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
.+..+...||.+||+---..+.+-+..-|.=|+|-++...+-|..|+..
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 2334567899999999888888999999999999999999999999754
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.1e-11 Score=118.18 Aligned_cols=180 Identities=21% Similarity=0.242 Sum_probs=133.0
Q ss_pred hcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCC-CceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH-RNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H-~Niv~l~g~~~~~~~~~lV~E 601 (823)
...|.+.++||.|+||.+|.|.. .+|..||||.=+.. ....++..|.++...++| ..|..+..+..+.....||||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 36799999999999999999974 56999999986543 223567889999999986 677778888889999999999
Q ss_pred cccCCCchhhccCCCc--------------------ccccCHHHHHHHHhccccc---cCCCceeceeeceeecCCCcc-
Q 003402 602 YMVNKSLDVFLFDPTK--------------------KHLLGWQLRVRIIDGIAQD---QHMNPKISDFGMARMFGGDEL- 657 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~--------------------~~~l~~~~r~~i~~~ia~d---~~~~~KI~DFGla~~~~~~~~- 657 (823)
.. +.||.+++.-..+ .|...+.||+.+++|.+-. ....+-+.||||||......+
T Consensus 92 LL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred cc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 87 6677766522111 1333445555555555432 223467999999987643322
Q ss_pred ----ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 658 ----QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 658 ----~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
.+......||.+|.+--...+..-+..-|+=|+|-+|...--|..|+..
T Consensus 171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 2234457899999998777777778899999999999999999998743
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=3e-10 Score=114.06 Aligned_cols=171 Identities=13% Similarity=0.064 Sum_probs=119.2
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEEeccCCh----hhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEEcc
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG----QGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~----~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
....|++|+||+||.+.- .+..++.+.+..... -....|.+|+++|.+++ |+++.+++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999997765 677888888765422 11225889999999995 5889999886 4569999999
Q ss_pred cCCCchhhccCCCc------------ccccCHHHHHH-HHhccccccCCCceeceeeceeecCCCcc------ccc----
Q 003402 604 VNKSLDVFLFDPTK------------KHLLGWQLRVR-IIDGIAQDQHMNPKISDFGMARMFGGDEL------QGN---- 660 (823)
Q Consensus 604 ~~gsL~~~l~~~~~------------~~~l~~~~r~~-i~~~ia~d~~~~~KI~DFGla~~~~~~~~------~~~---- 660 (823)
.+.+|...+..... .|..++.|++. ...||+.+.++.++|+|||+|+....... ...
T Consensus 81 ~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~l 160 (218)
T PRK12274 81 AGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHL 160 (218)
T ss_pred cCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHH
Confidence 99998765421110 12233444554 35677778888999999999986543221 000
Q ss_pred -cccccccccccccccccCC-CCC-chhhHHHHHHHHHHHHhCCCCC
Q 003402 661 -TKRIVGTYGYMSPEYALEG-VFS-VKSDVFSFGVLMLEILSSKKNT 704 (823)
Q Consensus 661 -~~~~~Gt~~YmAPE~~~~~-~~s-~ksDVwSfGvvl~Elltg~~p~ 704 (823)
......++.|++|+...-. ..+ ...+-++-|.-+|.++||+-+.
T Consensus 161 lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 161 LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 1112467888888754332 334 5678899999999999998764
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.5e-10 Score=116.78 Aligned_cols=120 Identities=14% Similarity=0.054 Sum_probs=78.4
Q ss_pred eeeeccccceeEEeeeecCCcEEEEEEeccCCh--hh-------HHHH-----------------HHHHHHHHhcCCCce
Q 003402 530 QSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG--QG-------LKEF-----------------KNEMMLIAKLQHRNL 583 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~--~~-------~~~f-----------------~~Ev~~l~~l~H~Ni 583 (823)
...||+|+||.||+|...+|+.||||.++.... .. ...| ..|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 368999999999999988899999999865321 01 1122 349999999988776
Q ss_pred eeEEeEEEeCCeEEEEEEcccCCCchhhc-cCCCcc-------------------cccCHHHHHHHHhccccccCCCcee
Q 003402 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFL-FDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKI 643 (823)
Q Consensus 584 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l-~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI 643 (823)
.....+. ....+|||||++++++...+ ...... |..+..|++..+.||..+ ++.+||
T Consensus 82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~L 158 (190)
T cd05147 82 PCPEPIL--LKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYI 158 (190)
T ss_pred CCCcEEE--ecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEE
Confidence 4433222 22348999999988775442 211100 112233334444555555 468999
Q ss_pred ceeeceeec
Q 003402 644 SDFGMARMF 652 (823)
Q Consensus 644 ~DFGla~~~ 652 (823)
+|||+|...
T Consensus 159 iDFG~a~~~ 167 (190)
T cd05147 159 IDVSQSVEH 167 (190)
T ss_pred EEccccccC
Confidence 999999854
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.5e-10 Score=115.27 Aligned_cols=122 Identities=17% Similarity=0.130 Sum_probs=83.6
Q ss_pred eeeeccccceeEEeeeecCCcEEEEEEeccCChh---------------------h-----HHHHHHHHHHHHhcCCCce
Q 003402 530 QSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ---------------------G-----LKEFKNEMMLIAKLQHRNL 583 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~---------------------~-----~~~f~~Ev~~l~~l~H~Ni 583 (823)
...||+|+||.||+|+..+|+.||||.++..... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999998754210 0 1234679999999999987
Q ss_pred eeEEeEEEeCCeEEEEEEcccCCCchhh-ccCCCcc------------------cc-cCHHHHHHHHhccccccCCCcee
Q 003402 584 VRLLGCCIEQGEKILIYEYMVNKSLDVF-LFDPTKK------------------HL-LGWQLRVRIIDGIAQDQHMNPKI 643 (823)
Q Consensus 584 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~-l~~~~~~------------------~~-l~~~~r~~i~~~ia~d~~~~~KI 643 (823)
.....+... ..+|||||++++++... +...... |. .++.|++..+.||..+ ++.++|
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~l 158 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYI 158 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEE
Confidence 554444333 34899999998865433 3211110 11 3334444455566666 788999
Q ss_pred ceeeceeecCC
Q 003402 644 SDFGMARMFGG 654 (823)
Q Consensus 644 ~DFGla~~~~~ 654 (823)
+|||+|+.+..
T Consensus 159 iDFG~a~~~~~ 169 (190)
T cd05145 159 IDVSQAVELDH 169 (190)
T ss_pred EEcccceecCC
Confidence 99999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.8e-11 Score=140.60 Aligned_cols=233 Identities=18% Similarity=0.178 Sum_probs=144.3
Q ss_pred CcceeeeeccccceeEEeeeecCCcEEEEEEeccCC-hhhHHHHHHHHHH--HHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS-GQGLKEFKNEMML--IAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~--l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++...+.||.+.|=+|.+|+.++|. |+||.+-+.. ...++.|.++++- ...++|||.+.+.-.-....-.|||=+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4666799999999999999998887 8999886554 3345556554433 5556999999988776666667777777
Q ss_pred ccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeec--CCCcccc--
Q 003402 603 MVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMF--GGDELQG-- 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~--~~~~~~~-- 659 (823)
..+ +|.+.|..+.- .|.++..|.+.+.+||+...-.-+-|+||---|.. ..+.-..
T Consensus 103 vkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~ 181 (1431)
T KOG1240|consen 103 VKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFT 181 (1431)
T ss_pred Hhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccce
Confidence 744 55555432211 12333344444445555555555779999765532 1111000
Q ss_pred -ccccccccccccccccccCC-----------CCCchhhHHHHHHHHHHHHhC-CCCCCCCCCCccchhHHHHhhccCCc
Q 003402 660 -NTKRIVGTYGYMSPEYALEG-----------VFSVKSDVFSFGVLMLEILSS-KKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 660 -~~~~~~Gt~~YmAPE~~~~~-----------~~s~ksDVwSfGvvl~Elltg-~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
-..+...-..|+|||-+... ..+++-||+|.||++.||++. +++|... +++.+ +-.....
T Consensus 182 fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aY--r~~~~~~ 254 (1431)
T KOG1240|consen 182 FFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAY--RSGNADD 254 (1431)
T ss_pred EEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhH--hccCccC
Confidence 00111223469999977531 267889999999999999995 5555311 22221 1110111
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+. .++.- +...+.++++.|+|.||++|-++.+.++.-.+.
T Consensus 255 ~e~----~Le~I----ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 255 PEQ----LLEKI----EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred HHH----HHHhC----cCccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 111 11111 112567899999999999999999999976554
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=8e-10 Score=112.74 Aligned_cols=120 Identities=18% Similarity=0.111 Sum_probs=82.8
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-----CCCceeeEEeEEEeCC---e-EEEE
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-----QHRNLVRLLGCCIEQG---E-KILI 599 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-----~H~Niv~l~g~~~~~~---~-~~lV 599 (823)
-.+.||+|+||.||. ++.....+||++........+++.+|+.++..+ .||||++++|++.++. . ..+|
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 347899999999996 433233379988765444567899999999999 5799999999998863 4 3478
Q ss_pred EEc--ccCCCchhhccCCCcc-----------------cccCHHHHHHHHhccccc----cCCCceeceeecee
Q 003402 600 YEY--MVNKSLDVFLFDPTKK-----------------HLLGWQLRVRIIDGIAQD----QHMNPKISDFGMAR 650 (823)
Q Consensus 600 ~Ey--~~~gsL~~~l~~~~~~-----------------~~l~~~~r~~i~~~ia~d----~~~~~KI~DFGla~ 650 (823)
+|| ++.|+|.+++...... |.....||+..+.||..+ .+..++|+||+.++
T Consensus 84 ~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred ecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 999 6689999999643211 111222333344555554 34579999954443
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.9e-09 Score=111.49 Aligned_cols=211 Identities=17% Similarity=0.214 Sum_probs=120.4
Q ss_pred CcceeeeeccccceeEEeeeecC-CcEEEEEEecc---CChhhHHHHHHHHHHHHhcCC----------CceeeEEeEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSN---QSGQGLKEFKNEMMLIAKLQH----------RNLVRLLGCCI 591 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~---~~~~~~~~f~~Ev~~l~~l~H----------~Niv~l~g~~~ 591 (823)
.+...+.||.|+|+.||.++... ++++|||.... ......+++++|.-.+..+.+ -.++--++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45567899999999999999865 89999998742 233457788888876666433 12222222221
Q ss_pred ---------eCC--------eEEEEEEcccCCCchhhcc---CCCcc-cccCHHHHHHH----H----------------
Q 003402 592 ---------EQG--------EKILIYEYMVNKSLDVFLF---DPTKK-HLLGWQLRVRI----I---------------- 630 (823)
Q Consensus 592 ---------~~~--------~~~lV~Ey~~~gsL~~~l~---~~~~~-~~l~~~~r~~i----~---------------- 630 (823)
... ..+++|+-+ .++|..++. ..... ..+....|..+ +
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 111 235667766 567766642 11111 11112222111 1
Q ss_pred --hccccccCCCceeceeeceeecCCCccccccccccccccccccccccC--------CCCCchhhHHHHHHHHHHHHhC
Q 003402 631 --DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE--------GVFSVKSDVFSFGVLMLEILSS 700 (823)
Q Consensus 631 --~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~--------~~~s~ksDVwSfGvvl~Elltg 700 (823)
.++..+.++.++|+||+-....+.... . ...+..|.+||.... -.++.+.|.|++|+++|.|.++
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYR-C----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEE-G----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceee-c----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 233347899999999988776432111 1 234578999997643 2578999999999999999999
Q ss_pred CCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCC
Q 003402 701 KKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDR 762 (823)
Q Consensus 701 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~R 762 (823)
+.|++........ +... ..+. +..+.+..++...++.||++|
T Consensus 247 ~lPf~~~~~~~~~------------------~~~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADP------------------EWDF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTS------------------GGGG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccc------------------cccc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9998754322110 0011 1233 667778889999999999988
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.6e-10 Score=132.59 Aligned_cols=211 Identities=18% Similarity=0.196 Sum_probs=126.6
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
..+|..++.|-.|+||.||..++.. .+..|.| +++..- +.+. ++.....|.+| |-|... +.-
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----ilRn--ilt~a~npfvv---gDc~tl------lk~ 144 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----ILRN--ILTFAGNPFVV---GDCATL------LKN 144 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-----hhhc--cccccCCccee---chhhhh------ccc
Confidence 4678999999999999999998865 5678884 333210 1110 22222344443 222110 000
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHHhccccccCCCceeceeeceeecCCCc-------------ccccccccccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE-------------LQGNTKRIVGTYG 669 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~-------------~~~~~~~~~Gt~~ 669 (823)
+..--++- +......|..+..||..+..++....-+.+|+.||||++...... .+-..+.++||+.
T Consensus 145 ~g~lPvdm-vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPe 223 (1205)
T KOG0606|consen 145 IGPLPVDM-VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPE 223 (1205)
T ss_pred CCCCcchh-hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCcc
Confidence 00000000 011112244556677777788888888999999999998642111 1112345799999
Q ss_pred ccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHH
Q 003402 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYIN 749 (823)
Q Consensus 670 YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~ 749 (823)
|+|||++...-|...+|.|++|+|+||.+-|+-||+.... ..++..+.... +.-.+-+.....+...
T Consensus 224 yiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp--eelfg~visd~-----------i~wpE~dea~p~Ea~d 290 (1205)
T KOG0606|consen 224 YIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--EELFGQVISDD-----------IEWPEEDEALPPEAQD 290 (1205)
T ss_pred ccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH--HHHHhhhhhhh-----------ccccccCcCCCHHHHH
Confidence 9999999999999999999999999999999999753322 22222221110 0000111222345666
Q ss_pred HHHHccccCcCCCCCH
Q 003402 750 VALLCVQENAEDRPTM 765 (823)
Q Consensus 750 l~~~Cl~~dP~~RPt~ 765 (823)
++...++++|.+|---
T Consensus 291 li~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 291 LIEQLLRQNPLCRLGT 306 (1205)
T ss_pred HHHHHHHhChHhhccc
Confidence 7778889999999433
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-09 Score=109.43 Aligned_cols=132 Identities=14% Similarity=0.035 Sum_probs=90.3
Q ss_pred HHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCCh----------------------hhHHHHHHHHHHHH
Q 003402 519 SVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG----------------------QGLKEFKNEMMLIA 576 (823)
Q Consensus 519 ~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~----------------------~~~~~f~~Ev~~l~ 576 (823)
++......|.+.+.||+|+||.||++...+++.||||++..... .....+..|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 33334344777899999999999999988899999998754210 01123677999999
Q ss_pred hcCCCc--eeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCcc-------------cccCHHHHHHHHhccccccCCCc
Q 003402 577 KLQHRN--LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK-------------HLLGWQLRVRIIDGIAQDQHMNP 641 (823)
Q Consensus 577 ~l~H~N--iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-------------~~l~~~~r~~i~~~ia~d~~~~~ 641 (823)
++.|++ +...++ ....++||||+++++|.......... |..++.|++..+.||+.++++.+
T Consensus 89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~ 164 (198)
T cd05144 89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKI 164 (198)
T ss_pred HHHHcCCCCCceee----cCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcE
Confidence 998874 444444 24558999999999987765311110 12233344444556666888999
Q ss_pred eeceeeceeecCC
Q 003402 642 KISDFGMARMFGG 654 (823)
Q Consensus 642 KI~DFGla~~~~~ 654 (823)
||+|||++..+..
T Consensus 165 ~liDfg~~~~~~~ 177 (198)
T cd05144 165 YIIDWPQMVSTDH 177 (198)
T ss_pred EEEECCccccCCC
Confidence 9999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=2e-09 Score=126.20 Aligned_cols=126 Identities=17% Similarity=0.203 Sum_probs=93.5
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEE-eccC-C------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKR-LSNQ-S------GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~-l~~~-~------~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
..|...++||+|+||.||+|.+.... +++|+ +.+. . ....+++.+|++++.+++|++++....++.+....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34456689999999999999885543 34443 2211 1 11235689999999999999999988888888888
Q ss_pred EEEEEcccCCCchhhccCC-----------CcccccCHHHHHHHHhccccccCCCceeceeeceeec
Q 003402 597 ILIYEYMVNKSLDVFLFDP-----------TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~-----------~~~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
++||||+++++|.+++... ...|...+.|++..+.||.. .+..++|+|||+++..
T Consensus 412 ~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999999877411 01134455666777778877 5778999999999863
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.8e-10 Score=132.27 Aligned_cols=235 Identities=17% Similarity=0.190 Sum_probs=162.3
Q ss_pred cCcceeeeeccccceeEEeeeecC--CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~--~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV 599 (823)
..|.+.+.||+|+|+.|-...... ...+|+|.+.... ....+....|..+-..+. |+|++++++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 346666789999999998876533 4567888776442 223344556888888887 99999999999999999999
Q ss_pred EEcccCCCchhhccCCCc-c--------------------c-ccCHHHHHHHHhccccccCC-CceeceeeceeecCC-C
Q 003402 600 YEYMVNKSLDVFLFDPTK-K--------------------H-LLGWQLRVRIIDGIAQDQHM-NPKISDFGMARMFGG-D 655 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~-~--------------------~-~l~~~~r~~i~~~ia~d~~~-~~KI~DFGla~~~~~-~ 655 (823)
.||..++++...+..... . | .....|+...+.+...+..+ ..|++|||+|..... +
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~ 179 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN 179 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence 999999999887721111 0 1 11234455555666667778 999999999988766 5
Q ss_pred ccccccccccc-cccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 656 ELQGNTKRIVG-TYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 656 ~~~~~~~~~~G-t~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
.........+| ++.|+|||...+.. .....|+||.|+++.-+++|..|.............|. ..+.. .
T Consensus 180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~-----~~~~~--~-- 250 (601)
T KOG0590|consen 180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK-----SNKGR--F-- 250 (601)
T ss_pred CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec-----ccccc--c--
Confidence 55555556788 99999999988854 46889999999999999999999765433322111111 11000 0
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.............++...++..+|..|.+.+++..
T Consensus 251 --~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 251 --TQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred --ccCccccCChhhhhcccccccCCchhccccccccc
Confidence 00011112234455666788889999999988754
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.1e-09 Score=108.88 Aligned_cols=119 Identities=13% Similarity=0.166 Sum_probs=85.9
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG--------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~--------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+.||+|++|.||+|.. .+..|+||....... .....+.+|+.++..++|+++.....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 6799999999999987 677899997653221 1124688999999999999998888888888889999999
Q ss_pred ccCCCchhhccCCCc---------------ccccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 603 MVNKSLDVFLFDPTK---------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~---------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
+++++|.+++..... .|..++.|++....||+.+ +..++|+|||+++.
T Consensus 81 ~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999988754221 0111112222223344445 67789999999874
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-09 Score=107.58 Aligned_cols=118 Identities=17% Similarity=0.231 Sum_probs=84.5
Q ss_pred eeccccceeEEeeeecCCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG--------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 532 ~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~--------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.||+|+||.||+|.+ ++..|++|....... ...+++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 678899998653211 12356789999999999988766666666777789999999
Q ss_pred cCCCchhhccCCCc------------ccccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 604 VNKSLDVFLFDPTK------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 604 ~~gsL~~~l~~~~~------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
++++|.+++..... .|..++.|++..+.|++.+ ++.+++.|||+++.
T Consensus 80 ~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999887754221 0112222333334455556 78899999999875
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.4e-08 Score=106.02 Aligned_cols=124 Identities=15% Similarity=0.051 Sum_probs=81.8
Q ss_pred cCcceeeeeccccceeEEeee--ecCCcEEEEEEeccCChh------------------------hHHHHHHHHHHHHhc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGR--LLNGQEVAVKRLSNQSGQ------------------------GLKEFKNEMMLIAKL 578 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~--~~~~~~VAVK~l~~~~~~------------------------~~~~f~~Ev~~l~~l 578 (823)
..|++.+.||+|+||.||+|. ..+|+.||||.++..... ....+..|+.++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999998 567999999998643210 012357899999999
Q ss_pred CCCc--eeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCc-c------------------cccC-HHHHHHHHhccccc
Q 003402 579 QHRN--LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK-K------------------HLLG-WQLRVRIIDGIAQD 636 (823)
Q Consensus 579 ~H~N--iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-~------------------~~l~-~~~r~~i~~~ia~d 636 (823)
.|.. +.+++++ ...++||||+++++|......... . |..+ ..|++..+.||..+
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 7633 3344442 235899999999888665422111 0 1111 22233333444445
Q ss_pred cCCCceeceeeceeecC
Q 003402 637 QHMNPKISDFGMARMFG 653 (823)
Q Consensus 637 ~~~~~KI~DFGla~~~~ 653 (823)
++.+||+|||+|+...
T Consensus 184 -~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 184 -DGKVVIIDVSQSVELD 199 (237)
T ss_pred -CCCEEEEEChhhhccC
Confidence 6789999999998643
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.1e-08 Score=122.82 Aligned_cols=178 Identities=20% Similarity=0.210 Sum_probs=119.2
Q ss_pred HHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC---CCceeeEEeEEEeCCeEEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ---HRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~---H~Niv~l~g~~~~~~~~~l 598 (823)
...+.|.+.+.||+|+||+||+|...+|+.||+|.=+.... =+|---.+++.+|+ -+-|..+..+..-.+.-+|
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 34467889999999999999999998899999998654321 11111122333333 1233444444555677889
Q ss_pred EEEcccCCCchhhccCCCcc-cc------------cCHHHHHHHHhcccc-------------ccCCCceeceeeceeec
Q 003402 599 IYEYMVNKSLDVFLFDPTKK-HL------------LGWQLRVRIIDGIAQ-------------DQHMNPKISDFGMARMF 652 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~-~~------------l~~~~r~~i~~~ia~-------------d~~~~~KI~DFGla~~~ 652 (823)
|+||.+.|+|.+++.....- +. +.-.|+..|++|=.+ .....++|+|||-+-.+
T Consensus 772 v~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred eeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 99999999999998632211 11 111222223322111 23445899999999655
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKK 702 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~ 702 (823)
.--.........++|-++-.+|...+...+..+|-|.+..+++-|+-|+.
T Consensus 852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 32222223445688999999999999999999999999999999998864
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.3e-08 Score=104.88 Aligned_cols=179 Identities=17% Similarity=0.215 Sum_probs=106.9
Q ss_pred CCCceeeEEeEEEe---------------------------CCeEEEEEEcccCCCchhhccCCCcc-------------
Q 003402 579 QHRNLVRLLGCCIE---------------------------QGEKILIYEYMVNKSLDVFLFDPTKK------------- 618 (823)
Q Consensus 579 ~H~Niv~l~g~~~~---------------------------~~~~~lV~Ey~~~gsL~~~l~~~~~~------------- 618 (823)
+|||||++.++|.+ +...||||.-.+ .+|..++......
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLE 352 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLE 352 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHH
Confidence 59999999998853 235678877553 3677777543322
Q ss_pred -----cccCHHHHHHHHhcccc--ccCC--CceeceeeceeecCCC----ccccccccccccccccccccccC--CCC--
Q 003402 619 -----HLLGWQLRVRIIDGIAQ--DQHM--NPKISDFGMARMFGGD----ELQGNTKRIVGTYGYMSPEYALE--GVF-- 681 (823)
Q Consensus 619 -----~~l~~~~r~~i~~~ia~--d~~~--~~KI~DFGla~~~~~~----~~~~~~~~~~Gt~~YmAPE~~~~--~~~-- 681 (823)
+.++..||+.+.+||+. |++. ...|+|||.+-.-... .+....-..-|...-||||+... ++.
T Consensus 353 av~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~av 432 (598)
T KOG4158|consen 353 AVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAV 432 (598)
T ss_pred HHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCcee
Confidence 23344555555566654 3343 3578999987432110 11111122347778999998754 332
Q ss_pred --CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCc
Q 003402 682 --SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENA 759 (823)
Q Consensus 682 --s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP 759 (823)
-.|+|.|+.|.+.|||+....||........+.-.+ ++..+ |. .+..+...+.+++...++.||
T Consensus 433 vny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y-----qe~qL-----Pa----lp~~vpp~~rqlV~~lL~r~p 498 (598)
T KOG4158|consen 433 VNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY-----QESQL-----PA----LPSRVPPVARQLVFDLLKRDP 498 (598)
T ss_pred eccchhhhhhhhhhHHHHhccCCcccccchheechhhh-----hhhhC-----CC----CcccCChHHHHHHHHHhcCCc
Confidence 369999999999999999998875322211111111 11111 11 122233446678888999999
Q ss_pred CCCCCHHHHHHHH
Q 003402 760 EDRPTMSDVVSMI 772 (823)
Q Consensus 760 ~~RPt~~evl~~L 772 (823)
.+||+..-....|
T Consensus 499 skRvsp~iAANvl 511 (598)
T KOG4158|consen 499 SKRVSPNIAANVL 511 (598)
T ss_pred cccCCccHHHhHH
Confidence 9999976544433
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.56 E-value=6.4e-08 Score=108.92 Aligned_cols=228 Identities=23% Similarity=0.275 Sum_probs=148.2
Q ss_pred Ccceeeeecc--ccceeEEeeee---cCCcEEEEEEecc--CChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEE
Q 003402 526 NFSIQSKLGE--GGFGPVYKGRL---LNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 526 ~f~~~~~LG~--G~fG~Vy~g~~---~~~~~VAVK~l~~--~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~ 597 (823)
.|.+.+.+|+ |.+|.||.+.. .++..+|+|+-+. ...+....=.+|+...+++ .|+|.|+....+.+++..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3555688999 99999999987 3478899997432 2222233345677777777 4999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCc--ccccCHHHHHH----------------------HHhccccccC-CCceeceeeceeec
Q 003402 598 LIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVR----------------------IIDGIAQDQH-MNPKISDFGMARMF 652 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~r~~----------------------i~~~ia~d~~-~~~KI~DFGla~~~ 652 (823)
+-+|++. .+|..+.+.... ....-|..... .+.++....+ ...|+.|||+...+
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEc
Confidence 9999986 666666543221 11111221111 1122222344 78999999999988
Q ss_pred CCCccccc---cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccc
Q 003402 653 GGDELQGN---TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729 (823)
Q Consensus 653 ~~~~~~~~---~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 729 (823)
........ ..+..|...|++||.. .+.++.++||||+|.+..|..++-......... .|...+.
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-------~W~~~r~----- 340 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNS-------SWSQLRQ----- 340 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCC-------Ccccccc-----
Confidence 76553322 2334678899999954 667899999999999999999887664322111 0111111
Q ss_pred ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 730 l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+..++......++..+...+++.+|..|++.+.+..
T Consensus 341 ---~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 341 ---GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ---ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11222222223334445778899999999999987755
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=98.43 E-value=2e-07 Score=93.53 Aligned_cols=119 Identities=18% Similarity=0.132 Sum_probs=74.5
Q ss_pred eeeeccccceeEEeeeecCCcEEEEEEeccCChh--hHHHH----------------------HHHHHHHHhcCCCc--e
Q 003402 530 QSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ--GLKEF----------------------KNEMMLIAKLQHRN--L 583 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~--~~~~f----------------------~~Ev~~l~~l~H~N--i 583 (823)
.+.||+|+||.||+|...+++.||||.+...... ....+ ..|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999888999999988643211 11111 35666666665433 4
Q ss_pred eeEEeEEEeCCeEEEEEEcccCCC-----chhhccCCCc-------------ccc-cCHHHHHHHHhccccccCCCceec
Q 003402 584 VRLLGCCIEQGEKILIYEYMVNKS-----LDVFLFDPTK-------------KHL-LGWQLRVRIIDGIAQDQHMNPKIS 644 (823)
Q Consensus 584 v~l~g~~~~~~~~~lV~Ey~~~gs-----L~~~l~~~~~-------------~~~-l~~~~r~~i~~~ia~d~~~~~KI~ 644 (823)
.+.+++ ...++||||++++. |......... .+. ....|++..+.||..+ ++.++|+
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~li 156 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYII 156 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEE
Confidence 444443 34689999999954 3332211000 011 2333444455566666 8889999
Q ss_pred eeeceeecC
Q 003402 645 DFGMARMFG 653 (823)
Q Consensus 645 DFGla~~~~ 653 (823)
|||.+....
T Consensus 157 Dfg~a~~~~ 165 (187)
T cd05119 157 DVPQAVEID 165 (187)
T ss_pred ECccccccc
Confidence 999997653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.9e-07 Score=106.24 Aligned_cols=124 Identities=19% Similarity=0.171 Sum_probs=80.0
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCChhhH----------------------------------------HHHHH
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGL----------------------------------------KEFKN 570 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~----------------------------------------~~f~~ 570 (823)
+.||.|++|.||+|++.+|+.||||..+....... -.|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 67999999999999999999999999864311100 02556
Q ss_pred HHHHHHhc----CCCceeeEEeEEEe-CCeEEEEEEcccCCCchhhccCCCcc------------------cccCHHHHH
Q 003402 571 EMMLIAKL----QHRNLVRLLGCCIE-QGEKILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRV 627 (823)
Q Consensus 571 Ev~~l~~l----~H~Niv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~ 627 (823)
|++.+.++ +|.+-|.+-..+.+ ....+|||||+++++|.++....... +..++.|++
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D 282 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHAD 282 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCC
Confidence 66666665 24444444444432 45679999999999998875321100 001111222
Q ss_pred HHHhccccccCCCceeceeeceeecCC
Q 003402 628 RIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 628 ~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
..+.||..+.++.+++.|||+++.+..
T Consensus 283 ~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 283 LHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CCcccEEECCCCcEEEEeCCCeeECCH
Confidence 223455557788999999999987653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.3e-06 Score=83.23 Aligned_cols=120 Identities=17% Similarity=0.098 Sum_probs=86.5
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCC--CceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH--RNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H--~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
+.+.||+|.++.||++...+ ..++||....... ...+.+|+.++..++| .++.+++++....+..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35789999999999999855 7899999865433 4679999999999977 58999999888888999999999998
Q ss_pred CchhhccCCCc------------ccc---cCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 607 SLDVFLFDPTK------------KHL---LGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 607 sL~~~l~~~~~------------~~~---l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
.+..+-..... -|. ..+.|++....|+..+....+++.|||+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 87643000000 000 1122333334445556667899999998874
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=98.29 E-value=3e-06 Score=77.93 Aligned_cols=86 Identities=23% Similarity=0.301 Sum_probs=60.6
Q ss_pred EEEeeCCcEEEEeCC-CCeEEEecccCC-CCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccccccccccccc
Q 003402 106 LTVSNRGNLVLLNQS-NGTIWSSNVSRE-VKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLR 183 (823)
Q Consensus 106 L~l~~~G~LvL~d~~-g~~vWst~~~~~-~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~~ 183 (823)
+....||+||+.+.. +.+||++++... .....+.|.++|||||++.+ +.++|+| +|
T Consensus 24 ~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~-----g~~vW~S-----~t------------ 81 (114)
T smart00108 24 LIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGD-----GRVVWSS-----NT------------ 81 (114)
T ss_pred cCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCC-----CCEEEEe-----cc------------
Confidence 344578999999765 589999998643 22367899999999999873 4688986 11
Q ss_pred CCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeec
Q 003402 184 TGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCT 228 (823)
Q Consensus 184 ~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~s 228 (823)
....|.|.+.|+.+|..+++-.+ ..+.|.+
T Consensus 82 --------------~~~~~~~~~~L~ddGnlvl~~~~-~~~~W~S 111 (114)
T smart00108 82 --------------TGANGNYVLVLLDDGNLVIYDSD-GNFLWQS 111 (114)
T ss_pred --------------cCCCCceEEEEeCCCCEEEECCC-CCEEeCC
Confidence 11245678899999987664322 3467765
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.9e-06 Score=90.19 Aligned_cols=120 Identities=17% Similarity=0.158 Sum_probs=82.3
Q ss_pred eeec-cccceeEEeeeecCCcEEEEEEeccCC-------------hhhHHHHHHHHHHHHhcCCCce--eeEEeEEEeCC
Q 003402 531 SKLG-EGGFGPVYKGRLLNGQEVAVKRLSNQS-------------GQGLKEFKNEMMLIAKLQHRNL--VRLLGCCIEQG 594 (823)
Q Consensus 531 ~~LG-~G~fG~Vy~g~~~~~~~VAVK~l~~~~-------------~~~~~~f~~Ev~~l~~l~H~Ni--v~l~g~~~~~~ 594 (823)
..|| .||.|+||+.... +..++||++.... ......+.+|+.++.+++|+++ ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5688 8999999998874 6789999875321 1223467889999999998875 77777754432
Q ss_pred ----eEEEEEEcccC-CCchhhccCCCcc--------------cccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 595 ----EKILIYEYMVN-KSLDVFLFDPTKK--------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 595 ----~~~lV~Ey~~~-gsL~~~l~~~~~~--------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
..++|+||+++ .+|.+++...... |..++.|++..+.||+.+.+..++|+|||.++.
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 23599999997 6888887543211 112222333334556667777899999999875
|
|
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.3e-06 Score=76.00 Aligned_cols=83 Identities=23% Similarity=0.213 Sum_probs=59.7
Q ss_pred CCcEEEEeCC-CCeEEEecccCC-CCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccccccccccccCCCee
Q 003402 111 RGNLVLLNQS-NGTIWSSNVSRE-VKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLER 188 (823)
Q Consensus 111 ~G~LvL~d~~-g~~vWst~~~~~-~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~~~g~~~ 188 (823)
||+||+.+.. +.+||++|+... .....+.|.++|||||+|.+ +.++|+|=-
T Consensus 30 dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~-----g~~vW~S~~---------------------- 82 (116)
T cd00028 30 DYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGS-----GTVVWSSNT---------------------- 82 (116)
T ss_pred eEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCC-----CcEEEEecc----------------------
Confidence 8999999765 589999998642 34567899999999999873 467898521
Q ss_pred EEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 189 YQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 189 ~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
..+.+.+.+.|+.+|...++-.+ ..+.|.+..
T Consensus 83 ---------~~~~~~~~~~L~ddGnlvl~~~~-~~~~W~Sf~ 114 (116)
T cd00028 83 ---------TRVNGNYVLVLLDDGNLVLYDSD-GNFLWQSFD 114 (116)
T ss_pred ---------cCCCCceEEEEeCCCCEEEECCC-CCEEEcCCC
Confidence 11246688899999987665333 356787653
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.8e-06 Score=99.59 Aligned_cols=130 Identities=17% Similarity=0.177 Sum_probs=85.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChh------------------------------hH--------
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQ------------------------------GL-------- 565 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~------------------------------~~-------- 565 (823)
..|+. +.||.|++|.||+|++.+ |+.||||.++....+ ..
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 789999999999999988 999999998743110 00
Q ss_pred --HHHHHHHHHHHhcC----CCceeeEEeEEEe-CCeEEEEEEcccCCCchhhc--cCCCcc----------------cc
Q 003402 566 --KEFKNEMMLIAKLQ----HRNLVRLLGCCIE-QGEKILIYEYMVNKSLDVFL--FDPTKK----------------HL 620 (823)
Q Consensus 566 --~~f~~Ev~~l~~l~----H~Niv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l--~~~~~~----------------~~ 620 (823)
-+|.+|+..+.+++ |.+.|.+-.++.+ ....+|||||++++.+.++- ...... ..
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~ 278 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR 278 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 12455665555553 5555665555544 46788999999999997642 211100 01
Q ss_pred cCHHHHHHHHhccccccCC----CceeceeeceeecCCC
Q 003402 621 LGWQLRVRIIDGIAQDQHM----NPKISDFGMARMFGGD 655 (823)
Q Consensus 621 l~~~~r~~i~~~ia~d~~~----~~KI~DFGla~~~~~~ 655 (823)
.++.|++-.+.||..+.++ .+++.|||++..+..+
T Consensus 279 ~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 279 DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 2233344445566666666 8999999999887543
|
|
| >smart00473 PAN_AP divergent subfamily of APPLE domains | Back alignment and domain information |
|---|
Probab=98.16 E-value=4.9e-06 Score=70.47 Aligned_cols=73 Identities=36% Similarity=0.798 Sum_probs=53.5
Q ss_pred CCceeeecccCCCCccceeeccccChHHHHHHHhc-cCCceeeecccccCCCcceeecc-ccccccccCCCCCCCeeEEe
Q 003402 350 GDRFKKLDDIKLPDLLDVSLNESMNLKECEAECLK-NCSCRAYANSKVTDGGSGCLMWF-GDLIDLKKTDNHTNGVSIYI 427 (823)
Q Consensus 350 ~~~f~~~~~~~~p~~~~~~~~~~~sl~~C~~~CL~-nCsC~A~~~~~~~~~g~gC~~w~-~~l~~~~~~~~~~~~~~~yv 427 (823)
...|..+.++.+++..... ....++++|++.|++ +|+|.||+|.. ++.+|.+|. +.+.+..... ..+.++|.
T Consensus 3 ~~~f~~~~~~~l~~~~~~~-~~~~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~l~~~~~~~~~~~~~--~~~~~~y~ 76 (78)
T smart00473 3 DDCFVRLPNTKLPGFSRIV-ISVASLEECASKCLNSNCSCRSFTYNN---GTKGCLLWSESSLGDARLFP--SGGVDLYE 76 (78)
T ss_pred CceeEEecCccCCCCccee-EcCCCHHHHHHHhCCCCCceEEEEEcC---CCCEEEEeeCCccccceecc--cCCceeEE
Confidence 3568899999998654433 356799999999999 99999999964 345799999 7776665222 33445554
Q ss_pred e
Q 003402 428 R 428 (823)
Q Consensus 428 r 428 (823)
+
T Consensus 77 ~ 77 (78)
T smart00473 77 K 77 (78)
T ss_pred e
Confidence 3
|
Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.12 E-value=6.5e-07 Score=93.26 Aligned_cols=179 Identities=18% Similarity=0.235 Sum_probs=100.9
Q ss_pred HHHhcCCCceeeEEeEEEeC-----CeEEEEEEcccCCCchhhccCCCccc----ccCHHHHH-HHHhcccc--------
Q 003402 574 LIAKLQHRNLVRLLGCCIEQ-----GEKILIYEYMVNKSLDVFLFDPTKKH----LLGWQLRV-RIIDGIAQ-------- 635 (823)
Q Consensus 574 ~l~~l~H~Niv~l~g~~~~~-----~~~~lV~Ey~~~gsL~~~l~~~~~~~----~l~~~~r~-~i~~~ia~-------- 635 (823)
-|-.+.|.|||+++.|+.+. .+..++.|||..|+|.++|+...+.+ ...|.... +|..++-.
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 34456799999999998754 45789999999999999997643322 23444332 23322221
Q ss_pred ------------ccCCCceeceeeceeecC--CCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 003402 636 ------------DQHMNPKISDFGMARMFG--GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701 (823)
Q Consensus 636 ------------d~~~~~KI~DFGla~~~~--~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~ 701 (823)
..++-+||.----..... .......+..-.|-++|-|||+-.....+.++|||+||+..+||..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 223333432100000000 000111222345778999999988888899999999999999998765
Q ss_pred CCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 702 KNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 702 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
--....... ..... ........+-++.- ..++..|++..|..||+|++++.
T Consensus 280 iq~tnseS~--~~~ee----~ia~~i~~len~lq------------r~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 280 IQSTNSESK--VEVEE----NIANVIIGLENGLQ------------RGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred eccCCCcce--eehhh----hhhhheeeccCccc------------cCcCcccccCCCCCCcchhhhhc
Confidence 421111000 00000 00000111111111 12445699999999999998864
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.85 E-value=4.1e-06 Score=99.35 Aligned_cols=186 Identities=17% Similarity=0.197 Sum_probs=123.8
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
...+.+.+.+-+-+|.++.++.++-.. |...++|..... .....+..+.+-.++-..+||-+++..--+.......
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 345678888888999999998775322 333344433221 1112233333333333345677776655555677899
Q ss_pred EEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCC----
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGG---- 654 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~---- 654 (823)
||++|..+++|...|+...-. +.....|++.+++++....++..+++|||+.+..+.
T Consensus 881 L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 999999999998887653211 112245566666777778888999999985432210
Q ss_pred -----------------C----ccc----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003402 655 -----------------D----ELQ----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVY 707 (823)
Q Consensus 655 -----------------~----~~~----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~ 707 (823)
. ... .......||+.|.|||.+.+......+|.|++|++++|.++|.+|+...
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 000 1133467999999999999999999999999999999999999997543
|
|
| >PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins | Back alignment and domain information |
|---|
Probab=97.69 E-value=3.7e-05 Score=58.01 Aligned_cols=43 Identities=42% Similarity=0.729 Sum_probs=34.5
Q ss_pred CCCCCCCCCCccccccCccccCCCCCCCCCC--cceeccceEeecccCC
Q 003402 777 FNLPSPKEPPFTTFTKGKNMKYSSNSTSGTS--EFCSVNDVTVSLIYPR 823 (823)
Q Consensus 777 ~~~~~p~~p~~~~~~~~~~~~~~~~~~s~~~--~~~s~~~~t~~~~~~r 823 (823)
..+|.|++|+|.. .+.... ..+++... +.+|+|++|+|.++||
T Consensus 4 ~~LP~PKqPgF~~---~r~~~e-~~sSss~~~~~~~SvNevTiT~l~~R 48 (48)
T PF11883_consen 4 ATLPQPKQPGFFT---GRSPSE-TDSSSSKQRDESCSVNEVTITMLEAR 48 (48)
T ss_pred ccCCCCCCCCEEe---EcCCCC-cCCCcccccCCCCCeeeEEEEeEecC
Confidence 5799999999998 666555 44444444 7899999999999998
|
; GO: 0004674 protein serine/threonine kinase activity |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.52 E-value=6.2e-05 Score=85.24 Aligned_cols=227 Identities=15% Similarity=0.077 Sum_probs=140.9
Q ss_pred HhcCcceeeeeccccceeEEeeeec--CCcEEEEEEeccCChhhHH--HHHHHHHHHHhc-CCCceeeEEeEEEeCCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL--NGQEVAVKRLSNQSGQGLK--EFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~~VAVK~l~~~~~~~~~--~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~ 597 (823)
.+.+|.++..||.|.|+.|++.... ++..+++|.+.+....... .-..|+.+...+ .|.+++++...+...+..+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 4467888999999999999998643 4678999988654332222 224566666666 5999999999999888889
Q ss_pred EEEEcccCCCchhhccCC-----C--------------cccccCHHHHHHHHhccccccC-CCceeceeeceeecCCCcc
Q 003402 598 LIYEYMVNKSLDVFLFDP-----T--------------KKHLLGWQLRVRIIDGIAQDQH-MNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~-----~--------------~~~~l~~~~r~~i~~~ia~d~~-~~~KI~DFGla~~~~~~~~ 657 (823)
+--||+.++++...+... . ..+.....+++.+..+|....+ +..++.|||.++.+.-..
T Consensus 343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~- 421 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS- 421 (524)
T ss_pred CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccceec-
Confidence 999999999876554110 0 0111222223333444444333 788999999987432111
Q ss_pred cccccccccccccc--ccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 658 QGNTKRIVGTYGYM--SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 658 ~~~~~~~~Gt~~Ym--APE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
....+.-+++ +|+......+-.+.|++|||.-+.|.+++..-.... .....+....+
T Consensus 422 ----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-----------------~~~~~i~~~~~ 480 (524)
T KOG0601|consen 422 ----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-----------------VQSLTIRSGDT 480 (524)
T ss_pred ----ccccccccccccchhhccccccccccccccccccccccccCcccCccc-----------------ccceeeecccc
Confidence 1123344455 455555677899999999999999999876532110 00111111111
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~ 773 (823)
... .........+....+..++..||.+.++..+.+
T Consensus 481 p~~--~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 481 PNL--PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred cCC--CchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 110 111133444555577789999999988876644
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=97.46 E-value=7e-05 Score=73.55 Aligned_cols=76 Identities=18% Similarity=0.114 Sum_probs=56.5
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCcee-eEEeEEEeCCeEEEEEEcccCCCch
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV-RLLGCCIEQGEKILIYEYMVNKSLD 609 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv-~l~g~~~~~~~~~lV~Ey~~~gsL~ 609 (823)
+.|+.|.++.||+++.. ++.|++|....... ....+.+|+.++..+.+.+++ +++.+. ....++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 67899999999999874 77899998754321 223568899999998765554 455443 33458999999999886
Q ss_pred h
Q 003402 610 V 610 (823)
Q Consensus 610 ~ 610 (823)
.
T Consensus 80 ~ 80 (170)
T cd05151 80 T 80 (170)
T ss_pred c
Confidence 4
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0015 Score=59.84 Aligned_cols=100 Identities=25% Similarity=0.406 Sum_probs=63.0
Q ss_pred CEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEec-cCCCCCCCCCceEEEeeCCcEEEEeCCCCeEEEecccCC
Q 003402 54 ETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVA-NRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSRE 132 (823)
Q Consensus 54 ~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvA-Nr~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~ 132 (823)
+.+.+.+|.+.|-|-.-|+ |-| |.. ..++||.. +...... ....+.|..+|||||.|..+.++|++...
T Consensus 12 ~p~~~~s~~~~L~l~~dGn-----Lvl-~~~-~~~~iWss~~t~~~~~-~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~-- 81 (114)
T PF01453_consen 12 SPLTSSSGNYTLILQSDGN-----LVL-YDS-NGSVIWSSNNTSGRGN-SGCYLVLQDDGNLVLYDSSGNVLWQSFDY-- 81 (114)
T ss_dssp EEEEECETTEEEEEETTSE-----EEE-EET-TTEEEEE--S-TTSS--SSEEEEEETTSEEEEEETTSEEEEESTTS--
T ss_pred cccccccccccceECCCCe-----EEE-EcC-CCCEEEEecccCCccc-cCeEEEEeCCCCEEEEeecceEEEeecCC--
Confidence 4555545778887766543 333 332 25679999 4333322 45789999999999999999999999432
Q ss_pred CCCcEEEEee--CCCEEEEeCCCCCCCCCceeeecCCCC
Q 003402 133 VKNPVAQLLD--NGNLVIRDNSGSNSTESYLWQSFDYPT 169 (823)
Q Consensus 133 ~~~~~a~LlD--sGNlVl~~~~~~~~~~~~lWQSFD~PT 169 (823)
.........+ .||++ ... ...+.|.|=+.|+
T Consensus 82 ptdt~L~~q~l~~~~~~-~~~-----~~~~sw~s~~dps 114 (114)
T PF01453_consen 82 PTDTLLPGQKLGDGNVT-GKN-----DSLTSWSSNTDPS 114 (114)
T ss_dssp SS-EEEEEET--TSEEE-EES-----TSSEEEESS----
T ss_pred CccEEEeccCcccCCCc-ccc-----ceEEeECCCCCCC
Confidence 2345566666 88888 643 2467888876663
|
Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B .... |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00047 Score=79.10 Aligned_cols=148 Identities=18% Similarity=0.183 Sum_probs=92.0
Q ss_pred ecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCcccccCHHH
Q 003402 546 LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL 625 (823)
Q Consensus 546 ~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~ 625 (823)
..++.+|.|...+.......+...+-++.|+.++||||++++....+.+..|||+|-+. .|..++..... ....|..
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~~-~~v~~Gl 110 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELGK-EEVCLGL 110 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhHH-HHHHHHH
Confidence 34688899998876655334556778899999999999999999999999999999763 33333332211 1111211
Q ss_pred H-HHHHhc-----------------cccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhH
Q 003402 626 R-VRIIDG-----------------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDV 687 (823)
Q Consensus 626 r-~~i~~~-----------------ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDV 687 (823)
. +..|.. |..+..+.-||.+|-++....+... ......--..|..|+.+-... -..|.
T Consensus 111 ~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~--~s~D~ 186 (690)
T KOG1243|consen 111 FQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE--WSIDS 186 (690)
T ss_pred HHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--cchhh
Confidence 1 111111 1225677889999988754322110 011111122355666443222 34699
Q ss_pred HHHHHHHHHHHhC
Q 003402 688 FSFGVLMLEILSS 700 (823)
Q Consensus 688 wSfGvvl~Elltg 700 (823)
|-||++++|++.|
T Consensus 187 ~~Lg~li~el~ng 199 (690)
T KOG1243|consen 187 WGLGCLIEELFNG 199 (690)
T ss_pred hhHHHHHHHHhCc
Confidence 9999999999998
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.00016 Score=82.24 Aligned_cols=174 Identities=14% Similarity=0.071 Sum_probs=114.4
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCc-eeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN-LVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~N-iv~l~g~~~~~~~~~lV~E 601 (823)
.+.-+...+.+++|++++++|.+-.-.+...+|.+... .+..-++++|.+++||| .++.++-+......+++++
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~ 314 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMR 314 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhh
Confidence 33444455778999999999987543344445554322 45566889999999999 8888888888889999999
Q ss_pred cccCC-CchhhccC-CCcccccCHHHHHHH-H-------------hccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 602 YMVNK-SLDVFLFD-PTKKHLLGWQLRVRI-I-------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 602 y~~~g-sL~~~l~~-~~~~~~l~~~~r~~i-~-------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
|+..+ +....... ....+...+..-.+. . .+-+...+...|..||+.+..+.... ......
T Consensus 315 i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~---~~~t~~ 391 (829)
T KOG0576|consen 315 ICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEEEVKLLDFAVPPQLTRTM---KPRTAI 391 (829)
T ss_pred hhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcccccccccccccccccCCcccCccc---ccccCC
Confidence 99887 22111100 000000000000000 0 11111234567999999988765432 234578
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT 704 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~ 704 (823)
+|+.|||||+...+.+..+.|+|+.++--.++.-|-+|.
T Consensus 392 ~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 392 GTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred CCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 999999999999999999999999998777777666654
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0099 Score=66.56 Aligned_cols=147 Identities=20% Similarity=0.296 Sum_probs=94.8
Q ss_pred ceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCeEEEEEEcccC-CCchhh
Q 003402 538 FGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEKILIYEYMVN-KSLDVF 611 (823)
Q Consensus 538 fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~----~~~~~lV~Ey~~~-gsL~~~ 611 (823)
-.+.||+.. .+|..++.|++.....+....-..-++..+++.|+|+|++..++.. +...++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 346788865 4689999999943322222223345778899999999999998873 4578999999987 567665
Q ss_pred ccCCCcc----------------cccCHHHHHHHHhc--------cc----------cccCCCceeceeeceeecCCCcc
Q 003402 612 LFDPTKK----------------HLLGWQLRVRIIDG--------IA----------QDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 612 l~~~~~~----------------~~l~~~~r~~i~~~--------ia----------~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
-+..... +..-|....++..+ +| .+.+++++|+-.|..-.+..+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~ 448 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT 448 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCCC
Confidence 5432211 12346666665432 22 24555677776666655544331
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN 703 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p 703 (823)
.. +. --.+-|.=.||.+++.|.||..+
T Consensus 449 ~~----------------le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 449 EP----------------LE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cc----------------hh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 10 10 12356888999999999999765
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0045 Score=63.32 Aligned_cols=82 Identities=15% Similarity=0.197 Sum_probs=64.5
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCC--CceeeEEeEEEeCC---eEEEEEEccc
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQH--RNLVRLLGCCIEQG---EKILIYEYMV 604 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H--~Niv~l~g~~~~~~---~~~lV~Ey~~ 604 (823)
+.|+.|.++.||+++..+|+.+++|....... .....+.+|++++..+++ .++.+++.+..+.. ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 67899999999999887778999999764322 134678999999999976 44577777776542 6689999999
Q ss_pred CCCchhhc
Q 003402 605 NKSLDVFL 612 (823)
Q Consensus 605 ~gsL~~~l 612 (823)
+.++...+
T Consensus 84 G~~l~~~~ 91 (223)
T cd05154 84 GRVLRDRL 91 (223)
T ss_pred CEecCCCC
Confidence 99887765
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0026 Score=53.29 Aligned_cols=51 Identities=12% Similarity=0.304 Sum_probs=36.6
Q ss_pred eecccCCCCccceeeccccChHHHHHHHhccCCceeeecccccCCCcceeecccc
Q 003402 355 KLDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFGD 409 (823)
Q Consensus 355 ~~~~~~~p~~~~~~~~~~~sl~~C~~~CL~nCsC~A~~~~~~~~~g~gC~~w~~~ 409 (823)
.++++.++..+.... ...+.++|++.|+.+|+|.||.|.. +...|+++...
T Consensus 8 ~~~~~~~~g~d~~~~-~~~s~~~Cq~~C~~~~~C~afT~~~---~~~~C~lk~~~ 58 (73)
T cd01100 8 QGSNVDFRGGDLSTV-FASSAEQCQAACTADPGCLAFTYNT---KSKKCFLKSSE 58 (73)
T ss_pred ccCCCccccCCccee-ecCCHHHHHHHcCCCCCceEEEEEC---CCCeEEcccCC
Confidence 345666665544333 3568999999999999999999863 23469987653
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.011 Score=58.05 Aligned_cols=84 Identities=14% Similarity=0.222 Sum_probs=59.9
Q ss_pred eeeccccceeEEeeeecCCcEEEEEE-eccC--Ch-----hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKR-LSNQ--SG-----QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~-l~~~--~~-----~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
..+++|+=+.+|.+.+.+ .++.+|. +.+. .+ -..+.-++|++++.+++--.|-.-.=+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 457899999999997744 3466663 3222 11 1124577899999998765555555566788889999999
Q ss_pred ccCCCchhhccCC
Q 003402 603 MVNKSLDVFLFDP 615 (823)
Q Consensus 603 ~~~gsL~~~l~~~ 615 (823)
+++..|.+.+...
T Consensus 81 I~G~~lkd~l~~~ 93 (204)
T COG3642 81 IEGELLKDALEEA 93 (204)
T ss_pred eCChhHHHHHHhc
Confidence 9999999888654
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.02 Score=55.96 Aligned_cols=116 Identities=22% Similarity=0.278 Sum_probs=74.3
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCcee-eEEeEEEeCCeEEEEEEcccCCC
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV-RLLGCCIEQGEKILIYEYMVNKS 607 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv-~l~g~~~~~~~~~lV~Ey~~~gs 607 (823)
..+.||+|.+|.||+|.+.. ..+|+|.-+..+ ....+..|++++..++-.++- +++.|- +-.+.|||+.+-.
T Consensus 26 v~~~L~KG~~s~Vyl~~~~~-~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~~ 98 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWRG-GEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGRP 98 (201)
T ss_pred hhhhhhcccccEEEEeeccC-ceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCcc
Confidence 34789999999999999854 588888765443 346789999999998866654 344442 2344599999988
Q ss_pred chhhccCCCcccccCHHHHHHH--Hhcccc-----------ccCCCceeceeeceee
Q 003402 608 LDVFLFDPTKKHLLGWQLRVRI--IDGIAQ-----------DQHMNPKISDFGMARM 651 (823)
Q Consensus 608 L~~~l~~~~~~~~l~~~~r~~i--~~~ia~-----------d~~~~~KI~DFGla~~ 651 (823)
|...-......+.+......-+ ..||-+ -.+..+-|.||--|+.
T Consensus 99 L~~~~~~~~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 99 LGKLEIGGDRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhhcccHHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 8776543223332222222111 123333 1233678999988763
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.012 Score=68.03 Aligned_cols=124 Identities=15% Similarity=0.126 Sum_probs=78.4
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCC----------------------h--------hhHH----------HHHH
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS----------------------G--------QGLK----------EFKN 570 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~----------------------~--------~~~~----------~f~~ 570 (823)
+-|+.++-|.||+|++++|+.||||+.+..- . ...+ .|.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6789999999999999999999999875321 0 0011 2445
Q ss_pred HHHHHHhc----CCCceeeEEeEEEe-CCeEEEEEEcccCCCchhhccCCCcccc------------------cCHHHHH
Q 003402 571 EMMLIAKL----QHRNLVRLLGCCIE-QGEKILIYEYMVNKSLDVFLFDPTKKHL------------------LGWQLRV 627 (823)
Q Consensus 571 Ev~~l~~l----~H~Niv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~------------------l~~~~r~ 627 (823)
|+..+.++ ++..=|++-.++.+ .....|+|||+++-.+.+...-...... .++-|.+
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaD 290 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHAD 290 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccC
Confidence 66555554 33444555555544 5788999999999888877421111100 1111112
Q ss_pred HHHhccccccCCCceeceeeceeecCC
Q 003402 628 RIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 628 ~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
--+-||+.+.++.+-+-|||+...+..
T Consensus 291 pHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 291 PHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred CCccceEEecCCcEEEEcCcceecCCH
Confidence 222355557778888999999987654
|
|
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.11 Score=52.49 Aligned_cols=93 Identities=18% Similarity=0.317 Sum_probs=65.2
Q ss_pred CCCCCcccHHHHHHHhcCcceeeeeccccc-eeEEeeeecCCcEEEEEEecc---C--------Ch----------hhHH
Q 003402 509 DSSLPLFSFASVTAATENFSIQSKLGEGGF-GPVYKGRLLNGQEVAVKRLSN---Q--------SG----------QGLK 566 (823)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~f~~~~~LG~G~f-G~Vy~g~~~~~~~VAVK~l~~---~--------~~----------~~~~ 566 (823)
.+.+..|+. -+.+++..+.||+|.- |.|||.++ +|+.+|+|..+. . -. ...+
T Consensus 26 gPKL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 99 (207)
T PF13095_consen 26 GPKLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYAD 99 (207)
T ss_pred CCCcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcC
Confidence 344555655 2277889999999999 99999998 667999999321 0 00 1224
Q ss_pred HHHHHHHHHHhcC---CCce--eeEEeEEEeC------------------CeEEEEEEcccCCC
Q 003402 567 EFKNEMMLIAKLQ---HRNL--VRLLGCCIEQ------------------GEKILIYEYMVNKS 607 (823)
Q Consensus 567 ~f~~Ev~~l~~l~---H~Ni--v~l~g~~~~~------------------~~~~lV~Ey~~~gs 607 (823)
.|..|.+..++|+ +.++ |+.+|+..-. ....||.||++...
T Consensus 100 PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~ 163 (207)
T PF13095_consen 100 PFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP 163 (207)
T ss_pred hHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc
Confidence 6889999888885 4566 9999998422 13467888876654
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.054 Score=53.22 Aligned_cols=84 Identities=18% Similarity=0.226 Sum_probs=58.8
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEE-eccC-------ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKR-LSNQ-------SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~-l~~~-------~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
....|-+|+-+.|+++.+ .|+...||. +.+. ..-..++.++|++++.+++--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 457889999999999988 556666663 3322 1123456789999999987555544444566777778999
Q ss_pred EcccC-CCchhhcc
Q 003402 601 EYMVN-KSLDVFLF 613 (823)
Q Consensus 601 Ey~~~-gsL~~~l~ 613 (823)
||+++ .++.+++.
T Consensus 90 E~~~g~~~vk~~i~ 103 (229)
T KOG3087|consen 90 EFIDGASTVKDFIL 103 (229)
T ss_pred EeccchhHHHHHHH
Confidence 99977 46777764
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.14 Score=51.67 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=50.6
Q ss_pred eeeccccceeEEeeeecC-------CcEEEEEEeccCC----------------------hhhHHHHH----HHHHHHHh
Q 003402 531 SKLGEGGFGPVYKGRLLN-------GQEVAVKRLSNQS----------------------GQGLKEFK----NEMMLIAK 577 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~-------~~~VAVK~l~~~~----------------------~~~~~~f~----~Ev~~l~~ 577 (823)
..||.|.=+.||.|...+ +..+|||..+... ....+.+. +|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999997653 4799999764210 00122333 79999998
Q ss_pred cCC--CceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 578 LQH--RNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 578 l~H--~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
+.. -++-+.+++ ...+|||||+.+..+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~ 111 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQV 111 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCc
Confidence 853 455566654 567899999977543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.063 Score=62.00 Aligned_cols=82 Identities=18% Similarity=0.253 Sum_probs=55.8
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCChh-------------------------------------hHHHHHHHHH
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ-------------------------------------GLKEFKNEMM 573 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~-------------------------------------~~~~f~~Ev~ 573 (823)
+.||.-+.|.||+|++++|+.||||.-+..-.. ..-.|.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 689999999999999999999999975432100 0113566665
Q ss_pred HHHhc----CCCc---eeeEEeEEEe-CCeEEEEEEcccCCCchhhc
Q 003402 574 LIAKL----QHRN---LVRLLGCCIE-QGEKILIYEYMVNKSLDVFL 612 (823)
Q Consensus 574 ~l~~l----~H~N---iv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l 612 (823)
-..++ .|-+ =|.+-.++.+ ...+.|+||||++..+.+..
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~ 293 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLD 293 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHH
Confidence 44443 4666 2234444433 46789999999999887653
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.025 Score=65.61 Aligned_cols=133 Identities=20% Similarity=0.200 Sum_probs=78.3
Q ss_pred HHHHhccccccCCCceeceeeceeecCCC-cc-----ccccc-cccccccccccccccCCCCCchhhHHHHHHHHHHHHh
Q 003402 627 VRIIDGIAQDQHMNPKISDFGMARMFGGD-EL-----QGNTK-RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699 (823)
Q Consensus 627 ~~i~~~ia~d~~~~~KI~DFGla~~~~~~-~~-----~~~~~-~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt 699 (823)
..-++.|-.+..+..||+-|+.+....+. ++ ..... -..-...|.|||++.+...+.++|++|+||++|-|..
T Consensus 125 ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~ 204 (700)
T KOG2137|consen 125 NIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYN 204 (700)
T ss_pred ccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEec
Confidence 34456666788889999999987654331 11 11110 1123457999999999888999999999999999996
Q ss_pred CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 700 SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 700 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
|+++.....+.. +.+.... ...+ ... -.+......++.+=+.+.+..++.-||++.++..
T Consensus 205 ~gk~i~~a~~~~---~~~~~~~----~~~~---~~~-~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 205 GGKSIIAANGGL---LSYSFSR----NLLN---AGA-FGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred CCcchhhccCCc---chhhhhh----cccc---ccc-ccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 555432221111 0110000 0000 000 0111233344555566678889999998877654
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.48 Score=47.54 Aligned_cols=67 Identities=21% Similarity=0.204 Sum_probs=41.9
Q ss_pred eEEeeeecCCcEEEEEEeccCC-------------h-------------hhHHHHHHHHHHHHhcCCC--ceeeEEeEEE
Q 003402 540 PVYKGRLLNGQEVAVKRLSNQS-------------G-------------QGLKEFKNEMMLIAKLQHR--NLVRLLGCCI 591 (823)
Q Consensus 540 ~Vy~g~~~~~~~VAVK~l~~~~-------------~-------------~~~~~f~~Ev~~l~~l~H~--Niv~l~g~~~ 591 (823)
.||.|..+++..||||..+... . .......+|.+.|.++..- ++-+.+.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 3899999999999999764210 0 0123467899999999765 45566544
Q ss_pred eCCeEEEEEEccc--CCCchh
Q 003402 592 EQGEKILIYEYMV--NKSLDV 610 (823)
Q Consensus 592 ~~~~~~lV~Ey~~--~gsL~~ 610 (823)
....|||||++ +..+..
T Consensus 79 --~~~~ivME~I~~~G~~~~~ 97 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPR 97 (188)
T ss_dssp --ETTEEEEE--EETTEEGGC
T ss_pred --eCCEEEEEecCCCccchhh
Confidence 23479999998 544444
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.92 E-value=0.14 Score=57.77 Aligned_cols=48 Identities=23% Similarity=0.282 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhcCCCceeeEEeEEEeC-CeEEEEEEcccCCCchhhccC
Q 003402 566 KEFKNEMMLIAKLQHRNLVRLLGCCIEQ-GEKILIYEYMVNKSLDVFLFD 614 (823)
Q Consensus 566 ~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-~~~~lV~Ey~~~gsL~~~l~~ 614 (823)
.+.+-....++.++|+|+..++.+.... ....+|+|++ +-||.+.+..
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~ 75 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKT 75 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHh
Confidence 3455566788899999999999887654 3467788888 5677777643
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.68 Score=51.14 Aligned_cols=173 Identities=16% Similarity=0.157 Sum_probs=99.9
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEE-------EeCCeEEEEE
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCC-------IEQGEKILIY 600 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~-------~~~~~~~lV~ 600 (823)
....||+|+-+.+|--- +-...+.|+..........+- +..|.+. .||-+-.-+.+= .+....-++|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 45789999999999542 111223455544322222221 2223333 455433311111 0111234556
Q ss_pred EcccCCC-chhhccC---CCcccccCHHHHHHHHhcccc-------------c-cCCCceeceeeceeecCCCccccccc
Q 003402 601 EYMVNKS-LDVFLFD---PTKKHLLGWQLRVRIIDGIAQ-------------D-QHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 601 Ey~~~gs-L~~~l~~---~~~~~~l~~~~r~~i~~~ia~-------------d-~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
.-+++.. +..++.- ...-..-.|...++.++++|. | ...+..++|=|..++++.+.......
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n 169 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINAN 169 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccC
Confidence 5555442 2222221 122245789999999988875 1 12346788988888887776543322
Q ss_pred -----ccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhC-CCCCCC
Q 003402 663 -----RIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSS-KKNTGV 706 (823)
Q Consensus 663 -----~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg-~~p~~~ 706 (823)
-.+|...|.+||.-. +-.-+...|-+.+||+++|++.| +.|+..
T Consensus 170 g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG 224 (637)
T COG4248 170 GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG 224 (637)
T ss_pred CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence 246888999999754 22346789999999999999987 888754
|
|
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=90.19 E-value=0.15 Score=47.12 Aligned_cols=45 Identities=24% Similarity=0.381 Sum_probs=35.1
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhc
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL 578 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l 578 (823)
+-||.|+.|.||+|++.+|+.||||..+.. ..+.+...+.+|..+
T Consensus 17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~---i~~~i~~Dl~~l~~~ 61 (119)
T PF03109_consen 17 EPLASASIAQVHRARLKDGEEVAVKVQRPG---IEEQIEADLRILRRL 61 (119)
T ss_pred chhhheehhhheeeeecccchhhhhhcchH---HHHHHHHHHHHHHHH
Confidence 689999999999999999999999998653 234555566655543
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=89.03 E-value=0.86 Score=56.45 Aligned_cols=177 Identities=18% Similarity=0.187 Sum_probs=105.0
Q ss_pred HHHHHHHHHhcCCCceeeEEeEEEeCCeEE----EEEEcccCCCchhhccCCCcccc-cCHHHHHHHHhcccc-------
Q 003402 568 FKNEMMLIAKLQHRNLVRLLGCCIEQGEKI----LIYEYMVNKSLDVFLFDPTKKHL-LGWQLRVRIIDGIAQ------- 635 (823)
Q Consensus 568 f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~----lV~Ey~~~gsL~~~l~~~~~~~~-l~~~~r~~i~~~ia~------- 635 (823)
..-|...+.++.|+|+++++++-.+....- +..||+..-++...+........ ....++.+...|.+.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~ 308 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLE 308 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccc
Confidence 445777888999999999999987754433 34567777666666543221100 001112222222221
Q ss_pred --------------ccCCCceec--eeeceeecCCCccccccccccccccccccccccCCCCCc--hhhHHHHHHHHHHH
Q 003402 636 --------------DQHMNPKIS--DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV--KSDVFSFGVLMLEI 697 (823)
Q Consensus 636 --------------d~~~~~KI~--DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~--ksDVwSfGvvl~El 697 (823)
+..+...++ ||+..+.+...... ....-+..|-|||......+.. ..|+|.+|.++..+
T Consensus 309 ~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~ 385 (1351)
T KOG1035|consen 309 HVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQL 385 (1351)
T ss_pred eeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHHHHHHhhh
Confidence 344555666 88887765433211 1123455688888777666544 47999999999999
Q ss_pred HhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 698 LSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 698 ltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
..|..+.... .....+++.... . .+......|...++++|+++.+++.+.
T Consensus 386 ~~~~~i~~~~-----------------~~~~~~l~~~~~-----~---~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 386 SQGEDISEKS-----------------AVPVSLLDVLST-----S---ELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred hhcCcccccc-----------------cchhhhhccccc-----h---hhhhhhhhhcchhhhhccchhhhhhch
Confidence 9877653211 001111111110 0 344456679999999999999998863
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.88 E-value=1.4 Score=46.35 Aligned_cols=119 Identities=21% Similarity=0.185 Sum_probs=72.4
Q ss_pred cceeeeeccccceeEEeeeecCCcEEEEEEeccC--------------------C--hhhHHHHHHHHHHHHhcCCC--c
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--------------------S--GQGLKEFKNEMMLIAKLQHR--N 582 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--------------------~--~~~~~~f~~Ev~~l~~l~H~--N 582 (823)
..+.++||.|.=+.||.|..+.|.++|||.=+.. + ......-.+|.+.|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 3456899999999999999999999999953210 0 00122346788888888644 4
Q ss_pred eeeEEeEEEeCCeEEEEEEcccCCCchhhccCCC-cccccCHHH-HHHH------------HhccccccCCCceeceeec
Q 003402 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPT-KKHLLGWQL-RVRI------------IDGIAQDQHMNPKISDFGM 648 (823)
Q Consensus 583 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~-r~~i------------~~~ia~d~~~~~KI~DFGl 648 (823)
+-+.+++ +...+||||+++-.|...-.+.. ....+.-.. -..+ --||..++++.+.+.||=-
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ 248 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQ 248 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCcc
Confidence 5554433 55679999999877655431111 111111000 0111 1245557888899999843
Q ss_pred e
Q 003402 649 A 649 (823)
Q Consensus 649 a 649 (823)
+
T Consensus 249 ~ 249 (304)
T COG0478 249 A 249 (304)
T ss_pred c
Confidence 3
|
|
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.48 E-value=1.6 Score=47.32 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=59.0
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCC---CceeeEEeEEEe---CCeEEEEEEc
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH---RNLVRLLGCCIE---QGEKILIYEY 602 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H---~Niv~l~g~~~~---~~~~~lV~Ey 602 (823)
-.+.||+|..+.||+-...+++ +.+|..+. ......|.+|.+.++.+.- ..+.+++++|.. .+..+||||+
T Consensus 18 ~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 18 RVECISEQPYAALWALYDSQGN-PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred eeeecCCccceeEEEEEcCCCC-EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 3478999999999998765554 56666432 1123578999999998853 357788888754 3668999999
Q ss_pred ccCCCchh
Q 003402 603 MVNKSLDV 610 (823)
Q Consensus 603 ~~~gsL~~ 610 (823)
++++++.+
T Consensus 95 i~G~~~~~ 102 (297)
T PRK10593 95 LRGVSVEA 102 (297)
T ss_pred cCCEecCC
Confidence 99988875
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=87.36 E-value=0.9 Score=45.59 Aligned_cols=63 Identities=25% Similarity=0.357 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCC-CceeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHHhcccc
Q 003402 569 KNEMMLIAKLQH-RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635 (823)
Q Consensus 569 ~~Ev~~l~~l~H-~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia~ 635 (823)
.+|.-++..+++ +++.+++|+|- .++|.||.+.+++...-.....-....|..|.+||.+++.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~ 70 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLE 70 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHH
Confidence 458888999987 69999999994 3679999998766432100011123679999999887664
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=87.33 E-value=1.7 Score=46.21 Aligned_cols=74 Identities=15% Similarity=0.090 Sum_probs=48.1
Q ss_pred eeEEeeeecCCcEEEEEEeccCChh-hHH----------HHHHHHHHHHhcCCC--ceeeEEeEEEe-----CCeEEEEE
Q 003402 539 GPVYKGRLLNGQEVAVKRLSNQSGQ-GLK----------EFKNEMMLIAKLQHR--NLVRLLGCCIE-----QGEKILIY 600 (823)
Q Consensus 539 G~Vy~g~~~~~~~VAVK~l~~~~~~-~~~----------~f~~Ev~~l~~l~H~--Niv~l~g~~~~-----~~~~~lV~ 600 (823)
..|++..+ +|+.+.||+....... ..+ .+.+|...+.+++.. ...+.+++... ....+||+
T Consensus 36 rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 36 RRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred ceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 34667666 6778999977433211 112 377899988888433 33455555543 23578999
Q ss_pred EcccCC-Cchhhcc
Q 003402 601 EYMVNK-SLDVFLF 613 (823)
Q Consensus 601 Ey~~~g-sL~~~l~ 613 (823)
|++++- +|.+++.
T Consensus 115 e~l~~~~sL~~~~~ 128 (268)
T PRK15123 115 EDLAPTISLEDYCA 128 (268)
T ss_pred eeCCCCccHHHHHH
Confidence 999986 7888874
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=87.30 E-value=0.16 Score=57.20 Aligned_cols=74 Identities=23% Similarity=0.404 Sum_probs=58.7
Q ss_pred HHHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 003402 520 VTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ 593 (823)
Q Consensus 520 ~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~ 593 (823)
+....++|+....+|.|+||+|+.+.... +..+|||+|..... ....+..+|+..++++.|++++++...+..+
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~ 119 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER 119 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence 34445788899999999999999997654 45899999875433 3345678899999999999999998887654
|
|
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=86.57 E-value=1.9 Score=53.73 Aligned_cols=79 Identities=19% Similarity=0.385 Sum_probs=58.5
Q ss_pred eeeeccccceeEEeeeecCC---cEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCce--eeEEeEEEeC---CeEEEE
Q 003402 530 QSKLGEGGFGPVYKGRLLNG---QEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQ-HRNL--VRLLGCCIEQ---GEKILI 599 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~~~---~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~Ni--v~l~g~~~~~---~~~~lV 599 (823)
.+.|+.|.+..+|+....++ ..+++|+..... ......+.+|++++..+. |+++ .+++++|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 47889999999999877553 367777754322 123457889999999995 6665 7888888764 467899
Q ss_pred EEcccCCCc
Q 003402 600 YEYMVNKSL 608 (823)
Q Consensus 600 ~Ey~~~gsL 608 (823)
|||+++..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999987654
|
|
| >PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
Probab=86.41 E-value=0.71 Score=38.58 Aligned_cols=54 Identities=19% Similarity=0.456 Sum_probs=39.0
Q ss_pred ceeeecccCCCCccceeeccccChHHHHHHHhccCC-ceeeecccccCCCcceeecccc
Q 003402 352 RFKKLDDIKLPDLLDVSLNESMNLKECEAECLKNCS-CRAYANSKVTDGGSGCLMWFGD 409 (823)
Q Consensus 352 ~f~~~~~~~~p~~~~~~~~~~~sl~~C~~~CL~nCs-C~A~~~~~~~~~g~gC~~w~~~ 409 (823)
.|..+.+..+........ ...++++|.+.|+.+-. |.+|.|.. ....|.+...+
T Consensus 3 ~f~~~~~~~l~~~~~~~~-~v~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~L~~~~ 57 (79)
T PF00024_consen 3 AFERIPGYRLSGHSIKEI-NVPSLEECAQLCLNEPRRCKSFNYDP---SSKTCYLSSSD 57 (79)
T ss_dssp TEEEEEEEEEESCEEEEE-EESSHHHHHHHHHHSTT-ESEEEEET---TTTEEEEECSS
T ss_pred CeEEECCEEEeCCcceEE-cCCCHHHHHhhcCcCcccCCeEEEEC---CCCEEEEcCCC
Confidence 366777777666443333 44599999999999999 99999964 23469986544
|
These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs It has been shown that, the N-terminal N domains of members of the plasminogen/hepatocyte growth factor family, the apple domains of the plasma prekallikrein/coagulation factor XI family, and domains of various nematode proteins belong to the same module superfamily, the PAN module []. PAN contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge that links the N and C termini of the domain.; PDB: 1GP9_C 2QJ2_B 1GMO_H 1NK1_B 3MKP_B 1BHT_B 3HN4_A 1GMN_A 3HMS_A 3HMT_B .... |
| >smart00223 APPLE APPLE domain | Back alignment and domain information |
|---|
Probab=84.87 E-value=1.4 Score=37.39 Aligned_cols=52 Identities=12% Similarity=0.192 Sum_probs=35.7
Q ss_pred ecccCCCCccceeeccccChHHHHHHHhccCCceeeecccccCCCcceeeccc
Q 003402 356 LDDIKLPDLLDVSLNESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFG 408 (823)
Q Consensus 356 ~~~~~~p~~~~~~~~~~~sl~~C~~~CL~nCsC~A~~~~~~~~~g~gC~~w~~ 408 (823)
..++.+...+.... ...+.++|++.|..+=.|.||.|..-......|+++..
T Consensus 6 ~~~~df~G~Dl~~~-~~~~~~~Cq~~Ct~~~~C~~FTf~~~~~~~~~C~LK~s 57 (79)
T smart00223 6 YKNVDFRGSDINTV-YVPSAQVCQKRCTSHPRCLFFTFSTNEPPEEKCLLKDS 57 (79)
T ss_pred ccCccccCceeeee-ecCCHHHHHHhhcCCCCccEEEeeCCCCCCCEeEeCcC
Confidence 35556665544333 45689999999999999999998642222226988654
|
Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder. |
| >KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=84.86 E-value=0.17 Score=63.73 Aligned_cols=135 Identities=12% Similarity=-0.055 Sum_probs=89.9
Q ss_pred HHHHHHHHHhcCCCceeeEEeEEE--eCCeEEEEEEcccCCCchhhccCCCcc-cc---cCHHHHHHH---H--------
Q 003402 568 FKNEMMLIAKLQHRNLVRLLGCCI--EQGEKILIYEYMVNKSLDVFLFDPTKK-HL---LGWQLRVRI---I-------- 630 (823)
Q Consensus 568 f~~Ev~~l~~l~H~Niv~l~g~~~--~~~~~~lV~Ey~~~gsL~~~l~~~~~~-~~---l~~~~r~~i---~-------- 630 (823)
...|....+...|+++++...-.. +..+.+.+++|+..|.+...|.....+ .. .....+.++ .
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 344445556678999887665443 245678899999999998877442221 11 111112222 1
Q ss_pred -------------hccccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHH
Q 003402 631 -------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697 (823)
Q Consensus 631 -------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~El 697 (823)
.+.+...+.++|+.++||.|...... ...+...+++.||+|+....-.++.++|+|..|+.+|+.
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~--sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVL--SFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCchH--hhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 11223677889999999999543322 223346788899999999999999999999999999998
Q ss_pred HhCCCCC
Q 003402 698 LSSKKNT 704 (823)
Q Consensus 698 ltg~~p~ 704 (823)
--|..++
T Consensus 1434 s~~n~~f 1440 (2724)
T KOG1826|consen 1434 SDGNAYF 1440 (2724)
T ss_pred hcccHHH
Confidence 7766553
|
|
| >PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins | Back alignment and domain information |
|---|
Probab=84.33 E-value=0.34 Score=35.60 Aligned_cols=30 Identities=23% Similarity=0.667 Sum_probs=24.3
Q ss_pred CCc-c-ccccCCCcccccC-CCCccccCCCCcc
Q 003402 302 PFC-H-YGDCGPNSICSVD-QTSHCECLEGFKF 331 (823)
Q Consensus 302 ~~C-~-~~~CG~~g~C~~~-~~~~C~C~~Gf~~ 331 (823)
|+| . ...|++++.|... ++-.|.|++||+.
T Consensus 3 dEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~ 35 (42)
T PF07645_consen 3 DECAEGPHNCPENGTCVNTEGSYSCSCPPGYEL 35 (42)
T ss_dssp STTTTTSSSSSTTSEEEEETTEEEEEESTTEEE
T ss_pred cccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEE
Confidence 678 3 5689999999764 5568999999984
|
Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A .... |
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=83.10 E-value=3.2 Score=42.30 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=58.4
Q ss_pred eeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCC--ceeeEEeEEEe---CCeEEEEEEccc
Q 003402 530 QSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHR--NLVRLLGCCIE---QGEKILIYEYMV 604 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~--Niv~l~g~~~~---~~~~~lV~Ey~~ 604 (823)
++.|+.|..+.||+....+ ..+++|..... .....+.+|+.++..+... .+.+++.++.. ....+++||+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 3689999999999999877 68999997543 4456788899988888533 34567765543 345789999999
Q ss_pred CCCchh
Q 003402 605 NKSLDV 610 (823)
Q Consensus 605 ~gsL~~ 610 (823)
+..+..
T Consensus 79 g~~~~~ 84 (239)
T PF01636_consen 79 GRPLDD 84 (239)
T ss_dssp SEEHHH
T ss_pred cccccc
Confidence 988877
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=81.31 E-value=4.1 Score=42.12 Aligned_cols=72 Identities=24% Similarity=0.260 Sum_probs=54.0
Q ss_pred eeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCc--eeeEEeEEEeCCeEEEEEEcccCCC
Q 003402 531 SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN--LVRLLGCCIEQGEKILIYEYMVNKS 607 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~N--iv~l~g~~~~~~~~~lV~Ey~~~gs 607 (823)
..||+|..+.||+. .+..+++|...... ......+|.+++..+..-. +.+.+++....+...+|||++++..
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 67999999999984 24457788775432 2345688999999886443 4677778777788889999999963
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=80.64 E-value=4.7 Score=41.91 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=54.7
Q ss_pred eeccccc-eeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEEcccCCCch
Q 003402 532 KLGEGGF-GPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYEYMVNKSLD 609 (823)
Q Consensus 532 ~LG~G~f-G~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 609 (823)
.|-.|.. ..||+.... +..+.||+..... ..+..+|++++..+. |--+.+++++....+..++|||++++.+|.
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 3445555 789998764 4678888875432 345678998888874 444557788777767789999999998886
Q ss_pred hh
Q 003402 610 VF 611 (823)
Q Consensus 610 ~~ 611 (823)
..
T Consensus 81 ~~ 82 (244)
T cd05150 81 AL 82 (244)
T ss_pred Hh
Confidence 54
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 823 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-37 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-36 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 9e-32 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 9e-32 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-25 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-25 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 3e-25 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 6e-23 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 8e-17 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 8e-17 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 8e-17 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 8e-17 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 8e-17 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 9e-17 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 9e-17 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 9e-17 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 9e-17 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 9e-17 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-16 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-16 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 2e-16 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 4e-16 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 1e-15 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-15 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-15 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-15 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-15 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-15 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 5e-15 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 5e-15 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 8e-15 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 8e-15 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 9e-15 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 9e-15 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 2e-14 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-14 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 2e-14 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-14 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 2e-14 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 2e-14 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 3e-14 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 3e-14 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 4e-14 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 6e-14 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 9e-14 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-13 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 1e-13 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 1e-13 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-13 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 1e-13 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-13 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 2e-13 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-13 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 3e-13 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-13 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 3e-13 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 3e-13 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 3e-13 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-13 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 4e-13 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 4e-13 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 5e-13 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 5e-13 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 5e-13 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 1e-12 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 1e-12 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-12 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 1e-12 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 1e-12 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 1e-12 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 2e-12 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 2e-12 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-12 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-12 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-12 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-12 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-12 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 2e-12 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 2e-12 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-12 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-12 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-12 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 2e-12 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 2e-12 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-12 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-12 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 2e-12 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-12 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-12 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-12 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-12 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-12 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-12 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-12 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 2e-12 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-12 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 3e-12 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 3e-12 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 3e-12 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 3e-12 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-12 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 3e-12 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 3e-12 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 3e-12 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 3e-12 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-12 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 3e-12 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-12 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-12 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 3e-12 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-12 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-12 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-12 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 4e-12 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-12 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 4e-12 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 4e-12 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 4e-12 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 4e-12 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 4e-12 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-12 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 4e-12 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 5e-12 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 5e-12 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 5e-12 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 5e-12 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 5e-12 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 5e-12 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 6e-12 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 6e-12 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 6e-12 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 6e-12 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 7e-12 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 7e-12 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 7e-12 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 7e-12 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-12 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 7e-12 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 8e-12 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 8e-12 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 8e-12 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 8e-12 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 9e-12 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-11 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 1e-11 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-11 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-11 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 1e-11 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-11 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-11 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-11 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-11 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-11 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 1e-11 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-11 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-11 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-11 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-11 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-11 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-11 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-11 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-11 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-11 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-11 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-11 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-11 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-11 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-11 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 3e-11 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 3e-11 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 3e-11 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 3e-11 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 3e-11 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 3e-11 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 4e-11 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 4e-11 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 4e-11 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 4e-11 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 6e-11 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 6e-11 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 6e-11 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 7e-11 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 8e-11 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 9e-11 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 2e-10 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-10 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-10 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 3e-10 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 3e-10 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-10 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-10 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 4e-10 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 4e-10 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 4e-10 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 4e-10 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 6e-10 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 6e-10 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 6e-10 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 7e-10 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 7e-10 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 9e-10 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 1e-09 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 1e-09 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 1e-09 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 1e-09 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 1e-09 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-09 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-09 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 2e-09 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 2e-09 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 2e-09 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 2e-09 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 2e-09 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-09 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 2e-09 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 2e-09 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 3e-09 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 3e-09 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 4e-09 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-09 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-09 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 4e-09 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 4e-09 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 4e-09 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 5e-09 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 5e-09 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 6e-09 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 6e-09 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 7e-09 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 7e-09 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 7e-09 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 7e-09 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 7e-09 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 8e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 8e-09 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 8e-09 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 8e-09 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 8e-09 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-09 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 8e-09 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 8e-09 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 9e-09 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 9e-09 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 9e-09 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 9e-09 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 9e-09 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 9e-09 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 9e-09 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 9e-09 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 9e-09 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 9e-09 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 9e-09 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 1e-08 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 1e-08 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-08 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 1e-08 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-08 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 1e-08 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 1e-08 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-08 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 1e-08 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 1e-08 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 1e-08 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 1e-08 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 1e-08 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 1e-08 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 1e-08 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 1e-08 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-08 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 1e-08 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-08 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 1e-08 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-08 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 1e-08 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-08 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 2e-08 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 2e-08 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 2e-08 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 2e-08 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-08 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 2e-08 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-08 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-08 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 2e-08 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 2e-08 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-08 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 2e-08 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-08 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-08 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-08 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-08 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 2e-08 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-08 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-08 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 2e-08 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-08 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-08 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 3e-08 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-08 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-08 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 3e-08 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 3e-08 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-08 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 3e-08 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 4e-08 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 4e-08 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 4e-08 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 5e-08 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 5e-08 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 5e-08 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 5e-08 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-08 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 6e-08 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 6e-08 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 8e-08 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-08 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 9e-08 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 9e-08 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 9e-08 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 1e-07 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 1e-07 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-07 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-07 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-07 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-07 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-07 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 2e-07 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 2e-07 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 2e-07 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 2e-07 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 2e-07 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 3e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 5e-07 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 5e-07 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 6e-07 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 9e-07 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 9e-07 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 9e-07 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 9e-07 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-06 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 1e-06 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 1e-06 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-06 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 2e-06 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-06 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 2e-06 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-06 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-06 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 2e-06 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 2e-06 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 2e-06 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-06 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-06 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-06 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 2e-06 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 2e-06 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 2e-06 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 2e-06 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 2e-06 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 2e-06 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 2e-06 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 2e-06 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-06 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 2e-06 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 2e-06 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 2e-06 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 2e-06 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-06 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-06 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 2e-06 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-06 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 3e-06 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 3e-06 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 3e-06 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 3e-06 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-06 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 3e-06 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 3e-06 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 3e-06 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 3e-06 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 4e-06 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 4e-06 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 4e-06 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 5e-06 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-06 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 5e-06 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 5e-06 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 5e-06 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-06 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 5e-06 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-06 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 5e-06 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 6e-06 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 6e-06 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-06 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 6e-06 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-06 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 7e-06 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-06 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 8e-06 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 8e-06 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-05 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 1e-05 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-05 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 1e-05 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 1e-05 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-05 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 1e-05 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 1e-05 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 1e-05 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 1e-05 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 1e-05 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 1e-05 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 1e-05 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-05 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 2e-05 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-05 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 2e-05 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 2e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 2e-05 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-05 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 3e-05 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 3e-05 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-05 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 3e-05 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-05 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 3e-05 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 3e-05 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 3e-05 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-05 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 3e-05 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 3e-05 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 3e-05 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 3e-05 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 3e-05 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 3e-05 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 3e-05 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 3e-05 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 3e-05 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 4e-05 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 5e-05 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 5e-05 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 5e-05 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 6e-05 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 7e-05 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 7e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 8e-05 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 8e-05 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 8e-05 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 8e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 9e-05 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 1e-04 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-04 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 1e-04 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-04 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 1e-04 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 1e-04 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-04 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 1e-04 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 1e-04 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 1e-04 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 2e-04 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 2e-04 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 2e-04 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 2e-04 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 2e-04 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 2e-04 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-04 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-04 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-04 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 2e-04 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 2e-04 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 2e-04 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-04 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 2e-04 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 2e-04 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-04 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 2e-04 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 2e-04 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-04 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-04 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 2e-04 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 2e-04 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-04 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 3e-04 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-04 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 3e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-04 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 3e-04 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 3e-04 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 3e-04 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-04 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 4e-04 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 4e-04 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 4e-04 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 5e-04 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 6e-04 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 6e-04 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 7e-04 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 7e-04 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 7e-04 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 7e-04 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 8e-04 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-04 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 346 bits (891), Expect = e-113
Identities = 92/301 (30%), Positives = 137/301 (45%), Gaps = 37/301 (12%)
Query: 506 KSKDSSLPLFSFASVTAATENFS------IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSN 559
+ D+ FSF + T NF +K+GEGGFG VYKG + N VAVK+L+
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 560 ----QSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP 615
+ + ++F E+ ++AK QH NLV LLG + + L+Y YM N SL L
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 616 TKKHLLGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFG 653
L W +R +I G A D+ KISDFG+AR
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 654 GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFN 713
T RIVGT YM+PE L G + KSD++SFGV++LEI++ + +
Sbjct: 185 KFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQL 242
Query: 714 LLGHAWSLCKNDRA-HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
LL + ++ + +D + N+ + +VA C+ E RP + V ++
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 773 N 773
Sbjct: 302 Q 302
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 334 bits (859), Expect = e-108
Identities = 99/287 (34%), Positives = 148/287 (51%), Gaps = 31/287 (10%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLK-EFKNEMM 573
FS + A++NFS ++ LG GGFG VYKGRL +G VAVKRL + QG + +F+ E+
Sbjct: 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL-LGWQLRVRIIDG 632
+I+ HRNL+RL G C+ E++L+Y YM N S+ L + + L W R RI G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 633 IAQ-------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
A+ D+ + DFG+A++ + T + GT
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGT 198
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT---GVYNTDSFNLLGHAWSLCKN 724
G+++PEY G S K+DVF +GV++LE+++ ++ + N D LL L K
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771
+ L+D LQ + + I VALLC Q + +RP MS+VV M
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 313 bits (804), Expect = e-100
Identities = 89/286 (31%), Positives = 152/286 (53%), Gaps = 24/286 (8%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMML 574
+ AT NF + +G G FG VYKG L +G +VA+KR + +S QG++EF+ E+
Sbjct: 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL-LGWQLRVRIIDGI 633
++ +H +LV L+G C E+ E ILIY+YM N +L L+ + + W+ R+ I G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 634 AQ----------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
A+ D++ PKI+DFG+++ + + + GT GY+
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYI 208
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYN-TDSFNLLGHAWSLCKNDRAHEL 730
PEY ++G + KSDV+SFGV++ E+L ++ + NL A N + ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
+DP L +++ L ++ + A+ C+ ++EDRP+M DV+ + L
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 236 bits (605), Expect = 2e-71
Identities = 62/320 (19%), Positives = 111/320 (34%), Gaps = 54/320 (16%)
Query: 503 GKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG 562
G SS ++ + + G FG V+K +L + VAVK Q
Sbjct: 2 GHHHHHHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDK 60
Query: 563 QGLKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEKILIYEYMVNKSLDVFLFDPTKK 618
Q + + E+ + ++H N+++ +G + LI + SL FL K
Sbjct: 61 QS-WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KA 115
Query: 619 HLLGWQLRVRIIDGIAQ--------------------------------DQHMNPKISDF 646
+++ W I + +A+ ++ I+DF
Sbjct: 116 NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175
Query: 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-----FSVKSDVFSFGVLMLEILSSK 701
G+A F + G+T VGT YM+PE + ++ D+++ G+++ E+ S
Sbjct: 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235
Query: 702 KNTGV----YNTDSFNLLGHAWSLCKNDRA--HELMDPVLQNEV-SLPMLVRYINVALLC 754
Y +G SL H+ PVL++ + C
Sbjct: 236 TAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEEC 295
Query: 755 VQENAEDRPTMSDVVSMINN 774
+AE R + V I
Sbjct: 296 WDHDAEARLSAGCVGERITQ 315
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 7e-60
Identities = 59/334 (17%), Positives = 107/334 (32%), Gaps = 67/334 (20%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMML 574
+ + + +N + +G G +G VYKG L+ + VAVK S + Q K +
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGS-LDERPVAVKVFSFANRQNFINEK-NIYR 60
Query: 575 IAKLQHRNLVRLLGCCIE-----QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI 629
+ ++H N+ R + + E +L+ EY N SL +L H W R+
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRL 116
Query: 630 IDGIAQ-------------------------------DQHMNPKISDFGMARMFGG---- 654
+ + ISDFG++ G
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 655 --DELQGNTKRIVGTYGYMSPEYALEGVFSV--------KSDVFSFGVLMLEILSSKKNT 704
E VGT YM+PE LEG ++ + D+++ G++ EI +
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235
Query: 705 GVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM----------LVRYINVALLC 754
+ + + + ++ V + + + C
Sbjct: 236 FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDC 295
Query: 755 VQENAEDRPTMSDVVSMINNELFNLPSPKEPPFT 788
++AE R T + + K T
Sbjct: 296 WDQDAEARLTAQXAEERMAELMMIWERNKSVSPT 329
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 3e-43
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 49/287 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ ++ +G G FG V K + ++VA+K++ ++S K F E+ ++++ H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIV 64
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L G C+ L+ EY SL L + +Q
Sbjct: 65 KLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 636 -----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
KI DFG A ++Q + G+ +M+PE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEG 177
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
+S K DVFS+G+++ E+++ +K ++ W++ R P L
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRK---PFDEIGGPAFRIMWAVHNGTR------PPLIKN 228
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785
+ + + C ++ RP+M ++V ++ + + P EP
Sbjct: 229 LP-KPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 1e-42
Identities = 55/308 (17%), Positives = 99/308 (32%), Gaps = 72/308 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+ LG+G FG K G+ + +K L + + F E+ ++ L+H N+
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
++ +G + I EY+ +L + + W RV IA
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLHSM 127
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKR------------IVGTYG 669
++ N ++DFG+AR+ ++ Q R +VG
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729
+M+PE + K DVFSFG+++ EI+ A
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV------------------------NADP 223
Query: 730 LMDPV-----LQNEVSLPMLV------RYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
P L L + + + C + E RP+ + + +
Sbjct: 224 DYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283
Query: 779 LPSPKEPP 786
L
Sbjct: 284 LAGHLPLG 291
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 2e-42
Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 45/277 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRN 582
+ +I+ K+G G FG V++ +G +VAVK L Q + + EF E+ ++ +L+H N
Sbjct: 37 CDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+V +G + ++ EY+ SL L + L + R+ + +A+
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 636 -----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
D+ K+ DFG++R+ L +K GT +M+PE +
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRD 213
Query: 679 GVFSVKSDVFSFGVLMLEILSSKK-NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
+ KSDV+SFGV++ E+ + ++ + +G K R +
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-----KCKR------LEIPR 262
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
++ P + I C RP+ + ++ ++
Sbjct: 263 NLN-PQVAAIIE---GCWTNEPWKRPSFATIMDLLRP 295
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 4e-41
Identities = 55/278 (19%), Positives = 116/278 (41%), Gaps = 44/278 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRN 582
++ ++G G FG VYKG+ +G +VAVK L+ + Q L+ FKNE+ ++ K +H N
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
++ +G I + ++ SL L K + + I A+
Sbjct: 82 ILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHA 138
Query: 636 ---------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE---YAL 677
+ KI DFG+A +++ G+ +M+PE
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKK-NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
+S +SDV++FG+++ E+++ + + + N D + + + +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSL----SPDLSK 249
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ P ++ + C+++ ++RP+ +++ I
Sbjct: 250 VRSNCPKRMKRL--MAECLKKKRDERPSFPRILAEIEE 285
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 8e-41
Identities = 59/289 (20%), Positives = 124/289 (42%), Gaps = 60/289 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQG-------LKEFKNEMMLIA 576
+ ++G+GGFG V+KGRL+ + VA+K L +G +EF+ E+ +++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI------- 629
L H N+V+L G ++ E++ L L D K H + W +++R+
Sbjct: 79 NLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALG 134
Query: 630 ----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
+ + ++ + K++DFG+++ + + ++G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGN 189
Query: 668 YGYMSPE--YALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725
+ +M+PE A E ++ K+D +SF +++ IL+ + ++ S+ + + +
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG---PFDEYSYGKIKFINMIREEG 246
Query: 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
P + + P L I LC + + RP S +V ++
Sbjct: 247 LR-----PTIPEDCP-PRLRNVIE---LCWSGDPKKRPHFSYIVKELSE 286
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 1e-38
Identities = 53/282 (18%), Positives = 106/282 (37%), Gaps = 56/282 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRN 582
+ + +KL E G ++KGR G ++ VK L + S + ++F E + H N
Sbjct: 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 583 LVRLLGCCIEQGEKIL--IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
++ +LG C I +M SL L + T ++ V+ +A+
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFL 127
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
D+ M +IS + F + + +++PE A
Sbjct: 128 HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF-------QSPGRMYAPAWVAPE-A 179
Query: 677 LEG----VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732
L+ +D++SF VL+ E+++ + + S +G + R
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWELVTREV---PFADLSNMEIGMKV-ALEGLR------ 229
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
P + +S P + + + +C+ E+ RP +V ++
Sbjct: 230 PTIPPGIS-PHVSKLMK---ICMNEDPAKRPKFDMIVPILEK 267
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 6e-38
Identities = 60/291 (20%), Positives = 109/291 (37%), Gaps = 68/291 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRL----SNQSGQGLKEFKNEMMLIAKLQH 580
+++ +G GGFG VY+ G EVAVK Q ++ + E L A L+H
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
N++ L G C+++ L+ E+ L+ L + + V IA+
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYL 121
Query: 636 ----------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
+ KI+DFG+AR + G
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA----GA 177
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
Y +M+PE +FS SDV+S+GVL+ E+L+ + + +
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV---PF---------------RGIDG 219
Query: 728 HELMDPVLQNEVSLPM----LVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ V N+++LP+ + + C + RP+ ++++ +
Sbjct: 220 LAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 4e-37
Identities = 59/296 (19%), Positives = 109/296 (36%), Gaps = 53/296 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRN 582
E I +G+G FG VY GR +G EVA++ + + + LK FK E+M + +H N
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRW-HG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHEN 90
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+V +G C+ +I ++L + D L +I I +
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV--LDVNKTRQIAQEIVKGMGYLHA 148
Query: 636 ------D--------QHMNPKISDFGMARMFGGDELQGNTKRI---VGTYGYMSPE---- 674
D + I+DFG+ + G + ++ G +++PE
Sbjct: 149 KGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 675 -----YALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729
+ FS SDVF+ G + E+ + + W + +
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELH-----AREWPFKTQPAEAIIWQMGTGMK--- 260
Query: 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785
P L +++ + + ++ L C E+RPT + ++ M+ P
Sbjct: 261 ---PNL-SQIGMGKEIS--DILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHP 310
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 8e-36
Identities = 56/307 (18%), Positives = 105/307 (34%), Gaps = 70/307 (22%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNE--MMLIAKLQHR 581
+ ++ +G+G +G V++G G+ VAVK S++ K + E + L+H
Sbjct: 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHE 62
Query: 582 NLVRLLGCCIEQGEKI----LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
N++ + + LI Y SL +L + L +RI+ IA
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGL 118
Query: 636 ----------------------------DQHMNPKISDFGMARMF--GGDELQGNTKRIV 665
++ I+D G+A M ++L V
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 666 GTYGYMSPE------YALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS---FNLLG 716
GT YM+PE + D+++FG+++ E+ + G+ ++++
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238
Query: 717 HAWSLC--------KNDRAHELMDPVLQNEV-SLPMLVRYINVALLCVQENAEDRPTMSD 767
+ S R P + N S P L + C +N R T
Sbjct: 239 NDPSFEDMRKVVCVDQQR------PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALR 292
Query: 768 VVSMINN 774
+ +
Sbjct: 293 IKKTLTK 299
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 8e-36
Identities = 70/304 (23%), Positives = 118/304 (38%), Gaps = 81/304 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG------QEVAVKRLSNQSGQGLKEFKNEMMLIAKL 578
+ ++ +LGEG FG V+ N VAVK L + + K+F+ E L+ L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------------FDPTKKHLLGWQL 625
QH ++V+ G C + I+++EYM + L+ FL K LG
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 626 RVRIIDGIAQ----------------------DQHMNPKISDFGMAR-MFGGD--ELQGN 660
+ I IA ++ KI DFGM+R ++ D + G+
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 661 TK---RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLL 715
T R +M PE + F+ +SDV+SFGV++ EI + K + NT+ +
Sbjct: 195 TMLPIR------WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 248
Query: 716 GHAWSL-----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770
L C +++M L C Q + R + ++
Sbjct: 249 TQGRVLERPRVCP-KEVYDVM--------------------LGCWQREPQQRLNIKEIYK 287
Query: 771 MINN 774
+++
Sbjct: 288 ILHA 291
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-35
Identities = 59/282 (20%), Positives = 102/282 (36%), Gaps = 56/282 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRN 582
E+ + ++G G FG V+ GRL + VAVK +F E ++ + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+VRL+G C ++ ++ E + FL T+ L + ++++ A
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 636 ---------------DQHMNPKISDFGMARMFGGDE--LQGNTKRIVGTYGYMSPEYALE 678
+ KISDFGM+R G +++ + +PE
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV--PVKWTAPEALNY 289
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMD 732
G +S +SDV+SFG+L+ E S + + N + + L D LM
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLM- 348
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C RP+ S + + +
Sbjct: 349 -------------------EQCWAYEPGQRPSFSTIYQELQS 371
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 2e-35
Identities = 73/297 (24%), Positives = 110/297 (37%), Gaps = 76/297 (25%)
Query: 528 SIQSKLGEGGFGPVYKGRLLNG----QEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRN 582
+G G FG VY G LL+ AVK L + +F E +++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 583 LVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL----FDPTKKHLLGWQLRVRIIDGIAQ-- 635
++ LLG C+ L + YM + L F+ +PT K L+G+ L +A+
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL------QVAKGM 141
Query: 636 --------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG------ 669
D+ K++DFG+AR D + G
Sbjct: 142 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK 197
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----C 722
+M+ E F+ KSDV+SFGVL+ E+++ V D L L C
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 257
Query: 723 KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779
D +E+M L C AE RP+ S++VS I+
Sbjct: 258 P-DPLYEVM--------------------LKCWHPKAEMRPSFSELVSRISAIFSTF 293
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-35
Identities = 80/305 (26%), Positives = 116/305 (38%), Gaps = 82/305 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG------QEVAVKRL-SNQSGQGLKEFKNEMMLIAK 577
+LGE FG VYKG L Q VA+K L G +EF++E ML A+
Sbjct: 9 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------------FDPTKKHLLGWQ 624
LQH N+V LLG + +I+ Y + L FL D T K L
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 625 LRVRIIDGIAQ----------------------DQHMNPKISDFGMAR-MFGGD--ELQG 659
V ++ IA +N KISD G+ R ++ D +L G
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 660 NTK---RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNL 714
N+ R +M+PE + G FS+ SD++S+GV++ E+ S G N D +
Sbjct: 189 NSLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 242
Query: 715 LGHAWSL-----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
+ + L C + LM + C E RP D+
Sbjct: 243 IRNRQVLPCPDDCP-AWVYALM--------------------IECWNEFPSRRPRFKDIH 281
Query: 770 SMINN 774
S +
Sbjct: 282 SRLRA 286
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 3e-35
Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 81/311 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE------VAVKRLSNQSGQGLKEFKNEMMLIAKL 578
+ ++ +LGEG FG V+ N VAVK L S ++F+ E L+ L
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------------FDPTKKHLLGWQLR 626
QH+++VR G C E ++++EYM + L+ FL + LG
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 627 VRIIDGIAQ----------------------DQHMNPKISDFGMAR-MFGGD--ELQGNT 661
+ + +A Q + KI DFGM+R ++ D + G T
Sbjct: 161 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 662 K---RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLG 716
R +M PE L F+ +SDV+SFGV++ EI + K + NT++ + +
Sbjct: 221 MLPIR------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274
Query: 717 HAWSL-----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771
L C + +M C Q + R ++ DV +
Sbjct: 275 QGRELERPRACP-PEVYAIM--------------------RGCWQREPQQRHSIKDVHAR 313
Query: 772 INNELFNLPSP 782
+ L P
Sbjct: 314 L-QALAQAPPV 323
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 4e-35
Identities = 54/301 (17%), Positives = 102/301 (33%), Gaps = 60/301 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNE--MMLIAKLQHRN 582
+ + ++G+G +G V+ G+ G++VAVK + E + ++H N
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHEN 92
Query: 583 LVRLLGCCIEQGEKI----LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--- 635
++ + I+ LI +Y N SL +L K L + +++
Sbjct: 93 ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLC 148
Query: 636 ---------------------------DQHMNPKISDFGMARMF--GGDELQGNTKRIVG 666
++ I+D G+A F +E+ VG
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208
Query: 667 TYGYMSPEYALEGVFSV-------KSDVFSFGVLMLEILSSKKNTGV---YNTDSFNLLG 716
T YM PE L+ + +D++SFG+++ E+ + G+ Y +L+
Sbjct: 209 TKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267
Query: 717 HAWSLCKNDRA--HELMDPVL-QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773
S + + P S L + + C N R T V +
Sbjct: 268 SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327
Query: 774 N 774
Sbjct: 328 K 328
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 4e-35
Identities = 80/295 (27%), Positives = 123/295 (41%), Gaps = 61/295 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
RL ++ I I EYM N SL FL P+ L +L + + IA+
Sbjct: 72 RLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGIKLTINKL-LDMAAQIAEGMAFIEERN 129
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY--MSPEYALEGV 680
++ KI+DFG+AR+ +E T R + +PE G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGT 186
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHELMDP 733
F++KSDV+SFG+L+ EI++ + G+ N + L + + C + ++LM
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP-EELYQLM-- 243
Query: 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSP--KEPP 786
LC +E EDRPT + S++ + F + P
Sbjct: 244 ------------------RLCWKERPEDRPTFDYLRSVL-EDFFTATEGQYQPQP 279
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 6e-35
Identities = 61/286 (21%), Positives = 106/286 (37%), Gaps = 72/286 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G+G FG V G G +VAVK + ++ + F E ++ +L+H NLV
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 77
Query: 585 RLLGCCIEQGEKILI-YEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+LLG +E+ + I EYM SL +L + L G L ++ + +
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-LKFSLDVCEAMEYLEGN 136
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG------YMSPEY 675
+ K+SDFG+ + + + +PE
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EA-------SSTQDTGKLPVKWTAPEA 185
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAH 728
E FS KSDV+SFG+L+ EI S + + D + + + C +
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP-PAVY 244
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
E+M C +A RP+ + + +
Sbjct: 245 EVM--------------------KNCWHLDAAMRPSFLQLREQLEH 270
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 6e-35
Identities = 68/331 (20%), Positives = 118/331 (35%), Gaps = 92/331 (27%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ 579
+ S+LG+G FG V R G VAVK+L + ++F+ E+ ++ L
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 580 HRNLVRLLGCCIEQGEK--ILIYEYMVNKSLDVFLFDP----TKKHLLGW--QLRVRIID 631
+V+ G G + L+ EY+ + L FL LL + Q I
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ----ICK 138
Query: 632 G--------------------IAQDQHMNPKISDFGMARMFGGDE----LQGNTK---RI 664
G + + H+ KI+DFG+A++ D+ ++ +
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHV--KIADFGLAKLLPLDKDYYVVREPGQSPIF- 195
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS----------------SKKNTGVYN 708
+ +PE + +FS +SDV+SFGV++ E+ + +
Sbjct: 196 -----WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL 250
Query: 709 TDSFNLLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
+ LL L HELM LC + +DRP+
Sbjct: 251 SRLLELLEEGQRLPAPPACPAEVHELM--------------------KLCWAPSPQDRPS 290
Query: 765 MSDVVSMINNELFNLPSPKEPPFTTFTKGKN 795
S + ++ + FT +GK+
Sbjct: 291 FSALGPQLDMLWSGSRGCETHAFTAHPEGKH 321
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 8e-35
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 55/292 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ 579
+ +LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQ
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 580 HRNLVRLLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
H N+V+ G C G + LI EY+ SL +L K + ++ I +
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 127
Query: 636 --------------------DQHMNPKISDFGMARMFGGDE----LQGNTK---RIVGTY 668
+ KI DFG+ ++ D+ ++ +
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF----- 182
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA-WSLCKNDRA 727
+ +PE E FSV SDV+SFGV++ E+ + + + + ++G+
Sbjct: 183 -WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV--- 238
Query: 728 HELMDPVLQNE-----VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L++ + N P + Y + C N RP+ D+ ++
Sbjct: 239 FHLIELLKNNGRLPRPDGCPDEI-Y-MIMTECWNNNVNQRPSFRDLALRVDQ 288
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 9e-35
Identities = 66/303 (21%), Positives = 113/303 (37%), Gaps = 58/303 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN-----GQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL 578
LGEG FG V G+ VAVK L ++ Q +K E+ ++ L
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90
Query: 579 QHRNLVRLLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ- 635
H ++++ GCC + G L+ EY+ SL +L +H +G + I +
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEG 146
Query: 636 ---------------------DQHMNPKISDFGMARMFGGDE----LQGNTK---RIVGT 667
D KI DFG+A+ ++ +
Sbjct: 147 MAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF---- 202
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ +PE E F SDV+SFGV + E+L+ ++ T L+G A
Sbjct: 203 --WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV--- 257
Query: 728 HELMDPVLQNEVSLPMLVR-----YINVALLCVQENAEDRPTMSDVVSMINNELFNLPSP 782
L + + + E LP + Y ++ C + A RPT +++ ++ +
Sbjct: 258 LRLTELLERGER-LPRPDKCPAEVY-HLMKNCWETEASFRPTFENLIPIL-KTVHEKYQG 314
Query: 783 KEP 785
+ P
Sbjct: 315 QAP 317
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 9e-35
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 59/292 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG-QEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+ +++ KLG G +G VY+G VAVK L + ++EF E ++ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
V+LLG C + +I E+M +L +L + ++ + L + + I+
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-LYMATQISSAMEYLEKK 130
Query: 636 --------------DQHMNPKISDFGMARMFGGDE--LQGNTKRIVGTYGYMSPEYALEG 679
++ K++DFG++R+ GD K + + +PE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYN 187
Query: 680 VFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHELMD 732
FS+KSDV++FGVL+ EI + + G+ + + LL + + C ++ +ELM
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP-EKVYELM- 245
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKE 784
C Q N DRP+ +++ +F S +
Sbjct: 246 -------------------RACWQWNPSDRPSFAEIHQAF-ETMFQESSISD 277
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 1e-34
Identities = 64/292 (21%), Positives = 116/292 (39%), Gaps = 55/292 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ 579
+ +LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQ
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100
Query: 580 HRNLVRLLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
H N+V+ G C G + LI EY+ SL +L K + ++ I +
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 158
Query: 636 --------------------DQHMNPKISDFGMARMFGGDE----LQGNTK---RIVGTY 668
+ KI DFG+ ++ D+ ++ +
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF----- 213
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA-WSLCKNDRA 727
+ +PE E FSV SDV+SFGV++ E+ + + + + ++G+
Sbjct: 214 -WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV--- 269
Query: 728 HELMDPVLQNEVSLPMLVR-----YINVALLCVQENAEDRPTMSDVVSMINN 774
L++ + N LP Y + C N RP+ D+ ++
Sbjct: 270 FHLIELLKNNGR-LPRPDGCPDEIY-MIMTECWNNNVNQRPSFRDLALRVDQ 319
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 1e-34
Identities = 69/312 (22%), Positives = 112/312 (35%), Gaps = 77/312 (24%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG------QEVAVKRL-SNQSGQGLKEFKNEMMLIAK 577
+N ++ LG G FG VY+G++ +VAVK L S Q +F E ++I+K
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQD- 636
H+N+VR +G ++ + ++ E M L FL + + L + + +A+D
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 637 ----------------------------QHMNPKISDFGMAR-MFGGD--ELQGNTK--- 662
KI DFGMAR ++ G
Sbjct: 150 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWS 720
+ +M PE +EG+F+ K+D +SFGVL+ EI S N + +
Sbjct: 210 K------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 263
Query: 721 L-----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ C + +M C Q EDRP + ++ I
Sbjct: 264 MDPPKNCP-GPVYRIM--------------------TQCWQHQPEDRPNFAIILERIEY- 301
Query: 776 LFNLPSPKEPPF 787
P
Sbjct: 302 CTQDPDVINTAL 313
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-34
Identities = 74/306 (24%), Positives = 121/306 (39%), Gaps = 78/306 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE----VAVKRL--SNQSGQGLKEFKNEMMLIAKL 578
+ LGEG FG V +G L VAVK + N S + ++EF +E +
Sbjct: 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93
Query: 579 QHRNLVRLLGCCIEQG-----EKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRVRI 629
H N++RLLG CIE + ++I +M L +L + KH+ L ++
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL-LKF 152
Query: 630 IDGIAQ----------------------DQHMNPKISDFGMAR-MFGGD--ELQGNTK-- 662
+ IA M ++DFG+++ ++ GD K
Sbjct: 153 MVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 663 -RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAW 719
+ +++ E + V++ KSDV++FGV M EI + GV N + ++ L H
Sbjct: 213 VK------WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266
Query: 720 SL-----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L C D +E+M C + + DRPT S + +
Sbjct: 267 RLKQPEDCL-DELYEIM--------------------YSCWRTDPLDRPTFSVLRLQLEK 305
Query: 775 ELFNLP 780
L +LP
Sbjct: 306 LLESLP 311
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 3e-34
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 59/288 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
++ + +LG G FG V G+ +VA+K + + EF E ++ L H LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLV 82
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L G C +Q +I EYM N L +L + + QL + + + +
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQL-LEMCKDVCEAMEYLESKQ 140
Query: 636 -------------DQHMNPKISDFGMARMFGGDE--LQGNTKRIVGTYGYMSPEYALEGV 680
+ K+SDFG++R DE +K V + PE +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV---RWSPPEVLMYSK 197
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHELMDP 733
FS KSD+++FGVLM EI S K N+++ + L +++ + +M
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA-SEKVYTIM-- 254
Query: 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781
C E A++RPT ++S I ++ + S
Sbjct: 255 ------------------YSCWHEKADERPTFKILLSNI-LDVMDEES 283
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 4e-34
Identities = 69/312 (22%), Positives = 113/312 (36%), Gaps = 77/312 (24%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG------QEVAVKRL-SNQSGQGLKEFKNEMMLIAK 577
+N ++ LG G FG VY+G++ +VAVK L S Q +F E ++I+K
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQD- 636
H+N+VR +G ++ + ++ E M L FL + + L + + +A+D
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 637 ----------------------------QHMNPKISDFGMAR-MFGGD--ELQGNTK--- 662
KI DFGMAR ++ G
Sbjct: 191 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWS 720
+ +M PE +EG+F+ K+D +SFGVL+ EI S N + +
Sbjct: 251 K------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 304
Query: 721 L-----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ C + +M C Q EDRP + ++ I
Sbjct: 305 MDPPKNCP-GPVYRIM--------------------TQCWQHQPEDRPNFAIILERIEYC 343
Query: 776 LFNLPSPKEPPF 787
+ P
Sbjct: 344 TQD-PDVINTAL 354
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 5e-34
Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 57/291 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+ +++ KLG G +G VY+G VAVK L + ++EF E ++ +++H NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 278
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
V+LLG C + +I E+M +L +L + ++ + L + + I+
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-LYMATQISSAMEYLEKK 337
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY--MSPEYALEG 679
++ K++DFG++R+ GD T + +PE
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPIKWTAPESLAYN 394
Query: 680 VFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDP 733
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM-- 452
Query: 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKE 784
C Q N DRP+ +++ +F S +
Sbjct: 453 ------------------RACWQWNPSDRPSFAEIHQAF-ETMFQESSISD 484
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 5e-34
Identities = 67/289 (23%), Positives = 115/289 (39%), Gaps = 59/289 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG G FG V+ +VAVK + ++ F E ++ LQH LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L ++ I I E+M SL FL +L + IA+
Sbjct: 247 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKL-IDFSAQIAEGMAFIEQRN 304
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY--MSPEYALEGV 680
+ KI+DFG+AR+ +E T R + +PE G
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGS 361
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLL--GH---AWSLCKNDRAHELMDP 733
F++KSDV+SFG+L++EI++ + G+ N + L G+ C + + +M
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCP-EELYNIM-- 418
Query: 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSP 782
+ C + E+RPT + S++ ++ +
Sbjct: 419 ------------------MRCWKNRPEERPTFEYIQSVL-DDFYTATES 448
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 6e-34
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 60/280 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G+G FG V G G +VAVK + ++ + F E ++ +L+H NLV
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 249
Query: 585 RLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+LLG +E+ + ++ EYM SL +L + L G L ++ + +
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-LKFSLDVCEAMEYLEGN 308
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ K+SDFG+ + Q K V + +PE E F
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTGKLPVK---WTAPEALREKKF 363
Query: 682 SVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHELMDPV 734
S KSDV+SFG+L+ EI S + + D + + + C +++M
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP-PAVYDVM--- 419
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +A RPT + + +
Sbjct: 420 -----------------KNCWHLDAATRPTFLQLREQLEH 442
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 7e-34
Identities = 73/296 (24%), Positives = 110/296 (37%), Gaps = 74/296 (25%)
Query: 528 SIQSKLGEGGFGPVYKGRLLNG----QEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRN 582
+G G FG VY G LL+ AVK L + +F E +++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 583 LVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL----FDPTKKHLLGWQLRVRIIDGIAQ-- 635
++ LLG C+ L + YM + L F+ +PT K L+G+ L +A+
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL------QVAKGM 205
Query: 636 --------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG-----Y 670
D+ K++DFG+AR E + T +
Sbjct: 206 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK---TGAKLPVKW 262
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CK 723
M+ E F+ KSDV+SFGVL+ E+++ V D L L C
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 322
Query: 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779
D +E+M L C AE RP+ S++VS I+
Sbjct: 323 -DPLYEVM--------------------LKCWHPKAEMRPSFSELVSRISAIFSTF 357
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 8e-34
Identities = 67/281 (23%), Positives = 110/281 (39%), Gaps = 58/281 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ ++G G FG V+ G LN +VA+K + + ++F E ++ KL H LV
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L G C+EQ L+ E+M + L +L + L + + + +
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETL-LGMCLDVCEGMAYLEEAC 124
Query: 636 -------------DQHMNPKISDFGMARMFGGDE--LQGNTKRIVGTYGYMSPEYALEGV 680
++ K+SDFGM R D+ TK V + SPE
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV---KWASPEVFSFSR 181
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHELMDP 733
+S KSDV+SFGVLM E+ S K N++ + + L + +++M
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA-STHVYQIM-- 238
Query: 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +E EDRP S ++ +
Sbjct: 239 ------------------NHCWRERPEDRPAFSRLLRQLAE 261
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-33
Identities = 70/309 (22%), Positives = 118/309 (38%), Gaps = 81/309 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKL-Q 579
+ Q +GEG FG V K R+ A+KR+ S ++F E+ ++ KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--------------FDPTKKHLLGWQL 625
H N++ LLG C +G L EY + +L FL + T L QL
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 626 RVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGNTK- 662
+ +A+ ++ KI+DFG++R G + T
Sbjct: 145 -LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG 201
Query: 663 ----RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLG 716
R +M+ E V++ SDV+S+GVL+ EI+S G+ + + L
Sbjct: 202 RLPVR------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 255
Query: 717 HAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ L K +D ++LM C +E +RP+ + ++ +
Sbjct: 256 QGYRLEKPLNCDDEVYDLM--------------------RQCWREKPYERPSFAQILVSL 295
Query: 773 NNELFNLPS 781
N L +
Sbjct: 296 NRMLEERKT 304
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 1e-33
Identities = 59/291 (20%), Positives = 110/291 (37%), Gaps = 55/291 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL 578
LGEG FG V R G++VAVK L G + + K E+ ++ L
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 579 QHRNLVRLLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ- 635
H N+V+ G C E G LI E++ + SL +L P K+ + + +++ I +
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKG 138
Query: 636 ---------------------DQHMNPKISDFGMARMFGGDE----LQGNTK---RIVGT 667
+ KI DFG+ + D+ ++ +
Sbjct: 139 MDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVF---- 194
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ +PE ++ F + SDV+SFGV + E+L+ + ++G
Sbjct: 195 --WYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV--- 249
Query: 728 HELMDPVLQNEVSLPMLVR-----YINVALLCVQENAEDRPTMSDVVSMIN 773
L++ + + + LP Y + C + +R + +++
Sbjct: 250 TRLVNTLKEGKR-LPCPPNCPDEVY-QLMRKCWEFQPSNRTSFQNLIEGFE 298
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 1e-33
Identities = 58/289 (20%), Positives = 103/289 (35%), Gaps = 60/289 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAKLQ 579
+G+G FG VY G ++ + A+K L Q ++ F E +L+ L
Sbjct: 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 580 HRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--- 635
H N++ L+G + + YM + L F+ P +++ L + +A+
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP-QRNPTVKDL-ISFGLQVARGME 138
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTY--GYMSPE 674
D+ K++DFG+AR E + + + E
Sbjct: 139 YLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRA 727
F+ KSDV+SFGVL+ E+L+ + D + L L C D
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCP-DSL 257
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
+++M C + + RPT +V + +
Sbjct: 258 YQVM--------------------QQCWEADPAVRPTFRVLVGEVEQIV 286
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 65/314 (20%), Positives = 121/314 (38%), Gaps = 73/314 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG----QEVAVKRL--SNQSGQGLKEFKNEMMLIAKL 578
+ F++ LG+G FG V + +L +VAVK L + ++EF E + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 579 QHRNLVRLLGCCIEQGEKI------LIYEYMVNKSLDVFL----FDPTKKHLLGWQLRVR 628
H ++ +L+G + K +I +M + L FL +L L VR
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL-VR 141
Query: 629 IIDGIAQ----------------------DQHMNPKISDFGMAR-MFGGD--ELQGNTKR 663
+ IA + M ++DFG++R ++ GD +K
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL 721
V +++ E + +++V SDV++FGV M EI++ + G+ N + +N L L
Sbjct: 202 PV---KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL 258
Query: 722 -----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
C + ++LM C + + RP+ + + + N L
Sbjct: 259 KQPPECM-EEVYDLM--------------------YQCWSADPKQRPSFTCLRMELENIL 297
Query: 777 FNLPSPKEPPFTTF 790
+L +
Sbjct: 298 GHLSVLSTSQDPLY 311
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 3e-33
Identities = 66/281 (23%), Positives = 106/281 (37%), Gaps = 58/281 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E ++ +LG G FG V G+ +VAVK + + EF E + KL H LV
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+ G C ++ ++ EY+ N L +L + L + + + +
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 636 -------------DQHMNPKISDFGMARMFGGDE--LQGNTKRIVGTYGYMSPEYALEGV 680
D+ + K+SDFGM R D+ TK V + +PE
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV---KWSAPEVFHYFK 181
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHELMDP 733
+S KSDV++FG+LM E+ S K N++ + L +D +++M
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLA-SDTIYQIM-- 238
Query: 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C E E RPT ++S I
Sbjct: 239 ------------------YSCWHELPEKRPTFQQLLSSIEP 261
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 3e-33
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 53/294 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + F E ++ KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L E+ I + EYM SL FL T K+L QL V + IA
Sbjct: 243 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVERMN 300
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
+++ K++DFG+AR+ +E + +PE AL G F+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFT 359
Query: 683 VKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPVLQ 736
+KSDV+SFG+L+ E+ + + G+ N + + + + + + H+LM
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM----- 414
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTF 790
C ++ E+RPT + + + + F P+ P
Sbjct: 415 ---------------CQCWRKEPEERPTFEYLQAFL-EDYFTSTEPQYQPGENL 452
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 3e-33
Identities = 72/302 (23%), Positives = 116/302 (38%), Gaps = 78/302 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE------VAVKRL-SNQSGQGLKEFKNEMMLIAK 577
E ++ +LG+G FG VY+G + VA+K + S + EF NE ++ +
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--------FDPTKKHLLGWQLRVRI 629
++VRLLG + ++I E M L +L +P ++ +++
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM-IQM 143
Query: 630 IDGIAQ----------------------DQHMNPKISDFGMAR-MFGGD--ELQGNTK-- 662
IA + KI DFGM R ++ D G
Sbjct: 144 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 663 -RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLL--GH 717
R +MSPE +GVF+ SDV+SFGV++ EI + + G+ N + G
Sbjct: 204 VR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257
Query: 718 AWS---LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C D ELM +C Q N + RP+ +++S I
Sbjct: 258 LLDKPDNCP-DMLFELM--------------------RMCWQYNPKMRPSFLEIISSIKE 296
Query: 775 EL 776
E+
Sbjct: 297 EM 298
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-33
Identities = 53/303 (17%), Positives = 110/303 (36%), Gaps = 72/303 (23%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNE--MMLIAKLQHRNLVRL 586
+Q +G+G FG V++G+ G+EVAVK S++ + + E + L+H N++
Sbjct: 46 LQESIGKGRFGEVWRGK-WRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGF 101
Query: 587 LGCCIEQGEKI----LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+ + L+ +Y + SL +L ++ + + +++ A
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHM 157
Query: 636 -----------------------DQHMNPKISDFGMARMF--GGDELQGNTKRIVGTYGY 670
++ I+D G+A D + VGT Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 671 MSPEYALEGVFSV-------KSDVFSFGVLMLEILSSKKNTGV---YNTDSFNLLGHAWS 720
M+PE L+ ++ ++D+++ G++ EI G+ Y ++L+ S
Sbjct: 218 MAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 276
Query: 721 LCKNDRAHELMDPVLQNEV---------SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771
+ E+ V + ++ S L + C N R T +
Sbjct: 277 V------EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330
Query: 772 INN 774
++
Sbjct: 331 LSQ 333
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 133 bits (335), Expect = 9e-33
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 53/294 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + F E ++ KL+H LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L E+ I + EYM SL FL T K+L QL V + IA
Sbjct: 326 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVERMN 383
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
+++ K++DFG+AR+ +E + +PE AL G F+
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFT 442
Query: 683 VKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPVLQ 736
+KSDV+SFG+L+ E+ + + G+ N + + + + + + H+LM
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM----- 497
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTF 790
C ++ E+RPT + + + + F P+ P
Sbjct: 498 ---------------CQCWRKEPEERPTFEYLQAFL-EDYFTSTEPQYQPGENL 535
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 67/325 (20%), Positives = 118/325 (36%), Gaps = 91/325 (28%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL--------NGQEVAVKRL-SNQSGQGLKEFKNEMMLI 575
+ ++ LGEG FG V + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------FDPTKKHLLGWQL 625
+ +H+N++ LLG C + G +I EY +L +L + + Q+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 626 RVRIIDGIAQD--------------------------QHMNPKISDFGMAR-MFGGDELQ 658
+ + ++ KI+DFG+AR + D +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 659 GNTK-----RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDS 711
T + +M+PE + V++ +SDV+SFGVLM EI + + G+ +
Sbjct: 215 KTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 712 FNLLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSD 767
F LL + K + + +M C RPT
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMM--------------------RDCWHAVPSQRPTFKQ 308
Query: 768 VVSMINNEL--------FNLPSPKE 784
+V ++ L +L P E
Sbjct: 309 LVEDLDRILTLTTNEEYLDLSQPLE 333
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 3e-32
Identities = 74/336 (22%), Positives = 126/336 (37%), Gaps = 82/336 (24%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAKLQ 579
N SI +G G FG V GRL + VA+K L + + ++F E ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
H N++RL G + +++ EYM N SLD FL QL V ++ GIA
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQL-VGMLRGIASGMKY 162
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY------- 670
+ ++ K+SDFG+ R+ D
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP-----------EAAYTTRGGK 211
Query: 671 -----MSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-- 721
SPE F+ SDV+S+G+++ E++S + + N D + + L
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 722 ---CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
C ++LM L C Q++ +RP +VS++ ++L
Sbjct: 272 PMDCP-AALYQLM--------------------LDCWQKDRNNRPKFEQIVSIL-DKLIR 309
Query: 779 LPSPKEPPFTTFTKGKNMKYSSNSTSGTSEFCSVND 814
P + + + N+ S + F + D
Sbjct: 310 NPGSLKIITSAAARPSNL-LLDQSNVDITTFRTTGD 344
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 3e-32
Identities = 66/315 (20%), Positives = 109/315 (34%), Gaps = 90/315 (28%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG------QEVAVKRL-SNQSGQGLKEFKNEMMLIAK 577
N +GEG FG V++ R VAVK L S +F+ E L+A+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------------FDPT 616
+ N+V+LLG C L++EYM L+ FL
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 617 KKHLLGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMAR-MFG 653
L ++ I +A ++M KI+DFG++R ++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 654 GD--ELQGNTK---RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGV 706
D + GN R +M PE ++ +SDV+++GV++ EI S G+
Sbjct: 227 ADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280
Query: 707 YNTDSFNLLGHAWSL-----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAED 761
+ + + L C + LM LC + D
Sbjct: 281 AHEEVIYYVRDGNILACPENCP-LELYNLM--------------------RLCWSKLPAD 319
Query: 762 RPTMSDVVSMINNEL 776
RP+ + ++
Sbjct: 320 RPSFCSIHRILQRMC 334
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 3e-32
Identities = 64/309 (20%), Positives = 114/309 (36%), Gaps = 83/309 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL--------NGQEVAVKRL-SNQSGQGLKEFKNEMMLI 575
+ ++ LGEG FG V + VAVK L + + + L + +EM ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------FDPTKKHLLGWQL 625
+ +H+N++ LLG C + G +I EY +L +L + + Q+
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 626 RVRIIDGIAQD--------------------------QHMNPKISDFGMAR-MFGGDELQ 658
+ + ++ KI+DFG+AR + D +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 659 GNTK-----RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDS 711
T + +M+PE + V++ +SDV+SFGVLM EI + + G+ +
Sbjct: 261 KTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
Query: 712 FNLLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSD 767
F LL + K + + +M C RPT
Sbjct: 315 FKLLKEGHRMDKPANCTNELYMMM--------------------RDCWHAVPSQRPTFKQ 354
Query: 768 VVSMINNEL 776
+V ++ L
Sbjct: 355 LVEDLDRIL 363
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 5e-32
Identities = 67/314 (21%), Positives = 118/314 (37%), Gaps = 88/314 (28%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG------QEVAVKRL-SNQSGQGLKEFKNEMMLIAK 577
+N + LGEG FG V K + VAVK L N S L++ +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------------FDPTKKHL 620
+ H ++++L G C + G +LI EY SL FL + H
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 621 LGWQLRVRIIDGIAQD--------------------------QHMNPKISDFGMAR-MFG 653
L + + A + KISDFG++R ++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 654 GDELQGNTK-----RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGV 706
D ++ + +M+ E + +++ +SDV+SFGVL+ EI++ N G+
Sbjct: 203 EDSYVKRSQGRIPVK------WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 707 YNTDSFNLLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDR 762
FNLL + + ++ + LM L C ++ + R
Sbjct: 257 PPERLFNLLKTGHRMERPDNCSEEMYRLM--------------------LQCWKQEPDKR 296
Query: 763 PTMSDVVSMINNEL 776
P +D+ + +
Sbjct: 297 PVFADISKDLEKMM 310
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 7e-32
Identities = 69/320 (21%), Positives = 121/320 (37%), Gaps = 84/320 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN--------GQEVAVKRL-SNQSGQGLKEFKNEMMLI 575
+ + LGEG FG V + +VAVK L S+ + + L + +EM ++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------FDPTKKHLLGWQL 625
+ +H+N++ LLG C + G +I EY +L +L + H QL
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 626 RVRIIDGIAQD--------------------------QHMNPKISDFGMAR-MFGGD--E 656
+ + A + KI+DFG+AR + D +
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 657 LQGNTK---RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDS 711
N + + +M+PE + +++ +SDV+SFGVL+ EI + + GV +
Sbjct: 249 KTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302
Query: 712 FNLLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSD 767
F LL + K + + +M C RPT
Sbjct: 303 FKLLKEGHRMDKPSNCTNELYMMM--------------------RDCWHAVPSQRPTFKQ 342
Query: 768 VVSMINNELFNLPSPKEPPF 787
+V ++ + L S +E +
Sbjct: 343 LVEDLDR-IVALTSNQEMGY 361
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 8e-32
Identities = 70/304 (23%), Positives = 113/304 (37%), Gaps = 81/304 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQ 579
I+ +G G G V GRL VA+K L + + + ++F +E ++ +
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
H N++RL G +++ EYM N SLD FL QL V ++ G+
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQL-VGMLRGVGAGMRY 166
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY------- 670
D ++ K+SDFG++R+ D
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP-----------DAAYTTTGGK 215
Query: 671 -----MSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-- 721
+PE FS SDV+SFGV+M E+L+ + + N D + + + L
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA 275
Query: 722 ---CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
C H+LM L C ++ RP S +VS++ + L
Sbjct: 276 PMGCP-HALHQLM--------------------LDCWHKDRAQRPRFSQIVSVL-DALIR 313
Query: 779 LPSP 782
P
Sbjct: 314 SPES 317
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 1e-31
Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 70/299 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLKEFKNEMMLIAKL 578
+ Q +G G FG VYKG L VA+K L + + + +F E ++ +
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--- 635
H N++RL G + ++I EYM N +LD FL + QL V ++ GIA
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK-DGEFSVLQL-VGMLRGIAAGMK 161
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG------Y 670
+ ++ K+SDFG++R+ D T G +
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS-----GGKIPIRW 216
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CK 723
+PE F+ SDV+SFG++M E+++ + + N + + + L C
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP 276
Query: 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSP 782
++LM + C Q+ RP +D+VS++ ++L P
Sbjct: 277 -SAIYQLM--------------------MQCWQQERARRPKFADIVSIL-DKLIRAPDS 313
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 1e-31
Identities = 49/296 (16%), Positives = 91/296 (30%), Gaps = 77/296 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL--------LNGQEVAVKRLSNQSGQGLKEFKNEMMLIA 576
E+ LG+G F ++KG L+ EV +K L + F +++
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR---------- 626
KL H++LV G C+ E IL+ E++ SLD +L + W+L
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMH 127
Query: 627 ------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668
+ + K+SD G++ +
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD-----------I 176
Query: 669 GY-----MSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWS 720
+ PE ++ +D +SFG + EI S + + +
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ 236
Query: 721 LCK--NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+ C+ + RP+ ++ +N+
Sbjct: 237 LPAPKAAELANLI--------------------NNCMDYEPDHRPSFRAIIRDLNS 272
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-31
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 85/298 (28%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLKEFKNEMMLIAKL 578
F LG G FG VYKG + E VA+K L S + KE +E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----TKKHLLGWQLRVRIIDGIA 634
+ ++ RLLG C+ ++ I + M L ++ + ++LL W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 127
Query: 635 Q----------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY-- 670
+ + KI+DFG+A++ G +E Y
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---------KEYHAEG 178
Query: 671 -------MSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL 721
M+ E L +++ +SDV+S+GV + E+++ G+ ++ ++L L
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 722 -----CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C D + +M C +A+ RP +++ +
Sbjct: 239 PQPPICTID-VYMIM--------------------RKCWMIDADSRPKFRELIIEFSK 275
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 4e-31
Identities = 59/295 (20%), Positives = 101/295 (34%), Gaps = 64/295 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAKLQ 579
E + +GEG FG V++G ++ + VA+K + S ++F E + + +
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
H ++V+L+G E I I E L FL K L L + ++
Sbjct: 75 HPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVR-KYSLDLASL-ILYAYQLSTALAY 131
Query: 636 ------------------DQHMNPKISDFGMARMFGGDE--LQGNTKRIVGTYGYMSPEY 675
+ K+ DFG++R K + +M+PE
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPES 188
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAH 728
F+ SDV+ FGV M EIL GV N D + + L C +
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP-PTLY 247
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
LM C + RP +++ + + + + +
Sbjct: 248 SLM--------------------TKCWAYDPSRRPRFTELKAQL-STILEEEKAQ 281
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 9e-31
Identities = 60/294 (20%), Positives = 103/294 (35%), Gaps = 66/294 (22%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+LG G FG V +G ++ VA+K L +E E ++ +L + +V
Sbjct: 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 585 RLLGCCIEQGEKILI-YEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
RL+G C Q E +++ E L FL ++ + + ++ ++
Sbjct: 74 RLIGVC--QAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNV-AELLHQVSMGMKYLEEK 129
Query: 636 --------------DQHMNPKISDFGMARMFGGDEL----QGNTKRIVGTYGYMSPEYAL 677
KISDFG+++ G D+ + K + + +PE
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK---WYAPECIN 186
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHEL 730
FS +SDV+S+GV M E LS + + + + + C + L
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC-PPELYAL 245
Query: 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKE 784
M C EDRP V + ++L S E
Sbjct: 246 M--------------------SDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 279
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 1e-30
Identities = 61/309 (19%), Positives = 108/309 (34%), Gaps = 83/309 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRL-SNQSGQGLKEFKNEMMLIAK 577
+ + LG G FG V + + VAVK L + + +E+ ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 578 L-QHRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFL---------FDPTKKHLLGWQLR 626
+ H N+V LLG C + G + +I E+ +L +L + + L L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 627 VRIIDGIAQD--------------------------QHMNPKISDFGMAR-MFGGDELQG 659
+ + + + KI DFG+AR ++ +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 660 NTK-----RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGV-YNTDS 711
+ +M+PE + V++++SDV+SFGVL+ EI S + GV + +
Sbjct: 207 KGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 712 FNLLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSD 767
L + ++ M L C RPT S+
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTM--------------------LDCWHGEPSQRPTFSE 300
Query: 768 VVSMINNEL 776
+V + N L
Sbjct: 301 LVEHLGNLL 309
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-30
Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 73/291 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLKEFKNEMMLIAKL 578
LG G FG V+KG + E V +K + ++SG Q + + M+ I L
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----TKKHLLGWQLRVRIIDGIA 634
H ++VRLLG C ++ + +Y+ SL + + LL W + IA
Sbjct: 73 DHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGV------QIA 125
Query: 635 Q----------------------DQHMNPKISDFGMARMFGGDEL---QGNTKRIVGTYG 669
+ +++DFG+A + D+ K +
Sbjct: 126 KGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI---K 182
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----C 722
+M+ E G ++ +SDV+S+GV + E+++ G+ + +LL L C
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQIC 242
Query: 723 KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773
D + +M + C + RPT ++ +
Sbjct: 243 TID-VYMVM--------------------VKCWMIDENIRPTFKELANEFT 272
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-30
Identities = 65/300 (21%), Positives = 109/300 (36%), Gaps = 78/300 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAKLQ 579
E+ + LGEG FG VY+G N + VAVK + + ++F +E +++ L
Sbjct: 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRVRIIDGIAQ 635
H ++V+L+G E+ I I E L +L L+ + L I +
Sbjct: 72 HPHIVKLIGIIEEEPTWI-IMELYPYGELGHYLERNKNSLKVLTLVLYSL------QICK 124
Query: 636 ----------------------DQHMNPKISDFGMARMFGGDE--LQGNTK---RIVGTY 668
K+ DFG++R ++ T+ +
Sbjct: 125 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK----- 179
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL----- 721
+MSPE F+ SDV+ F V M EILS K + N D +L L
Sbjct: 180 -WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 238
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781
C + LM C + DRP +++V + ++++ +
Sbjct: 239 C-PPVLYTLM--------------------TRCWDYDPSDRPRFTELVCSL-SDVYQMEK 276
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-30
Identities = 70/323 (21%), Positives = 123/323 (38%), Gaps = 91/323 (28%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLKEFKNEMMLIAKL 578
F LG G FG VYKG + E VA+K L S + KE +E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--- 635
+ ++ RLLG C+ ++ I + M L ++ + K +G Q + IA+
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMN 131
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY------ 670
+ KI+DFG+A++ G +E Y
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---------KEYHAEGGKVP 182
Query: 671 ---MSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSL---- 721
M+ E L +++ +SDV+S+GV + E+++ SK G+ ++ ++L L
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
Query: 722 -CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI-------- 772
C D + +M + C +A+ RP +++
Sbjct: 243 ICTID-VYMIM--------------------VKCWMIDADSRPKFRELIIEFSKMARDPQ 281
Query: 773 ------NNELFNLPSPKEPPFTT 789
+E +LPSP + F
Sbjct: 282 RYLVIQGDERMHLPSPTDSNFYR 304
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 3e-29
Identities = 56/305 (18%), Positives = 101/305 (33%), Gaps = 74/305 (24%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE------VAVKRL-SNQSGQGLKEFKNEMMLIAK 577
S LG G FG V + + VAVK L + + +E+ +++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 578 L-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTKKHLLGWQL 625
L H N+V LLG C G ++I EY L FL P L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 626 RVRIIDGIAQD--------------------------QHMNPKISDFGMAR-MFGGDELQ 658
+ + + KI DFG+AR +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGV-YNTDSFNLL 715
+ +M+PE V++ +SDV+S+G+ + E+ S + G+ ++ + ++
Sbjct: 203 VKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 716 GHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771
+ + +++M C + RPT +V +
Sbjct: 262 KEGFRMLSPEHAPAEMYDIM--------------------KTCWDADPLKRPTFKQIVQL 301
Query: 772 INNEL 776
I ++
Sbjct: 302 IEKQI 306
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 3e-29
Identities = 65/296 (21%), Positives = 112/296 (37%), Gaps = 67/296 (22%)
Query: 525 ENFSIQSK-LGEGGFGPVYKGRLLNG---QEVAVKRL--SNQSGQGLKEFKNEMMLIAKL 578
+ +++ K LG G FG V KG + VAVK L E E ++ +L
Sbjct: 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 75
Query: 579 QHRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
+ +VR++G C + E L+ E L+ +L +H+ + + ++ ++
Sbjct: 76 DNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IELVHQVSMGM 130
Query: 636 --------------------DQHMNPKISDFGMARMFGGDE----LQGNTKRIVGTYGYM 671
KISDFG+++ DE Q + K V +
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK---WY 187
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----ND 725
+PE FS KSDV+SFGVLM E S + G+ ++ +L +
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 247
Query: 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781
++LM LC + E+RP + V + N +++ +
Sbjct: 248 EMYDLM--------------------NLCWTYDVENRPGFAAVELRLRNYYYDVVN 283
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 123 bits (309), Expect = 4e-29
Identities = 58/295 (19%), Positives = 101/295 (34%), Gaps = 64/295 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAKLQ 579
E + +GEG FG V++G ++ + VA+K + S ++F E + + +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
H ++V+L+G E I I E L FL +K L + ++
Sbjct: 450 HPHIVKLIGVITENPVWI-IMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAY 506
Query: 636 ------------------DQHMNPKISDFGMARMFGGDE--LQGNTKRIVGTYGYMSPEY 675
+ K+ DFG++R K + +M+PE
Sbjct: 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPES 563
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAH 728
F+ SDV+ FGV M EIL GV N D + + L C +
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP-PTLY 622
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
LM C + RP +++ + + + + +
Sbjct: 623 SLM--------------------TKCWAYDPSRRPRFTELKAQL-STILEEEKLQ 656
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 5e-29
Identities = 67/307 (21%), Positives = 108/307 (35%), Gaps = 82/307 (26%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE------VAVKRL-SNQSGQGLKEFKNEMMLIAK 577
N LG G FG V + + VAVK L S + +E+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 578 L-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------------FDPTKKHLLGWQ 624
L QH N+V LLG C G ++I EY L FL F
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 625 LRVRIIDGIAQ----------------------DQHMNPKISDFGMAR-MFGGDE--LQG 659
L + +AQ KI DFG+AR + ++G
Sbjct: 166 L-LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 660 NTK---RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVY-NTDSFN 713
N + + +M+PE + V++V+SDV+S+G+L+ EI S N G+ N+ +
Sbjct: 225 NARLPVK------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 714 LLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
L+ + + + + +M C RPT +
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIM--------------------QACWALEPTHRPTFQQIC 318
Query: 770 SMINNEL 776
S + +
Sbjct: 319 SFLQEQA 325
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 5e-29
Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 37/207 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSN---QSGQGLKEFKNEMMLIAK 577
++ + KLG+G FG V +G VAVK L + + +F E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
L HRNL+RL G + K+ + E SL L + H L L R +A+
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLLGTL-SRYAVQVAEGM 134
Query: 636 --------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMS 672
KI DFG+ R ++ + + + +
Sbjct: 135 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE--HRKVPFAWCA 192
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE FS SD + FGV + E+ +
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFT 219
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 2e-28
Identities = 58/294 (19%), Positives = 101/294 (34%), Gaps = 64/294 (21%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+LG G FG V +G ++ VA+K L +E E ++ +L + +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
RL+G C + + + E L FL ++ + + ++ ++
Sbjct: 400 RLIGVCQAEALML-VMEMAGGGPLHKFLVGK-REEIPVSNV-AELLHQVSMGMKYLEEKN 456
Query: 636 -------------DQHMNPKISDFGMARMFGGDEL----QGNTKRIVGTYGYMSPEYALE 678
KISDFG+++ G D+ + K + + +PE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK---WYAPECINF 513
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSL-----CKNDRAHELM 731
FS +SDV+S+GV M E LS + + + + + C + LM
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP-PELYALM 572
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785
C EDRP V + ++L S E
Sbjct: 573 --------------------SDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 606
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 7e-28
Identities = 62/315 (19%), Positives = 107/315 (33%), Gaps = 89/315 (28%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE------VAVKRL-SNQSGQGLKEFKNEMMLIAK 577
EN LG G FG V + VAVK L + +E+ ++ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 578 L-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL----------------FDPTKKHL 620
L H N+V LLG C G LI+EY L +L ++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 621 LGWQLRVRIIDGIAQD--------------------------QHMNPKISDFGMAR-MFG 653
L + A KI DFG+AR +
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 654 GDELQGNTK-----RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGV 706
+ +M+PE EG++++KSDV+S+G+L+ EI S N G+
Sbjct: 225 DSNYVVRGNARLPVK------WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278
Query: 707 -YNTDSFNLLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAED 761
+ + + L+ + + + + + + +M C ++
Sbjct: 279 PVDANFYKLIQNGFKMDQPFYATEEIYIIM--------------------QSCWAFDSRK 318
Query: 762 RPTMSDVVSMINNEL 776
RP+ ++ S + +L
Sbjct: 319 RPSFPNLTSFLGCQL 333
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-24
Identities = 58/315 (18%), Positives = 108/315 (34%), Gaps = 67/315 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRN 582
+F LG GGFG V++ + ++ A+KR+ ++ E+ +AKL+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 583 LVRLLGCCIE---------QGEKILIY---EYMVNKSLDVFLFDPTKKHLLGWQLRVRII 630
+VR +E K+ +Y + ++L ++ + + I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 631 DGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGNTKR----- 663
IA+ K+ DFG+ DE +
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 664 -----IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA 718
VGT YMSPE +S K D+FS G+++ E+L Y +
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL--------YPFSTQMERVRT 236
Query: 719 WSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF- 777
+ +N + L E + + + + +RP ++ I N +F
Sbjct: 237 LTDVRNLKFPPLFTQKYPCEYVM------VQ---DMLSPSPMERPEAINI---IENAVFE 284
Query: 778 NLPSPKEPPFTTFTK 792
+L P + ++
Sbjct: 285 DLDFPGKTVLRQRSR 299
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 4e-23
Identities = 55/282 (19%), Positives = 105/282 (37%), Gaps = 65/282 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+F +G GGFG V+K + ++G+ +KR+ + ++ + E+ +AKL H N+
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66
Query: 584 VRLLGCCIEQGEKI----------------LIYEYMVNKSLDVFLFDPTKKHL---LGWQ 624
V GC + E+ +L+ ++ + L L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 625 LRVRIIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVG 666
L +I G+ KI DFG+ D G R G
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRTRSKG 183
Query: 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR 726
T YMSPE + + D+++ G+++ E+L + T F ++ ++
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT--AFETSKF------FTDLRDGI 235
Query: 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
++ D + L++ + + EDRP S++
Sbjct: 236 ISDIFDKKEKT------LLQ------KLLSKKPEDRPNTSEI 265
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 6e-23
Identities = 56/272 (20%), Positives = 100/272 (36%), Gaps = 67/272 (24%)
Query: 532 KLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
++G G F VYKG EVA + + + FK E ++ LQH N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 589 CCIEQGEK----ILIYEYMVNKSLDVFLFDPTKKH-LLGWQLRVR----IIDGIAQDQHM 639
+ +L+ E M + +L +L K+ ++ ++ I+ G+
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTLKTYL----KRFKVMKIKVLRSWCRQILKGLQFLHTR 148
Query: 640 NP---------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
P KI D G+A + K ++GT +M+PE E
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE 204
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA------HELMD 732
DV++FG+ MLE+ +S+ + +S C+N +
Sbjct: 205 KY-DESVDVYAFGMCMLEMATSE---------------YPYSECQNAAQIYRRVTSGVKP 248
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
P + I C+++N ++R +
Sbjct: 249 ASFDKVAI-PEVKEIIE---GCIRQNKDERYS 276
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 1e-22
Identities = 55/289 (19%), Positives = 113/289 (39%), Gaps = 51/289 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
E + K+GEG FG + +G++ +K +S S + +E + E+ ++A ++H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL-----LGW--QL--------R 626
N+V+ E G ++ +Y L + L W Q+
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 627 VRII--DGIAQ----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+I+ D +Q + ++ DFG+AR+ +GT Y+SPE
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPYYLSPEICENKP 201
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740
++ KSD+++ G ++ E+ + K + S L+ ++
Sbjct: 202 YNNKSDIWALGCVLYELCTLKH---AFEAGSMK---------------NLVLKIISGSFP 243
Query: 741 LPMLVRY----INVALLCVQENAEDRPTMSDVVSM--INNELFNLPSPK 783
P+ + Y ++ + N DRP+++ ++ I + SP+
Sbjct: 244 -PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQ 291
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 2e-22
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 41/271 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL---SNQSGQGLKEFKNEMMLIAKLQH 580
NF I+ K+G G F VY+ LL+G VA+K++ + + E+ L+ +L H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH-------LLGW--QL------ 625
N+++ IE E ++ E L + K+ + + QL
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 626 --RVRII--DGIAQ----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
R++ D K+ D G+ R F ++ +VGT YMSPE
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIH 209
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
E ++ KSD++S G L+ E+ + + + D NL + + D P+ +
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQS---PFYGDKMNLYSLCKKIEQCD-----YPPLPSD 261
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
S + + +C+ + E RP ++ V
Sbjct: 262 HYSEEL----RQLVNMCINPDPEKRPDVTYV 288
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 6e-21
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 48/222 (21%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
+F + LG+G FG V K R L+ + A+K++ + + L +E+ML+A L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVF---------LFDPTKKHLLG------WQLRV 627
+VR +E+ + + KS L+D L W+L
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 628 RIIDGIAQ------------------DQHMNPKISDFGMARMF------------GGDEL 657
+I++ ++ D+ N KI DFG+A+
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 658 QGNTKRIVGTYGYMSPE-YALEGVFSVKSDVFSFGVLMLEIL 698
N +GT Y++ E G ++ K D++S G++ E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 6e-21
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 40/222 (18%)
Query: 516 SFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKR--LSNQSGQGLKEFKNEMM 573
F S++ +SI ++G GG V++ Q A+K L Q L ++NE+
Sbjct: 19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 574 LIAKLQHRNL--VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---R 628
+ KLQ + +RL I ++ E N L+ +L KK + W+ +
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKN 135
Query: 629 IIDGIAQ--DQ---HM------------NPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
+++ + H K+ DFG+A D VGT YM
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 672 SPEYALEGV------------FSVKSDVFSFGVLMLEILSSK 701
PE A++ + S KSDV+S G ++ + K
Sbjct: 196 PPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
E++ + +G G +G K R +G+ + K + + + +E+ L+ +L+H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 582 NLVRLLGCCIEQGEKIL--IYEYMVNKSLDVFLFDPTKKH-------LLGW--QL----- 625
N+VR I++ L + EY L + TK+ +L QL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 626 --------RVRII--DGIAQ----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
++ D D N K+ DFG+AR+ D T VGT YM
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYM 183
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILS 699
SPE ++ KSD++S G L+ E+ +
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCA 211
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 3e-20
Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 42/252 (16%)
Query: 486 NMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR 545
+ ++ G D +S SV +SI ++G GG V++
Sbjct: 19 ETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKG--RIYSILKQIGSGGSSKVFQVL 76
Query: 546 LLNGQEVAVKR--LSNQSGQGLKEFKNEMMLIAKLQHRNL--VRLLGCCIEQGEKILIYE 601
Q A+K L Q L ++NE+ + KLQ + +RL I ++ E
Sbjct: 77 NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136
Query: 602 YMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGIA--QDQH---------------MNP 641
N L+ +L KK + W+ + +++ +
Sbjct: 137 C-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML 193
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV------------FSVKSDVFS 689
K+ DFG+A D VG YM PE A++ + S KSDV+S
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWS 252
Query: 690 FGVLMLEILSSK 701
G ++ + K
Sbjct: 253 LGCILYYMTYGK 264
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 4e-20
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 38/212 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKR--LSNQSGQGLKEFKNEMMLIAKLQHRN 582
+SI ++G GG V++ Q A+K L Q L ++NE+ + KLQ +
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 583 L--VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGIA--Q 635
+RL I ++ E N L+ +L KK + W+ + +++ +
Sbjct: 69 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 125
Query: 636 DQ---HM------------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE------ 674
H K+ DFG+A D VGT YM PE
Sbjct: 126 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 675 -----YALEGVFSVKSDVFSFGVLMLEILSSK 701
+ S KSDV+S G ++ + K
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 5e-20
Identities = 53/312 (16%), Positives = 106/312 (33%), Gaps = 67/312 (21%)
Query: 520 VTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL 578
V +++ KLGEGGF V L +G A+KR+ Q +E + E +
Sbjct: 24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF 83
Query: 579 QHRNLVRLLGCCIEQGEK----ILIYEYMVNKSL-DVFLFDPTKKHLLG----WQLRVRI 629
H N++RL+ C+ + L+ + +L + K + L L + I
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 630 IDGIAQ------------------DQHMNPKISDFGMAR-----MFGGDELQGNTKRI-- 664
G+ P + D G + G +
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 665 VGTYGYMSPE------YALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA 718
T Y +PE + V ++DV+S G ++ ++ + ++
Sbjct: 204 RCTISYRAPELFSVQSHC---VIDERTDVWSLGCVLYAMM--------FGEGPYD----- 247
Query: 719 WSLCKNDRAHELMDPVLQNEVSLPMLVRY----INVALLCVQENAEDRPTMSDVVSMINN 774
+ + + +QN++S+P R+ + + + RP + ++S +
Sbjct: 248 ----MVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL-- 301
Query: 775 ELFNLPSPKEPP 786
E P+P +
Sbjct: 302 EALQPPAPGQHT 313
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 8e-20
Identities = 55/263 (20%), Positives = 88/263 (33%), Gaps = 38/263 (14%)
Query: 466 RKENETKNLDTNQDLLAFDVNMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATE 525
+ + +D + L F + R F G+ + + S +
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMHQLQPRRVSF---RGEASETLQSPGYDPSRPESFF--QQ 57
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL-QHR 581
+F S+LG G +G V+K R +G+ AVK + + E+ K+ QH
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLG----WQLRVRIIDGIAQ-- 635
VRL E G L E SL L W + +A
Sbjct: 118 CCVRLEQAWEEGGILYLQTEL-CGPSLQQHCEA--WGASLPEAQVWGYLRDTLLALAHLH 174
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
K+ DFG+ G + G YM+PE L+G
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA---GEVQEGDPRYMAPE-LLQG 230
Query: 680 VFSVKSDVFSFGVLMLEILSSKK 702
+ +DVFS G+ +LE+ + +
Sbjct: 231 SYGTAADVFSLGLTILEVACNME 253
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 5e-19
Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 47/202 (23%)
Query: 529 IQSKLGEGGFGPVYKGR--LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVR 585
++ + GG G +Y +NG+ V +K L + + E +A++ H ++V+
Sbjct: 84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143
Query: 586 LL--GCCIEQGEKILIY---EYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA------ 634
+ ++ + Y EY+ +SL L + + I
Sbjct: 144 IFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-----LPVAEAIAYLLEILPALSYL 198
Query: 635 ------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
++Q K+ D G + GT G+ +PE
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQ---LKLIDLGAVSRINS------FGYLYGTPGFQAPEIV 249
Query: 677 LEGVFSVKSDVFSFGVLMLEIL 698
G +V +D+++ G + +
Sbjct: 250 RTGP-TVATDIYTVGRTLAALT 270
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 2e-18
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 30/196 (15%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
LG+G +G VY GR L N +A+K + + + + E+ L L+H+N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 592 EQGEKILIY-EYMVNKSLDVFL---FDP-----------TKKHLLGWQ-LRVR-II---- 630
E I I+ E + SL L + P TK+ L G + L I+
Sbjct: 90 E-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 631 --DGIAQDQHM-NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV--FSVKS 685
D + + + KISDFG ++ G + T+ GT YM+PE +G + +
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 686 DVFSFGVLMLEILSSK 701
D++S G ++E+ + K
Sbjct: 207 DIWSLGCTIIEMATGK 222
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 3e-18
Identities = 43/218 (19%), Positives = 75/218 (34%), Gaps = 51/218 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRN 582
+ + LG+G V++GR G A+K +N S + E ++ KL H+N
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68
Query: 583 LVRLLGCCIEQGEKILIY---EYMVNKSLDVFLFDPTKKHLLG--------WQLRVRIID 631
+V+L E+ E+ SL L +P+ + L ++
Sbjct: 69 IVKLFA-IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD----VVG 123
Query: 632 GIA----------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG 669
G+ +D K++DFG AR DE + GT
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGTEE 180
Query: 670 YMSPE--------YALEGVFSVKSDVFSFGVLMLEILS 699
Y+ P+ + + D++S GV +
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 7e-18
Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 30/196 (15%)
Query: 529 IQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG---LKEFKNEMMLIAKLQHRNLV 584
I KLG GG VY + +VA+K + + LK F+ E+ ++L H+N+V
Sbjct: 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
++ E L+ EY+ +L ++ L + + I
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHDMR 131
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
D + KI DFG+A+ L T ++GT Y SPE A
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKGEATD 190
Query: 683 VKSDVFSFGVLMLEIL 698
+D++S G+++ E+L
Sbjct: 191 ECTDIYSIGIVLYEML 206
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 8e-18
Identities = 44/214 (20%), Positives = 76/214 (35%), Gaps = 43/214 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRN 582
+ + LG+G V++GR G A+K +N S + E ++ KL H+N
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68
Query: 583 LVRLLGCCIEQGEKILIY---EYMVNKSLDVFLFDPTKKHLLG--------WQL------ 625
+V+L E+ E+ SL L +P+ + L +
Sbjct: 69 IVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 626 --RVRII--D--------GIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
I+ + I +D K++DFG AR DE + GT Y+ P
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHP 184
Query: 674 E--------YALEGVFSVKSDVFSFGVLMLEILS 699
+ + + D++S GV +
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 9e-18
Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 42/208 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEM-MLIAKLQHRNLV 584
+F + LG G G + + + ++VAVKR+ + E+ +L +H N++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVI 81
Query: 585 RLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR-----IIDGIA---- 634
R C + + + E +L ++ +K L G+A
Sbjct: 82 RYF-CTEKDRQFQYIAIEL-CAATLQEYV---EQKDFAHLGLEPITLLQQTTSGLAHLHS 136
Query: 635 -------------------QDQHMNPKISDFGMARMFGGDEL-QGNTKRIVGTYGYMSPE 674
+ ISDFG+ + + GT G+++PE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 675 Y---ALEGVFSVKSDVFSFGVLMLEILS 699
+ + D+FS G + ++S
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVIS 224
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 3e-17
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 21/192 (10%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
+ ++ K+G+G G VY + GQEVA+++++ Q + NE++++ + ++ N
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSL-DVFLFDP---------TKKHLLGWQL--RVRII 630
+V L + E ++ EY+ SL DV ++ L + ++I
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVI 138
Query: 631 ------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
D I + K++DFG ++ + +T +VGT +M+PE + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPK 196
Query: 685 SDVFSFGVLMLE 696
D++S G++ +E
Sbjct: 197 VDIWSLGIMAIE 208
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 84.3 bits (208), Expect = 6e-17
Identities = 47/212 (22%), Positives = 78/212 (36%), Gaps = 46/212 (21%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNL 583
+ ++ +LG GGFG V + G++VA+K+ + +E + E+ ++ KL H N+
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 584 VRLLGCCIEQGEKI-------LIYEYMVNKSLDVFLFDPTKKHLLG--------WQLRVR 628
V + +K+ L EY L +L L
Sbjct: 75 VSAR-EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD---- 129
Query: 629 IIDGI---------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
I + Q + KI D G A+ EL VGT
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGT 186
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
Y++PE + ++V D +SFG L E ++
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 8e-17
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 507 SKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQ 563
S + E ++I LG+G FG V K + + QE AVK + ++ +
Sbjct: 4 HHHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK 63
Query: 564 GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL- 620
E+ L+ KL H N+++L + ++ E LFD +K
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFS 119
Query: 621 ------LGWQLRVRIID-----GIA-------------QDQHMNPKISDFGMARMFGGDE 656
+ Q+ I I +++ + KI DFG++ F +
Sbjct: 120 EHDAARIIKQV-FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
K +GT Y++PE L G + K DV+S GV++ +LS
Sbjct: 179 KM---KDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLS 217
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 1e-16
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
K+GEG G V R +G++VAVK + + Q + NE++++ QH N
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSL-DVFLFDP---------TKKHLLGWQL--RVRII 630
+V + + E ++ E++ +L D+ + L +I
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 631 ------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
D I K+SDFG D + + +VGT +M+PE +++ +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS--LVGTPYWMAPEVISRSLYATE 221
Query: 685 SDVFSFGVLMLE 696
D++S G++++E
Sbjct: 222 VDIWSLGIMVIE 233
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 1e-16
Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 39/206 (18%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQH 580
+E + KLG G +G V R + E A+K + ++ S + E+ ++ L H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQLRVRIID 631
N+++L ++ L+ E L FD + + Q+ + +
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQV-LSGVT 150
Query: 632 -----GIA-------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
I +++ KI DFG++ +F + K +GT Y++P
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAP 207
Query: 674 EYALEGVFSVKSDVFSFGVLMLEILS 699
E L + K DV+S GV++ +L+
Sbjct: 208 E-VLRKKYDEKCDVWSIGVILFILLA 232
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 3e-16
Identities = 41/205 (20%), Positives = 75/205 (36%), Gaps = 35/205 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQS--GQGLKE-FKNEMMLIAKLQH 580
+ LG+GGF ++ + A K + +E E+ + L H
Sbjct: 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 100
Query: 581 RNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR-----IIDGIA 634
+++V G E + + ++ E +S L + K+ + R I+ G
Sbjct: 101 QHVVGFHG-FFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQ 155
Query: 635 ------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
++ + KI DFG+A D + + GT Y++PE
Sbjct: 156 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVL 213
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ S + DV+S G +M +L K
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGK 238
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 3e-16
Identities = 47/217 (21%), Positives = 77/217 (35%), Gaps = 47/217 (21%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIA 576
+ Q ++G G FG V++ + G + AVK++ + + E++ A
Sbjct: 51 YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACA 105
Query: 577 KLQHRNLVRLLGCCIEQGEKILIY-EYMVNKSLDVFL--FDP---------TKKHLLGWQ 624
L +V L G E G + I+ E + SL + + L G
Sbjct: 106 GLSSPRIVPLYGAVRE-GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEG-- 162
Query: 625 L----RVRII-------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKR---I 664
L RI+ DG + DFG A D L + I
Sbjct: 163 LEYLHTRRILHGDVKADNVLLSSDGS------RAALCDFGHALCLQPDGLGKSLLTGDYI 216
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
GT +M+PE + K D++S +ML +L+
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 80.0 bits (197), Expect = 3e-16
Identities = 27/219 (12%), Positives = 52/219 (23%), Gaps = 41/219 (18%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR------LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
++ + LGEG F VY+ N Q+ +K + M +
Sbjct: 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP 123
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL----------FDPTKKHLLGWQL-- 625
++ + Q +L+ E +L + ++
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLY 183
Query: 626 ------RVRIIDG-----------------IAQDQHMNPKISDFGMARMFGGDELQGNTK 662
II G D + D G +
Sbjct: 184 MIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFT 243
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
T G+ E ++ + D F + +L
Sbjct: 244 AKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 4e-16
Identities = 44/201 (21%), Positives = 73/201 (36%), Gaps = 34/201 (16%)
Query: 529 IQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG---LKEFKNEMMLIAKLQHRNLV 584
+ LG GG V+ R L + ++VAVK L + F+ E A L H +V
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 585 RLLGCCIEQGEKILIY----EYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
+ + + EY+ +L + + + + + +I Q
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFS 132
Query: 636 -----------------DQHMNPKISDFGMARMFGGDELQG-NTKRIVGTYGYMSPEYAL 677
K+ DFG+AR T ++GT Y+SPE A
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 678 EGVFSVKSDVFSFGVLMLEIL 698
+SDV+S G ++ E+L
Sbjct: 193 GDSVDARSDVYSLGCVLYEVL 213
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 5e-16
Identities = 44/293 (15%), Positives = 82/293 (27%), Gaps = 73/293 (24%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKR--LSNQSGQGLKEFKNEMMLIAKL-Q 579
T F K+G G FG V+K L+G A+KR + E+ A L Q
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH---------------LLG-- 622
H ++VR E ++ EY SL + + + G
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 623 -------------------------WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657
+ + KI D G
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI----- 184
Query: 658 QGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLG 716
+ + G +++ E E K+D+F+ + ++ ++ G
Sbjct: 185 -SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE--------PLPR-NG 234
Query: 717 HAW-SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
W + + P + +S + + + + E RP+ +
Sbjct: 235 DQWHEIRQGRL------PRIPQVLSQEF----TELLKVMIHPDPERRPSAMAL 277
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 5e-16
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 41/231 (17%)
Query: 501 GDGKDKSKDSSLP-LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS 558
G G + P +F S ++ + Q LG+G FG V + + GQE AVK +S
Sbjct: 1 GPGSMMDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVIS 60
Query: 559 N---QSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD- 614
+ + E+ L+ +L H N+++L ++G L+ E L FD
Sbjct: 61 KRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDE 116
Query: 615 -PTKKHL-------LGWQLRVRIID-----GIA-------------QDQHMNPKISDFGM 648
++K + Q+ + I I + + N +I DFG+
Sbjct: 117 IISRKRFSEVDAARIIRQV-LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 175
Query: 649 ARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+ F + K +GT Y++PE L G + K DV+S GV++ +LS
Sbjct: 176 STHFEASKKM---KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 7e-16
Identities = 41/205 (20%), Positives = 75/205 (36%), Gaps = 35/205 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQS--GQGLKE-FKNEMMLIAKLQH 580
+ LG+GGF ++ + A K + +E E+ + L H
Sbjct: 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 74
Query: 581 RNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR-----IIDGIA 634
+++V G E + + ++ E +S L + K+ + R I+ G
Sbjct: 75 QHVVGFHG-FFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQ 129
Query: 635 ------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
++ + KI DFG+A D + + GT Y++PE
Sbjct: 130 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVL 187
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ S + DV+S G +M +L K
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGK 212
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 9e-16
Identities = 61/322 (18%), Positives = 110/322 (34%), Gaps = 58/322 (18%)
Query: 498 EADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKR 556
E + D + + + + ++F S+LG G G V+K +G +A K
Sbjct: 6 ELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL 65
Query: 557 LS-NQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--F 613
+ + E+ ++ + +V G GE + E+M SLD L
Sbjct: 66 IHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 125
Query: 614 DPTKKHLLGWQLRVRIIDG-------------------IAQDQHMNPKISDFGMARMFGG 654
+ +LG ++ + +I G I + K+ DFG++
Sbjct: 126 GRIPEQILG-KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-- 182
Query: 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI------LSSKKNTGVYN 708
+ N+ VGT YMSPE +SV+SD++S G+ ++E+ + +
Sbjct: 183 IDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 240
Query: 709 TDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM----LVRYIN--------------- 749
+ G A R + PM L+ YI
Sbjct: 241 MFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLE 300
Query: 750 ----VALLCVQENAEDRPTMSD 767
V C+ +N +R +
Sbjct: 301 FQDFVN-KCLIKNPAERADLKQ 321
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 38/197 (19%), Positives = 70/197 (35%), Gaps = 32/197 (16%)
Query: 529 IQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG---LKEFKNEMMLIAKLQHRNLV 584
++ +G GG G VY+ + + VA+K +S + E +LQ ++V
Sbjct: 38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVV 97
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+ G+ + + L L ++ L V I+ I
Sbjct: 98 PIHDFGEIDGQLYVDMRLINGVDLAAML---RRQGPLAPPRAVAIVRQIGSALDAAHAAG 154
Query: 636 -------------DQHMNPKISDFGMARMFGGDEL-QGNTKRIVGTYGYMSPEYALEGVF 681
+ DFG+A ++L Q VGT YM+PE E
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN--TVGTLYYMAPERFSESHA 212
Query: 682 SVKSDVFSFGVLMLEIL 698
+ ++D+++ ++ E L
Sbjct: 213 TYRADIYALTCVLYECL 229
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 77.8 bits (191), Expect = 3e-15
Identities = 33/300 (11%), Positives = 73/300 (24%), Gaps = 86/300 (28%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQH-------- 580
LG+ + G+ V +K+ K E++ + L+
Sbjct: 86 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145
Query: 581 --------RNLVRLLGCC-----------IEQGEKILIYEYMVNKSLDVF--LFDPTKKH 619
+LV+ + + +Y M + L + H
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205
Query: 620 -LLGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDE 656
L R+++ + + DQ ++ F G
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD-GAS 264
Query: 657 LQGNTKRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGV--YNT 709
R + + + D ++ G+ + I
Sbjct: 265 AVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW-----CADLPNTD 319
Query: 710 DSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
D+ A + + ++ ++P VR + L + EDR +
Sbjct: 320 DA---------------ALGGSEWIFRSCKNIPQPVRALLEGFL--RYPKEDRLLPLQAM 362
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 77.5 bits (191), Expect = 4e-15
Identities = 42/224 (18%), Positives = 66/224 (29%), Gaps = 55/224 (24%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEM-MLIAKLQHRNLVR 585
+ LG G G V G+ VAVKR+ E+ +L H N++R
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIR 73
Query: 586 LLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR--------IIDGIA-- 634
C + + E N +L + + I G+A
Sbjct: 74 YY-CSETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 635 -----------------------------QDQHMNPKISDFGMARMFGGDE--LQGNTKR 663
+++ ISDFG+ + + + N
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 664 IVGTYGYMSPEYALEGVFSV-------KSDVFSFGVLMLEILSS 700
GT G+ +PE E D+FS G + ILS
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 4e-15
Identities = 53/341 (15%), Positives = 107/341 (31%), Gaps = 83/341 (24%)
Query: 519 SVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
+V ++ L EGGF VY+ + + +G+E A+KRL + + + E+ + K
Sbjct: 22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKK 81
Query: 578 LQ-HRNLVRLLGCCIEQGEK-------ILIYEYMVNKSLDVFLFDPTKKHLLG----WQL 625
L H N+V+ E+ L+ + L FL + L ++
Sbjct: 82 LSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI 141
Query: 626 RVRIIDGIA--------------------QDQHMNPKISDFGMARMFGGDELQGNTKRI- 664
+ + K+ DFG A + +
Sbjct: 142 FYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRR 201
Query: 665 ---------VGTYGYMSPEYALEGVFSV--------KSDVFSFGVLMLEILSSKKNTGVY 707
T Y +PE + + K D+++ G ++ + +
Sbjct: 202 ALVEEEITRNTTPMYRTPE-----IIDLYSNFPIGEKQDIWALGCILYLL--------CF 248
Query: 708 NTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY----INVALLCVQENAEDRP 763
F ++ + S+P ++ +Q N E+R
Sbjct: 249 RQHPFE--------------DGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERL 294
Query: 764 TMSDVVSMINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTS 804
++++VV + + P T + +N Y S + S
Sbjct: 295 SIAEVVHQLQEIAAARNVNPKSPITELLE-QNGGYGSATLS 334
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 5e-15
Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 41/213 (19%)
Query: 519 SVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRL-SNQSGQGLKEFKNEM-MLI 575
S+ ++ +LG G +G V K R + +GQ +AVKR+ + + Q K ++ + +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
+ V G +G+ + E M + SLD F K G + I+ IA
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDK---GQTIPEDILGKIAV 116
Query: 636 ---------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668
+ K+ DFG++ D++ + G
Sbjct: 117 SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDDVAKDID--AGCK 173
Query: 669 GYMSPE----YALEGVFSVKSDVFSFGVLMLEI 697
YM+PE + +SVKSD++S G+ M+E+
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
E F + KLGEG +G VYK GQ VA+K++ + L+E E+ ++ + +
Sbjct: 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPH 85
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSL-DVFLFDPT-----------KKHLLGWQL--RVR 628
+V+ G + + ++ EY S+ D+ + L G + +R
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 629 II------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
I I + + K++DFG+A + NT ++GT +M+PE E ++
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT--VIGTPFWMAPEVIQEIGYN 203
Query: 683 VKSDVFSFGVLMLE 696
+D++S G+ +E
Sbjct: 204 CVADIWSLGITAIE 217
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 75.5 bits (185), Expect = 1e-14
Identities = 27/315 (8%), Positives = 60/315 (19%), Gaps = 69/315 (21%)
Query: 513 PLFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL---SNQSGQGLKEF 568
+ ++ + L G V+ R + ++ A+K + S L+
Sbjct: 50 ETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERL 109
Query: 569 KNEMMLIAKLQHRNLVRLLGCC--------------------------IEQGEKILIYEY 602
A+L + +L+
Sbjct: 110 HEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA 169
Query: 603 MV---NKSLDVFLFDPTKKHLLGWQLR----VRIIDGIAQ------------------DQ 637
F + G ++I A
Sbjct: 170 ASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMP 229
Query: 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL--EGVFSVKSDVFSFGVLML 695
+ D G Y E+ F+ + + G+ +
Sbjct: 230 DGRLMLGDVSALWKVG-----TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIY 284
Query: 696 EILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCV 755
+ + R + LP V+ + L
Sbjct: 285 RVW-----CLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNF 339
Query: 756 QENAEDRPTMSDVVS 770
+ R + +
Sbjct: 340 --DRRRRLLPLEAME 352
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 2e-14
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 40/205 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQS--GQGLKE-FKNEMMLIAKLQH 580
E+F + + LG+G F VY+ + G EVA+K + ++ G+ + +NE+ + +L+H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 581 RNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVR-----IID 631
+++ L E + L+ E N + K R II
Sbjct: 71 PSILELYN-YFEDSNYVYLVLEMCHNGE----MNRYLKNR--VKPFSENEARHFMHQIIT 123
Query: 632 GIA------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
G+ ++MN KI+DFG+A + T + GT Y+SP
Sbjct: 124 GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISP 181
Query: 674 EYALEGVFSVKSDVFSFGVLMLEIL 698
E A ++SDV+S G + +L
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLL 206
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 2e-14
Identities = 47/217 (21%), Positives = 84/217 (38%), Gaps = 50/217 (23%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS-------------NQSGQGLKEFK 569
E++ KLG G +G V + E A+K + + +E
Sbjct: 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94
Query: 570 NEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL------- 620
NE+ L+ L H N+++L ++ L+ E+ L F+ +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQIINRHKFDECDAAN 150
Query: 621 LGWQLRVRIID-----GIA-------------QDQHMNPKISDFGMARMFGGDELQGNTK 662
+ Q+ + I I ++ +N KI DFG++ F D +
Sbjct: 151 IMKQI-LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL---R 206
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+GT Y++PE L+ ++ K DV+S GV+M +L
Sbjct: 207 DRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLC 242
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 2e-14
Identities = 39/204 (19%), Positives = 76/204 (37%), Gaps = 36/204 (17%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK-----RLSNQSGQGLKEFKNEMMLIAK 577
+ + + +G+G F V + GQ+ AVK + ++ G ++ K E +
Sbjct: 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYM---------VNKSLDVFLFDPTKKHLLGWQLRVR 628
L+H ++V LL G +++E+M V ++ F++ Q+ +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI-LE 141
Query: 629 IID-----GIA-------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
+ I ++ K+ FG+A G VGT +
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--GLVAGGRVGTPHF 199
Query: 671 MSPEYALEGVFSVKSDVFSFGVLM 694
M+PE + DV+ GV++
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVIL 223
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 2e-14
Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 40/203 (19%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHR 581
+ F + KLG G FG V+ +G E +K ++ ++S +++ + E+ ++ L H
Sbjct: 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHLLGW-------QLRVRIIDG 632
N++++ + ++ E L + + + +L ++++
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGEL----LERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 633 IA---------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
+A H KI DFG+A +F DE GT YM
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYM 193
Query: 672 SPEYALEGVFSVKSDVFSFGVLM 694
+PE + + K D++S GV+M
Sbjct: 194 APE-VFKRDVTFKCDIWSAGVVM 215
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 2e-14
Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 43/202 (21%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
+ +++++ +G G +G V A K++ + + FK E+ ++ L H N
Sbjct: 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQLRVRIIDGI 633
++RL + + L+ E L F+ K+ + ++ +
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGEL----FERVVHKRVFRESDAARIMKD----VLSAV 119
Query: 634 A---------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
A K+ DFG+A F ++ + VGT Y+S
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM---RTKVGTPYYVS 176
Query: 673 PEYALEGVFSVKSDVFSFGVLM 694
P+ LEG++ + D +S GV+M
Sbjct: 177 PQ-VLEGLYGPECDEWSAGVMM 197
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-14
Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 43/211 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN--------EMMLI 575
+ + +KLGEG +G VYK + + VA+KR+ L+ + E+ L+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR------LEHEEEGVPGTAIREVSLL 87
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYM---VNKSLD--VFLFDPTKKHLLGWQL----- 625
+LQHRN++ L LI+EY + K +D + K L +QL
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFL-YQLINGVN 146
Query: 626 ---RVRI-----------IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
R + + KI DFG+AR F G ++ T I+ T Y
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEII-TLWYR 204
Query: 672 SPEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
PE L +S D++S + E+L
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-14
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 30/200 (15%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
E + I +LG+G FG VYK + G A K + +S + L+++ E+ ++A H
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV--------------- 627
+V+LLG G+ ++ E+ ++D + + L Q++V
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 628 RII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE-----YA 676
RII + + +++DFG++ + ++ +GT +M+PE
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETM 194
Query: 677 LEGVFSVKSDVFSFGVLMLE 696
+ + K+D++S G+ ++E
Sbjct: 195 KDTPYDYKADIWSLGITLIE 214
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 3e-14
Identities = 43/194 (22%), Positives = 90/194 (46%), Gaps = 22/194 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHR 581
E F+ K+G+G FG V+KG + VA+K + + + +++ + E+ ++++
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL-DVFLFDP---------TKKHLLGWQL--RVRI 629
+ + G ++ + +I EY+ S D+ P ++ L G +
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 630 I------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I + +H K++DFG+A +++ NT VGT +M+PE + +
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 198
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 199 KADIWSLGITAIEL 212
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 3e-14
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 45/204 (22%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQH 580
E ++I LG+G FG V K + + QE AVK + ++ + E+ L+ KL H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQLRVRIID 631
N+++L + ++ E LFD +K + Q +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFSEHDAARIIKQ----VFS 132
Query: 632 GIA---------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
GI +++ + KI DFG++ F + K +GT Y
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYY 189
Query: 671 MSPEYALEGVFSVKSDVFSFGVLM 694
++PE L G + K DV+S GV++
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVIL 212
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 5e-14
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 33/206 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRN 582
+++ +Q +G G V ++VA+KR++ + Q + E E+ +++ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSL-DVFLFDPTKKHLLGWQLRVRIIDGIAQDQ---- 637
+V + + E L+ + + S+ D+ K L I I ++
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 638 ---HMNPKI-------------------SDFGM-ARMFGGDELQGNTKR--IVGTYGYMS 672
H N +I +DFG+ A + G ++ N R VGT +M+
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 673 PEYALEGV-FSVKSDVFSFGVLMLEI 697
PE + + K+D++SFG+ +E+
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIEL 220
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 1e-13
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 47/212 (22%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN--------EMMLI 575
+ + K+GEG +G V+K + + VA+KR+ L + E+ L+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLL 55
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYM------VNKSLDVFLFDPTKKHLLGWQLRVRI 629
+L+H+N+VRL + L++E+ S + L K L +QL
Sbjct: 56 KELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL-FQL---- 110
Query: 630 IDGIA--------------Q----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
+ G+ Q +++ K+++FG+AR F G ++ + +V T Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVV-TLWYR 168
Query: 672 SPEYAL-EGVFSVKSDVFSFGVLMLEILSSKK 702
P+ ++S D++S G + E+ ++ +
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 1e-13
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 46/210 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN--------EMMLIA 576
E + K+GEG +G VYK + G+ VA+KR+ L E+ L+
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYM------VNKSLDVFLFDPTKKHLLGWQLRVRII 630
+L H N+V L+ + L++E+M V L D K L +QL +
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL-YQL----L 129
Query: 631 DGIA--------------Q----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
G+A Q + K++DFG+AR F G ++ T +V T Y +
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRA 187
Query: 673 PEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
P+ + +S D++S G + E+++ K
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 3e-13
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQ 579
+ FS ++G G FG VY R + N + VA+K++S QS + ++ E+ + KL+
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----------TKKHLLGWQL--R 626
H N ++ GC + + L+ EY + + D+ T L G
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 627 VRII------DGIAQDQHMNPKISDFGM-ARMFGGDELQGNTKR--IVGTYGYMSPE--- 674
+I I + K+ DFG + M VGT +M+PE
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---------APANSFVGTPYWMAPEVIL 223
Query: 675 YALEGVFSVKSDVFSFGVLMLEI 697
EG + K DV+S G+ +E+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIEL 246
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 44/207 (21%), Positives = 79/207 (38%), Gaps = 40/207 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRL-SNQSGQGLKEFKNEM-MLIAKLQHR 581
E+ ++G G +G V K +GQ +AVKR+ S + K+ ++ +++
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------ 635
+V+ G +G+ + E M + S D F +L + I+ I
Sbjct: 82 YIVQFYGALFREGDCWICMELM-STSFDKFY--KYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 636 ---------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
D+ N K+ DFG++ + G YM+PE
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD---AGCRPYMAPE 195
Query: 675 ----YALEGVFSVKSDVFSFGVLMLEI 697
A + V+SDV+S G+ + E+
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYEL 222
|
| >1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 3e-13
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 19/126 (15%)
Query: 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVD 101
+ LT + G++L + + Y T VW +N
Sbjct: 2 NLLTNGEGLYAGQSLDVE--PYHFIMQEDCNL------VLYD--HSTSVWASNTGIL-GK 50
Query: 102 KNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYL 161
K + + GN V+ + ++W+S+ R N V L ++GN+VI + +
Sbjct: 51 KGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD--------I 102
Query: 162 WQSFDY 167
W + Y
Sbjct: 103 WSTGTY 108
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 70.8 bits (173), Expect = 5e-13
Identities = 34/305 (11%), Positives = 76/305 (24%), Gaps = 93/305 (30%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQ--------- 579
LG+ + G+ V +K+ K E++ + L+
Sbjct: 81 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140
Query: 580 ----------------HRNLVRLLGCC--IEQGEKILIYEYMVNKSLDVF--LFDPTKKH 619
+ ++R+ + + +Y M + L + H
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200
Query: 620 -LLGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDE 656
L R+++ + + DQ ++ F
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD---- 256
Query: 657 LQGNTKRIVGTYGYMSPEYAL-----------EGVFSVKSDVFSFGVLMLEILSSKKNTG 705
G + G+ PE + + D ++ G+++ I
Sbjct: 257 --GARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW-----CA 309
Query: 706 VYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTM 765
D A + + ++ ++P VR + L EDR
Sbjct: 310 DL---PIT----------KDAALGGSEWIFRSCKNIPQPVRALLEGFLRY--PKEDRLLP 354
Query: 766 SDVVS 770
+
Sbjct: 355 LQAME 359
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 5e-13
Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 49/209 (23%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK-----RLSNQSGQGLKE-FKNEMMLIA 576
+ + I +LG G F V K R G E A K + +E + E+ ++
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQLRV 627
++ H N++ L + + +LI E + LFD K+ L Q
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQ--- 123
Query: 628 RIIDGIA----------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIV 665
I+DG+ + K+ DFG+A K I
Sbjct: 124 -ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIF 179
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
GT +++PE +++D++S GV+
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 6e-13
Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 39/203 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS----NQSGQGLKEFKNEMMLIAKLQ 579
E+F I LG+G FG VY R + +A+K L ++G + + E+ + + L+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLR 67
Query: 580 HRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFL-----FDPTKKHLLGWQLRVRIIDGI 633
H N++RL G ++ LI EY ++ L FD + + + + +
Sbjct: 68 HPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE----LANAL 122
Query: 634 A------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
+ KI+DFG + + GT Y+ PE
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--D--LCGTLDYLPPEM 178
Query: 676 ALEGVFSVKSDVFSFGVLMLEIL 698
+ K D++S GVL E L
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFL 201
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 9e-13
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 46/210 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN--------EMMLIA 576
E + K+GEG +G VYK + G+ A+K++ L++ E+ ++
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILK 55
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYM------VNKSLDVFLFDPTKKHLLGWQLRVRII 630
+L+H N+V+L + +L++E++ + + L T K L QL +
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-LQL----L 110
Query: 631 DGIA--------------Q----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
+GIA Q ++ KI+DFG+AR F G ++ T IV T Y +
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRA 168
Query: 673 PEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
P+ + +S D++S G + E+++
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 1e-12
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 45/215 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG-----LKEFKNEMMLI 575
+++ F KLG G + VYKG G VA+K + S +G ++E L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREIS----LM 57
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDVFLFDPTKKHL-------LGWQL 625
+L+H N+VRL + + L++E+M + K +D T + L WQL
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 626 RVRIIDGIA--------------Q----DQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
+ G+A Q ++ K+ DFG+AR F G + + +V T
Sbjct: 118 ----LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVV-T 171
Query: 668 YGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
Y +P+ + +S D++S G ++ E+++ K
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 38/232 (16%), Positives = 80/232 (34%), Gaps = 45/232 (19%)
Query: 501 GDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRL-S 558
G K + A + ++G G G V+K R G +AVK++
Sbjct: 1 GSSGSSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRR 60
Query: 559 NQSGQGLKEFKNEM-MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK 617
+ + + K ++ +++ +V+ G I + + E M +
Sbjct: 61 SGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKL------ 113
Query: 618 KHLLGWQLRVRIIDGIAQ---------------------------DQHMNPKISDFGMAR 650
K + + RI+ + D+ K+ DFG++
Sbjct: 114 KKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISG 173
Query: 651 MFGGDELQGNTKRIVGTYGYMSPE-----YALEGVFSVKSDVFSFGVLMLEI 697
D+ + G YM+PE + + +++DV+S G+ ++E+
Sbjct: 174 RL-VDDKAKDR--SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-12
Identities = 40/218 (18%), Positives = 70/218 (32%), Gaps = 67/218 (30%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK-----RLSNQSGQGLKE-FKNEMMLIA 576
+ + I +LG G F V K R G E A K + +E + E+ ++
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----- 631
++ H N++ L + + +LI E + LFD +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGE----LFD-------------FLAQKESLS 113
Query: 632 ---------------------GIA--------------QDQHMNPKISDFGMARMFGGDE 656
IA + K+ DFG+A
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
K I GT +++PE +++D++S GV+
Sbjct: 174 E---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 2e-12
Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 60/221 (27%)
Query: 529 IQSKLGEGGFGPVYKGR---LLNGQEVAVKRLSN----QSGQGLKEFKNEMMLIAKLQHR 581
K+G G +G VYK + + ++ A+K++ S E+ L+ +L+H
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR------EIALLRELKHP 78
Query: 582 NLVRLLGCCIEQGEKI--LIYEYM--------------VNKSLDVFLFDPTKKHLLGWQL 625
N++ L + ++ L+++Y V L K LL +Q+
Sbjct: 79 NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLL-YQI 137
Query: 626 RVRIIDGIA----------------------QDQHMNPKISDFGMARMFG--GDELQGNT 661
+DGI + KI+D G AR+F L
Sbjct: 138 ----LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193
Query: 662 KRIVGTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
+V T+ Y +PE L ++ D+++ G + E+L+S+
Sbjct: 194 PVVV-TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 39/231 (16%), Positives = 78/231 (33%), Gaps = 72/231 (31%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS-----------------NQSGQGLKE 567
++ I L +G F + + + A+K+ +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 568 FKNEMMLIAKLQHRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFD-PTKKHLLGWQL 625
FKNE+ +I +++ + G I +++ +IYEYM N S+ +L
Sbjct: 90 FKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSI----LKFDEYFFVLDKNY 144
Query: 626 RVR------------IIDGIA-------------------QDQHMNPKISDFGMARMFGG 654
+++ + D++ K+SDFG +
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVK-------SDVFSFGVLMLEIL 698
+++G GTY +M PE FS + D++S G+ + +
Sbjct: 205 KKIKG----SRGTYEFMPPE-----FFSNESSYNGAKVDIWSLGICLYVMF 246
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 55/221 (24%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKE-FKN----EMMLIA 576
+ +K+G+G FG V+K R GQ+VA+K + N+ KE F E+ ++
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-----KEGFPITALREIKILQ 71
Query: 577 KLQHRNLVRLLGCCIEQGEKI--------LIYEYMVN------KSLDVFLFDPTKKHLLG 622
L+H N+V L+ C + L++++ + ++ V K ++
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM- 130
Query: 623 WQLRVRIIDGIAQ------------------DQHMNPKISDFGMARMFG---GDELQGNT 661
L ++G+ + K++DFG+AR F + T
Sbjct: 131 QML----LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYT 186
Query: 662 KRIVGTYGYMSPEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
R+V T Y PE L E + D++ G +M E+ +
Sbjct: 187 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 226
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 2e-12
Identities = 41/211 (19%), Positives = 73/211 (34%), Gaps = 61/211 (28%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
+ F LG G F V+ + L G+ A+K + +NE+ ++ K++H N
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------- 631
+V L L+ + + LFD RI++
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGE----LFD-------------RILERGVYTEKDASL 110
Query: 632 ---------------GIA-------------QDQHMNPKISDFGMARMFGGDELQGNTKR 663
GI +++ I+DFG+++M +
Sbjct: 111 VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM----ST 166
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
GT GY++PE + +S D +S GV+
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 2e-12
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 47/211 (22%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKN----EMMLIAK 577
E + +GEG +G V K R G+ VA+K S+ K K E+ L+ +
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD----KMVKKIAMREIKLLKQ 80
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDVF--LFDPTK-KHLLGWQLRVRIID 631
L+H NLV LL C ++ L++E++ + L++F D + L +Q+ I+
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYL-FQI----IN 135
Query: 632 GIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
GI Q K+ DFG AR + + T Y +P
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVA-TRWYRAP 193
Query: 674 EYALEGVF---SVKSDVFSFGVLMLEILSSK 701
E + V +V DV++ G L+ E+ +
Sbjct: 194 ELLVGDVKYGKAV--DVWAIGCLVTEMFMGE 222
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 2e-12
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 19/123 (15%)
Query: 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVD 101
++L+ + G +L + L + Y VW +N
Sbjct: 2 NSLSSPNSLFTGHSL-EVGPSYRLIMQGDCNF------VLYDS--GKPVWASNTGGLGSG 52
Query: 102 KNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYL 161
L N GNLV+ +QSN IW + + + + V L + N+VI +
Sbjct: 53 CRLTLH--NNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGPV--------V 102
Query: 162 WQS 164
W +
Sbjct: 103 WAT 105
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 51/233 (21%), Positives = 87/233 (37%), Gaps = 46/233 (19%)
Query: 498 EADGDGKDKSKDSSLPLFSFASVTAATENFS------IQSKLGEGGFGPVYKGR-LLNGQ 550
+ F VTA + LG G FG V+K G
Sbjct: 56 SKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGL 115
Query: 551 EVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDV 610
++A K + + + +E KNE+ ++ +L H NL++L + + +L+ EY+
Sbjct: 116 KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE--- 172
Query: 611 FLFD--PTKKHLLGWQLRVRII----DGIAQDQHMNPK---------------------- 642
LFD + + L + + +GI +HM+
Sbjct: 173 -LFDRIIDESYNLTELDTILFMKQICEGI---RHMHQMYILHLDLKPENILCVNRDAKQI 228
Query: 643 -ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
I DFG+AR + E K GT +++PE S +D++S GV+
Sbjct: 229 KIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 4e-12
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 42/208 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSG---QGLKEFKNEMMLIAKL 578
E + KLGEG + VYKG+ L VA+K RL ++ G ++E L+ L
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVS----LLKDL 57
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM------VNKSLDVFLFDPTKKHLLGWQLRVRIIDG 632
+H N+V L + L++EY+ + K L +QL + G
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFL-FQL----LRG 112
Query: 633 IA--------------Q----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+A Q ++ K++DFG+AR + +V T Y P+
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAK-SIPTKTYDNEVV-TLWYRPPD 170
Query: 675 YAL-EGVFSVKSDVFSFGVLMLEILSSK 701
L +S + D++ G + E+ + +
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGR 198
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 4e-12
Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 55/210 (26%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--------RLSNQSGQGLKEFKNEMMLIA 576
+S S LG G FG V+ +EV VK L + E+ +++
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 577 KLQHRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHL-------LGWQLRVR 628
+++H N++++L E L+ E + LD+F F L + Q
Sbjct: 85 RVEHANIIKVLD-IFENQGFFQLVMEKHGS-GLDLFAFIDRHPRLDEPLASYIFRQ---- 138
Query: 629 IIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
++ + + K+ DFG A +L GT Y
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEY 195
Query: 671 MSPEYALEGVFSVKS------DVFSFGVLM 694
+PE V +++S GV +
Sbjct: 196 CAPE-----VLMGNPYRGPELEMWSLGVTL 220
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 5e-12
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 56/217 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKN--------EMM 573
+ + LGEG F VYK R Q VA+K +L ++S E K+ E+
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS-----EAKDGINRTALREIK 64
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYM------VNKSLDVFLFDPTKKHLLGWQL-- 625
L+ +L H N++ LL + L++++M + K + L K +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYM-LMTLQ 123
Query: 626 ------RVRIIDGIAQDQH---------MNP----KISDFGMARMFGGDELQGNTKRIVG 666
+ I+ H ++ K++DFG+A+ F G + T ++V
Sbjct: 124 GLEYLHQHWIL-------HRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYTHQVV- 174
Query: 667 TYGYMSPEYALEG--VFSVKSDVFSFGVLMLEILSSK 701
T Y +PE L G ++ V D+++ G ++ E+L
Sbjct: 175 TRWYRAPE-LLFGARMYGVGVDMWAVGCILAELLLRV 210
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 5e-12
Identities = 48/315 (15%), Positives = 85/315 (26%), Gaps = 73/315 (23%)
Query: 518 ASVTAATENFSIQSKLGEG--GFGPVYKGR-LLNGQEVAVKR--LSNQSGQGLKEFKNEM 572
+S + + + +G+G V R G+ V V+R L S + + + E+
Sbjct: 18 SSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGEL 77
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDG 632
+ H N+V I E ++ +M S D H + + I
Sbjct: 78 HVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS----AKDLICTHFMD-GMNELAIAY 132
Query: 633 IAQDQ-------HMNPKI-------------------SDFGMARMFGGDELQGNT----- 661
I Q H + S +
Sbjct: 133 ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP 192
Query: 662 KRIVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEI---------------------- 697
K V ++SPE + + + KSD++S G+ E+
Sbjct: 193 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG 252
Query: 698 ----LSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY----IN 749
L A S + P + S P + +
Sbjct: 253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHH 312
Query: 750 VALLCVQENAEDRPT 764
C+Q N + RP+
Sbjct: 313 FVEQCLQRNPDARPS 327
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 9e-12
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 45/208 (21%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQH 580
++N+ ++ +LG+G F V + G E A K + S + ++ + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQLRVRIID 631
N+VRL E+ L+++ + LF+ ++ Q I++
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQ----ILE 116
Query: 632 GIA---------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
IA + + K++DFG+A E GT GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGY 173
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL 698
+SPE + +S D+++ GV +L IL
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGV-ILYIL 200
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 9e-12
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 44/204 (21%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQH 580
++N+ ++ +LG+G F V + G E A K + S + ++ + E + KLQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQLRVRIID 631
N+VRL E+ L+++ + LF+ ++ Q I++
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQ----ILE 139
Query: 632 GIA---------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
IA + + K++DFG+A E GT GY
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGY 196
Query: 671 MSPEYALEGVFSVKSDVFSFGVLM 694
+SPE + +S D+++ GV++
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVIL 220
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 9e-12
Identities = 40/236 (16%), Positives = 75/236 (31%), Gaps = 66/236 (27%)
Query: 502 DGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ 560
+ P +++ I +LG G FG V++ G A K +
Sbjct: 134 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 193
Query: 561 SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM---------VNKS---- 607
+ + E+ ++ L+H LV L + E ++IYE+M ++
Sbjct: 194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS 253
Query: 608 -------------------------LDV----FLFDPTKKHLLGWQLRVRIIDGIAQDQH 638
LD+ +F + + +++ID
Sbjct: 254 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN------ELKLID------- 300
Query: 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
FG+ + + K GT + +PE A +D++S GVL
Sbjct: 301 -------FGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 1e-11
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Query: 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIV 100
+D L + G +L + + + Y + VW + N
Sbjct: 1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCNL------VLYD--NNRAVWASGTNGK-- 48
Query: 101 DKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESY 160
VL + N GNLV+ + + IW+SN +R+ N L + N+VI DNS +
Sbjct: 49 ASGCVLKMQNDGNLVIYS-GSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSN-----NA 102
Query: 161 LWQS 164
+W +
Sbjct: 103 IWAT 106
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 5e-05
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 96 NSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSN 155
+ + + + N NLVL + +N +W+S + + V ++ ++GNLVI S +
Sbjct: 13 GGSLAEGGYLFIIQNDCNLVLYD-NNRAVWASGTNGKASGCVLKMQNDGNLVIYSGSRAI 71
Query: 156 STESYLWQSFDY 167
+ Q+ +Y
Sbjct: 72 WASNTNRQNGNY 83
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 54/213 (25%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS--------NQSGQGLKEFKNEMML 574
+ + + LG G G V ++VA++ +S + + E+ +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQL 625
+ KL H ++++ + + ++ E M LFD K L +Q
Sbjct: 194 LKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQ- 247
Query: 626 RVRIIDGIA---------------------QDQHMNPKISDFGMARMFGGDELQGNTKRI 664
++ + Q++ KI+DFG +++ G L + +
Sbjct: 248 ---MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTL 301
Query: 665 VGTYGYMSPE---YALEGVFSVKSDVFSFGVLM 694
GT Y++PE ++ D +S GV++
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 43/196 (21%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLS----NQSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
LGEG +G V + AVK L + G K E+ L+ +L+H+N+++L+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 588 G-CCIEQGEKI-LIYEYMVNKSLDVFLFD-PTKKHLLGWQLR---VRIIDGIA------- 634
E+ +K+ ++ EY V + + D +K Q ++IDG+
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130
Query: 635 -----------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS- 682
KIS G+A + G+ + PE + +
Sbjct: 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE-----IANG 185
Query: 683 ------VKSDVFSFGV 692
K D++S GV
Sbjct: 186 LDTFSGFKVDIWSAGV 201
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 38/213 (17%), Positives = 78/213 (36%), Gaps = 54/213 (25%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK-----RLSNQSGQGLKE---FKNEMML 574
+ + + LG G G V ++VA+K + + S + + E+ +
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQL 625
+ KL H ++++ + + ++ E M LFD K L +Q
Sbjct: 69 LKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQ- 122
Query: 626 RVRIIDGIA---------------------QDQHMNPKISDFGMARMFGGDELQGNTKRI 664
++ + Q++ KI+DFG +++ G L + +
Sbjct: 123 ---MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTL 176
Query: 665 VGTYGYMSPE---YALEGVFSVKSDVFSFGVLM 694
GT Y++PE ++ D +S GV++
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 2e-11
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 55/212 (25%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK-----RLSNQSGQGLKE-FKNEMMLIA 576
+++ + +LG G F V K R G+E A K RLS+ +E + E+ ++
Sbjct: 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--PTKKHL-------LGWQLRV 627
+++H N++ L + + +LI E + LFD K+ L Q
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGE----LFDFLAEKESLTEDEATQFLKQ--- 116
Query: 628 RIIDGIAQDQHM-----------------------NPKI--SDFGMARMFGGDELQGNTK 662
I+DG+ ++ NP+I DFG+A K
Sbjct: 117 -ILDGV---HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFK 169
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
I GT +++PE +++D++S GV+
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 3e-11
Identities = 49/206 (23%), Positives = 78/206 (37%), Gaps = 54/206 (26%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRN 582
N+ + +G+G F V R +L G+EVA+K + + L++ E+ ++ L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 583 LVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKH---------LLGWQLRVRIIDG 632
+V+L IE + + LI EY +FD H Q I+
Sbjct: 76 IVKLFE-VIETEKTLYLIMEYASGGE----VFDYLVAHGRMKEKEARSKFRQ----IVSA 126
Query: 633 IA------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+ D MN KI+DFG + F G Y +PE
Sbjct: 127 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPE 183
Query: 675 YALEGVFS------VKSDVFSFGVLM 694
+F + DV+S GV++
Sbjct: 184 -----LFQGKKYDGPEVDVWSLGVIL 204
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 3e-11
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 47/211 (22%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN--------EMMLI 575
E + K+GEG +G V+K R GQ VA+K+ E E+ ++
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF------LESEDDPVIKKIALREIRML 56
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDVF--LFDPTK-KHLLGWQLRVRI 629
+L+H NLV LL + L++EY V LD + K + WQ
Sbjct: 57 KQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSIT-WQT---- 111
Query: 630 IDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
+ + +H K+ DFG AR+ + T Y
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVA-TRWYR 169
Query: 672 SPEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
SPE + + + DV++ G + E+LS
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 3e-11
Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 65/222 (29%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRN 582
++ +G G FG V++ +L+ EVA+K++ K FKN E+ ++ ++H N
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPN 93
Query: 583 LVRLLGCCIEQGEKI------LIYEYM---VNKSLDVFL-----FDPTKKHLLGWQL--- 625
+V L G+K L+ EY+ V ++ + L +QL
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 626 -----RVRIIDGIAQDQH---------MNP-----KISDFGMARMFGGDELQGNTKRIVG 666
+ I H ++P K+ DFG A++ + N I
Sbjct: 154 LAYIHSIGIC-------HRDIKPQNLLLDPPSGVLKLIDFGSAKIL--IAGEPNVSYICS 204
Query: 667 TYGYMSPE-------YALEGVFSVKSDVFSFGVLMLEILSSK 701
Y Y +PE Y + D++S G +M E++ +
Sbjct: 205 RY-YRAPELIFGATNY------TTNIDIWSTGCVMAELMQGQ 239
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 3e-11
Identities = 46/203 (22%), Positives = 75/203 (36%), Gaps = 39/203 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS----NQSGQGLKEFKNEMMLIAKLQ 579
++F I LG+G FG VY R N +A+K L + G + + E+ + + L+
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLR 72
Query: 580 HRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFL-----FDPTKKHLLGWQLRVRIIDGI 633
H N++R+ ++I L+ E+ L L FD + + + D +
Sbjct: 73 HPNILRMYN-YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE----LADAL 127
Query: 634 A------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
KI+DFG + T + GT Y+ PE
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR--RT--MCGTLDYLPPEM 183
Query: 676 ALEGVFSVKSDVFSFGVLMLEIL 698
K D++ GVL E L
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFL 206
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 30/152 (19%)
Query: 636 DQHMNPKISDFGMARMFGGDELQGNTK----------RIVGTYGYMSPEYALEGVFSVKS 685
K+ DFG+ DE + VGT YMSPE +S K
Sbjct: 198 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKV 257
Query: 686 DVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745
D+FS G+++ E+L Y+ + + +N + L E +
Sbjct: 258 DIFSLGLILFELL--------YSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMM---- 305
Query: 746 RYINVALLCVQENAEDRPTMSDVVSMINNELF 777
+ + + +RP +D+ I N +F
Sbjct: 306 --VQ---DMLSPSPTERPEATDI---IENAIF 329
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 8e-08
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRN 582
+F +G GGFG V++ + ++ A+KR+ ++ E+ +AKL+H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR--VRIIDGIAQDQHMN 640
+VR +E + E D P +R +D + +
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 641 PKISDFGMARMF 652
++
Sbjct: 126 QLQPSSPKVYLY 137
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 4e-11
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQG-LKEFKNEM-MLIA 576
+ + LG G FG V + + VAVK L + + +E+ +LI
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81
Query: 577 KLQHRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFL 612
H N+V LLG C + G + +I E+ +L +L
Sbjct: 82 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 5e-10
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 33/151 (21%)
Query: 636 DQHMNPKISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
+ KI DFG+AR D +G+ + + +M+PE + V++++SDV+SFGV
Sbjct: 227 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGV 283
Query: 693 LMLEILSSKKN--TGV-YNTDSFNLLGHAWSLCK----NDRAHELMDPVLQNEVSLPMLV 745
L+ EI S + GV + + L + ++ M
Sbjct: 284 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM-------------- 329
Query: 746 RYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L C RPT S++V + N L
Sbjct: 330 ------LDCWHGEPSQRPTFSELVEHLGNLL 354
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 4e-11
Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 20/123 (16%)
Query: 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVD 101
+ L + +L + + L + + YQ +W +N +
Sbjct: 3 NVLLSGQTLHADHSLQA--GAYTLTIQNKCNL------VKYQN--GRQIWASNTDRR--G 50
Query: 102 KNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYL 161
LT+ + GNLV+ + +N +W S + L +G VI L
Sbjct: 51 SGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGPV--------L 102
Query: 162 WQS 164
W
Sbjct: 103 WSL 105
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 68/224 (30%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHR 581
+++ +G G FG VY+ +L +G+ VA+K++ K FKN E+ ++ KL H
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHC 107
Query: 582 NLVRLLGCCIEQGEKI------LIYEYM---VNKSLDVF------LFDPTKKHLLGWQL- 625
N+VRL GEK L+ +Y+ V + + L K + +QL
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLF 166
Query: 626 -------RVRIIDGIAQDQH---------MNP-----KISDFGMARMFGGDELQGNTKRI 664
I H ++P K+ DFG A+ E N I
Sbjct: 167 RSLAYIHSFGIC-------HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYI 217
Query: 665 VGTYGYMSPE-------YALEGVFSVKSDVFSFGVLMLEILSSK 701
Y Y +PE Y + DV+S G ++ E+L +
Sbjct: 218 CSRY-YRAPELIFGATDY------TSSIDVWSAGCVLAELLLGQ 254
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 2e-10
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 54/198 (27%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVRLLGCC 590
LGEG +G V + + VAVK + + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73
Query: 591 IEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLG-----------WQLRVRIIDGIA---- 634
+G L EY LFD + Q ++ G+
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPD--IGMPEPDAQRFFHQ----LMAGVVYLHG 123
Query: 635 --------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
D+ N KISDFG+A +F + + ++ GT Y++PE +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-----L 178
Query: 681 FS------VKSDVFSFGV 692
DV+S G+
Sbjct: 179 LKRREFHAEPVDVWSCGI 196
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 52/230 (22%)
Query: 504 KDKSKDSSLPLFSFASVTAATENFSIQSK-LGEGGFGPVYKGR-LLNGQEVAVK--RLSN 559
D F S+ + + SK LG G F V + GQE A K +
Sbjct: 7 HSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR 66
Query: 560 QSGQGLKEFKNEMMLIAKLQHR-NLVRLLGCCIEQGEKILIYEYM---------VNKSLD 609
+ E +E+ ++ + ++ L E ILI EY + + +
Sbjct: 67 RGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAE 126
Query: 610 VFLFDPTKK---HLLGWQLRVR-IIDGIA---------------------QDQHMNPKIS 644
+ ++ L ++ I++G+ + KI
Sbjct: 127 MV----SENDVIRL------IKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIV 176
Query: 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
DFGM+R G + I+GT Y++PE + +D+++ G++
Sbjct: 177 DFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 507 SKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGL 565
S SL +++ F + +G G +G VYKGR + GQ A+K + + +G
Sbjct: 6 SPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDEE 64
Query: 566 KEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI------LIYEYMVNKSL-DVFLFDPTK 617
+E K E+ ++ K HRN+ G I++ L+ E+ S+ D L TK
Sbjct: 65 EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD--LIKNTK 122
Query: 618 KHLLG-WQLRV---------------RII------DGIAQDQHMNPKISDFGMARMFGGD 655
+ L + ++I + ++ K+ DFG++
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182
Query: 656 ELQGNTKRIVGTYGYMSPE-----YALEGVFSVKSDVFSFGVLMLEI 697
+ NT +GT +M+PE + + KSD++S G+ +E+
Sbjct: 183 VGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 67/214 (31%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
E + I LG G FG V++ + + K + G K E+ ++ +HRN
Sbjct: 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRN 62
Query: 583 LVRLLGCCIEQGEKILIYEYM---------VNKS-------------------------- 607
++ L E ++I+E++ +
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 608 ---LDV----FLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660
D+ ++ + ++II+ FG AR +
Sbjct: 123 IGHFDIRPENIIYQTRRSS------TIKIIE--------------FGQARQLKPGDNF-- 160
Query: 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
+ + Y +PE V S +D++S G L+
Sbjct: 161 -RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 3e-10
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 49/219 (22%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKN----EMMLI 575
AT + +++G G +G VYK R +G VA+K R+ N G G E+ L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGG-GGGGLPISTVREVALL 65
Query: 576 AKLQ---HRNLVRLLGCCIEQGEKI-----LIYEYM-------VNKSLDVFLFDPTKKHL 620
+L+ H N+VRL+ C L++E++ ++K+ L T K L
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 621 LGWQLRVRIIDGIA--------------Q----DQHMNPKISDFGMARMFGGDELQGNTK 662
+ Q + G+ + K++DFG+AR++ T
Sbjct: 126 M-RQF----LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--MALTP 178
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
+V T Y +PE L+ ++ D++S G + E+ K
Sbjct: 179 VVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 54/198 (27%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVRLLGCC 590
LGEG +G V + + VAVK + + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73
Query: 591 IEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLG-----------WQLRVRIIDGIA---- 634
+G L EY LFD + Q ++ G+
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPD--IGMPEPDAQRFFHQ----LMAGVVYLHG 123
Query: 635 --------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
D+ N KISDFG+A +F + + ++ GT Y++PE +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-----L 178
Query: 681 FS------VKSDVFSFGV 692
DV+S G+
Sbjct: 179 LKRREFHAEPVDVWSCGI 196
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 4e-10
Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 19/129 (14%)
Query: 37 FSLAADTLTPTTLIRDGE-TLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANR 95
FS D P L ++ + + + + Y + +W N
Sbjct: 5 FSKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNL------VLYDN--NNPIWATNT 56
Query: 96 NSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSN 155
+ G LV++ N T+W S V+ + + V L + N+VI ++
Sbjct: 57 GGL--GNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGDA--- 111
Query: 156 STESYLWQS 164
LW +
Sbjct: 112 -----LWAT 115
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 5e-10
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 20/123 (16%)
Query: 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVD 101
+ L + GE L + R+ + Y D +W N D
Sbjct: 2 NILYSGETLSPGEFL--NNGRYVFIMQEDCNL------VLYDV--DKPIWATNTGGL--D 49
Query: 102 KNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYL 161
+ L++ + GNLV+ + N IW+SN E N V L + N+VI +
Sbjct: 50 RRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYGTA--------R 101
Query: 162 WQS 164
W +
Sbjct: 102 WAT 104
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 6e-10
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 47/215 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR--LLNGQEVAVKRL---SNQSG---QGLKEFKNEMMLIA 576
+ + +++GEG +G V+K R G+ VA+KR+ + + G ++E + +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA-VLRHLE 69
Query: 577 KLQHRNLVRLL----GCCIEQGEKI-LIYEYM-------VNKSLDVFLFDPTKKHLLGWQ 624
+H N+VRL ++ K+ L++E++ ++K + + T K ++ +Q
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM-FQ 128
Query: 625 LRVRIIDGIA--------------Q----DQHMNPKISDFGMARMFGGDELQGNTKRIVG 666
L + G+ Q K++DFG+AR++ T +V
Sbjct: 129 L----LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVV- 181
Query: 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
T Y +PE L+ ++ D++S G + E+ K
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 7e-10
Identities = 56/312 (17%), Positives = 95/312 (30%), Gaps = 96/312 (30%)
Query: 524 TENFSIQSK-LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-H 580
+ + +Q LGEG V L+ QE AVK + Q G E+ ++ + Q H
Sbjct: 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID--------- 631
RN++ L+ E+ L++E M S + I
Sbjct: 71 RNVLELIEFFEEEDRFYLVFEKMRGGS----ILS-------------HIHKRRHFNELEA 113
Query: 632 -----------------GIA-------------QDQHMNPKISDFGMARMF-----GGDE 656
GIA +Q KI DF +
Sbjct: 114 SVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSV------KSDVFSFGVLMLEILSSKKNTGV--YN 708
G+ YM+PE +E + D++S GV++ +LS G +
Sbjct: 174 STPELLTPCGSAEYMAPE-VVEAFSEEASIYDKRCDLWSLGVILYILLS-----GYPPFV 227
Query: 709 TDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM------------LVRYINVALLCVQ 756
+ G + L + + + + P L+ LL
Sbjct: 228 GRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLIS----KLLVR- 282
Query: 757 ENAEDRPTMSDV 768
+A+ R + + V
Sbjct: 283 -DAKQRLSAAQV 293
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 57/232 (24%)
Query: 507 SKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--------RL 557
++D++LP S EN+ + LG G V + +E AVK
Sbjct: 1 TRDAALP--GSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF 58
Query: 558 SNQSGQGLKE-FKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD- 614
S + Q L+E E+ ++ K+ H N+++L L+++ M L FD
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDY 114
Query: 615 -PTKKHL-------LGWQLRVRIIDGIAQ------------------DQHMNPKISDFGM 648
K L + +++ I D MN K++DFG
Sbjct: 115 LTEKVTLSEKETRKIMRA----LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 649 ARMFGGDELQGNTKRIVGTYGYMSPE------YALEGVFSVKSDVFSFGVLM 694
+ E + + GT Y++PE + + D++S GV+M
Sbjct: 171 SCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 44/212 (20%), Positives = 70/212 (33%), Gaps = 59/212 (27%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS----------NQSGQGLKEFKNEMML 574
+ + LG+GGFG V+ G L + +VA+K + + S E +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 575 IAKLQHRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHL-------LGWQLR 626
A H ++RLL E E L+ E + + D+F + K L Q
Sbjct: 92 GAGGGHPGVIRLLD-WFETQEGFMLVLERPLP-AQDLFDYITEKGPLGEGPSRCFFGQ-- 147
Query: 627 VRIIDGIAQ------------------DQHMNP-KISDFGMARMFGGDELQGNTKRIVGT 667
++ I D K+ DFG + + GT
Sbjct: 148 --VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY----TDFDGT 201
Query: 668 YGYMSPEYALEGVFS------VKSDVFSFGVL 693
Y PE S + + V+S G+L
Sbjct: 202 RVYSPPE-----WISRHQYHALPATVWSLGIL 228
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 57/210 (27%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL------SNQSGQGLKEFKNEMMLIAKL 578
+ + LG GGFG VY G + + VA+K + E++L+ K+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 579 QHR--NLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHL-------LGWQLRVR 628
++RLL E+ + LI E D+F F + L WQ
Sbjct: 104 SSGFSGVIRLLD-WFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQ---- 157
Query: 629 IIDGIAQ-------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG 669
+++ + K+ DFG + GT
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRV 213
Query: 670 YMSPEYALEGVFS------VKSDVFSFGVL 693
Y PE + V+S G+L
Sbjct: 214 YSPPE-----WIRYHRYHGRSAAVWSLGIL 238
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 42/211 (19%), Positives = 77/211 (36%), Gaps = 62/211 (29%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
++ F ++S+LG G VY+ + + A+K L + K + E+ ++ +L H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------- 631
+++L E L+ E + L FD RI++
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL----FD-------------RIVEKGYYSERDAAD 152
Query: 632 ---------------GIA-------------QDQHMNPKISDFGMARMFGGDELQGNTKR 663
GI KI+DFG++++ L K
Sbjct: 153 AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL---MKT 209
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
+ GT GY +PE + + D++S G++
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 3e-09
Identities = 45/215 (20%), Positives = 77/215 (35%), Gaps = 65/215 (30%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQH 580
TE + + +LG+G F V + +L GQE A + S + ++ + E + L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 581 RNLVRLLGCCIEQGEKILIYEYM---------VNK-----------------------SL 608
N+VRL E+G LI++ + V + +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 609 DV---------FLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659
V L K V++ D FG+A G+ Q
Sbjct: 130 GVVHRNLKPENLLLASKLKGAA-----VKLAD--------------FGLAIEVEGE--QQ 168
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
GT GY+SPE + + D+++ GV++
Sbjct: 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 3e-09
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 502 DGKDKSKDSSLPLFSFASVTAATENFS----IQSKLGEGGFGPVYKGR-LLNGQEVAVKR 556
+ DK + + V + I +LG G FG V++ G+ K
Sbjct: 24 NDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKF 83
Query: 557 LSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603
++ KNE+ ++ +L H L+ L ++ E +LI E++
Sbjct: 84 INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
KI DFG+A DE K T + +PE +D+++ GVL
Sbjct: 191 KIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG 240
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 48/212 (22%), Positives = 80/212 (37%), Gaps = 51/212 (24%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEF---KNEMMLIAKLQH 580
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVF----LFDPTKK------------------ 618
V+L Q ++ L Y L L +K
Sbjct: 90 PFFVKLYFTF--QDDEKL---YFG---LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 141
Query: 619 -----HLLGWQLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
H G II + I ++ M+ +I+DFG A++ + Q VGT
Sbjct: 142 ALEYLHGKG------IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 195
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
Y+SPE E SD+++ G ++ ++++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 4e-09
Identities = 41/232 (17%), Positives = 86/232 (37%), Gaps = 54/232 (23%)
Query: 506 KSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK-------RL 557
+S L +A+ + + + +G G V + G E AVK RL
Sbjct: 75 QSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERL 134
Query: 558 SNQSGQGLKE-FKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD- 614
S + + ++E + E ++ ++ H +++ L+ L+++ M L FD
Sbjct: 135 SPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL----FDY 190
Query: 615 -PTKKHL-------LGWQLRVRIIDGIAQ------------------DQHMNPKISDFGM 648
K L + +++ ++ D +M ++SDFG
Sbjct: 191 LTEKVALSEKETRSIMRS----LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF 246
Query: 649 ARMFGGDELQGNTKRIVGTYGYMSPE------YALEGVFSVKSDVFSFGVLM 694
+ E + + GT GY++PE + + D+++ GV++
Sbjct: 247 SCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 4e-09
Identities = 47/224 (20%), Positives = 81/224 (36%), Gaps = 66/224 (29%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS-----------------NQSGQGLKE 567
++++ ++G+G +G V + A+K LS
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 568 FKNEMML------IA---KLQHRNLVRLLGCCIEQGEKILIY---EYMVNKSLDVFLFD- 614
+ + IA KL H N+V+L+ ++ + +Y E + + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLV-EVLDDPNEDHLYMVFELVNQGPV----MEV 128
Query: 615 PTKKHLLGWQLRV---RIIDGIA------------------QDQHMNPKISDFGMARMF- 652
PT K L Q R +I GI + + KI+DFG++ F
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSV----KSDVFSFGV 692
G D L VGT +M+PE +L + DV++ GV
Sbjct: 189 GSDAL---LSNTVGTPAFMAPE-SLSETRKIFSGKALDVWAMGV 228
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 5e-09
Identities = 50/246 (20%), Positives = 87/246 (35%), Gaps = 62/246 (25%)
Query: 501 GDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSN 559
G G S +++ + + F ++ G+G FG V G+ G VA+K++
Sbjct: 1 GPGSMMSLNAAAA--ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ 58
Query: 560 QSGQGLKEFKN----EMMLIAKLQHRNLVRLLGCCIEQGEK-------ILIYEYM----- 603
F+N M +A L H N+V+L GE+ ++ EY+
Sbjct: 59 D-----PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLH 113
Query: 604 -VNKSLDVFLFDPTKKH--LLGWQLRVRIIDGIAQDQH-------------MNP-----K 642
++ P + +QL +R I + +N K
Sbjct: 114 RCCRNYYRRQVAPPPILIKVFLFQL-IRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLK 172
Query: 643 ISDFGMARMFGGDELQGNTKRIVGTYGYMSPE-------YALEGVFSVKSDVFSFGVLML 695
+ DFG A+ E N I Y Y +PE Y + D++S G +
Sbjct: 173 LCDFGSAKKLSPSEP--NVAYICSRY-YRAPELIFGNQHY------TTAVDIWSVGCIFA 223
Query: 696 EILSSK 701
E++ +
Sbjct: 224 EMMLGE 229
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 8e-09
Identities = 24/126 (19%), Positives = 42/126 (33%), Gaps = 23/126 (18%)
Query: 39 LAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSP 98
L + L + L + F+L Y G W N+
Sbjct: 1 LGTNYLLSGQTLDTEGHLKN--GDFDLVMQDDCNLV-LYNGNWQS------------NTA 45
Query: 99 IVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTE 158
++ LT+++ G LV+ N T+W S N A + +G LV+ S
Sbjct: 46 NNGRDCKLTLTDYGELVIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFGPS------ 99
Query: 159 SYLWQS 164
+++
Sbjct: 100 --VFKI 103
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 8e-09
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 59/202 (29%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
LG G FG V G+ L G +VAVK L+ Q S + + + E+ + +H ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 589 CCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLG-----------WQLRVRIIDGIA-- 634
I I ++ EY+ LFD K+ G Q I+ G+
Sbjct: 84 -VISTPSDIFMVMEYVSGGE----LFDYICKN--GRLDEKESRRLFQQ----ILSGVDYC 132
Query: 635 ----------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
D HMN KI+DFG++ M E + G+ Y +PE
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPE---- 185
Query: 679 GVFS------VKSDVFSFGVLM 694
V S + D++S GV++
Sbjct: 186 -VISGRLYAGPEVDIWSSGVIL 206
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 1e-08
Identities = 17/125 (13%), Positives = 44/125 (35%), Gaps = 18/125 (14%)
Query: 40 AADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPI 99
+ L + ++ D L + + + L + + +VW + +
Sbjct: 5 VRNVLFSSQVMYDNAQLAT--RDYSLVMRDDCNL------VLTKGSKTNIVWESGTSGR- 55
Query: 100 VDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTES 159
++ + + + G L + + T++ SN + + V L NG V+ +
Sbjct: 56 -GQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYGPA------- 107
Query: 160 YLWQS 164
+W +
Sbjct: 108 -VWST 111
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 39/225 (17%), Positives = 72/225 (32%), Gaps = 86/225 (38%)
Query: 524 TENFSIQSK-LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-H 580
T+++ + + LG G G V + GQ+ A+K L + + + E+ +
Sbjct: 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGG 81
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVF----------LFDPTKKHLLGWQLRVRII 630
++V +L +YE M + + LF RI
Sbjct: 82 PHIVCILD----------VYENMHHGKRCLLIIMECMEGGELFS-------------RIQ 118
Query: 631 D----------------------------GIA-------------QDQHMNPKISDFGMA 649
+ IA +++ K++DFG A
Sbjct: 119 ERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178
Query: 650 RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
+ + LQ T Y++PE + D++S GV+M
Sbjct: 179 KETTQNALQT----PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 1e-08
Identities = 58/254 (22%), Positives = 94/254 (37%), Gaps = 64/254 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLS-------NQSGQGLKEFKNEMMLIA 576
+FS+ +G GGFG VY R + ++ A+K L L E + + L++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVS 247
Query: 577 KLQHRNLVRLLGCCIEQGEKI-LIYEYMVNKSL-------DVFLFDPTK----------K 618
+V + +K+ I + M L VF + +
Sbjct: 248 TGDCPFIVCM-SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 619 HLLGWQLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
H+ ++ I D+H + +ISD G+A F + VGT+GYM+
Sbjct: 307 HMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMA 358
Query: 673 PEYALEGV---FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA-WSLCKNDRAH 728
PE +GV S D FS G ++ ++L GH+ + K H
Sbjct: 359 PEVLQKGVAYDSSA--DWFSLGCMLFKLLR----------------GHSPFRQHKTKDKH 400
Query: 729 ELMDPVLQNEVSLP 742
E+ L V LP
Sbjct: 401 EIDRMTLTMAVELP 414
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 52/202 (25%), Positives = 79/202 (39%), Gaps = 59/202 (29%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
LG G FG V G L G +VAVK L+ Q S + + K E+ + +H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 589 CCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLG-----------WQLRVRIIDGIA-- 634
I ++ EY+ LFD KH G Q I+ +
Sbjct: 79 -VISTPTDFFMVMEYVSGGE----LFDYICKH--GRVEEMEARRLFQQ----ILSAVDYC 127
Query: 635 ----------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
D HMN KI+DFG++ M E + G+ Y +PE
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPE---- 180
Query: 679 GVFS------VKSDVFSFGVLM 694
V S + D++S GV++
Sbjct: 181 -VISGRLYAGPEVDIWSCGVIL 201
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 43/210 (20%), Positives = 74/210 (35%), Gaps = 76/210 (36%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQ--SGQGLKE-FKNEMMLIAKLQHRNLVRLLG 588
LGEG FG V Q+VA+K +S Q + + E+ + L+H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL-- 74
Query: 589 CCIEQGEKILIYEYMVNKSLDVF---------LFDPTKKHLLG-----------WQLRVR 628
Y+ + + D+ LFD + Q
Sbjct: 75 -----------YDVITTPT-DIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQ---- 116
Query: 629 IIDGIA------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
II I D ++N KI+DFG++ + K G+ Y
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LKTSCGSPNY 173
Query: 671 MSPEYALEGVFS------VKSDVFSFGVLM 694
+PE V + + DV+S G+++
Sbjct: 174 AAPE-----VINGKLYAGPEVDVWSCGIVL 198
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 3e-08
Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 13/112 (11%)
Query: 37 FSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRN 96
+ L ++ L + +L + Y W +N +
Sbjct: 2 IPFTNNLLFSGQVLYGDGRLTAK--NHQLVMQGDCNL------VLY---GGKYGWQSNTH 50
Query: 97 SPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVI 148
++ L ++++G L++ + TIWSS S + V L D+G VI
Sbjct: 51 G--NGEHCFLRLNHKGELIIKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVI 100
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 5e-07
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
Query: 94 NRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSG 153
+ + KN L + NLVL W SN ++ +L G L+I+D+
Sbjct: 16 YGDGRLTAKNHQLVMQGDCNLVL--YGGKYGWQSNTHGNGEHCFLRLNHKGELIIKDDDF 73
Query: 154 SNSTESYLWQS 164
+W S
Sbjct: 74 KT-----IWSS 79
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 63/212 (29%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
T+ + ++ +G G + + E AVK + +E +L+ QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE---IEILLRYGQHPN 77
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------- 631
++ L + ++ E M L D +I+
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGEL----LD-------------KILRQKFFSEREASA 120
Query: 632 ---------------GIA-----------QDQHMNP---KISDFGMARMFGGDELQGNTK 662
G+ D+ NP +I DFG A+ + G
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE--NGLLM 178
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
T +++PE + D++S GVL+
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 6e-08
Identities = 41/204 (20%), Positives = 67/204 (32%), Gaps = 63/204 (30%)
Query: 532 KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGC 589
LGEG F K + Q AVK +S + + E+ + + H N+V+L
Sbjct: 18 PLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEV 74
Query: 590 CIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID------------------ 631
+Q L+ E + L F+ RI
Sbjct: 75 FHDQLHTFLVMELLNGGEL----FE-------------RIKKKKHFSETEASYIMRKLVS 117
Query: 632 --------GIA-------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
G+ ++ ++ KI DFG AR+ D K T Y
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPCFTLHY 175
Query: 671 MSPEYALEGVFSVKSDVFSFGVLM 694
+PE + + D++S GV++
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVIL 199
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 21/189 (11%), Positives = 54/189 (28%), Gaps = 46/189 (24%)
Query: 529 IQSKLGEGGFGPVYKGR--LLNGQEVAVKRLSNQSG---QGLKEFKNEMMLIAKLQHRNL 583
+ G ++ L ++VA+ + Q L+E + + ++++ +
Sbjct: 35 LLIFHGGVPPLQFWQALDTAL-DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGV 93
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQD------- 636
R+L + +++ E++ SL +R + +A
Sbjct: 94 ARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA 148
Query: 637 --QH--MNPK---ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
+P +S G + M + + D+
Sbjct: 149 GVALSIDHPSRVRVSIDGDVV--------------LAYPATMPDA-------NPQDDIRG 187
Query: 690 FGVLMLEIL 698
G + +L
Sbjct: 188 IGASLYALL 196
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 7e-08
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 39/206 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQ---SGQGLKEFKNEMMLIAKLQH 580
+ F LG GGFG V+ ++ ++ A K+L+ + +G + E ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 581 RNLVRLLGCCIEQGEKI-LIYEYM-----------VNKSLDVFLFDPTK----------K 618
R +V L E + L+ M V++ F +
Sbjct: 245 RFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 619 HLLGWQLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
HL + II + + D N +ISD G+A + TK GT G+M+
Sbjct: 304 HLH----QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMA 357
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEIL 698
PE L + D F+ GV + E++
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMI 383
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 38/204 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQ---SGQGLKEFKNEMMLIAKLQH 580
F LG+GGFG V ++ ++ A K+L + +G NE ++ K+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 581 RNLVRLLGCCIEQGEKI-LIYEYM---------VNKSLDVFLFDPTK----------KHL 620
R +V L E + + L+ M + F + L
Sbjct: 244 RFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 621 LGWQLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
R RI+ + I D H + +ISD G+A + K VGT GYM+PE
Sbjct: 303 H----RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPE 355
Query: 675 YALEGVFSVKSDVFSFGVLMLEIL 698
++ D ++ G L+ E++
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMI 379
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 48/304 (15%), Positives = 86/304 (28%), Gaps = 120/304 (39%)
Query: 532 KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGC 589
LG G G V + ++ A+K L + + + E+ L + ++VR++
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVD- 122
Query: 590 CIEQGEKILIYEYMVNKSLDVF----------LFDPTKKHLLGWQLRVRIID-------- 631
+YE + + LF RI D
Sbjct: 123 ---------VYENLYAGRKCLLIVMECLDGGELFS-------------RIQDRGDQAFTE 160
Query: 632 --------------------GIA-------------QDQHMNPKISDFGMARMFGGDELQ 658
IA + + K++DFG A+
Sbjct: 161 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-- 218
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA 718
+ T Y++PE + D++S GV+M IL L G+
Sbjct: 219 -SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY-IL---------------LCGYP 261
Query: 719 --WSLCKNDRAHELMDPVLQNEVSLP------------MLVRYINVALLCVQENAEDRPT 764
+S + + + + P ML+R LL R T
Sbjct: 262 PFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR----NLLKT--EPTQRMT 315
Query: 765 MSDV 768
+++
Sbjct: 316 ITEF 319
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK-----RLSNQSGQGLKE-FKNEMMLIA 576
+ + +LG G F V K R G + A K R + +E + E+ ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYM 603
++QH N++ L + + ILI E +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELV 96
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694
KI DFG+A K I GT +++PE +++D++S GV+
Sbjct: 158 KIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 41/209 (19%), Positives = 66/209 (31%), Gaps = 79/209 (37%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVRLLGCC 590
+G G FG R L + VAVK + G + E + E++ L+H N+VR
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREIINHRSLRHPNIVRF---- 81
Query: 591 IEQGEKILIYEYMVNKSLDVF----------LFDPTKKHLLG-----------WQLRVRI 629
E ++ + + L++ G Q +
Sbjct: 82 ---------KEVILTPT-HLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQ----L 125
Query: 630 IDGIA--------------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG 669
+ G++ KI DFG ++ K VGT
Sbjct: 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPA 182
Query: 670 YMSPEYALEGVFS------VKSDVFSFGV 692
Y++PE V +DV+S GV
Sbjct: 183 YIAPE-----VLLRQEYDGKIADVWSCGV 206
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 504 KDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK-----RL 557
S F S+ + + ++ +G+G +G V A+K ++
Sbjct: 5 HHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKI 64
Query: 558 SNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI-LIYEYM 603
+ + ++ K E+ L+ KL H N+ RL E + I L+ E
Sbjct: 65 RQINPKDVERIKTEVRLMKKLHHPNIARLYE-VYEDEQYICLVMELC 110
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 634 AQDQHMNPKISDFGMARMFGGDELQGNT--KRIVGTYGYMSPEYALEGV---FSVKSDVF 688
+ ++ K+ DFG+++ F GT +++PE L + K D +
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE-VLNTTNESYGPKCDAW 260
Query: 689 SFGVLMLEILS 699
S GVL+ +L
Sbjct: 261 SAGVLLHLLLM 271
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 38/206 (18%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HR 581
+++ + KLG G + V++ + N ++V VK L K+ K E+ ++ L+
Sbjct: 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGP 91
Query: 582 NLVRLLGCCIEQGEK--ILIYEYMVNKSLDVF---LFDPTKKHLLGWQL----------R 626
N++ L + + L++E++ N L D + + +++
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM-YEILKALDYCHSMG 150
Query: 627 V--R-------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ R +ID +H ++ D+G+A Q R+ Y + PE +
Sbjct: 151 IMHRDVKPHNVMIDH----EHRKLRLIDWGLAE--FYHPGQEYNVRVASRY-FKGPELLV 203
Query: 678 EGVFSVKS-DVFSFGVLMLEILSSKK 702
+ S D++S G ++ ++ K+
Sbjct: 204 DYQMYDYSLDMWSLGCMLASMIFRKE 229
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHR 581
++ +S+ LG G FG V + + +G+ A+K++ +KN E+ ++ L H
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD-----PRYKNRELDIMKVLDHV 60
Query: 582 NLVRLLGCCIEQGEK 596
N+++L+ G++
Sbjct: 61 NIIKLVDYFYTTGDE 75
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
Score = 48.8 bits (115), Expect = 2e-06
Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 8/78 (10%)
Query: 87 DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
D V + N+ + G + +L N +W+S SR V L + NL
Sbjct: 166 DRDDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNL 225
Query: 147 VIRDNSGSNSTESYLWQS 164
I + LW +
Sbjct: 226 AIYGGA--------LWTT 235
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 5e-04
Identities = 24/146 (16%), Positives = 43/146 (29%), Gaps = 11/146 (7%)
Query: 87 DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
D VW +N + + + G LV+L N WSS + N V L + +
Sbjct: 44 DVRVWASNTAGATGCR---AVLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTV 100
Query: 147 VIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTH 206
I LW S +++ L + S +
Sbjct: 101 TIYG--------PGLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTLHATQSLQLSPY 152
Query: 207 RLDIHVLPQVCVYNGSAKYTCTGPWN 232
RL + + +++ + T
Sbjct: 153 RLSMETDCNLVLFDRDDRVWSTNTAG 178
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 49.5 bits (117), Expect = 3e-06
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 20/112 (17%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRL--------SNQSGQGLKEFKNEMML 574
TE K+GEG FG V++ + VA+K + + + +E E+++
Sbjct: 18 PTEKLQRCEKIGEGVFGEVFQTI-ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 575 IAKLQ---------HRNLVRLLGCCIEQGE--KILIYEYMVNKSLDVFLFDP 615
+L + L QG +L+ + S D
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDR 128
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 4e-06
Identities = 45/219 (20%), Positives = 79/219 (36%), Gaps = 49/219 (22%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKE--FKN---------EM 572
+++Q + G +G V G G VA+KR+ N G + E+
Sbjct: 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKI-----LIYEYM------VNKSLDVFLFDPTKKHLL 621
L+ H N++ L + E L+ E M V + + ++ +
Sbjct: 81 RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM 140
Query: 622 GWQLRVRIIDGI-----AQDQH--MNP-----------KISDFGMARMFGGDELQGNTKR 663
+ I+ G+ A H ++P I DF +AR D N
Sbjct: 141 -YH----ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA---NKTH 192
Query: 664 IVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSK 701
V Y +PE ++ F+ D++S G +M E+ + K
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 4e-06
Identities = 36/190 (18%), Positives = 75/190 (39%), Gaps = 44/190 (23%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN---------EMM 573
+ + I+ +G G +G V + L + VA+K++ F++ E+
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR-------VFEDLIDCKRILREIA 104
Query: 574 LIAKLQHRNLVRLLGCCI----EQGEKI-LIYEYM------VNKSLDVFLFDPTKKHLLG 622
++ +L H ++V++L I E+ +++ ++ E + ++ V+L + K LL
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT-PVYLTELHIKTLL- 162
Query: 623 WQ-LR-------VRII--D----GIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668
+ L I+ D +Q + K+ DFG+AR E + I
Sbjct: 163 YNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRE 222
Query: 669 GYMSPEYALE 678
M+
Sbjct: 223 DDMNLVTFPH 232
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 44/211 (20%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN---------EMM 573
+ + +G G G V + + VA+K+LS F+N E++
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-------FQNQTHAKRAYRELV 76
Query: 574 LIAKLQHRNLVRLL-----GCCIEQGEKI-LIYEYM---VNKSLDVFLFDPTKKHLLGWQ 624
L+ + H+N++ LL +E+ + + ++ E M + + + + L +LL +Q
Sbjct: 77 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQ 135
Query: 625 -LR-------VRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
L II I KI DFG+AR G + V T Y
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYY 192
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
+PE L + D++S G +M E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
Score = 47.4 bits (111), Expect = 9e-06
Identities = 28/147 (19%), Positives = 49/147 (33%), Gaps = 19/147 (12%)
Query: 38 SLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNS 97
+ L + G+ L+SP+QRF+L G + VWVAN
Sbjct: 11 GVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDGNL------VIQD--NGATVWVANEQQ 62
Query: 98 PIV------DKNGVLTVSNRGNLVLLNQSNGTIWSS-----NVSREVKNPVAQLLDNGNL 146
P +K L + L + S +W + + + L D+GN+
Sbjct: 63 PFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNI 122
Query: 147 VIRDNSGSNSTESYLWQSFDYPTDTML 173
V+ D+ + + +L
Sbjct: 123 VLVDSLALWNGTPAIPLVPGAIDSLLL 149
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 42/210 (20%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN---------EMM 573
+ + +G G G V + + VA+K+LS F+N E++
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-------FQNQTHAKRAYRELV 113
Query: 574 LIAKLQHRNLVRLL-----GCCIEQGEKI-LIYEYM---VNKSLDVFLFDPTKKHLLGWQ 624
L+ + H+N++ LL +E+ + + L+ E M + + + + L +LL
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 625 LRVR-------II------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
L II I KI DFG+AR G + V T Y
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYR 230
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
+PE L + D++S G +M E++ K
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 41/218 (18%), Positives = 78/218 (35%), Gaps = 45/218 (20%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
+ LG GG G V+ + VA+K++ Q +K E+ +I +L H N
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMN-- 640
+V++ G ++ + + V++ + + L + G ++H
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIV----QEYMETDLANVLEQGPLLEEHARLF 125
Query: 641 ----------------------P------------KISDFGMARMFGGDELQGN--TKRI 664
P KI DFG+AR+ ++ +
Sbjct: 126 MYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 665 VGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSK 701
V T Y SP L ++ D+++ G + E+L+ K
Sbjct: 186 V-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 40/218 (18%), Positives = 73/218 (33%), Gaps = 57/218 (26%)
Query: 529 IQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSG---QGLKEFK-------NEMMLIAK 577
+ KLG G F V+ + ++N VA+K + E K +
Sbjct: 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 578 LQHRNLVRLLGCCIEQGEKI----LIYEYMVNKSLDVFLFDPTKK-----------HLLG 622
+ ++++LL +G +++E L L KK +
Sbjct: 83 MGANHILKLLDHFNHKGPNGVHVVMVFE-----VLGENLLALIKKYEHRGIPLIYVKQIS 137
Query: 623 WQL---------RVRII------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661
QL R II + + + KI+D G A + +
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-CWYDEHY---- 192
Query: 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+ T Y SPE L + +D++S L+ E+++
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 4e-05
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 99 IVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTE 158
+ ++ + NLVL N + SN + +L + G L I + +
Sbjct: 17 LSYESAAFVMQGDCNLVLYN--EAGGFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVW 74
Query: 159 SY 160
Y
Sbjct: 75 VY 76
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 33/205 (16%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQH 580
+ + + +G G +G V +G++VA+K+LS QS K E++L+ +QH
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH 82
Query: 581 RNLVRLL-----GCCIEQGEKI-LIYEYM---VNKSLDVFLFDPTKKHLLGWQ-LR---- 626
N++ LL + L+ +M + K + + + ++L+ +Q L+
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV-YQMLKGLKY 141
Query: 627 ---VRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
++ +A ++ KI DFG+AR E+ G V T Y +PE L
Sbjct: 142 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEMTGY----VVTRWYRAPEVIL 196
Query: 678 E-GVFSVKSDVFSFGVLMLEILSSK 701
++ D++S G +M E+L+ K
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGK 221
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 6e-05
Identities = 63/447 (14%), Positives = 115/447 (25%), Gaps = 139/447 (31%)
Query: 245 FIFQPIVVQNKDEVYYMYESYSSPIIM------ILRV-NPLGQVQRLIW---HEMSTGWQ 294
+F+ V N D + + I+ I+ + + RL W + Q
Sbjct: 23 SVFEDAFVDNFD-CKDV-QDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80
Query: 295 VFFTAPDPFCHYGDCGPNSICSVDQTSHCECLEGF---KFKSQQNQTC------VRSHSS 345
F V + ++ F K++Q Q +
Sbjct: 81 KFVE-----------------EVLRINY-----KFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 346 DCKSGDRFKKLDDIKLPDLLDVSLNES-MNLKE-----------CEAECLKNCSCRAYAN 393
F K ++ L ++ + L+ + C +Y
Sbjct: 119 LYNDNQVFAKY-NVSRLQPYL-KLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY-- 174
Query: 394 SKVTDGGSGCLMW--FG-------DLIDLKK-----TDNHTNGVSIYIRVPAS-EQGNKK 438
KV + W L L+K N T+ + +
Sbjct: 175 -KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 439 LLWIIVILVLP--LVILPCVYIARQWSRKRKENETKNLDTNQDLLAFDVN--MGITTRTN 494
L ++ L++L V A+ W+ AF+++ + +TTR
Sbjct: 234 LRRLLKSKPYENCLLVLLNVQNAKAWN------------------AFNLSCKILLTTR-- 273
Query: 495 EFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVY-KGRLLNGQEVA 553
K + F S T I P K LL +
Sbjct: 274 ----------FKQ------VTDFLSAATTTH---ISLDHHSMTLTPDEVKSLLLKYLDCR 314
Query: 554 VKRLSNQSGQGL--------KEFKNEMMLIAKLQHRN---LVRLLGCCIEQGEKILIYEY 602
+ L + + ++ + +H N L ++ + E +
Sbjct: 315 PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374
Query: 603 MVNKSLDVFLFD---PTKKHLLG--WQ 624
L VF PT LL W
Sbjct: 375 F--DRLSVFPPSAHIPTI--LLSLIWF 397
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 47/210 (22%), Positives = 78/210 (37%), Gaps = 44/210 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGLKE---FKNEMMLIAKLQH 580
E+F I +G G FG V +L N +V A+K L+ E F+ E ++
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 581 RNLVRLLGCCIEQGEKI-LIYEYMV--------NKSLDVFLFDPTK------------KH 619
+ + L + + L+ +Y V +K D + + H
Sbjct: 134 KWITTLH-YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 620 LLGWQLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
L + D I D + + +++DFG D + VGT Y+SP
Sbjct: 193 QLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAVGTPDYISP 245
Query: 674 E-----YALEGVFSVKSDVFSFGVLMLEIL 698
E +G + + D +S GV M E+L
Sbjct: 246 EILQAMEGGKGRYGPECDWWSLGVCMYEML 275
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 53/197 (26%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQ------EVAVKRLSNQSGQGLKEFKNEMML----- 574
+ + +G+GGFG +Y + + + VK + +G E K
Sbjct: 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95
Query: 575 IAKLQHRNLVRLLG-----CCIEQGEKILIYEYMV----NKSL-DVFLFDP---TKKHLL 621
I K ++ LG + Y +M+ L ++ + ++K +L
Sbjct: 96 IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVL 155
Query: 622 GWQLRVRIIDGIAQDQH---------------MNPK------ISDFGMARMFGGDEL--- 657
QL +RI+D + + H +N K + D+G+A + + +
Sbjct: 156 --QLSLRILDIL-EYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKA 212
Query: 658 --QGNTKRIVGTYGYMS 672
+ GT + S
Sbjct: 213 YAADPKRCHDGTIEFTS 229
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 41/183 (22%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHR 581
++ + ++GEG FG +++G LLN Q+VA+K +S Q E++ +L
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC---T 66
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL-------LGWQLRVRIID--- 631
+ + E +L+ + + SL+ L D + Q+ R+
Sbjct: 67 GIPNVYYFGQEGLHNVLVIDLL-GPSLE-DLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 124
Query: 632 ---------------GIAQDQHMNP-KISDFGMARMFGGDELQGN------TKRIVGTYG 669
G ++ N + DFGM + + D + K + GT
Sbjct: 125 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY-RDPVTKQHIPYREKKNLSGTAR 183
Query: 670 YMS 672
YMS
Sbjct: 184 YMS 186
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 7e-04
Identities = 51/251 (20%), Positives = 90/251 (35%), Gaps = 56/251 (22%)
Query: 486 NMGITTRTNEFCEADGDGKDKSKDSSLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGR 545
N + +E +D + + TA + F LG G FG V +
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 546 L-LNGQEVAVKRLSNQSGQGLKEF---KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601
+G A+K L Q LK+ NE ++ + LV+L + L
Sbjct: 62 HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF--KDNSNL--- 116
Query: 602 YMVNKSLDVF----LF----------DPTKK-------------HLLGWQLRVRII---- 630
YMV ++ +F +P + H L +I
Sbjct: 117 YMV---MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD------LIYRDL 167
Query: 631 --DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVF 688
+ + DQ +++DFG A+ ++G T + GT ++PE L ++ D +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWW 222
Query: 689 SFGVLMLEILS 699
+ GVL+ E+ +
Sbjct: 223 ALGVLIYEMAA 233
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 60/221 (27%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN---------EMM 573
++ S +GEG +G V LN VA+K++S F++ E+
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--------FEHQTYCQRTLREIK 77
Query: 574 LIAKLQHRNLVRLLGC----CIEQGEKI-LIYEYM------VNKSLDVFLFDPTKKHLLG 622
++ + +H N++ + IEQ + + ++ + M + K+ L + + L
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFL- 134
Query: 623 WQLRVRIIDGI-----AQDQH--MNP-----------KISDFGMARMFGGDELQGNTKRI 664
+Q I+ G+ A H + P KI DFG+AR+ D +T +
Sbjct: 135 YQ----ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 188
Query: 665 ---VGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSK 701
V T Y +PE L ++ D++S G ++ E+LS++
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 823 | |||
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.98 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.98 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.98 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.98 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.98 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.98 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.98 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.98 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.97 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.97 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.97 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.97 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.97 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.97 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.97 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.97 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.97 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.97 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.97 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.97 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.97 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.97 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.97 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.97 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.97 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.97 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.97 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.97 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.97 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.97 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.97 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.97 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.97 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.97 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.97 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.97 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.97 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.97 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.97 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.97 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.97 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.97 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.97 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.97 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.97 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.97 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.97 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.97 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.97 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.97 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.97 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.97 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.97 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.97 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.97 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.96 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.96 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.96 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.96 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.96 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.96 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.96 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.96 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.96 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.96 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.96 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.96 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.96 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.96 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.96 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.96 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.96 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.96 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.96 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.96 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.96 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.96 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.96 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.96 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.96 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.96 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.96 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.96 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.96 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.96 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.96 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.96 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.96 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.96 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.96 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.96 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.96 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.96 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.96 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.96 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.96 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.96 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.96 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.96 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.96 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.96 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.96 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.96 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.96 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.96 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.96 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.96 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.96 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.96 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.96 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.96 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.96 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.96 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.96 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.96 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.96 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.96 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.96 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.96 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.96 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.96 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.96 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.96 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.96 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.96 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.96 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.96 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.96 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.96 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.96 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.96 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.96 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.96 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.96 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.96 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.96 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.96 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.96 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.95 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.95 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.95 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.95 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.95 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.95 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.95 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.95 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.95 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.95 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.95 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.95 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.95 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.95 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.95 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.95 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.95 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.95 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.95 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.95 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.95 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.95 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.95 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.95 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.95 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.94 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.94 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.94 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.94 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.94 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.94 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.94 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.94 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.93 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.92 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.92 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.9 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.82 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 99.81 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.8 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.77 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.76 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.76 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.69 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.68 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.64 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.61 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.61 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.58 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.56 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.55 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.52 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.47 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.31 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.25 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.21 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 99.12 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.04 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.0 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 98.99 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 98.9 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 98.75 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 98.67 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.39 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.14 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.83 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 96.5 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 93.07 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 92.85 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 90.38 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 88.62 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 87.17 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 86.76 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 85.73 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 84.94 | |
| 2ll3_A | 82 | Micronemal protein 4; cell adhesion; NMR {Toxoplas | 82.77 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 81.65 |
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=391.93 Aligned_cols=238 Identities=26% Similarity=0.392 Sum_probs=179.2
Q ss_pred hcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
.++|.+.++||+|+||+||+|++. +++.||||+++..+....++|.+|+++|++++|||||+++|+|.+.+..+
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 357888899999999999999864 36789999998877777789999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCc------------ccccCHHHHHHHHh----------------------ccccccCCCcee
Q 003402 598 LIYEYMVNKSLDVFLFDPTK------------KHLLGWQLRVRIID----------------------GIAQDQHMNPKI 643 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~------------~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI 643 (823)
||||||++|+|.++|+.... ...+.|..+..++. ||+.++++.+||
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki 199 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 199 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEE
Confidence 99999999999999965321 12366666655544 344478999999
Q ss_pred ceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhc
Q 003402 644 SDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLC 722 (823)
Q Consensus 644 ~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~ 722 (823)
+|||+|+.+.............||+.|||||++.+..|+.|+|||||||+||||+| |+.||..... ..+...+
T Consensus 200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~i---- 273 (329)
T 4aoj_A 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAIDCI---- 273 (329)
T ss_dssp CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--HHHHHHH----
T ss_pred cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--HHHHHHH----
Confidence 99999998765544444556789999999999999999999999999999999999 8999854321 1111111
Q ss_pred cCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 723 KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 723 ~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..+. ..+.+..+..++.+++..||+.||++||||.||+++|+...
T Consensus 274 ~~g~---------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 274 TQGR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHTC---------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HcCC---------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 1111 01122334567889999999999999999999999998863
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=388.98 Aligned_cols=236 Identities=28% Similarity=0.408 Sum_probs=184.5
Q ss_pred cCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
.++++.++||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 45677899999999999999873 36789999997543 344678999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCc-------------ccccCHHHHHHHHhc----------------------cccccCCCce
Q 003402 598 LIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRIIDG----------------------IAQDQHMNPK 642 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i~~~----------------------ia~d~~~~~K 642 (823)
||||||++|+|.++|..... ...+.|..+..++.+ |+.++++++|
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEE
Confidence 99999999999999964321 234666666555543 4447889999
Q ss_pred eceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhh
Q 003402 643 ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSL 721 (823)
Q Consensus 643 I~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~ 721 (823)
|+|||+|+.+.............||++|||||++.++.|+.|+|||||||+||||+| |+.||..... ..+...+
T Consensus 186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~~i--- 260 (308)
T 4gt4_A 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVEMI--- 260 (308)
T ss_dssp ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHHHH---
T ss_pred ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---
Confidence 999999998765544444556789999999999999999999999999999999999 7888754321 1222111
Q ss_pred ccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 722 ~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+.. .+.+..++..+.+++..||+.||++||||+||+++|+..
T Consensus 261 -~~~~~---------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 261 -RNRQV---------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -HcCCC---------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11111 112334456788999999999999999999999999864
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=388.60 Aligned_cols=238 Identities=25% Similarity=0.391 Sum_probs=186.8
Q ss_pred hcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
.++|.+.++||+|+||+||+|++. +++.||||+++..+.+..++|.+|+++|++++|||||+++|+|.+++..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 367889999999999999999864 36789999998777777789999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCC----------cccccCHHHHHHHHh----------------------ccccccCCCceece
Q 003402 598 LIYEYMVNKSLDVFLFDPT----------KKHLLGWQLRVRIID----------------------GIAQDQHMNPKISD 645 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~----------~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~D 645 (823)
||||||++|+|.++|.... ....+.|..+..++. ||+.++++.+||+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~D 171 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD 171 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECC
Confidence 9999999999999996432 123466666555543 44447899999999
Q ss_pred eeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccC
Q 003402 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
||+|+...............||++|||||++.+..|+.|+|||||||+||||+| |+.||..... ..+.... ..
T Consensus 172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~i----~~ 245 (299)
T 4asz_A 172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIECI----TQ 245 (299)
T ss_dssp CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHH----HH
T ss_pred cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH----Hc
Confidence 999998765544444445679999999999999999999999999999999999 8999854321 1121111 11
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
+.. ...+..++.++.+++..||+.||++||||+||+++|++..
T Consensus 246 ~~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 246 GRV---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC---------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111 1122334567889999999999999999999999998763
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=379.63 Aligned_cols=242 Identities=22% Similarity=0.370 Sum_probs=175.9
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
..+++.+.++||+|+||+||+|++.+ .||||.++.. +.+..++|.+|+.++++++|||||+++|+|.+ +..+|||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 34678889999999999999998754 6999998743 34556789999999999999999999999865 5689999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|||++|+|.++|.... ..+.|..+..++. ||+.++++.+||+|||+|+........
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999996533 2355655554443 444478899999999999987544433
Q ss_pred ccccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 659 GNTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
......+||+.|||||++. .++|+.|+|||||||+||||+||+.||....... .+.. ....+ ...+.+
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~----~~~~~----~~~p~~ 259 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIF----MVGRG----YASPDL 259 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHH----HHHTT----CCCCCS
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHH----HHhcC----CCCCCc
Confidence 4455678999999999986 3569999999999999999999999985432211 1111 11111 111111
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
. ..+..+...+.+++..||+.||++||||.||+++|+.....+
T Consensus 260 ~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 260 S-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp T-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred c-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 1 122334567888999999999999999999999987653333
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=372.55 Aligned_cols=230 Identities=20% Similarity=0.223 Sum_probs=177.4
Q ss_pred cccccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCC-CcEEEeccCCCCCCCC----CceEEEeeCC
Q 003402 38 SLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVANRNSPIVDK----NGVLTVSNRG 112 (823)
Q Consensus 38 ~~~~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~-~tvVWvANr~~Pv~~~----~~~L~l~~~G 112 (823)
+++.|+|++|++|++|++|+||+|.|+||||+++ ++|| |+ + + |||+||||+|+.++ +++|+|+.||
T Consensus 11 ~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G 81 (276)
T 3m7h_A 11 GVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYV 81 (276)
T ss_dssp CTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEEE
T ss_pred cccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCCC
Confidence 4678999999999999999999999999999543 6777 77 5 7 99999999999874 7899999999
Q ss_pred cEEE--EeCCCCeEEEecccCC-----CCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccccccccccccCC
Q 003402 113 NLVL--LNQSNGTIWSSNVSRE-----VKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRTG 185 (823)
Q Consensus 113 ~LvL--~d~~g~~vWst~~~~~-----~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~~~g 185 (823)
+|+| .|++|.+||+|+++.. ..+..|+|+|+|||||+| +.+|||| ||||||||||+++.++.+|
T Consensus 82 ~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~-------~~~lWqS--~ptdtlLpg~~~~~~l~~g 152 (276)
T 3m7h_A 82 QYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD-------SLALWNG--TPAIPLVPGAIDSLLLAPG 152 (276)
T ss_dssp SSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE-------EEEEEES--CTTSCCCCSCTTCEEECSS
T ss_pred cEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC-------CceeeCc--ccccccccccccccccccC
Confidence 9999 8888999999997642 235689999999999997 2689999 9999999999999988887
Q ss_pred CeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcC-CeeeeecCCCCCccccccCCCcceeeEeEEEEeCC-eEEEEEE
Q 003402 186 LERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNG-SAKYTCTGPWNGVAFGSAPSNTTFIFQPIVVQNKD-EVYYMYE 263 (823)
Q Consensus 186 ~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~-~~~yw~sg~w~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~ 263 (823)
.. | ++.+||++|.|++.|+++|. +++|++ +.+||++|+|++......-.. ...+.+.++++ .+.+++.
T Consensus 153 ~~--L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~l~l~~---dGnLvl~d~~~~~vWsS~t 222 (276)
T 3m7h_A 153 SE--L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVRAVFQG---DGNLVVYGAGNAVLWHSHT 222 (276)
T ss_dssp EE--E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCEEEECT---TSCEEEECTTSCEEEECSC
T ss_pred cc--c---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccEEEEEcC---CCeEEEEeCCCcEEEEecC
Confidence 64 5 67899999999999999995 455654 589999999975321111000 11222333333 3333332
Q ss_pred ecCCCcEEEEEEccCCcEEEEEeecCCCCeEEEEEeC
Q 003402 264 SYSSPIIMILRVNPLGQVQRLIWHEMSTGWQVFFTAP 300 (823)
Q Consensus 264 ~~~~~~~~rl~l~~dG~l~~y~~~~~~~~W~~~~~~~ 300 (823)
. ....+|++|+.||++++|.| ...|..+|.+|
T Consensus 223 ~--~~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~P 254 (276)
T 3m7h_A 223 G--GHASAVLRLQANGSIAILDE---KPVWARFGFQP 254 (276)
T ss_dssp T--TCTTCEEEECTTSCEEEEEE---EEEEESSSCCT
T ss_pred C--CCCCEEEEEcCCccEEEEcC---CCeEEccCccC
Confidence 2 22348999999999999998 23455544444
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=373.22 Aligned_cols=246 Identities=24% Similarity=0.359 Sum_probs=187.9
Q ss_pred cHHHHHHHhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCC-CceeeEE
Q 003402 516 SFASVTAATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQH-RNLVRLL 587 (823)
Q Consensus 516 ~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H-~Niv~l~ 587 (823)
...+.+...++|++.++||+|+||+||+|++.. ++.||||++.... ....++|.+|+++|.+++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 334455677899999999999999999998643 3689999997643 3445789999999999965 9999999
Q ss_pred eEEEeC-CeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHHHH----------------------h
Q 003402 588 GCCIEQ-GEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRII----------------------D 631 (823)
Q Consensus 588 g~~~~~-~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i~----------------------~ 631 (823)
|+|.+. +..+||||||++|+|.++|+.... ...+.+..+..++ .
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~ 214 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 214 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcc
Confidence 999775 578999999999999999964221 2235555544433 4
Q ss_pred ccccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCC
Q 003402 632 GIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTD 710 (823)
Q Consensus 632 ~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~ 710 (823)
||+.++++.+||+|||+|+.+..+.........+||+.|||||++.+..|+.|+|||||||+||||+| |+.||......
T Consensus 215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~ 294 (353)
T 4ase_A 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294 (353)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence 45557899999999999998866554445556789999999999999999999999999999999998 89998543322
Q ss_pred ccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 711 SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 711 ~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
. .+... ...+. ....+.....++.+++..||+.||++||||.||+++|+..
T Consensus 295 ~-~~~~~----i~~g~---------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 295 E-EFCRR----LKEGT---------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp H-HHHHH----HHHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred H-HHHHH----HHcCC---------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 1 11111 11111 1112223445788899999999999999999999999775
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-41 Score=360.75 Aligned_cols=245 Identities=21% Similarity=0.259 Sum_probs=173.1
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC----eEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG----EKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~----~~~lV~ 600 (823)
++|.+.++||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|.+++ ..+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3578889999999999999998 689999999975422 1223445666777899999999999998764 689999
Q ss_pred EcccCCCchhhccCCCcc------------------c--------ccCHHHHHHHHhccccccCCCceeceeeceeecCC
Q 003402 601 EYMVNKSLDVFLFDPTKK------------------H--------LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~------------------~--------~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
|||++|+|.++|+..... | ..+..||+.++.||+.+.++++||+|||+|+....
T Consensus 81 Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred cCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 999999999998643211 1 01344555555666668999999999999998754
Q ss_pred Ccc--ccccccccccccccccccccCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch---------hHH
Q 003402 655 DEL--QGNTKRIVGTYGYMSPEYALEG------VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL---------LGH 717 (823)
Q Consensus 655 ~~~--~~~~~~~~Gt~~YmAPE~~~~~------~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l---------~~~ 717 (823)
... .......+||+.|||||++.+. .++.|+|||||||+||||+||++|+.........+ ...
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence 332 2223456899999999999764 47889999999999999999988765332211100 011
Q ss_pred HHhhccCCccccccCccccc-CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 718 AWSLCKNDRAHELMDPVLQN-EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 718 ~~~~~~~~~~~~l~d~~l~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..... ..+.+++.+.. ....+....+.+++.+||+.||++||||.||+++|+..
T Consensus 241 ~~~~~----~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 241 MRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp HHHHH----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH----hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 11111 11112222211 12234667789999999999999999999999999865
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=367.93 Aligned_cols=230 Identities=21% Similarity=0.311 Sum_probs=173.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||+||+|+.. +++.||||+++.. .....+.|.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999875 5899999999754 33456789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc---------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 602 YMVNKSLDVFLFDPTKK---------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~---------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||++|+|.++|...... |..++.||+.++.||+.+.++.+||+|||+|+.+.... ..
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 181 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--EL 181 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--HH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc--cc
Confidence 99999999998532211 22233345555677777899999999999999764321 22
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....+||+.|||||++.+..|+.++|||||||+||||+||+.||.... ...++ ...... ... ..+
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~---~~i~~~-~~~---------~~~ 246 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--MKNLV---LKIISG-SFP---------PVS 246 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHH---HHHHHT-CCC---------CCC
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHH---HHHHcC-CCC---------CCC
Confidence 345789999999999999999999999999999999999999985322 11111 111111 110 112
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.||++|||+.|+++.
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2334568889999999999999999999863
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=364.68 Aligned_cols=232 Identities=20% Similarity=0.269 Sum_probs=181.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+.|++.++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+.+|++++|||||++++++.+.+..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56999999999999999999875 58999999997655555677899999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 604 VNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
++|+|.+++...... |..++.||+.++.||+.+.++.+||+|||+|+.+..+.. ...+.+
T Consensus 154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~ 231 (346)
T 4fih_A 154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLV 231 (346)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--CBCCCC
T ss_pred CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--cccccc
Confidence 999999988643211 223333455556677778999999999999998754422 234579
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
||+.|||||++.+..|+.++|||||||+||||++|+.||.... ....+.... . . ..+.+ ........
T Consensus 232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~---~-~-----~~~~~--~~~~~~s~ 298 (346)
T 4fih_A 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIR---D-N-----LPPRL--KNLHKVSP 298 (346)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHH---H-S-----SCCCC--SCGGGSCH
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHH---c-C-----CCCCC--CccccCCH
Confidence 9999999999999999999999999999999999999985321 111111111 1 0 00111 11123345
Q ss_pred HHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 746 RYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.+++..||+.||++|||+.|+++.
T Consensus 299 ~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 299 SLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 67889999999999999999998774
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=362.61 Aligned_cols=236 Identities=19% Similarity=0.177 Sum_probs=177.5
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.+.|++.++||+|+||+||+|+.. +|+.||||+++.... +.+|+.++++++|||||++++++.+++..+|||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 356888899999999999999875 489999999975422 25799999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCC-CceeceeeceeecCCCcccc---
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHM-NPKISDFGMARMFGGDELQG--- 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~-~~KI~DFGla~~~~~~~~~~--- 659 (823)
|++|+|.++|...... |...+.||+.++.||+.+.++ .+||+|||+|+.+..+....
T Consensus 132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 9999999998642211 223344455556677778887 59999999999876543221
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
....++||+.|||||++.+..|+.++|||||||+||||+||+.||....... +..... .... + ....
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~---~~~~------~--~~~~ 278 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCLKIA---SEPP------P--IREI 278 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHHHHH---HSCC------G--GGGS
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHH---cCCC------C--chhc
Confidence 2234689999999999999999999999999999999999999986433221 111111 1100 0 0112
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccC
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF 777 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 777 (823)
+......+.+++..||+.||++|||+.||++.|...+.
T Consensus 279 ~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 279 PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 23345678889999999999999999999998876543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-41 Score=359.41 Aligned_cols=229 Identities=21% Similarity=0.266 Sum_probs=181.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||+||+|+.. +++.||||.+++. .....+.+.+|++++++++|||||++++++.+.+..+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 67999999999999999999875 5899999999753 2334678999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|||++|+|.++|...... |..++.||+.++.||+.+.++.+||+|||+|+.+..+......
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~ 191 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence 999999999998542211 2233445555667788899999999999999988655444455
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
.+.+||+.|||||++.+..|+.++||||+||+||||++|+.||.... ...+.... ... .. .++.
T Consensus 192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i---~~~-~~----------~~p~ 255 (311)
T 4aw0_A 192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLIFAKI---IKL-EY----------DFPE 255 (311)
T ss_dssp CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH---HHT-CC----------CCCT
T ss_pred cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHH---HcC-CC----------CCCc
Confidence 66899999999999999999999999999999999999999985322 11111111 111 00 1122
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVV 769 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl 769 (823)
....++.+++..||+.||++|||+.|++
T Consensus 256 ~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 256 KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 2345678899999999999999999864
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=351.59 Aligned_cols=227 Identities=23% Similarity=0.327 Sum_probs=169.0
Q ss_pred cceeeeeccccceeEEeeeecC-CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCeEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEKILI 599 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~----~~~~~lV 599 (823)
|++.++||+|+||+||+|+... ++.||||++... .....+.|.+|++++++++|||||++++++.+ .+..+||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 3667899999999999998754 889999999643 33456789999999999999999999999875 3468999
Q ss_pred EEcccCCCchhhccCCCcc-------------------cccC--HHHHHHHHhccccc-cCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKK-------------------HLLG--WQLRVRIIDGIAQD-QHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~-------------------~~l~--~~~r~~i~~~ia~d-~~~~~KI~DFGla~~~~~~~~ 657 (823)
||||++|+|.++|...... |... ..||+.++.||+.+ .++.+||+|||+|+.....
T Consensus 108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-- 185 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-- 185 (290)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT--
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC--
Confidence 9999999999998542211 2222 45566666777776 4789999999999864332
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
...+.+||+.|||||++. +.|+.++|||||||+||||+||+.||...... ..+. .....+.. .+...
T Consensus 186 --~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-~~~~----~~i~~~~~----~~~~~- 252 (290)
T 3fpq_A 186 --FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIY----RRVTSGVK----PASFD- 252 (290)
T ss_dssp --SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHH----HHHTTTCC----CGGGG-
T ss_pred --ccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-HHHH----HHHHcCCC----CCCCC-
Confidence 234578999999999886 46999999999999999999999998532211 1111 11111110 01111
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....++.+++..||+.||++|||+.|+++.
T Consensus 253 ---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 ---KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1123457889999999999999999998763
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-40 Score=365.64 Aligned_cols=233 Identities=20% Similarity=0.271 Sum_probs=181.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.+.|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 356999999999999999999875 4899999999866555567799999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccccc
Q 003402 603 MVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRI 664 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~ 664 (823)
|++|+|.+++...... |..++.||+.+..||+.+.++.+||+|||+|+.+..+.. ...+.
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~ 307 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSL 307 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--CBCCC
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--ccccc
Confidence 9999999988543211 223333445555677778999999999999998754432 23457
Q ss_pred cccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHH
Q 003402 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744 (823)
Q Consensus 665 ~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~ 744 (823)
+||+.|||||++.+..|+.++|||||||+||||++|+.||.... ....+.... .. ..+.+. ......
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~---~~------~~~~~~--~~~~~s 374 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIR---DN------LPPRLK--NLHKVS 374 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHH---HS------CCCCCS--CTTSSC
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHH---cC------CCCCCc--ccccCC
Confidence 99999999999999999999999999999999999999985321 111111111 11 001111 112234
Q ss_pred HHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 745 VRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 745 ~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+.+++..||+.||++|||+.|+++.
T Consensus 375 ~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 375 PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 567889999999999999999998774
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=339.55 Aligned_cols=227 Identities=22% Similarity=0.309 Sum_probs=161.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||+||+|+.. +++.||||.+++.. ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999865 58999999997542 234567999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+ +|+|.+++...... |..++.||+.++.||+.+.++++||+|||+|+...... ..
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~---~~ 168 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FL 168 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC---cc
Confidence 999 68898887543221 22233344455567777899999999999998764332 23
Q ss_pred ccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.+.+||+.|||||++.+..| +.++||||+||+||||+||+.||.... ...+.... ..+.. ..+
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--~~~~~~~i----~~~~~----------~~p 232 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKNI----SNGVY----------TLP 232 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH----HHTCC----------CCC
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--HHHHHHHH----HcCCC----------CCC
Confidence 35789999999999998886 589999999999999999999985321 11111111 11100 111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.||++|||+.|+++.
T Consensus 233 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 2234567889999999999999999999874
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=348.07 Aligned_cols=228 Identities=22% Similarity=0.273 Sum_probs=167.8
Q ss_pred cCcceeeeeccccceeEEeeeec----CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.++||+|+||+||+|+.. .++.||||.+++.. .....++.+|++++++++|||||++++++.+++..+|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999752 36799999997532 2233578899999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|||||++|+|.++|...... |..+..||+.++.||+.+.++.+||+|||+|+...... .
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 181 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--K 181 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-------C
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC--c
Confidence 99999999999998542211 22334455556677888999999999999999754332 2
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
...+.+||+.|||||++.+..|+.++|||||||+||||+||+.||..... ..+... .... . ...
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~---i~~~-~----------~~~ 245 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETMTM---ILKA-K----------LGM 245 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH---HHHC-C----------CCC
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHHHH---HHcC-C----------CCC
Confidence 23457899999999999999999999999999999999999999853221 111111 1111 0 011
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCH-----HHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTM-----SDVVS 770 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~ 770 (823)
+......+.+++..||+.||++|||+ +|+++
T Consensus 246 p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 246 PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 22234567889999999999999995 56654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=328.92 Aligned_cols=230 Identities=21% Similarity=0.277 Sum_probs=159.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--------
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG-------- 594 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~-------- 594 (823)
++|++.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46899999999999999999875 58999999997543 334568999999999999999999999997654
Q ss_pred ----eEEEEEEcccCCCchhhccCCCcccccC----------------------HHHHHHHHhccccccCCCceeceeec
Q 003402 595 ----EKILIYEYMVNKSLDVFLFDPTKKHLLG----------------------WQLRVRIIDGIAQDQHMNPKISDFGM 648 (823)
Q Consensus 595 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~----------------------~~~r~~i~~~ia~d~~~~~KI~DFGl 648 (823)
..+||||||++|+|.+++.......... +.||+.++.||+.+.++.+||+|||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence 3689999999999999997543322222 22333344566668899999999999
Q ss_pred eeecCCCcccc----------ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHH
Q 003402 649 ARMFGGDELQG----------NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA 718 (823)
Q Consensus 649 a~~~~~~~~~~----------~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~ 718 (823)
|+.+..+.... .....+||+.|||||++.+..|+.++|||||||+||||++ |+.. . .......
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~---~-~~~~~~~ 237 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST---Q-MERVRTL 237 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS---H-HHHHHHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC---c-cHHHHHH
Confidence 99875443211 1234689999999999999999999999999999999996 5421 1 1111111
Q ss_pred HhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 719 WSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 719 ~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. ....... +. .........+++.+||+.||++|||+.|+++.
T Consensus 238 ~~-~~~~~~p----~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 238 TD-VRNLKFP----PL-----FTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HH-HHTTCCC----HH-----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HH-HhcCCCC----CC-----CcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01 0111100 00 11223446679999999999999999999873
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=314.50 Aligned_cols=215 Identities=14% Similarity=0.168 Sum_probs=162.6
Q ss_pred ccccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEe
Q 003402 39 LAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLN 118 (823)
Q Consensus 39 ~~~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d 118 (823)
++.|+|++|++|++|++| ++|.|+|||+.+++ +. +|.. +||||+|||+.| .+++|+|+.||+|||.|
T Consensus 6 ~~~~~i~~g~~L~~g~~l--~~g~f~l~f~~~gn-----l~-ly~~--~~~vW~an~~~~---~~~~l~l~~dGnLvl~d 72 (236)
T 1dlp_A 6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDCN-----LV-LFDS--DVRVWASNTAGA---TGCRAVLQSDGLLVILT 72 (236)
T ss_dssp CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTSC-----EE-EEES--SSEEECCCCCSC---SCCBCCBCSSSCBCCBC
T ss_pred eccceeCCCCEECCCCEE--EcCCEEEEECCCCc-----EE-EEEC--CEEEEECCCCCC---CCeEEEEcCCCcEEEEc
Confidence 467999999999999999 59999999997664 23 3433 799999999998 45899999999999999
Q ss_pred CCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccc-cccccccccc-cCCC-----eeEEE
Q 003402 119 QSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTM-LQGMKLGWDL-RTGL-----ERYQT 191 (823)
Q Consensus 119 ~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTl-Lpgq~l~~~~-~~g~-----~~~l~ 191 (823)
++|.+||+|++........|+|+|+|||||++ .++||||||||||+ ||+| +.+. .+|+ ++.|+
T Consensus 73 ~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~--------~~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~ 142 (236)
T 1dlp_A 73 AQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYG--------PGLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLH 142 (236)
T ss_dssp TTTCCSCCCCCCCCSSCCEEEECSSSCEEEEC--------SEEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEEC
T ss_pred CCCcEEEeCCccccCCcEEEEEeCCCCEEEec--------CCEEECCCCCCcccccCCc--cceEEecCCcCCCccceEE
Confidence 99999999998643344689999999999984 27999999999777 5554 3333 3343 45776
Q ss_pred EeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCCCCCccccccCC-CcceeeEeEEEEe-CCeEEEEEEecCCCc
Q 003402 192 SWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPS-NTTFIFQPIVVQN-KDEVYYMYESYSSPI 269 (823)
Q Consensus 192 Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~w~~~~~~~~p~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 269 (823)
+.+||++|.|+|.|+++| +++++++..+||++|+|++. +...++ .... .+...+. .++++++|..... .
T Consensus 143 ---s~~d~s~G~~~l~l~~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~~~G--nl~ly~~~~~~vw~s~~~~~~-~ 213 (236)
T 1dlp_A 143 ---ATQSLQLSPYRLSMETDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQPNG--RMDVLTNQNIAVWTSGNSRSA-G 213 (236)
T ss_dssp ---SSCCCBCSSCEEEEETTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEETTT--EEEEEETTTEEEEECCCCCSS-S
T ss_pred ---cCcEeecCcEEEEECCCC--cEEEEcCCEeEEeCCCcCCC-CceEEEECCCC--cEEEEeCCCcEEEEeCCCCCC-C
Confidence 578999999999999999 67888888899999999653 444444 1111 1111222 3344444443333 4
Q ss_pred EEEEEEccCCcEEEEE
Q 003402 270 IMILRVNPLGQVQRLI 285 (823)
Q Consensus 270 ~~rl~l~~dG~l~~y~ 285 (823)
.+|++||+||++++|.
T Consensus 214 ~~rl~Ld~dG~l~ly~ 229 (236)
T 1dlp_A 214 RYVFVLQPDRNLAIYG 229 (236)
T ss_dssp CCEEEECSSSCEEEEC
T ss_pred CEEEEEcCCCcEEEeC
Confidence 6899999999999984
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=325.88 Aligned_cols=262 Identities=34% Similarity=0.573 Sum_probs=212.4
Q ss_pred ccHHHHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC
Q 003402 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG 594 (823)
Q Consensus 515 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~ 594 (823)
+.+.++...+++|++.+.||+|+||.||+|+..+++.||||++........++|.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33444556778999999999999999999998889999999998766667789999999999999999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCcc-cccCHHHHHHHHh----------------------ccccccCCCceeceeeceee
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKK-HLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~-~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGla~~ 651 (823)
..++||||+++|+|.+++...... ..+.+..+..++. ||..+.++.+||+|||+++.
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 999999999999999999754321 2355555544433 33347788999999999987
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-ccchhHHHHhhccCCccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~l 730 (823)
..............||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... ......+.......+....+
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 65433233334467999999999999999999999999999999999999998644332 34445555445555666777
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
+++.+...........+.+++..||+.||++|||+.||++.|+..+
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 7777777778888999999999999999999999999999998763
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=327.40 Aligned_cols=264 Identities=37% Similarity=0.623 Sum_probs=214.1
Q ss_pred CCCcccHHHHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeE
Q 003402 511 SLPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGC 589 (823)
Q Consensus 511 ~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~ 589 (823)
.+..+++.++....++|++.++||+|+||.||+|+..+++.||||++..... .....|.+|++++.+++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 4567889999999999999999999999999999988899999999975432 223479999999999999999999999
Q ss_pred EEeCCeEEEEEEcccCCCchhhccCCCc-ccccCHHHHHHHH-------------------------hccccccCCCcee
Q 003402 590 CIEQGEKILIYEYMVNKSLDVFLFDPTK-KHLLGWQLRVRII-------------------------DGIAQDQHMNPKI 643 (823)
Q Consensus 590 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-~~~l~~~~r~~i~-------------------------~~ia~d~~~~~KI 643 (823)
+.+.+..++||||+++|+|.+++..... ...+.+..+..++ .||..+.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 9999999999999999999999975432 2224444433332 2334467889999
Q ss_pred ceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC---CCCCccchhHHHHh
Q 003402 644 SDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV---YNTDSFNLLGHAWS 720 (823)
Q Consensus 644 ~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~---~~~~~~~l~~~~~~ 720 (823)
+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.|+.. .......+..+...
T Consensus 176 ~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 176 GDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp CCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred ccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 99999998754332 223345699999999999988999999999999999999999999852 12234455566666
Q ss_pred hccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 721 ~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.........+.+..+...........+.+++..||+.||++|||+.||+++|++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 6666677778888877788888999999999999999999999999999999875
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=343.31 Aligned_cols=232 Identities=22% Similarity=0.255 Sum_probs=176.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
++|++.++||+|+||+||+|+.. +|+.||||.+........+.+.+|+.+|++++|||||++++++.+.+..+||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 67999999999999999999875 58999999998766566678999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccc--cCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQD--QHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d--~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++|+|.++|...... |...+.||+.++.||+.+ ..+.+||+|||+|+.+.... ..
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~---~~ 313 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SV 313 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS---EE
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC---ce
Confidence 999999988643221 111222333334555554 34789999999999875543 23
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...+||+.|||||++.+..|+.++||||+||+||||++|+.||..... ...+.. .... .. . ++.. ...
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~~~~---i~~~-~~-~-~~~~----~~~ 381 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRN---VKSC-DW-N-MDDS----AFS 381 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHH---HHTT-CC-C-CCSG----GGT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHH---HHhC-CC-C-CCcc----ccc
Confidence 456899999999999999999999999999999999999999853321 111111 1110 00 0 0000 111
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++..||+.||++|||+.|++++
T Consensus 382 ~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 382 GISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 234567889999999999999999999874
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=327.54 Aligned_cols=243 Identities=19% Similarity=0.228 Sum_probs=172.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe------CCe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE------QGE 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~------~~~ 595 (823)
++|++.++||+|+||+||+|+.. +|+.||||++++. .....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999875 5899999999754 23345678999999999999999999999864 367
Q ss_pred EEEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
.+||||||+ |+|..++...... |..++.||+.++.||+.+.++.+||+|||+|+.+....
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~ 212 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence 899999996 7798888653221 22333445555667777899999999999999774432
Q ss_pred c--ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 657 L--QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 657 ~--~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
. .....+.+||+.|||||++.+. .++.++||||+||++|||++|+.||..... ...+........... .+....
T Consensus 213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~--~~~l~~I~~~~g~p~-~~~~~~ 289 (398)
T 4b99_A 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY--VHQLQLIMMVLGTPS-PAVIQA 289 (398)
T ss_dssp ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH--HHHHHHHHHHHCCCC-GGGTC-
T ss_pred cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH--HHHHHHHHHhcCCCC-hHHhhh
Confidence 1 2234457999999999998875 469999999999999999999999853321 111111111110000 000000
Q ss_pred -----------cc--ccCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 -----------VL--QNEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 -----------~l--~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+ ....+ ......+.+++..||+.||++|||+.|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 00001 1123567889999999999999999998874
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=322.78 Aligned_cols=184 Identities=21% Similarity=0.287 Sum_probs=145.3
Q ss_pred HhcCcceeeeeccccceeEEeeeec----CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~ 597 (823)
..+.|++.++||+|+||+||+|+.. .++.||||++.... ...++.+|+++|.++ +|||||++++++.+.++.+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 3477999999999999999999753 36789999987543 346788999999998 6999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcc----------------cccCHHHHHHHHhccccccC-CCceeceeeceeecCCCccc--
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK----------------HLLGWQLRVRIIDGIAQDQH-MNPKISDFGMARMFGGDELQ-- 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~----------------~~l~~~~r~~i~~~ia~d~~-~~~KI~DFGla~~~~~~~~~-- 658 (823)
||||||++|+|.+++...... |..++.||+.++.||+.+.+ +.+||+|||+|+........
T Consensus 97 lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~ 176 (361)
T 4f9c_A 97 IAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELL 176 (361)
T ss_dssp EEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGG
T ss_pred EEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccc
Confidence 999999999999988532211 22334455556667777766 78999999999876432211
Q ss_pred ------------------------cccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003402 659 ------------------------GNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYN 708 (823)
Q Consensus 659 ------------------------~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~ 708 (823)
......+||+.|||||++.+.. |+.++||||+||++|||++|+.||....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp GGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 1123457999999999998764 8999999999999999999999985433
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-33 Score=299.48 Aligned_cols=261 Identities=34% Similarity=0.505 Sum_probs=199.7
Q ss_pred CCCcccHHHHHHHhcCccee------eeeccccceeEEeeeecCCcEEEEEEeccC----ChhhHHHHHHHHHHHHhcCC
Q 003402 511 SLPLFSFASVTAATENFSIQ------SKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ----SGQGLKEFKNEMMLIAKLQH 580 (823)
Q Consensus 511 ~~~~~~~~~~~~~~~~f~~~------~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~----~~~~~~~f~~Ev~~l~~l~H 580 (823)
..+.|++.++..++++|... ++||+|+||.||+|+. +++.||||++... .....+.|.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999877 8999999999999987 6789999998643 23345789999999999999
Q ss_pred CceeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccC
Q 003402 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQH 638 (823)
Q Consensus 581 ~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~ 638 (823)
|||+++++++.+.+..++||||+++++|.+++........+.+..+..++. ||..+.+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 169 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC
Confidence 999999999999999999999999999999986543333455655544443 3333678
Q ss_pred CCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHH
Q 003402 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA 718 (823)
Q Consensus 639 ~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~ 718 (823)
+.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.|+....... .+....
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~ 247 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIK 247 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHH
Confidence 8999999999987654333333344679999999998764 58999999999999999999999986543321 111111
Q ss_pred Hhhc-cCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 719 WSLC-KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 719 ~~~~-~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.... ......+.+++.+ ...+......+.+++..||+.||++||++.+|+++|+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1111 1112233333333 234566778899999999999999999999999999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=334.02 Aligned_cols=229 Identities=22% Similarity=0.243 Sum_probs=173.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHH---HHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEF---KNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f---~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
++|++.++||+|+||+||+++.. +|+.||||++++.. ......+ +.|+.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999876 48999999996431 1222233 34567778889999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCc-------------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 598 LIYEYMVNKSLDVFLFDPTK-------------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||||||++|+|..+|..... .|..++.||+.++.||+.+.++.+||+|||+|+.+....
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~-- 346 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 346 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC--
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC--
Confidence 99999999999998854221 133455566667788888999999999999999875433
Q ss_pred cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
..+.+||+.|||||++.. ..|+.++||||+||+||||++|+.||........ .......... ..
T Consensus 347 --~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i~~~-----------~~ 411 (689)
T 3v5w_A 347 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTM-----------AV 411 (689)
T ss_dssp --CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHHHHC-----------CC
T ss_pred --CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhhcCC-----------CC
Confidence 345799999999999975 5799999999999999999999999854322211 1100000000 01
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCC-----HHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPT-----MSDVVS 770 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~ 770 (823)
..+......+.+++..||+.||.+|++ +.||.+
T Consensus 412 ~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 122234456888999999999999998 677765
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-34 Score=307.19 Aligned_cols=237 Identities=21% Similarity=0.343 Sum_probs=180.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
++|.+.++||+|+||.||+|+.. +++.||+|.+........+.|.+|++++.+++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 67889999999999999999875 48899999997766677789999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc--
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG-- 659 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~-- 659 (823)
++|+|.+++.... ..+.+..+..++ .||..+.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 90 KGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 9999999986532 224444443333 34444788899999999998765432211
Q ss_pred ----------ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccc
Q 003402 660 ----------NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729 (823)
Q Consensus 660 ----------~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 729 (823)
......||+.|+|||.+.+..++.++|||||||++|||++|..|+............
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~------------- 234 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL------------- 234 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB-------------
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh-------------
Confidence 111467999999999999999999999999999999999999887543322111000
Q ss_pred ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 730 l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..........+......+.+++..||+.||++||++.++++.|+...
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 235 NVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp CHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00000111112223345778999999999999999999999998764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=303.64 Aligned_cols=239 Identities=23% Similarity=0.377 Sum_probs=172.4
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
..++|++.++||+|+||.||+|+. .++.||||.+.... ....++|.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 346799999999999999999987 67899999997543 344578999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHH------------------------HHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQ------------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~------------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||+++|+|.+++........+.+. |++..+.||..+.++.+||+|||+++......
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 999999999998754322223333 22333344555778899999999998654332
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... ....... .....
T Consensus 194 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~---~~~~~--------- 257 (309)
T 3p86_A 194 --LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVG---FKCKR--------- 257 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHH---HSCCC---------
T ss_pred --cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH---hcCCC---------
Confidence 1233468999999999999999999999999999999999999998543211 1111110 00000
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCC
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 778 (823)
...+......+.+++..||+.||++|||+.+|++.|+.....
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111223345678899999999999999999999999987543
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-33 Score=308.35 Aligned_cols=238 Identities=25% Similarity=0.395 Sum_probs=181.7
Q ss_pred hcCcceeeeeccccceeEEeeeec--------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL--------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ 593 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~--------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~ 593 (823)
.++|++.+.||+|+||.||+|+.. ++..||||.++.. .....+++.+|+.+++++ +|||||++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467999999999999999999753 3457999999764 334567899999999999 899999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHHHH----------------------hccccccC
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRII----------------------DGIAQDQH 638 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i~----------------------~~ia~d~~ 638 (823)
+..++||||+++|+|.+++..... ...+.+.....++ .||+.+.+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 239 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence 999999999999999999864321 1223443333322 34445788
Q ss_pred CCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHH
Q 003402 639 MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGH 717 (823)
Q Consensus 639 ~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~ 717 (823)
+.+||+|||+++.+.............||+.|||||++.+..++.++|||||||++|||++ |+.|+...... .+...
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~~~~~ 317 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFKL 317 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 9999999999998765444344445678899999999999999999999999999999999 88887543221 11111
Q ss_pred HHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 718 AWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 718 ~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
...+. ....+......+.+++..||+.||++||++.|+++.|+..+
T Consensus 318 ----~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 318 ----LKEGH---------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp ----HHTTC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----HhcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 01122234457888999999999999999999999998753
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=304.97 Aligned_cols=242 Identities=21% Similarity=0.292 Sum_probs=177.3
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC----eEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG----EKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~----~~~lV 599 (823)
.++|++.++||+|+||.||+|+.. ++.||||++.... .....+.+|+.++.+++|||||++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 367999999999999999999875 7899999997543 33456677999999999999999999998854 47999
Q ss_pred EEcccCCCchhhccCCCcccccCHHH--------------------------------HHHHHhccccccCCCceeceee
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQL--------------------------------RVRIIDGIAQDQHMNPKISDFG 647 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~--------------------------------r~~i~~~ia~d~~~~~KI~DFG 647 (823)
|||+++|+|.+++.... +.+.. ++..+.||+.+.++.+||+|||
T Consensus 101 ~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp EECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 99999999999985432 33333 2233344445778899999999
Q ss_pred ceeecCCCccccccccccccccccccccccCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccc-hhH-----
Q 003402 648 MARMFGGDELQGNTKRIVGTYGYMSPEYALEG-----VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFN-LLG----- 716 (823)
Q Consensus 648 la~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~-----~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~-l~~----- 716 (823)
+++.+.............||+.|+|||++.+. .++.++|||||||++|||+||+.|+......... +..
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 99987655444444457899999999999863 4677899999999999999999998644332111 100
Q ss_pred ----HHHhhccCCccccccCcccccC-CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 717 ----HAWSLCKNDRAHELMDPVLQNE-VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 717 ----~~~~~~~~~~~~~l~d~~l~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.......... ..+.+... ........+.+++..||+.||++|||+.||++.|+..
T Consensus 257 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 257 PSLEDMQEVVVHKK----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp CCHHHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred Cchhhhhhhhhccc----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0000001111 11111111 1224566799999999999999999999999999864
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-34 Score=318.84 Aligned_cols=236 Identities=22% Similarity=0.305 Sum_probs=178.3
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
..++|.+.++||+|+||.||+|++. +++.||||.++... ....++|.+|++++++++|||||++++++.+.+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 4467999999999999999999986 58999999997543 334467999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++|+|.+++.... ..+.+.....+ +.||+.+.++.+||+|||+++........
T Consensus 192 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred EcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 9999999999986422 12333333322 23444578899999999999976544332
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.......+|+.|+|||.+..+.++.++|||||||++|||++ |+.|+...... .... ....+. ..
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~----~~~~~~---------~~ 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTRE----FVEKGG---------RL 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHH----HHHTTC---------CC
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH----HHHcCC---------CC
Confidence 22233456889999999999999999999999999999999 88887533211 1111 111110 01
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+......+.+++..||+.||++|||+.+|++.|+..
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 11222345678899999999999999999999999764
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.1e-33 Score=301.04 Aligned_cols=240 Identities=21% Similarity=0.298 Sum_probs=183.9
Q ss_pred CcccHHHHHHHhcC----------cceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCC
Q 003402 513 PLFSFASVTAATEN----------FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHR 581 (823)
Q Consensus 513 ~~~~~~~~~~~~~~----------f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~ 581 (823)
+.+++.++..+++. |+..++||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45777888777764 777789999999999999976 6899999999876666678899999999999999
Q ss_pred ceeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCC
Q 003402 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHM 639 (823)
Q Consensus 582 Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~ 639 (823)
||+++++++...+..++||||+++++|.+++... .+.+.....++ .||..+.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence 9999999999999999999999999999998643 23444433333 334447788
Q ss_pred CceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH
Q 003402 640 NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719 (823)
Q Consensus 640 ~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~ 719 (823)
.+||+|||+++.+..... ......||+.|||||++.+..++.++|||||||++|||++|+.|+..... ......
T Consensus 179 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~-- 252 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKR-- 252 (321)
T ss_dssp CEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHH--
T ss_pred cEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH--
Confidence 999999999988754322 22346899999999999999999999999999999999999999853211 111111
Q ss_pred hhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 720 ~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. .... .+.+. ........+.+++..||+.||++|||+.|+++.
T Consensus 253 -~-~~~~-----~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 253 -L-RDSP-----PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp -H-HHSS-----CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -H-hcCC-----CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1110 01110 111234567889999999999999999999875
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-32 Score=295.47 Aligned_cols=229 Identities=20% Similarity=0.321 Sum_probs=175.9
Q ss_pred hcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||+||+|+. .+++.||||.+........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 36799999999999999999986 45899999999765555667899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++|+|.+++.... +..... +..+.||..+.++.+||+|||+++.+..... .
T Consensus 99 ~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 172 (297)
T ss_dssp CTTCBHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--C
T ss_pred CCCCCHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--c
Confidence 99999999986432 222222 2223445557889999999999988754432 2
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....||+.|||||.+.+..++.++|||||||++|||++|+.|+...... .. ......... ..+ ..+
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~---~~~~~~~~~-~~~-------~~~ 239 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RA---LYLIATNGT-PEL-------QNP 239 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HH---HHHHHHHCS-CCC-------SCG
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HH---HHHHHhCCC-CCC-------CCc
Confidence 33468999999999999999999999999999999999999998532211 11 111111110 011 111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2234567889999999999999999999874
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-33 Score=307.07 Aligned_cols=236 Identities=25% Similarity=0.382 Sum_probs=176.5
Q ss_pred hcCcceeeeeccccceeEEeeeec----CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|++.++||+|+||.||+|+.. .+..||||.++.. .....++|.+|+.++.+++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 357899999999999999999874 3456999999764 34456789999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++|+|.+++..... .+.+.....++ .||..+.++.+||+|||+++.+....
T Consensus 128 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred EeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999964322 23333333332 34555788999999999999875432
Q ss_pred cc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 657 LQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 657 ~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.. .......||+.|||||.+.+..++.++|||||||++|||++ |+.|+..... ..+.... ..+
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~----~~~--------- 270 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSV----EEG--------- 270 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHH----HTT---------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH----HcC---------
Confidence 21 12223457889999999998999999999999999999999 9988743221 1111111 111
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.....+......+.+++..||+.||++||++.+|+++|+...
T Consensus 271 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 011122234457888999999999999999999999998874
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-33 Score=312.95 Aligned_cols=235 Identities=25% Similarity=0.402 Sum_probs=166.2
Q ss_pred cCcceeeeeccccceeEEeeeec----CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.+.||+|+||.||+|+.. ++..||||.++.. .....++|.+|+.++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57889999999999999999875 4678999999754 334557899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++|+|.+++..... .+.+..+..++ .||..+.++.+||+|||+++.+.....
T Consensus 125 ~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp EECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 999999999999965321 23444333333 344447889999999999987754322
Q ss_pred c-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 658 Q-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 658 ~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
. .......+|+.|+|||++.+..++.++|||||||++|||++ |+.|+..... ..+.... .. ..
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~i----~~---------~~ 267 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKAV----DE---------GY 267 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHHH----HT---------TE
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----Hc---------CC
Confidence 1 11222356789999999999999999999999999999998 9998753321 1111111 11 11
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
....+......+.+++..||+.||++||+|.+|+++|+...
T Consensus 268 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 11122234567889999999999999999999999998763
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-32 Score=293.70 Aligned_cols=244 Identities=22% Similarity=0.273 Sum_probs=172.8
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHh--cCCCceeeEEeEEEeC----CeEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK--LQHRNLVRLLGCCIEQ----GEKI 597 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~--l~H~Niv~l~g~~~~~----~~~~ 597 (823)
.++|++.++||+|+||.||+|+. +++.||||++... ..+.+..|.+++.. ++||||+++++++.+. ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 36799999999999999999988 6899999999653 34566777777766 7999999999997653 4689
Q ss_pred EEEEcccCCCchhhccCCCcc------------------c--------ccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK------------------H--------LLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~------------------~--------~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
+||||+++|+|.+++...... | ..++.|++..+.||+.+.++.+||+|||+|+.
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 999999999999998543211 1 11122223333455557788999999999987
Q ss_pred cCCCccc--cccccccccccccccccccCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCCCCccc
Q 003402 652 FGGDELQ--GNTKRIVGTYGYMSPEYALEG------VFSVKSDVFSFGVLMLEILSS----------KKNTGVYNTDSFN 713 (823)
Q Consensus 652 ~~~~~~~--~~~~~~~Gt~~YmAPE~~~~~------~~s~ksDVwSfGvvl~Elltg----------~~p~~~~~~~~~~ 713 (823)
....... .......||+.|+|||.+.+. .++.++|||||||++|||++| +.|+.........
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~ 242 (301)
T 3q4u_A 163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS 242 (301)
T ss_dssp EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcc
Confidence 6543321 122345899999999999876 456899999999999999999 6666433222222
Q ss_pred hhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 714 LLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 714 l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
................+. ...........+.+++..||+.||++|||+.+|+++|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 243 FEDMRKVVCVDQQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhhHHHhccCCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 111111111111111110 1112335677899999999999999999999999999763
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-33 Score=305.82 Aligned_cols=234 Identities=23% Similarity=0.370 Sum_probs=169.9
Q ss_pred cCcceeeeeccccceeEEeeeecC-Cc----EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.++||+|+||.||+|++.. ++ .||+|.+... .....++|.+|+.++++++||||++++++|.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 569999999999999999998643 33 4689988643 3345678999999999999999999999998765 788
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+||+++|+|.+++..... .+.+..... .+.||+.+.++.+||+|||+|+.+....
T Consensus 94 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 9999999999999865322 233333222 2334555788899999999999876554
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.........||+.|||||.+.+..++.++|||||||++|||++ |+.|+...... .+.... ..+ .
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~----~~~---------~ 236 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSIL----EKG---------E 236 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH----HTT---------C
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHH----HcC---------C
Confidence 4444445677899999999999999999999999999999999 99988543221 111111 111 0
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
....+......+.+++..||+.||++||+|.+|+++|+...
T Consensus 237 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 237 RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 11112234456888999999999999999999999987653
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.98 E-value=2.2e-33 Score=320.75 Aligned_cols=238 Identities=24% Similarity=0.333 Sum_probs=180.5
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
....++|++.++||+|+||.||+|++.++..||||.++... ...++|.+|+.++++++|||||++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34567899999999999999999999888999999997643 45688999999999999999999999986 66789999
Q ss_pred EcccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|||++|+|.+++..... ..+.+... +..+.||+.+.++.+||+|||+++.+......
T Consensus 262 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp CCCTTCBHHHHHHSHHH-HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred eecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 99999999999964311 11222222 22234555578899999999999876543222
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......+|+.|||||.+....++.++|||||||+||||+| |+.|+..... ..+..... ... ..
T Consensus 341 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~---~~~----------~~ 404 (454)
T 1qcf_A 341 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALE---RGY----------RM 404 (454)
T ss_dssp -TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHH---HTC----------CC
T ss_pred -ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---cCC----------CC
Confidence 1223457889999999999999999999999999999999 8988753221 11111111 110 01
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccC
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF 777 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 777 (823)
..+......+.+++..||+.||++||||.+|+++|+....
T Consensus 405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 1122344578899999999999999999999999988743
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-33 Score=322.33 Aligned_cols=236 Identities=24% Similarity=0.383 Sum_probs=181.5
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
..++|++.++||+|+||.||+|++.. +..||||.++... ...++|.+|+.++++++|||||+++++|.+.+..+||||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 45678999999999999999999875 7899999997643 346889999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||++|+|.+++..... ..+.+.....+ +.||+.+.++.+||+|||+++.+..+...
T Consensus 297 ~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~- 374 (495)
T 1opk_A 297 FMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT- 374 (495)
T ss_dssp CCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE-
T ss_pred ccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee-
Confidence 9999999999964322 12333333322 23444578889999999999987544322
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......+|+.|||||++....++.++|||||||+||||++ |+.|+...... .+... ... .....
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~----~~~---------~~~~~ 439 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYEL----LEK---------DYRME 439 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH----HHT---------TCCCC
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHH----HHc---------CCCCC
Confidence 2223467889999999999999999999999999999999 88887533211 11111 111 11111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.+......+.+++..||+.||++||||.+|+++|+...
T Consensus 440 ~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 440 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 22334567888999999999999999999999998764
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-33 Score=319.13 Aligned_cols=240 Identities=25% Similarity=0.389 Sum_probs=174.9
Q ss_pred HHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
...++|++.++||+|+||.||+|++.++..||||.++... ...++|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 3457799999999999999999999888889999997643 345789999999999999999999999876 67899999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++|+|.+++.... ...+.+.....+ +.||+.+.++.+||+|||+++.+......
T Consensus 259 ~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~- 336 (452)
T 1fmk_A 259 YMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 336 (452)
T ss_dssp CCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred hhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee-
Confidence 999999999996321 112333333222 23444578889999999999876543322
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......+|+.|||||.+....++.++|||||||++|||++ |+.|+..... ...... . ..+ ....
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~---i-~~~---------~~~~ 401 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQ---V-ERG---------YRMP 401 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH---H-HTT---------CCCC
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHH---H-HcC---------CCCC
Confidence 2223467889999999999999999999999999999999 8888743221 111111 1 111 0111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCC
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~ 780 (823)
.+......+.+++..||+.||++|||+.+|+++|+......+
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 222345678889999999999999999999999998754443
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-32 Score=303.68 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=183.0
Q ss_pred ccHHHHHHHhcCcceeeeeccccceeEEeeee------cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeE
Q 003402 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRL 586 (823)
Q Consensus 515 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~------~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l 586 (823)
+.........++|++.++||+|+||.||+|++ .+++.||||+++... ....+.|.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455566778999999999999999999974 235789999997643 34456899999999999 89999999
Q ss_pred EeEEEeCC-eEEEEEEcccCCCchhhccCCCcc-----------------------------------------------
Q 003402 587 LGCCIEQG-EKILIYEYMVNKSLDVFLFDPTKK----------------------------------------------- 618 (823)
Q Consensus 587 ~g~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~----------------------------------------------- 618 (823)
++++.+.+ ..++||||+++|+|.+++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998865 489999999999999998654320
Q ss_pred ----------------cccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccc
Q 003402 619 ----------------HLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 619 ----------------~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
..+.+.....++ .||..+.++.+||+|||+++.+........
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 251 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEE
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchh
Confidence 113443333332 334447788999999999997754443333
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....||+.|||||++.+..++.++|||||||++|||++ |+.|+....... .+... ...+.. ...
T Consensus 252 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~----~~~~~~---------~~~ 317 (359)
T 3vhe_A 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR----LKEGTR---------MRA 317 (359)
T ss_dssp C--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHH----HHHTCC---------CCC
T ss_pred ccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHH----HHcCCC---------CCC
Confidence 445679999999999999999999999999999999999 999875433221 11111 111100 111
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+......+.+++..||+.||++|||+.||+++|+..
T Consensus 318 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 318 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 122345678899999999999999999999999875
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-34 Score=305.11 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=175.1
Q ss_pred cCcceeeeeccccceeEEeeee-----cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~ 597 (823)
++|++.++||+|+||.||+|++ .+++.||||++........+.|.+|+.++.+++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 6789999999999999999984 25789999999877666778899999999999999999999999653 5689
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||+++|+|.+++..... .+.+.....+ +.||..+.++.+||+|||+++.+...
T Consensus 90 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 99999999999999864321 2333333222 23444577889999999999877543
Q ss_pred ccc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC----ccccc
Q 003402 656 ELQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND----RAHEL 730 (823)
Q Consensus 656 ~~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~----~~~~l 730 (823)
... .......||..|+|||.+.+..++.++||||||+++|||++|..|+.....+ ............ ...+.
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHHHH
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHHHH
Confidence 221 2223356788899999999999999999999999999999999886432110 000000000000 00000
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCC
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 778 (823)
+........+......+.+++..||+.||++|||+.||+++|+.....
T Consensus 245 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 001111122333456788999999999999999999999999876433
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=301.66 Aligned_cols=229 Identities=23% Similarity=0.320 Sum_probs=174.2
Q ss_pred hcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 36799999999999999999987 46899999999653 3345678999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|.+++...... |..++.||+..+.||..+.++.+||+|||+++...... ..
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---~~ 170 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KL 170 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC---GG
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC---cc
Confidence 999999999988542211 11112222223345566889999999999998764432 23
Q ss_pred ccccccccccccccccCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFS-VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s-~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
...+||+.|+|||.+.+..+. .++|||||||++|||++|+.||..... ..+.. ..... . ...+
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~---~i~~~-~----------~~~p 234 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRE---RVLRG-K----------YRIP 234 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHHC-C----------CCCC
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHH---HHHhC-C----------CCCC
Confidence 456899999999999988875 899999999999999999999853321 11111 11110 0 0112
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.||.+|||+.|+++.
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2234567889999999999999999999875
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-33 Score=293.25 Aligned_cols=233 Identities=26% Similarity=0.397 Sum_probs=177.7
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|++.++||+|+||.||+|+..+++.||||++.... ...+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 36789999999999999999999888999999997643 34578999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++....... ...
T Consensus 88 ~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSS 164 (269)
T ss_dssp TTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HST
T ss_pred CCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccccc-ccc
Confidence 99999999965332 23333332222 344446788999999999987644322 222
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....||+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... ..... . ..+ . ....+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~---~-~~~-----~----~~~~~ 229 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVED---I-STG-----F----RLYKP 229 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH---H-HTT-----C----CCCCC
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHH---H-hcC-----c----cCCCC
Confidence 33567889999999999999999999999999999999 88887532211 11111 1 110 0 00111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+.+++..||+.||++||++.+++++|+..
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 12245678899999999999999999999999865
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-32 Score=296.26 Aligned_cols=231 Identities=22% Similarity=0.270 Sum_probs=172.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 68999999999999999999876 58899999986543 23346789999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++|+|.+++..... +.+.....+ +.||..+.++.+||+|||+++.+........
T Consensus 87 ~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 87 CSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp CTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 999999999865322 333332222 2344557888999999999987654333333
Q ss_pred cccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....||+.|+|||++.+..+ +.++|||||||++|||++|+.|+............+. ... .... .
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-----~~~--~~~~------~ 230 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-----EKK--TYLN------P 230 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH-----TTC--TTST------T
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-----ccc--ccCC------c
Confidence 445789999999999988776 7899999999999999999999864433222111111 100 0000 0
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++..||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11234566789999999999999999999875
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-32 Score=302.58 Aligned_cols=242 Identities=24% Similarity=0.352 Sum_probs=183.6
Q ss_pred HhcCcceeeeeccccceeEEeeeec--------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL--------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE 592 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~--------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~ 592 (823)
..++|.+.++||+|+||.||+|+.. .+..||||++... .....+++.+|++++.++ +|||||++++++.+
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 4478999999999999999999853 2357999999764 334557899999999999 99999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHHHH----------------------hcccccc
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRII----------------------DGIAQDQ 637 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i~----------------------~~ia~d~ 637 (823)
.+..++||||+++|+|.+++..... ...+.+..+..++ .||+.+.
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 226 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 226 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC
Confidence 9999999999999999999864321 1224444444433 3344477
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~ 716 (823)
++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++ |+.|+..... ..+..
T Consensus 227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~~~~~ 304 (382)
T 3tt0_A 227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFK 304 (382)
T ss_dssp TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHH
T ss_pred CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHH
Confidence 88999999999997765443344445678999999999999999999999999999999999 8888753221 11111
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
....+.. ...+......+.+++..||+.||++||++.||++.|+......
T Consensus 305 ----~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 305 ----LLKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp ----HHHTTCC---------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred ----HHHcCCC---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 1111111 1111223456888999999999999999999999998875333
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=312.40 Aligned_cols=229 Identities=25% Similarity=0.383 Sum_probs=174.0
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-eEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG-EKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~-~~~lV~E 601 (823)
..++|++.++||+|+||.||+|++. ++.||||.++... ..++|.+|+.++++++|||||++++++.+.+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 4467899999999999999999884 7899999997643 4578999999999999999999999998765 7999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||++|+|.+++..... ..+.......+ +.||+.+.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----
Confidence 9999999999964322 11233322222 23444578899999999999865322
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.....+|+.|||||.+.+..++.++|||||||+||||+| |+.|+...... ...... ..+ ....
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i----~~~---------~~~~ 406 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRV----EKG---------YKMD 406 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHH----HTT---------CCCC
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH----HcC---------CCCC
Confidence 122367899999999999999999999999999999999 99887543322 111111 111 0111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+......+.+++..||+.||++|||+.+|++.|+..
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 2233456788899999999999999999999999864
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-32 Score=298.13 Aligned_cols=243 Identities=23% Similarity=0.363 Sum_probs=182.2
Q ss_pred HHHHHhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEE
Q 003402 519 SVTAATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591 (823)
Q Consensus 519 ~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~ 591 (823)
.+....++|++.+.||+|+||.||+|+..+ ++.||||.++... ....+.|.+|+.++.+++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 334456889999999999999999998753 4789999997643 344578999999999999999999999999
Q ss_pred eCCeEEEEEEcccCCCchhhccCCCc---------------------ccccCHHHHHHHH--------------------
Q 003402 592 EQGEKILIYEYMVNKSLDVFLFDPTK---------------------KHLLGWQLRVRII-------------------- 630 (823)
Q Consensus 592 ~~~~~~lV~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~r~~i~-------------------- 630 (823)
+.+..++||||+++|+|.+++..... ...+.+.....++
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 200 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 99999999999999999999864321 0234444433333
Q ss_pred --hccccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003402 631 --DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVY 707 (823)
Q Consensus 631 --~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~ 707 (823)
.||..+.++.+||+|||+++.+.............||+.|+|||.+.+..++.++|||||||++|||++ |+.|+...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 334447788999999999987754433333445678999999999999999999999999999999999 88887532
Q ss_pred CCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 708 NTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 708 ~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.. ..+.. .. ..+... ..+......+.+++..||+.||++||++.+|+++|+...
T Consensus 281 ~~--~~~~~---~~-~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 281 AH--EEVIY---YV-RDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp CH--HHHHH---HH-HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred Ch--HHHHH---HH-hCCCcC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 21 11111 11 111111 112223456888999999999999999999999998874
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-32 Score=303.01 Aligned_cols=238 Identities=26% Similarity=0.381 Sum_probs=177.5
Q ss_pred hcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
.++|++.++||+|+||.||+|++. +++.||||+++.. ......++.+|+.++.+++|||||++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 367899999999999999999853 3668999999754 344556899999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCc----ccccCHHHHHHHH----------------------hccccc---cCCCceeceee
Q 003402 597 ILIYEYMVNKSLDVFLFDPTK----KHLLGWQLRVRII----------------------DGIAQD---QHMNPKISDFG 647 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~----~~~l~~~~r~~i~----------------------~~ia~d---~~~~~KI~DFG 647 (823)
++||||+++|+|.+++..... ...+.+.....++ .||+.+ .+..+||+|||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 999999999999999864321 1224444333333 334445 34459999999
Q ss_pred ceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 648 MARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 648 la~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
+|+.+.............||+.|||||.+.+..++.++|||||||++|||++ |+.|+..... ..+... . ..+.
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~---i-~~~~ 303 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEF---V-TSGG 303 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHH---H-HTTC
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH---H-HcCC
Confidence 9986643333333445678999999999999999999999999999999998 8888753221 111111 1 1111
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
. ...+......+.+++..||+.||++||++.+|++.|+...
T Consensus 304 ~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 304 R---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 0 1112223456788999999999999999999999997753
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=290.09 Aligned_cols=233 Identities=27% Similarity=0.373 Sum_probs=178.2
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|++.+.||+|+||.||+|+..++..||||.+.... ...+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 46799999999999999999999888899999997643 34578999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++......... .
T Consensus 86 ~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~-~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS-S 162 (268)
T ss_dssp TTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE-C
T ss_pred CCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc-c
Confidence 99999999854321 23333333332 34444788899999999999775543222 2
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....||+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... ... ....... ... .+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~---~~~~~~~---~~~-------~~ 227 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVV---LKVSQGH---RLY-------RP 227 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHH---HHHHTTC---CCC-------CC
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHH---HHHHcCC---CCC-------CC
Confidence 23467788999999998899999999999999999999 88887533221 111 1111110 000 11
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+.+++..||+.||++|||+.++++.|+..
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 11234678899999999999999999999999876
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-33 Score=303.52 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=180.2
Q ss_pred cCcceeeeeccccceeEEeeee-----cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEE--eCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI--EQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~--~~~~~~ 597 (823)
++|++.++||+|+||.||++++ .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 6799999999999999999984 357899999998776666788999999999999999999999987 456789
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||+++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 99999999999999864211 23443333332 3444478889999999999987543
Q ss_pred cc-ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 656 EL-QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 656 ~~-~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.. ........||+.|+|||.+.+..++.++||||||+++|||++|+.|+.....+..................+.+...
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 32 12233456889999999999999999999999999999999999986422110000000000000000000111111
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
.....+......+.+++..||+.||++|||+.+|+++|+......
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 112223344567889999999999999999999999998875433
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-31 Score=284.62 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=182.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--eEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG--EKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~--~~~lV~ 600 (823)
++|.+.++||+|+||.||+|+... ++.||||++.... ....+.+.+|++++++++||||+++++++.+.. ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 568999999999999999998765 8999999997543 344678899999999999999999999998765 789999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccc----ccCCCceeceeeceeecCC
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQ----DQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~----d~~~~~KI~DFGla~~~~~ 654 (823)
||+++++|.+++........+.+.....++ .||.. +.++.+||+|||+++.+..
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999999999764433334444443333 23333 5566799999999998754
Q ss_pred Ccccccccccccccccccccccc--------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc--cchhHHHHhhccC
Q 003402 655 DELQGNTKRIVGTYGYMSPEYAL--------EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS--FNLLGHAWSLCKN 724 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~--------~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~--~~l~~~~~~~~~~ 724 (823)
... .....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .............
T Consensus 169 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 169 DEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245 (319)
T ss_dssp TCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCT
T ss_pred CCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCc
Confidence 432 23467999999999986 5789999999999999999999999986443321 1111111111111
Q ss_pred Ccccc---ccCc--------ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 725 DRAHE---LMDP--------VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 725 ~~~~~---l~d~--------~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..... .... .............+.+++..||+.||++|||+.|+++......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 10000 0000 0111334566778899999999999999999999999987663
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-32 Score=291.67 Aligned_cols=234 Identities=26% Similarity=0.369 Sum_probs=175.5
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
..++|++.++||+|+||.||+|+..++..||||.+.... ...+++.+|++++.+++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 446899999999999999999999888899999997643 3357899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++....... ..
T Consensus 101 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TS 177 (283)
T ss_dssp CTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-HS
T ss_pred cCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccc-cc
Confidence 999999999865221 23333333322 344457888999999999987644322 12
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....||+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... .... ...... ....
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~---~~~~~~----------~~~~ 242 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAE---HIAQGL----------RLYR 242 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH---HHHTTC----------CCCC
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHH---HHhccc----------CCCC
Confidence 233467889999999999999999999999999999998 99887543211 1111 111110 0011
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+......+.+++..||+.||++|||+.++++.|+..
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 112235678899999999999999999999999765
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=290.40 Aligned_cols=239 Identities=25% Similarity=0.388 Sum_probs=180.9
Q ss_pred HhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
..++|.+.+.||+|+||.||+|+.. +++.||||.+... .....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 3477999999999999999999762 3578999999754 34456789999999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCc---------------------ccccCHHHHHHHH----------------------hc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTK---------------------KHLLGWQLRVRII----------------------DG 632 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~r~~i~----------------------~~ 632 (823)
.++||||+++|+|.+++..... ...+.+.....++ .|
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N 180 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN 180 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchhe
Confidence 9999999999999999864321 1123333333332 23
Q ss_pred cccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCc
Q 003402 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDS 711 (823)
Q Consensus 633 ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~ 711 (823)
|..+.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |+.|+......
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 259 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE- 259 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 4446788999999999998755443333444578899999999999999999999999999999999 88887543221
Q ss_pred cchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 712 FNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 712 ~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.+... ...+. ....+......+.+++..||+.||++||++.+|++.|+..+
T Consensus 260 -~~~~~----~~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 260 -RLFNL----LKTGH---------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp -GHHHH----HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHH----hhcCC---------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111 11111 01112233456888999999999999999999999998753
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-32 Score=295.43 Aligned_cols=242 Identities=26% Similarity=0.414 Sum_probs=179.7
Q ss_pred HhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQG 594 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~ 594 (823)
..++|.+.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++.++ +||||+++++++.+.+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 4578999999999999999999862 35689999997542 33456899999999999 8999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHH----------------------hc
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRII----------------------DG 632 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~----------------------~~ 632 (823)
..++||||+++|+|.+++...... ..+.+.....++ .|
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N 202 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 202 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence 999999999999999999654321 123444333333 33
Q ss_pred cccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCc
Q 003402 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDS 711 (823)
Q Consensus 633 ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~ 711 (823)
|..+.++.+||+|||+++.+.............||+.|+|||.+.+..++.++|||||||++|||+| |+.|+.......
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 282 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence 4447788999999999987754433333445678999999999999999999999999999999998 988875443221
Q ss_pred cchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCC
Q 003402 712 FNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778 (823)
Q Consensus 712 ~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 778 (823)
.+. .....+ .....+......+.+++..||+.||.+||++.+|+++|+..+..
T Consensus 283 -~~~----~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 283 -NFY----KLIQNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp -HHH----HHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -HHH----HHHhcC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111 111111 01111222345688899999999999999999999999887543
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-32 Score=290.52 Aligned_cols=237 Identities=24% Similarity=0.342 Sum_probs=172.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+++.. +++.||||.+... .....+.|.+|+.++.+++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 67999999999999999999865 5889999998543 2344578999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++++|.+++.... .+.+..... .+.||..+.++.+||+|||+++.+.....
T Consensus 91 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 166 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL- 166 (294)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc-
Confidence 9999999999985432 123322222 23345557888999999999987643321
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.......||+.|||||.+.+..++.++|||||||++|||++|+.|+...... ......... .... ....
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-----~~~~~~~~~-~~~~-----~~~~ 235 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-----SIAIKHIQD-SVPN-----VTTD 235 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-----HHHHHHHSS-CCCC-----HHHH
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhhc-cCCC-----cchh
Confidence 2233467999999999999999999999999999999999999998533211 111111111 0000 0111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCC-CHHHHHHHHhccc
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRP-TMSDVVSMINNEL 776 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~ 776 (823)
........+.+++..|++.||++|| ++.++.+.|+..+
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 1223345688899999999999998 8999999998764
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=287.28 Aligned_cols=238 Identities=22% Similarity=0.401 Sum_probs=169.9
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|++.+.||+|+||.||+|+.. ++.||||.+... ...+.|.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 56889999999999999999874 788999999653 34578999999999999999999999886 34789999999
Q ss_pred CCCchhhccCCCcccccCHHHHHH-------------------------HHhccccccCCC-ceeceeeceeecCCCccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVR-------------------------IIDGIAQDQHMN-PKISDFGMARMFGGDELQ 658 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~-------------------------i~~~ia~d~~~~-~KI~DFGla~~~~~~~~~ 658 (823)
+|+|.+++................ .+.||..+.++. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 999999997644322223322221 122333355555 799999999865332
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.|+.......... .+..... ....
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~-~~~~--------- 224 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI---MWAVHNG-TRPP--------- 224 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH---HHHHHTT-CCCC---------
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH---HHHHhcC-CCCC---------
Confidence 223469999999999999999999999999999999999999986443322111 1111111 1111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCCCCCCC
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~p~~p 785 (823)
........+.+++..||+.||++|||+.+++++|+......+.+..|
T Consensus 225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~ 271 (307)
T 2eva_A 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271 (307)
T ss_dssp CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSC
T ss_pred cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCc
Confidence 11122346788999999999999999999999998876555544444
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=295.78 Aligned_cols=247 Identities=24% Similarity=0.303 Sum_probs=176.7
Q ss_pred cceeeeeccccceeEEeeeec-----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKIL 598 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-----~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~l 598 (823)
|++.++||+|+||.||++.+. +++.||||++.... ....+.|.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 588999999999999888643 57899999997643 34467899999999999999999999999984 68899
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++|+|.+++.... +.+.....++ .||..+.++.+||+|||+++......
T Consensus 113 v~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 999999999999996533 3333333332 34445788899999999999875432
Q ss_pred c-ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 L-QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~-~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
. ........||+.|+|||.+.+..++.++||||||+++|||++|+.|+........................+.++...
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 2 122334578899999999999999999999999999999999999874321110000000000000000111111111
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccC
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF 777 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 777 (823)
....+......+.+++..||+.||++||++.|+++.|+....
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 122233445678899999999999999999999999987643
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-32 Score=320.61 Aligned_cols=239 Identities=26% Similarity=0.386 Sum_probs=179.4
Q ss_pred HHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
...++|++.++||+|+||.||+|++.++..||||+++... ...++|.+|+++|++++|||||++++++.+ +..+||||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3457799999999999999999999888889999997643 345789999999999999999999999876 67899999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||++|+|.++|..... ..+.+.....+ +.||+.+.++.+||+|||+++.+......
T Consensus 342 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~- 419 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 419 (535)
T ss_dssp CCTTEEHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH-
T ss_pred hhcCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee-
Confidence 9999999999963211 11333332222 33455578889999999999876543221
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......+|+.|||||.+....++.++|||||||+||||++ |+.|+..... ..+.... ..+. ...
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i----~~~~---------~~~ 484 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV----ERGY---------RMP 484 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHH----HTTC---------CCC
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----HcCC---------CCC
Confidence 1223467889999999999999999999999999999999 8888743221 1111111 1110 011
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
.+......+.+++..||+.||++|||+.+|+++|+......
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 12234456888999999999999999999999999875433
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=289.48 Aligned_cols=240 Identities=24% Similarity=0.352 Sum_probs=181.3
Q ss_pred HhcCcceeeeeccccceeEEeeee------cCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQG 594 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~------~~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~ 594 (823)
..++|++.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.++.++ +||||+++++++.+.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346799999999999999999975 2467899999975432 3457899999999999 9999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCcc---------------cccCHHHHHHHH----------------------hcccccc
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKK---------------HLLGWQLRVRII----------------------DGIAQDQ 637 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~---------------~~l~~~~r~~i~----------------------~~ia~d~ 637 (823)
..++||||+++|+|.+++...... ..+.+.....++ .||..+.
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 180 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC
Confidence 999999999999999998643211 124444433333 2334467
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~ 716 (823)
++.+||+|||+++...............||+.|+|||.+.+..++.++||||||+++|||++ |+.|+....... .+..
T Consensus 181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~ 259 (313)
T 1t46_A 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYK 259 (313)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HHHH
T ss_pred CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HHHH
Confidence 88999999999998765543333344678899999999999999999999999999999999 888875433221 1111
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.. ... .....+......+.+++..||+.||++||++.|++++|+..+
T Consensus 260 ~~----~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 260 MI----KEG---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HH----HHT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hh----ccC---------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 11 110 001111223456888999999999999999999999998764
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=295.63 Aligned_cols=230 Identities=20% Similarity=0.232 Sum_probs=171.4
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
.+.|++.++||+|+||.||+++.. +++.||||.+..... ...+.+.+|+.++.+++|||||++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 367999999999999999999876 489999999975432 1357899999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCC----Cceeceeecee
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHM----NPKISDFGMAR 650 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~----~~KI~DFGla~ 650 (823)
++||||+++|+|.+++.... .+.......+ +.||..+.++ .+||+|||+++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999999986432 1222222222 2334434444 79999999999
Q ss_pred ecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccc
Q 003402 651 MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 651 ~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
.+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...... . ..... -
T Consensus 168 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~~---i-~~~~~--~ 236 (361)
T 2yab_A 168 EIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLAN---I-TAVSY--D 236 (361)
T ss_dssp ECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHH---H-HTTCC--C
T ss_pred EcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH---H-HhcCC--C
Confidence 875432 22346799999999999999999999999999999999999999853221 111111 1 00000 0
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.++... ......+.+++..||+.||++|||+.|+++.
T Consensus 237 ~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 237 FDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 011100 1123467889999999999999999998863
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-32 Score=295.58 Aligned_cols=229 Identities=19% Similarity=0.218 Sum_probs=173.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||+||+++.. +++.||||.+++. .....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 67999999999999999999876 4899999999753 2334577899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++...... ...
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--~~~ 162 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATM 162 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--CCB
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--Ccc
Confidence 999999999888532210 11111222223345666889999999999998643322 223
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...+||+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+... .... . ...+.
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~---i~~~-~----------~~~p~ 226 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFEL---ILME-E----------IRFPR 226 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH---HHHC-C----------CCCCT
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHH---HHcC-C----------CCCCC
Confidence 457899999999999999999999999999999999999999853221 111111 1110 0 01122
Q ss_pred HHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
.....+.+++..||+.||++|| ++.||++.
T Consensus 227 ~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 2345678899999999999999 89998764
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=292.16 Aligned_cols=230 Identities=19% Similarity=0.254 Sum_probs=172.6
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|.+.+.||+|+||.||+++... ++.||+|.+... ....+.+.+|+.++..++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 3679999999999999999998764 789999999754 33456789999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccccc--CCCceeceeeceeecCCCccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQ--HMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~--~~~~KI~DFGla~~~~~~~~~ 658 (823)
+++|+|.+++..... .+.......++ .||..+. ++.+||+|||+++.+....
T Consensus 83 ~~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-- 158 (321)
T ss_dssp CCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--
Confidence 999999999865321 23333322222 2333344 7899999999999875432
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......||+.|+|||++.+..++.++|||||||++|||++|+.|+..... ...... ..... . . .+....
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~---i~~~~-~-~-~~~~~~-- 227 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIEN---IMNAE-Y-T-FDEEAF-- 227 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHH---HHHTC-C-C-CCHHHH--
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHH---HHcCC-C-C-CChhhh--
Confidence 22346799999999999998899999999999999999999999853221 111111 11000 0 0 000000
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.||++|||+.|+++.
T Consensus 228 --~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 --KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1124567889999999999999999999985
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-32 Score=293.61 Aligned_cols=241 Identities=21% Similarity=0.351 Sum_probs=163.4
Q ss_pred HHhcCcceeeeeccccceeEEeeeecCC----cEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLNG----QEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~----~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
...++|++.+.||+|+||.||+|+.... ..||||.++.. .....++|.+|++++++++||||+++++++.+...
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 3457899999999999999999987643 27999999754 34456789999999999999999999999988765
Q ss_pred E------EEEEEcccCCCchhhccCCCc---ccccCHHHHHHHH----------------------hccccccCCCceec
Q 003402 596 K------ILIYEYMVNKSLDVFLFDPTK---KHLLGWQLRVRII----------------------DGIAQDQHMNPKIS 644 (823)
Q Consensus 596 ~------~lV~Ey~~~gsL~~~l~~~~~---~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~ 644 (823)
. ++||||+++|+|.+++..... ...+.+.....++ .||..+.++.+||+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEe
Confidence 5 999999999999998853211 1123333333332 34445788899999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhcc
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |+.|+...... .+.... ..
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~---~~ 254 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYNYL---IG 254 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH---HT
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHHHH---hc
Confidence 9999987755443333344567889999999999999999999999999999999 88887543221 111111 01
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccC
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF 777 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 777 (823)
.. . ...+......+.+++..||+.||++|||+.++++.|+..+.
T Consensus 255 ~~-~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 255 GN-R---------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp TC-C---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-C---------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 10 0 11122334568899999999999999999999999988753
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=298.81 Aligned_cols=234 Identities=23% Similarity=0.316 Sum_probs=170.1
Q ss_pred cCcceeeeeccccceeEEeeeecC-Cc----EEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.++||+|+||.||+|+... ++ .||+|.+.... ....+++.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 578999999999999999998643 44 38888886432 333467889999999999999999999986 567889
Q ss_pred EEEcccCCCchhhccCCCcccccCHHH----------------------HHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQL----------------------RVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~----------------------r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++|+|.+++..... .+.+.. ++..+.||+.+.++.+||+|||+++.+....
T Consensus 92 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999865321 122211 1222234555788999999999999876554
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.........||+.|+|||.+.+..++.++|||||||++|||++ |+.|+...... .+.... ..+...
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~----~~~~~~------- 236 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLL----EKGERL------- 236 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHH----HTTCBC-------
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHH----HcCCCC-------
Confidence 4444455678899999999999999999999999999999999 99998643322 111111 111000
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..+......+.+++..||+.||++||++.+++++|+...
T Consensus 237 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 237 --AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp --CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred --CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 011112234667899999999999999999999998764
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-32 Score=285.86 Aligned_cols=228 Identities=26% Similarity=0.443 Sum_probs=161.8
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC----hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~----~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.++|++.++||+|+||.||+|+.. ++.||||.+.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 367899999999999999999974 7899999986532 23357899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHH-------------------------HHhcccccc--------CCCceecee
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVR-------------------------IIDGIAQDQ--------HMNPKISDF 646 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~-------------------------i~~~ia~d~--------~~~~KI~DF 646 (823)
|||+++++|.+++.... +.+..... .+.||..+. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~~~----~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGKR----IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTSSC----CCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999999985432 22222222 222333333 677999999
Q ss_pred eceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
|+++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... ..........
T Consensus 161 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~- 230 (271)
T 3dtc_A 161 GLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-----AVAYGVAMNK- 230 (271)
T ss_dssp CC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHHHHHHTSC-
T ss_pred Cccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHhhhcCC-
Confidence 9998764332 22357999999999999999999999999999999999999998533211 1111111111
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.....+......+.+++..||+.||++||++.|++++|+.
T Consensus 231 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 231 --------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred --------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 0111222334568889999999999999999999999975
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=288.29 Aligned_cols=231 Identities=21% Similarity=0.285 Sum_probs=168.6
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-------
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG------- 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~------- 594 (823)
.++|++.++||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++|||||++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357899999999999999999986 68999999997543 335578999999999999999999999997654
Q ss_pred --------------------------------------------------eEEEEEEcccCCCchhhccCCCcccccCHH
Q 003402 595 --------------------------------------------------EKILIYEYMVNKSLDVFLFDPTKKHLLGWQ 624 (823)
Q Consensus 595 --------------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~ 624 (823)
..++||||+++|+|.+++..........+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 389999999999999999765443333332
Q ss_pred HHH----HH------------------HhccccccCCCceeceeeceeecCCCccc----------cccccccccccccc
Q 003402 625 LRV----RI------------------IDGIAQDQHMNPKISDFGMARMFGGDELQ----------GNTKRIVGTYGYMS 672 (823)
Q Consensus 625 ~r~----~i------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~----------~~~~~~~Gt~~YmA 672 (823)
... ++ +.||..+.++.+||+|||+++.+...... .......||+.|+|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 222 22 23444577889999999999987654211 12234579999999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHH
Q 003402 673 PEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVAL 752 (823)
Q Consensus 673 PE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~ 752 (823)
||.+.+..++.++|||||||++|||++|..|.. ..... ......... + .........+.+++.
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-------~~~~~-~~~~~~~~~-----~----~~~~~~~~~~~~li~ 307 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-------ERVRI-ITDVRNLKF-----P----LLFTQKYPQEHMMVQ 307 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-------HHHHH-HHHHHTTCC-----C----HHHHHHCHHHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-------HHHHH-HHHhhccCC-----C----cccccCChhHHHHHH
Confidence 999999999999999999999999999876531 00000 000001000 0 001223455688999
Q ss_pred HccccCcCCCCCHHHHHHH
Q 003402 753 LCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 753 ~Cl~~dP~~RPt~~evl~~ 771 (823)
.||+.||++||++.|+++.
T Consensus 308 ~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 308 DMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHCSSGGGSCCHHHHHHS
T ss_pred HHccCCCCcCCCHHHHhhc
Confidence 9999999999999999874
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=288.51 Aligned_cols=240 Identities=21% Similarity=0.273 Sum_probs=169.3
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||+||+|+..+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 6799999999999999999999889999999997432 22346789999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++ +|.+++..... .+....... .+.||..+.++.+||+|||+++...... ..
T Consensus 101 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~ 175 (311)
T 3niz_A 101 MEK-DLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV--RS 175 (311)
T ss_dssp CSE-EHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--C-
T ss_pred CCC-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--cc
Confidence 985 77777654321 122222222 2234555788999999999999864332 12
Q ss_pred cccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc---c--------
Q 003402 661 TKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA---H-------- 728 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~---~-------- 728 (823)
.....||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+....... .............. .
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD--QLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT--HHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHHCCCChHHhhhhhccchh
Confidence 234578999999999876 568999999999999999999999986443321 11111111111000 0
Q ss_pred -----cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 -----ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 -----~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+.............++.+++..||+.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000000111223567889999999999999999999874
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=290.16 Aligned_cols=239 Identities=25% Similarity=0.385 Sum_probs=180.3
Q ss_pred HhcCcceeeeeccccceeEEeeeec--------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL--------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE 592 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~--------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~ 592 (823)
..++|.+.+.||+|+||.||+|+.. +++.||||++... .....+++.+|+.++.++ +||||+++++++.+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3478999999999999999999863 4678999999754 334567899999999999 89999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHHHH----------------------hcccccc
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRII----------------------DGIAQDQ 637 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i~----------------------~~ia~d~ 637 (823)
.+..++||||+++|+|.+++..... ...+.+.....++ .||..+.
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC
Confidence 9999999999999999999975432 1124444433333 2334477
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~ 716 (823)
++.+||+|||+++.+.............||+.|+|||.+.+..++.++|||||||++|||++ |+.|+..... ..+..
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~ 270 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFK 270 (334)
T ss_dssp TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHH
T ss_pred CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH--HHHHH
Confidence 88999999999998765443333444578899999999998899999999999999999999 8888753221 11111
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.. ..+.. ...+......+.+++..||+.||++||++.+|++.|+...
T Consensus 271 ~~----~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 271 LL----KEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp HH----HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH----hcCCC---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11 11100 1112223456888999999999999999999999998764
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-32 Score=317.87 Aligned_cols=234 Identities=24% Similarity=0.329 Sum_probs=170.8
Q ss_pred cCcceee-eeccccceeEEeeeec---CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQS-KLGEGGFGPVYKGRLL---NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~-~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
+++.+.+ +||+|+||.||+|.+. ++..||||+++... ....++|.+|++++++++|||||+++++|.+ +..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 4555555 8999999999999874 35679999997643 3456889999999999999999999999976 568999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||||++|+|.+++.... ..+.+.....+ +.||+.+.++.+||+|||+++.+..+..
T Consensus 414 ~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp EECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999986432 22344333333 2345557888999999999987654322
Q ss_pred -ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 658 -QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 658 -~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
........+|+.|||||++....++.++|||||||+||||++ |+.|+...... .+... ...+.
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~----i~~~~--------- 556 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAF----IEQGK--------- 556 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHH----HHTTC---------
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHH----HHcCC---------
Confidence 112223456789999999999999999999999999999998 99998543221 11111 11111
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
....+......+.+++..||+.||++||++.+|+++|+...
T Consensus 557 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 557 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11122334567889999999999999999999999998753
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-31 Score=288.83 Aligned_cols=229 Identities=21% Similarity=0.249 Sum_probs=170.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
+.|.+.+.||+|+||.||+++.. +++.||||.+..... ...+.+.+|+.++.+++||||+++++++.+.+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 56899999999999999999876 489999999875422 23678999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCC----Cceeceeeceee
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHM----NPKISDFGMARM 651 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~----~~KI~DFGla~~ 651 (823)
+||||+++|+|.+++.... .+.......++ .||..+.++ .+||+|||+++.
T Consensus 91 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999999986432 23333322222 233334555 799999999998
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
+.... ......||+.|||||++.+..++.++|||||||++|||++|+.|+..... ......... . . ...
T Consensus 168 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~~~~---~-~-~~~- 236 (326)
T 2y0a_A 168 IDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANVSA---V-N-YEF- 236 (326)
T ss_dssp CCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHH---T-C-CCC-
T ss_pred CCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHHh---c-C-CCc-
Confidence 75432 22346799999999999999999999999999999999999999853221 111111100 0 0 000
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.... .......+.+++..||+.||++|||+.|+++.
T Consensus 237 ~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 237 EDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CHHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred Cccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 01123467889999999999999999999884
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=282.44 Aligned_cols=230 Identities=24% Similarity=0.468 Sum_probs=168.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChh-------hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ-------GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~-------~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
.++|++.+.||+|+||.||+|+.. +++.||||.+...... ..++|.+|+.++.+++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367999999999999999999875 5889999998643221 1267999999999999999999999986655
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHHHHHH------------------------HhccccccCCC-----ceecee
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI------------------------IDGIAQDQHMN-----PKISDF 646 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i------------------------~~~ia~d~~~~-----~KI~DF 646 (823)
++||||+++|+|.+++..... .+.+.....+ +.||..+.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 699999999999888865332 2333332222 22333344444 899999
Q ss_pred eceeecCCCccccccccccccccccccccc--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYA--LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~--~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
|+++.... ......||+.|+|||.+ ....++.++|||||||++|||++|+.|+................ .
T Consensus 174 g~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~ 245 (287)
T 4f0f_A 174 GLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE---E 245 (287)
T ss_dssp TTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH---S
T ss_pred Cccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc---c
Confidence 99985432 23346799999999998 45568999999999999999999999986544332222211111 1
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
. .....+......+.+++..||+.||++||++.+|++.|+.
T Consensus 246 ~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 246 G---------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp C---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred C---------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1 0111222334578889999999999999999999999975
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-32 Score=296.36 Aligned_cols=231 Identities=22% Similarity=0.278 Sum_probs=165.2
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCC--CceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQH--RNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H--~Niv~l~g~~~~~~~~~lV 599 (823)
.+.|++.++||+|+||.||++...+++.||||++... ..+..+.|.+|+.++.+++| |||+++++++.+++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 3569999999999999999999888999999998643 34456789999999999976 9999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|| +.+++|.+++.... .+.+..+..++ .||+.+ ++.+||+|||+++.+.....
T Consensus 88 ~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred Ee-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 99 56889999986432 23333332222 233333 56799999999988755443
Q ss_pred ccccccccccccccccccccC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 658 QGNTKRIVGTYGYMSPEYALE-----------GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~-----------~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
........||+.|||||++.+ ..++.++|||||||++|||++|+.|+...... ......
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~------ 232 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----ISKLHA------ 232 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH----HHHHHH------
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH----HHHHHH------
Confidence 333445689999999999864 67899999999999999999999998533221 111111
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
++++......+......+.+++..||+.||++|||+.|+++..
T Consensus 233 ---~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 233 ---IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp ---HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1111111112222234678899999999999999999998753
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=284.99 Aligned_cols=238 Identities=22% Similarity=0.382 Sum_probs=164.3
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.++||+|+||.||+|+... .||||.++.. .....+.|.+|+.++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4679999999999999999998643 5999998754 344567899999999999999999999965 5567899999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++.........
T Consensus 100 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 100 WCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred ecCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999999999864322 23333333222 34444778899999999998765433233
Q ss_pred cccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 660 NTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
......||+.|+|||.+. ...++.++||||||+++|||++|+.|+....... .+.... ..+......
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~----~~~~~~~~~----- 247 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMV----GRGSLSPDL----- 247 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHH----HHTSCCCCT-----
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHh----cccccCcch-----
Confidence 334567999999999987 6678999999999999999999999985432211 111111 111111100
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..........+.+++..||+.||++||++.+++++|+...
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 0112233467889999999999999999999999998763
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=294.81 Aligned_cols=246 Identities=21% Similarity=0.306 Sum_probs=173.6
Q ss_pred cCcceeeeeccccceeEEeeee-----cCCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~ 596 (823)
+.|++.++||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++.+++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 5588999999999999999984 35789999999754 334567899999999999999999999999876 678
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++||||+++|+|.+++..... .+.+.....+ +.||..+.++.+||+|||+++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 999999999999999843221 1333333222 2344457888999999999998754
Q ss_pred Cccc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---ccccc
Q 003402 655 DELQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---RAHEL 730 (823)
Q Consensus 655 ~~~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---~~~~l 730 (823)
.... .......||..|+|||.+.+..++.++||||||+++|||++|+.|+..... ............. .....
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA---LFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH---HHHHHHCSCCGGGHHHHHHHH
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh---HHhhccCCcccccCHHHHHHH
Confidence 4321 223346789999999999999999999999999999999999987431100 0000000000000 00000
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+........+......+.+++..||+.||++|||+.+++++|+..
T Consensus 256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 000111122333456788999999999999999999999999865
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=299.99 Aligned_cols=229 Identities=22% Similarity=0.283 Sum_probs=165.7
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcC--CCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQ--HRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~--H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+.|++.++||+|+||.||++...+++.||||++... .....+.|.+|+.++.+++ |||||++++++...+..+|||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 469999999999999999999888999999998643 3445678999999999996 599999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
| +.+++|.+++.... .+.+..+..++ .||+. .++.+||+|||+++.+......
T Consensus 136 E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll-~~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE-SSSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE-ECCeEEEEecCccccccCCCcc
Confidence 9 57889999886432 23332222222 23333 3578999999999977544333
Q ss_pred cccccccccccccccccccC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc
Q 003402 659 GNTKRIVGTYGYMSPEYALE-----------GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~-----------~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 727 (823)
......+||+.|||||++.+ ..++.++|||||||+||||++|+.|+...... .......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----~~~~~~~------ 280 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----ISKLHAI------ 280 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HHHHHHH------
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH----HHHHHHH------
Confidence 33345689999999999865 46899999999999999999999998533211 1111111
Q ss_pred ccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+++......+......+.+++..||+.||++||++.||++.
T Consensus 281 ---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 281 ---IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---hCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11111111111223467889999999999999999999875
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-32 Score=307.43 Aligned_cols=244 Identities=20% Similarity=0.242 Sum_probs=177.8
Q ss_pred cHHHHHHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCceeeEEeEEE
Q 003402 516 SFASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG---QGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591 (823)
Q Consensus 516 ~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~ 591 (823)
.+.++....++|++.++||+|+||+||+|+... ++.||||++++... ...+.+.+|+.++..++|||||++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 345556667899999999999999999999865 78999999975321 12234899999999999999999999999
Q ss_pred eCCeEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 592 EQGEKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 592 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
+.+..+||||||++|+|..++...... |..++.||+.++.||+.+.++.+||+|||+|+.
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~ 224 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence 999999999999999999999753211 111112223334566678999999999999987
Q ss_pred cCCCcccccccccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
+..+... .....+||+.|||||++. ...++.++|||||||++|||++|+.||..... ........ ....
T Consensus 225 ~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~--~~~~~~i~---~~~~ 298 (437)
T 4aw2_A 225 LMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIM---NHKE 298 (437)
T ss_dssp CCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHH---THHH
T ss_pred cccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh--hHHHHhhh---hccc
Confidence 7544322 223468999999999987 56799999999999999999999999853221 11111110 0000
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCC--CCCHHHHHHH
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAED--RPTMSDVVSM 771 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~ 771 (823)
.+.-+ .........+.+++..|++.+|++ ||++.|+++.
T Consensus 299 --~~~~p----~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 299 --RFQFP----TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --HCCCC----SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --cccCC----cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00000 001123456778889999888888 9999999875
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=284.70 Aligned_cols=245 Identities=22% Similarity=0.256 Sum_probs=169.7
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhc--CCCceeeEEeEEEeC----CeE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL--QHRNLVRLLGCCIEQ----GEK 596 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l--~H~Niv~l~g~~~~~----~~~ 596 (823)
..++|++.++||+|+||.||+|+.. ++.||||++... ....+..|.+++..+ +||||+++++++.+. ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 4467999999999999999999885 899999998643 234455566666554 999999999999987 789
Q ss_pred EEEEEcccCCCchhhccCCCcc------------------ccc--------CHHHHHHHHhccccccCCCceeceeecee
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK------------------HLL--------GWQLRVRIIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~------------------~~l--------~~~~r~~i~~~ia~d~~~~~KI~DFGla~ 650 (823)
++||||+++|+|.+++...... |.. ++.|++..+.||..+.++.+||+|||+++
T Consensus 111 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 9999999999999998543211 111 22333334445555788899999999998
Q ss_pred ecCCCcccc--ccccccccccccccccccCCCCCch------hhHHHHHHHHHHHHhCC----------CCCCCCCCCcc
Q 003402 651 MFGGDELQG--NTKRIVGTYGYMSPEYALEGVFSVK------SDVFSFGVLMLEILSSK----------KNTGVYNTDSF 712 (823)
Q Consensus 651 ~~~~~~~~~--~~~~~~Gt~~YmAPE~~~~~~~s~k------sDVwSfGvvl~Elltg~----------~p~~~~~~~~~ 712 (823)
.+....... ......||+.|||||.+.+...+.+ +|||||||++|||++|. .|+........
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~ 270 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP 270 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence 765433221 1234579999999999987776654 99999999999999994 44432222111
Q ss_pred chhHHHHhhccCCccccccCccccc-CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 713 NLLGHAWSLCKNDRAHELMDPVLQN-EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 713 ~l~~~~~~~~~~~~~~~l~d~~l~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..... ........ ..+.... .........+.+++..||+.||++|||+.+|++.|+...
T Consensus 271 ~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 330 (337)
T 3mdy_A 271 SYEDM-REIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330 (337)
T ss_dssp CHHHH-HHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhhh-HHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence 11111 11111111 1111111 112256778999999999999999999999999998764
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=286.89 Aligned_cols=227 Identities=18% Similarity=0.233 Sum_probs=164.0
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--------------------------hhHHHHHHHHHHHH
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--------------------------QGLKEFKNEMMLIA 576 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--------------------------~~~~~f~~Ev~~l~ 576 (823)
.++|++.++||+|+||.||+|+.. +++.||||.+..... ...+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367999999999999999999875 488999999865321 12356899999999
Q ss_pred hcCCCceeeEEeEEEe--CCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------Hhc
Q 003402 577 KLQHRNLVRLLGCCIE--QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDG 632 (823)
Q Consensus 577 ~l~H~Niv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ 632 (823)
+++||||+++++++.+ .+..++||||+++++|.+++... .+.+.....+ +.|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N 167 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN 167 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence 9999999999999987 57899999999999998876432 2333332222 234
Q ss_pred cccccCCCceeceeeceeecCCCccccccccccccccccccccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003402 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV---FSVKSDVFSFGVLMLEILSSKKNTGVYNT 709 (823)
Q Consensus 633 ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~---~s~ksDVwSfGvvl~Elltg~~p~~~~~~ 709 (823)
|..+.++.+||+|||+++.+..... ......||+.|||||.+.+.. ++.++|||||||++|||++|+.|+.....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 4457888999999999998754322 123467999999999998765 47899999999999999999999853211
Q ss_pred CccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 710 DSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 710 ~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+.. .. ..... .. .........+.+++..||+.||++||++.|+++
T Consensus 246 --~~~~~---~~-~~~~~-~~-------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 --MCLHS---KI-KSQAL-EF-------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp --HHHHH---HH-HHCCC-CC-------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --HHHHH---HH-hcccC-CC-------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 11111 11 00000 00 001123356788999999999999999999875
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=290.86 Aligned_cols=241 Identities=24% Similarity=0.362 Sum_probs=180.1
Q ss_pred HHHhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ 593 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~ 593 (823)
....++|.+.+.||+|+||.||+|+.. .++.||||.+.... ....++|.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 445678999999999999999999764 36789999997543 34456799999999999999999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCCc-------ccccCHHHHHHHH----------------------hccccccCCCceec
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTK-------KHLLGWQLRVRII----------------------DGIAQDQHMNPKIS 644 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~ 644 (823)
+..++||||+++|+|.+++..... ...+.+.....++ .||..+.++.+||+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEEC
Confidence 999999999999999999854211 0122333332222 34444788899999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhcc
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
|||+++...............||+.|+|||.+.+..++.++||||||+++|||++ |+.|+..... ...... ..
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~----~~ 254 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVLRF----VM 254 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--HHHHHH----HH
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--HHHHHH----HH
Confidence 9999987654433333344578999999999999999999999999999999999 7777643221 111111 11
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.+... ..+......+.+++..||+.||++||++.|+++.|+...
T Consensus 255 ~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 255 EGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred cCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 11111 111223456788999999999999999999999998863
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-32 Score=288.95 Aligned_cols=236 Identities=25% Similarity=0.389 Sum_probs=179.8
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
..++|++.++||+|+||.||+|+... ++.||||.+... ....+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 45779999999999999999999865 789999999754 3456789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|.+++..... ..+.+.....++ .||..+.++.+||+|||+++....... .
T Consensus 90 ~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~ 167 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 167 (288)
T ss_dssp CCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-E
T ss_pred cCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-c
Confidence 9999999999864322 123333333222 334447788999999999987654432 2
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......||+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... ...... ... ....
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~----~~~---------~~~~ 232 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELL----EKD---------YRME 232 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH----HTT---------CCCC
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH----hcc---------CCCC
Confidence 2233567889999999999999999999999999999999 88887533221 111111 110 0111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.+......+.+++..||+.||++||++.+++++|+...
T Consensus 233 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 12233457888999999999999999999999997753
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=303.28 Aligned_cols=232 Identities=20% Similarity=0.259 Sum_probs=170.5
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
..++|++.++||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++++++|||||++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3467999999999999999999864 58999999997543 33456799999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccc---cCCCceeceeeceeecCC
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQD---QHMNPKISDFGMARMFGG 654 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d---~~~~~KI~DFGla~~~~~ 654 (823)
|||+++|+|.+++..... +....... .+.||+.+ .++.+||+|||+|+....
T Consensus 89 ~E~~~gg~L~~~i~~~~~---~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 999999999888854322 22222222 22334434 457899999999987654
Q ss_pred CccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
... ......||+.|||||++.+..++.++|||||||++|||++|+.|+.... ...+.... ..+.. ....+
T Consensus 166 ~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~~i----~~~~~-~~~~~- 235 (444)
T 3soa_A 166 EQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQI----KAGAY-DFPSP- 235 (444)
T ss_dssp TCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHH----HHTCC-CCCTT-
T ss_pred CCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHHHH----HhCCC-CCCcc-
Confidence 322 2234689999999999999999999999999999999999999984322 11111111 11100 00000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........+.+++..||+.||++|||+.|+++.
T Consensus 236 ----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 ----EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 011234567889999999999999999999874
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-32 Score=287.89 Aligned_cols=237 Identities=29% Similarity=0.403 Sum_probs=177.4
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|++.+.||+|+||.||+|+..+++.||||.+.... ...+.|.+|++++++++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 46799999999999999999998888899999997543 34678999999999999999999999986 45689999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++..... ..+.+.....++ .||..+.++.+||+|||+++........ ..
T Consensus 90 ~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~ 167 (279)
T 1qpc_A 90 ENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AR 167 (279)
T ss_dssp TTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-CC
T ss_pred CCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc-cc
Confidence 99999999864211 123333333322 2344478889999999999987544322 22
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....||+.|+|||.+.+..++.++||||||+++|||++ |+.|+..... ..+... . ..+. ....+
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~---~-~~~~---------~~~~~ 232 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQN---L-ERGY---------RMVRP 232 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH---H-HTTC---------CCCCC
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHHHHH---H-hccc---------CCCCc
Confidence 33567889999999998899999999999999999999 8888743221 111111 1 1110 00111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
......+.+++..||+.||++||++.+++++|+......
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 223457888999999999999999999999998865433
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=295.95 Aligned_cols=231 Identities=21% Similarity=0.259 Sum_probs=174.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.+.|++.++||+|+||.||+|... +++.||+|.+..........+.+|+.++.+++|||||++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 367999999999999999999875 5889999999876555567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccc--cCCCceeceeeceeecCCCccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQD--QHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d--~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+++|+|.+++..... .+.+.....++ .||+.+ ..+.+||+|||+++.+..+..
T Consensus 130 ~~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~- 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI- 206 (387)
T ss_dssp CCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC-
T ss_pred CCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc-
Confidence 999999999865321 23333332222 233333 456799999999998754432
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.....||+.|||||++.+..++.++|||||||++|||++|+.|+..... ......... .. . . .+ ..
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~---~~-~-~-~~----~~ 272 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKR---CD-W-E-FD----ED 272 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHH---CC-C-C-CC----SS
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHh---CC-C-C-CC----cc
Confidence 2335799999999999999999999999999999999999999853221 111111111 00 0 0 00 11
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........+.+++..||+.||++|||+.|+++.
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 112234567889999999999999999999875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=285.57 Aligned_cols=233 Identities=21% Similarity=0.306 Sum_probs=162.9
Q ss_pred hcCcceeeeeccccceeEEeeeecC----CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|++.+.||+|+||.||+|+... +..||||.+... .....+.|.+|+.++++++||||+++++++ ..+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence 3679999999999999999998743 457999998754 334457899999999999999999999997 4567889
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++|+|.+++..... .+.+.....+ +.||..+.++.+||+|||+++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999999999864321 2333333222 234444778899999999998765432
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.. ......+|+.|+|||.+....++.++||||||+++|||++ |+.|+...... ...... ..+..
T Consensus 171 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i----~~~~~-------- 235 (281)
T 1mp8_A 171 YY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI----ENGER-------- 235 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH----HTTCC--------
T ss_pred cc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHH----HcCCC--------
Confidence 21 2233567889999999999999999999999999999997 88887543221 111111 11100
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+......+.+++..||+.||++||++.+|+++|+..
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 236 -LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011223345678899999999999999999999999865
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=294.98 Aligned_cols=230 Identities=20% Similarity=0.273 Sum_probs=170.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.++|++.++||+|+||.||+|... +++.||||.+... .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999875 4899999999754 3344577999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHH----------------------Hhcccccc---CCCceeceeeceeecCCC
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQ---HMNPKISDFGMARMFGGD 655 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~---~~~~KI~DFGla~~~~~~ 655 (823)
||+++|+|.+++..... +.......+ +.||..+. +..+||+|||+++.....
T Consensus 108 e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 108 DLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CCCCSCBHHHHHTTCSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred ecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 99999999988864322 222222222 22333333 356999999999876533
Q ss_pred ccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
. ......||+.|||||++.+..++.++|||||||++|||++|+.||..... ..+.... ..+.. ....+.
T Consensus 185 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i----~~~~~-~~~~~~- 253 (362)
T 2bdw_A 185 E---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQI----KAGAY-DYPSPE- 253 (362)
T ss_dssp C---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HHTCC-CCCTTG-
T ss_pred c---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----HhCCC-CCCccc-
Confidence 2 22346899999999999999999999999999999999999999753221 1111111 11100 000000
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++..||+.||++||++.|+++.
T Consensus 254 ----~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 ----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ----ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01234567889999999999999999999764
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=296.77 Aligned_cols=250 Identities=13% Similarity=0.170 Sum_probs=176.2
Q ss_pred HhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCChhhH-----------HHHHHHHHHHHhcCCCceee
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGL-----------KEFKNEMMLIAKLQHRNLVR 585 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~~~~~-----------~~f~~Ev~~l~~l~H~Niv~ 585 (823)
..++|++.++||+|+||.||+|++.. ++.||||.+........ ..+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34679999999999999999998754 47899999875432211 23445666778889999999
Q ss_pred EEeEEEeC----CeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccc--c
Q 003402 586 LLGCCIEQ----GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQD--Q 637 (823)
Q Consensus 586 l~g~~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d--~ 637 (823)
+++++.+. ...+|||||+ +++|.+++.... ..+.+..+..++ .||+.+ .
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence 99999875 5589999999 999999986532 224444443333 344446 7
Q ss_pred CCCceeceeeceeecCCCccc-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 003402 638 HMNPKISDFGMARMFGGDELQ-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF 712 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~ 712 (823)
++.+||+|||+++.+...... .......||+.|||||.+.+..++.++|||||||++|||++|+.||.....+.
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~- 268 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP- 268 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-
Confidence 889999999999887543221 11234569999999999999999999999999999999999999986432221
Q ss_pred chhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCC
Q 003402 713 NLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780 (823)
Q Consensus 713 ~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~ 780 (823)
.......... .....+++++.+.. ......+.+++..||+.||++||++.+|+++|+..+....
T Consensus 269 ~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 269 KYVRDSKIRY-RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHH-HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHh-hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 1111111111 11222333332211 1224567889999999999999999999999987654443
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=285.61 Aligned_cols=245 Identities=24% Similarity=0.353 Sum_probs=181.5
Q ss_pred HHHHHHHhcCcceeeeeccccceeEEeeee------cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEe
Q 003402 517 FASVTAATENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLG 588 (823)
Q Consensus 517 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~------~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g 588 (823)
........++|++.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++.++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344455668899999999999999999974 246789999997643 33456899999999999 7999999999
Q ss_pred EEEeCC-eEEEEEEcccCCCchhhccCCCcc-------------cccCHHHHHHHH----------------------hc
Q 003402 589 CCIEQG-EKILIYEYMVNKSLDVFLFDPTKK-------------HLLGWQLRVRII----------------------DG 632 (823)
Q Consensus 589 ~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~-------------~~l~~~~r~~i~----------------------~~ 632 (823)
++.+.+ ..++||||+++|+|.+++...... ..+.+.....++ .|
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~N 178 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccce
Confidence 998754 589999999999999999754321 113333333222 23
Q ss_pred cccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCc
Q 003402 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDS 711 (823)
Q Consensus 633 ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~ 711 (823)
|..+.++.+||+|||+++.+.............||+.|+|||.+.+..++.++|||||||++|||++ |+.|+.......
T Consensus 179 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~ 258 (316)
T 2xir_A 179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258 (316)
T ss_dssp EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH
T ss_pred EEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH
Confidence 4447788999999999987755443333445678999999999999999999999999999999998 888875433221
Q ss_pred cchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 712 FNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 712 ~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+.... ..+.. ...+......+.+++..||+.||++||++.+|++.|+..
T Consensus 259 -~~~~~~----~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 259 -EFCRRL----KEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp -HHHHHH----HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHHh----ccCcc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111111 11100 011122345678899999999999999999999999875
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=286.02 Aligned_cols=237 Identities=24% Similarity=0.345 Sum_probs=177.2
Q ss_pred cCcceee-eeccccceeEEeeeec---CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQS-KLGEGGFGPVYKGRLL---NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~-~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|.+.+ .||+|+||.||+|+.. +++.||||.++.. .....+++.+|++++.+++||||+++++++ +.+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 5566666 9999999999999864 4778999999764 334567899999999999999999999999 56679999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++.+.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp EECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EEeCCCCCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999864322 23443333333 234446788999999999998754332
Q ss_pred -ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 658 -QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 658 -~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
........||+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... .+.... ..+..
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i----~~~~~-------- 231 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFI----EQGKR-------- 231 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHH----HTTCC--------
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHH----hcCCc--------
Confidence 122233467899999999998899999999999999999999 99997543221 111111 11110
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
...+......+.+++..||+.||++||++.+|++.|+......
T Consensus 232 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 232 -MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp -CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1122234457888999999999999999999999998875443
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-31 Score=280.86 Aligned_cols=241 Identities=20% Similarity=0.222 Sum_probs=169.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||+||+|+.. +++.||||++... .....+.+.+|+.++.+++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999875 4889999999743 23345788999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|++++.+..+..... .+....... .+.||..+.++.+||+|||+++...... .
T Consensus 82 ~~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 156 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--R 156 (292)
T ss_dssp CCSEEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--S
T ss_pred cCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--c
Confidence 998644444332211 122222222 2344555788999999999999764332 2
Q ss_pred ccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc------ccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA------HELMD 732 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~------~~l~d 732 (823)
......||+.|+|||.+.+.. ++.++|||||||++|||++|+.|+...... ................ .++.+
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH-HHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHHhCCCChhhhhhhccccc
Confidence 223467899999999998766 899999999999999999999886433221 1222222211111000 00000
Q ss_pred ---------cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 ---------PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ---------~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..............+.+++..||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000001122345567899999999999999999999874
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=282.41 Aligned_cols=241 Identities=17% Similarity=0.206 Sum_probs=177.6
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.+.||+|+||.||+|+. .+++.||||.+.... ..+.+.+|+.++.++ +|+|++++++++.+....++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 5799999999999999999986 468999999986542 235688999999999 899999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCC-----ceeceeeceeecCCC
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMN-----PKISDFGMARMFGGD 655 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~-----~KI~DFGla~~~~~~ 655 (823)
+ +++|.+++..... .+.+.....++ .||..+.++. +||+|||+++.+...
T Consensus 88 ~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 9999999864322 23444433333 2333345544 999999999987544
Q ss_pred ccc-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-ccchhHHHHhhccCCcccc
Q 003402 656 ELQ-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHAWSLCKNDRAHE 729 (823)
Q Consensus 656 ~~~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~ 729 (823)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... ..................+
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 244 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence 321 1234567999999999999999999999999999999999999998654322 1111111111000000000
Q ss_pred ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 730 l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
+ .......+.+++..||+.||++||++.+|++.|+.....+
T Consensus 245 -----~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 245 -----L----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp -----H----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----H----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 0 1122456888999999999999999999999998865433
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=289.42 Aligned_cols=241 Identities=25% Similarity=0.363 Sum_probs=178.4
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE 592 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~ 592 (823)
....++|.+.+.||+|+||.||+|+... .+.||||.+.... ....+.+.+|+.++.++ +||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3455789999999999999999998643 2479999997643 34457799999999999 89999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCCc-----------ccccCHHHHHHHH----------------------hccccccCC
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTK-----------KHLLGWQLRVRII----------------------DGIAQDQHM 639 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~-----------~~~l~~~~r~~i~----------------------~~ia~d~~~ 639 (823)
.+..++||||+++|+|.+++..... ...+.+.....++ .||..+.++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGG
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCC
Confidence 9999999999999999998853211 1122333332222 344447788
Q ss_pred CceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHH
Q 003402 640 NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHA 718 (823)
Q Consensus 640 ~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~ 718 (823)
.+||+|||+++.+.............||+.|+|||.+.+..++.++|||||||++|||+| |+.|+....... .+..
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~-- 278 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYK-- 278 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHH--
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHH--
Confidence 899999999987654433333344678899999999999999999999999999999999 888875432221 1111
Q ss_pred HhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 719 WSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 719 ~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..... .....+......+.+++..||+.||.+||++.+|+++|+..
T Consensus 279 --~~~~~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 279 --LVKDG---------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp --HHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHhcC---------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 11111 00111112245678899999999999999999999999765
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-32 Score=297.24 Aligned_cols=230 Identities=21% Similarity=0.279 Sum_probs=168.5
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~ 597 (823)
..++|++.++||+|+||+||+++.. +++.||||++++. .....+.+.+|..++..+ +|||||++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4478999999999999999999875 4899999999753 223456788999999988 7999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+||||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+|+......
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~-- 178 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG-- 178 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC--
Confidence 999999999999888542211 11122223333456666889999999999998643222
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......+||+.|||||++.+..++.++|||||||++|||++|+.||..... ..+... .... . ..
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~---i~~~-~----------~~ 242 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEA---ILND-E----------VV 242 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH---HHHC-C----------CC
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--HHHHHH---HHcC-C----------CC
Confidence 223457899999999999988999999999999999999999999853321 111111 1110 0 01
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCH------HHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTM------SDVVS 770 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~------~evl~ 770 (823)
.+......+.+++..||+.||++||++ .|+++
T Consensus 243 ~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 122234567889999999999999998 77765
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=289.44 Aligned_cols=223 Identities=23% Similarity=0.267 Sum_probs=163.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||+||+|+.. +++.||||++... ......++..|+..+.++ +|||||+++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999986 5899999998653 233344566677666665 9999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+ +++|.+++.... ..+.+..+..++ .||+.+.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred ecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC--
Confidence 999 678888875432 224454444333 34445788899999999998765432
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......||++|+|||++.+ .++.++|||||||++|||++|+.++... ..+.....+. ..+..
T Consensus 212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~---------~~~~~~~~~~----~~~~~--- 273 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG---------EGWQQLRQGY----LPPEF--- 273 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH---------HHHHHHTTTC----CCHHH---
T ss_pred -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc---------cHHHHHhccC----CCccc---
Confidence 2234579999999998875 7999999999999999999997765311 0011111111 11111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++..||+.||++|||+.|++++
T Consensus 274 -~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 274 -TAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 11234568889999999999999999999874
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-32 Score=294.67 Aligned_cols=234 Identities=23% Similarity=0.369 Sum_probs=166.8
Q ss_pred cCcceeeeeccccceeEEeeeecC-Cc----EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.++||+|+||.||+|+... ++ .||+|.+... .....+++.+|+.++.+++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 679999999999999999998643 44 4688887643 3445688999999999999999999999998765 789
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+||+++|+|.+++..... .+.+..... .+.||..+.++.+||+|||+++.+....
T Consensus 94 v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999864322 123322222 2334555788899999999999875544
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.........||+.|+|||.+.+..++.++|||||||++|||++ |+.|+...... .+.... ..+.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~----~~~~--------- 236 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSIL----EKGE--------- 236 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH----HTTC---------
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHH----HcCC---------
Confidence 3333344567889999999999999999999999999999999 99988543222 111111 1110
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
....+......+.+++..||+.||++||++.|+++.|+...
T Consensus 237 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 237 RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11112223456888999999999999999999999998764
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=283.68 Aligned_cols=233 Identities=26% Similarity=0.375 Sum_probs=176.6
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|++.+.||+|+||.||+|+..+++.||||.+.... ...+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 36789999999999999999999888899999997643 34478999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++....... ...
T Consensus 86 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSS 162 (267)
T ss_dssp TTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HST
T ss_pred CCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccc-ccc
Confidence 99999999864321 23333333222 234447788999999999987643321 122
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
....||+.|+|||.+.+..++.++||||||+++|||++ |+.|+..... ..... .. ..+. ....+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~---~i-~~~~---------~~~~~ 227 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVE---DI-STGF---------RLYKP 227 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHH---HH-HTTC---------CCCCC
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHH---HH-hcCC---------cCCCC
Confidence 23567889999999998999999999999999999999 7888753221 11111 11 1110 00111
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
......+.+++..||+.||++||++.+++++|+..
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 12345678899999999999999999999999865
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=295.54 Aligned_cols=230 Identities=18% Similarity=0.289 Sum_probs=168.2
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|++.++||+|+||+||+++... ++.||||++++.. ....+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 4679999999999999999998764 7899999997542 22334688999999887 89999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+|+...... .
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~--~ 208 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--D 208 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--C
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC--C
Confidence 99999999999888542211 11112222333456666899999999999998632221 2
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc---cchhHHHHhhccCCccccccCcccc
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS---FNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~---~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
.....+||+.|||||++.+..++.++|||||||++|||++|+.||....... ...............
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---------- 278 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---------- 278 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC----------
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc----------
Confidence 3445789999999999999999999999999999999999999985432210 011111111111100
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
...+......+.+++..||+.||++||++
T Consensus 279 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 01222344567889999999999999996
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=283.81 Aligned_cols=229 Identities=21% Similarity=0.336 Sum_probs=171.0
Q ss_pred hcCcceeeeeccccceeEEeeeecC-C-------cEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-G-------QEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~-------~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
.++|.+.+.||+|+||.||+|+... + ..||+|.+........+.|.+|+.++.+++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3678999999999999999998654 3 4799999987666677889999999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCC--------ceece
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMN--------PKISD 645 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~--------~KI~D 645 (823)
.++||||+++|+|.+++..... .+.+..+..++ .||..+.++. +||+|
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred CEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999865322 13333333322 2333355555 99999
Q ss_pred eeceeecCCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
||+++.... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+....... ... ......
T Consensus 165 fg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~~---~~~~~~ 234 (289)
T 4fvq_A 165 PGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RKL---QFYEDR 234 (289)
T ss_dssp CCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHH---HHHHTT
T ss_pred CcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HHH---HHhhcc
Confidence 999975432 223568999999999987 679999999999999999999765543221111 000 000000
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.. .+......+.+++..||+.||++|||+.++++.|+...
T Consensus 235 ~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 235 HQ------------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp CC------------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred CC------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 00 11111234678999999999999999999999998764
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=293.76 Aligned_cols=232 Identities=19% Similarity=0.252 Sum_probs=168.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-----GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-----~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
+.|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++.+++|||||++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56999999999999999999875 58999999986321 1245789999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCc-ccccCHHHHH----HH------------------HhccccccC---CCceeceeeceeec
Q 003402 599 IYEYMVNKSLDVFLFDPTK-KHLLGWQLRV----RI------------------IDGIAQDQH---MNPKISDFGMARMF 652 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~-~~~l~~~~r~----~i------------------~~~ia~d~~---~~~KI~DFGla~~~ 652 (823)
||||+++|+|.+++..... ...+...... ++ +.||..+.+ ..+||+|||+++.+
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999999877743211 1112222222 22 223333433 34999999999987
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
..... ......||+.|||||++.+..++.++|||||||++|||++|+.|+.... ..+.... ..+.. ..+
T Consensus 184 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~i----~~~~~--~~~ 252 (351)
T 3c0i_A 184 GESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---ERLFEGI----IKGKY--KMN 252 (351)
T ss_dssp CTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---HHHHHHH----HHTCC--CCC
T ss_pred cCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---HHHHHHH----HcCCC--CCC
Confidence 54332 2234679999999999999999999999999999999999999985321 1111110 00000 000
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+... ......+.+++..||+.||++|||+.|+++.
T Consensus 253 ~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 253 PRQW----SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 1123567889999999999999999999863
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=295.60 Aligned_cols=227 Identities=23% Similarity=0.253 Sum_probs=165.0
Q ss_pred ceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccCC
Q 003402 528 SIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNK 606 (823)
Q Consensus 528 ~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~g 606 (823)
...+.||+|+||.||+|+.. +++.||||.++.......++|.+|+.++.+++|||||++++++.+.+..+|||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 33578999999999999875 58999999998766666788999999999999999999999999999999999999999
Q ss_pred CchhhccCCCcccccCHHHHHHHH----------------------hcccc--ccCCCceeceeeceeecCCCccccccc
Q 003402 607 SLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQ--DQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 607 sL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~--d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|.+++.... ..+.+.....++ .||+. +.++.+||+|||+++.+..... ..
T Consensus 172 ~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~ 246 (373)
T 2x4f_A 172 ELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LK 246 (373)
T ss_dssp EEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CC
T ss_pred cHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cc
Confidence 9988885422 123333332222 23333 4567899999999998754332 22
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
...||+.|||||++....++.++|||||||++|||++|+.|+..... ...+.... ... ....+.. ...
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~---~~~--~~~~~~~-----~~~ 314 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--AETLNNIL---ACR--WDLEDEE-----FQD 314 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHH---HTC--CCSCSGG-----GTT
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH---hcc--CCCChhh-----hcc
Confidence 35799999999999999999999999999999999999999853321 11111111 100 0000000 012
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....+.+++..||+.||++||++.|+++.
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 24567889999999999999999999874
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-32 Score=291.96 Aligned_cols=236 Identities=21% Similarity=0.265 Sum_probs=162.8
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC----eE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG----EK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~----~~ 596 (823)
++|++.++||+|+||.||+++. .+++.||||++... .....+.|.+|+.++.+++||||+++++++.... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 6799999999999999999986 45889999999754 2334567999999999999999999999987654 34
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++||||+++++|.+++.... .+.+..... .+.||..+.++.+||+|||+++.+..
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 99999999999999985422 122222222 22345557888999999999987654
Q ss_pred Ccc-ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 655 DEL-QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 655 ~~~-~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... ........||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... ........... ..+
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-----~~~~~~~~~~~----~~~ 239 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-----SVAYQHVREDP----IPP 239 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHCCC----CCH
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhcCCC----CCc
Confidence 322 12233467999999999999999999999999999999999999998532211 11111111110 000
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH-HHhcc
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS-MINNE 775 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~-~L~~~ 775 (823)
.. ........+.+++..||+.||++||++.+++. .|...
T Consensus 240 ~~---~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 240 SA---RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HH---HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cc---ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 00 01113456788999999999999998777664 34443
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-31 Score=292.05 Aligned_cols=230 Identities=20% Similarity=0.292 Sum_probs=172.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||+++... ++.||||.+.... ....+.+.+|+.++.+++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 679999999999999999998764 7899999986432 234578999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++.+.... ..
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---~~ 171 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QI 171 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC---CB
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC---ce
Confidence 999999999998653221 01111122222345566889999999999999875432 23
Q ss_pred ccccccccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 662 KRIVGTYGYMSPEYALE---GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~---~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
....||+.|||||++.. ..++.++|||||||++|||++|+.||............ ... ... ...
T Consensus 172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~--~~~-~~~----------~~~ 238 (384)
T 4fr4_A 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV--HTF-ETT----------VVT 238 (384)
T ss_dssp CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHH--HHH-HHC----------CCC
T ss_pred eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHH--HHH-hhc----------ccC
Confidence 45789999999999874 45899999999999999999999998644332211111 000 000 011
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCC-HHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPT-MSDVVS 770 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~ 770 (823)
.+......+.+++..||+.||++||+ +.+|..
T Consensus 239 ~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 239 YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 22233457888999999999999999 677654
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=284.10 Aligned_cols=247 Identities=20% Similarity=0.237 Sum_probs=175.9
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHh--cCCCceeeEEeEEEeCC----
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK--LQHRNLVRLLGCCIEQG---- 594 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~--l~H~Niv~l~g~~~~~~---- 594 (823)
....++|.+.+.||+|+||.||+|+. +++.||||.+... ..+.+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 33456799999999999999999988 5899999999643 34678889998887 79999999999998876
Q ss_pred eEEEEEEcccCCCchhhccCCCcc------------------c--------ccCHHHHHHHHhccccccCCCceeceeec
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKK------------------H--------LLGWQLRVRIIDGIAQDQHMNPKISDFGM 648 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~------------------~--------~l~~~~r~~i~~~ia~d~~~~~KI~DFGl 648 (823)
..++||||+++|+|.+++...... | ..++.|++..+.||..+.++.+||+|||+
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred eeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 899999999999999998543211 0 11122222233344457788999999999
Q ss_pred eeecCCCccc--cccccccccccccccccccCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCCCC
Q 003402 649 ARMFGGDELQ--GNTKRIVGTYGYMSPEYALEG------VFSVKSDVFSFGVLMLEILSS----------KKNTGVYNTD 710 (823)
Q Consensus 649 a~~~~~~~~~--~~~~~~~Gt~~YmAPE~~~~~------~~s~ksDVwSfGvvl~Elltg----------~~p~~~~~~~ 710 (823)
++........ .......||+.|+|||.+.+. .++.++|||||||++|||++| +.|+......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 273 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence 9876543321 123346799999999999876 334799999999999999999 5555433222
Q ss_pred ccchhHHHHhhccCCccccccCccccc-CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 711 SFNLLGHAWSLCKNDRAHELMDPVLQN-EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 711 ~~~l~~~~~~~~~~~~~~~l~d~~l~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
........... ... ...+.+.. .........+.+++..||+.||++||++.+|+++|+...
T Consensus 274 ~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 274 DPSVEEMRKVV-CEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp SCCHHHHHHHH-TTS----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHH-HHH----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 11111111111 111 11111111 112356778999999999999999999999999998763
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=286.06 Aligned_cols=244 Identities=23% Similarity=0.363 Sum_probs=167.6
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC----CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG- 594 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~- 594 (823)
...++|.+.+.||+|+||.||+|+... ++.||||.+... .....+.|.+|+.++++++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 455789999999999999999997643 458999998743 3445678999999999999999999999998765
Q ss_pred ----eEEEEEEcccCCCchhhccCCC---cccccCHHHHHHHH----------------------hccccccCCCceece
Q 003402 595 ----EKILIYEYMVNKSLDVFLFDPT---KKHLLGWQLRVRII----------------------DGIAQDQHMNPKISD 645 (823)
Q Consensus 595 ----~~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~D 645 (823)
..++||||+++|+|..++.... ....+.+.....++ .||..+.++.+||+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECS
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEee
Confidence 3599999999999999984221 12234444333333 334447788999999
Q ss_pred eeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccC
Q 003402 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
||+++.+.............|++.|+|||.+.+..++.++||||||+++|||++ |+.|+...... .+.... ...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~---~~~ 265 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYL---LHG 265 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH---HTT
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHH---HcC
Confidence 999987754433333344568899999999999999999999999999999999 77776433221 111111 111
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCC
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~ 780 (823)
.. ...+......+.+++..||+.||++||++.+++++|+.....+|
T Consensus 266 -~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 266 -HR---------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp -CC---------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred -CC---------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 00 01112234568889999999999999999999999988754443
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-32 Score=303.68 Aligned_cols=241 Identities=19% Similarity=0.224 Sum_probs=176.6
Q ss_pred HHHHHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 003402 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ 593 (823)
Q Consensus 518 ~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~ 593 (823)
.++....++|++.++||+|+||+||+++... ++.||||++++.. ....+.+.+|+.++..++|||||++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3445566889999999999999999998764 8899999996521 12234588999999999999999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCC
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+..+|||||+++|+|.+++...... |..++.||+..+.||+.+.++.+||+|||+|+.+...
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 9999999999999999988643211 1111222233345666689999999999999987544
Q ss_pred ccccccccccccccccccccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGV----FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~----~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
... .....+||+.|||||++.... ++.++|||||||++|||++|+.||..... ...... ...... .+
T Consensus 222 ~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~---i~~~~~--~~- 292 (410)
T 3v8s_A 222 GMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSK---IMNHKN--SL- 292 (410)
T ss_dssp SEE-ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHH---HHTHHH--HC-
T ss_pred Ccc-cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--hhHHHH---HHhccc--cc-
Confidence 321 233578999999999998665 88999999999999999999999853221 111111 100000 00
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCC--CCCHHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAED--RPTMSDVVSM 771 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~ 771 (823)
.-.........+.+++..||+.+|.+ ||++.||+++
T Consensus 293 ----~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 ----TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ----CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ----cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00001123456788999999999988 9999999886
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=282.43 Aligned_cols=240 Identities=19% Similarity=0.249 Sum_probs=167.6
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||+|+..+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5789999999999999999998779999999996542 22346789999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++ +|.+++..... .+....... .+.||..+.++.+||+|||+++...... ..
T Consensus 82 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RK 156 (288)
T ss_dssp CSE-EHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cCC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--cc
Confidence 985 88888754321 122222222 2234455788999999999998764322 12
Q ss_pred cccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc------cc--ccc
Q 003402 661 TKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR------AH--ELM 731 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~------~~--~l~ 731 (823)
.....||+.|+|||.+.+. .++.++|||||||++|||++|+.|+..... ............... .. ...
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE--ADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHHCCCChhhchhhhccccc
Confidence 2335789999999999764 589999999999999999999999854321 111111111111000 00 000
Q ss_pred Ccccc-------cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 732 DPVLQ-------NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 732 d~~l~-------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++... ..........+.+++..||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11000 01112234567899999999999999999998863
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=283.01 Aligned_cols=237 Identities=16% Similarity=0.172 Sum_probs=174.1
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||+|+. .+++.||||.+..... .+++.+|+.+++++ +||||+++++++.+.+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 6799999999999999999986 4589999999875432 34688999999999 999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCC-----ceeceeeceeecCCC
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMN-----PKISDFGMARMFGGD 655 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~-----~KI~DFGla~~~~~~ 655 (823)
+ +++|.+++.... ..+.+.....++ .||+.+.++. +||+|||+++.+...
T Consensus 87 ~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 L-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp C-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred C-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9 999999986431 224444433333 2333455555 999999999976543
Q ss_pred cccc-----ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCcc-chhHHHHhhccCCcccc
Q 003402 656 ELQG-----NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF-NLLGHAWSLCKNDRAHE 729 (823)
Q Consensus 656 ~~~~-----~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~ 729 (823)
.... ......||+.|||||.+.+..++.++|||||||++|||++|+.||.....+.. ..............
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~--- 240 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP--- 240 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC---
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC---
Confidence 2211 22457899999999999999999999999999999999999999865433211 11111100000000
Q ss_pred ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 730 l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
...+.. ... .+.+++..||+.||.+||++.+|++.|+...
T Consensus 241 --~~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 241 --IEVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp --HHHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred --HHHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 000000 112 7888999999999999999999999987653
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=289.80 Aligned_cols=230 Identities=18% Similarity=0.238 Sum_probs=157.0
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
..+.|++.++||+|+||.||+|+... ++.||||.++... ..+.+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 34679999999999999999999864 7899999997542 34678899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccc---cCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQD---QHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d---~~~~~KI~DFGla~~~~~~~ 656 (823)
|+++|+|.+++..... +.+.....++ .||..+ .++.+||+|||+++......
T Consensus 129 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp CCCSCBHHHHHTTCSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred eCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 9999999998865322 3333332222 233333 37889999999998764332
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
......||+.|+|||++.+..++.++|||||||++|||++|+.|+........ .... . ..... ....
T Consensus 206 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~---i-~~~~~-~~~~---- 272 (349)
T 2w4o_A 206 ---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-MFRR---I-LNCEY-YFIS---- 272 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-HHHH---H-HTTCC-CCCT----
T ss_pred ---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-HHHH---H-HhCCC-ccCC----
Confidence 22346799999999999999999999999999999999999999854322211 1111 1 11100 0000
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.........+.+++..||+.||++|||+.|+++.
T Consensus 273 -~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 273 -PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112234567889999999999999999999874
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=289.13 Aligned_cols=240 Identities=19% Similarity=0.215 Sum_probs=159.0
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEe--------
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIE-------- 592 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~-------- 592 (823)
...+|++.++||+|+||.||+|+.. +++.||||++........+.+.+|+.++.++. ||||+++++++..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4467999999999999999999875 58999999997666666778999999999996 9999999999953
Q ss_pred CCeEEEEEEcccCCCchhhccCCCcccccCHHHHH------------------------HHHhccccccCCCceeceeec
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV------------------------RIIDGIAQDQHMNPKISDFGM 648 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~------------------------~i~~~ia~d~~~~~KI~DFGl 648 (823)
....++||||+. |+|.+++........+.+.... ..+.||..+.++.+||+|||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 345899999996 7888887532111223333322 223344457788999999999
Q ss_pred eeecCCCcccc----------ccccccccccccccccc---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchh
Q 003402 649 ARMFGGDELQG----------NTKRIVGTYGYMSPEYA---LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLL 715 (823)
Q Consensus 649 a~~~~~~~~~~----------~~~~~~Gt~~YmAPE~~---~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~ 715 (823)
++.+....... ......||+.|+|||.+ .+..++.++|||||||++|||++|+.|+......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----- 259 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----- 259 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-----
Confidence 98765432111 11235699999999998 5677899999999999999999999997432111
Q ss_pred HHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCCC
Q 003402 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781 (823)
Q Consensus 716 ~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~ 781 (823)
++++..............+.+++..||+.||++||++.|+++.|+......+.
T Consensus 260 -------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 260 -------------RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp -------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred -------------HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 01111111111111223467899999999999999999999999876544433
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=290.91 Aligned_cols=224 Identities=19% Similarity=0.273 Sum_probs=169.0
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 6799999999999999999987 458999999986431 223457899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+ +|+|.+++..... +.+..... .+.||..+.++.+||+|||+++......
T Consensus 89 E~~-~g~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKR---MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162 (336)
T ss_dssp CCC-CEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--
T ss_pred ECC-CCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--
Confidence 999 6888887753221 22222222 2345555788999999999998765432
Q ss_pred cccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.....+||+.|+|||.+.+..+ +.++|||||||++|||++|+.||........ ...+.... .
T Consensus 163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--------------~~~i~~~~--~ 225 (336)
T 3h4j_B 163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--------------FKKVNSCV--Y 225 (336)
T ss_dssp -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--------------BCCCCSSC--C
T ss_pred -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--------------HHHHHcCC--C
Confidence 2234679999999999988876 7899999999999999999999853221100 00000000 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++..||+.||.+|||+.|+++.
T Consensus 226 ~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 1122234567889999999999999999999875
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=281.26 Aligned_cols=228 Identities=20% Similarity=0.320 Sum_probs=170.9
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ--GEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~--~~~~lV~ 600 (823)
++|++.++||+|+||.||+|+.. ++.||||.+... .....++|.+|+.++.+++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57889999999999999999984 889999999754 334557899999999999999999999999887 7889999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHH------------------------HhccccccCCCceeceeeceeecCCCc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRI------------------------IDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i------------------------~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||+++|+|.+++..... ..+.+.....+ +.||..+.++.+||+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-- 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred cccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence 99999999999975432 12333333222 2334446778889998888764322
Q ss_pred cccccccccccccccccccccCCCCCc---hhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSV---KSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~---ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
....||+.|+|||.+.+..++. ++|||||||++|||++|+.|+...... ...........
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~------- 228 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-----EIGMKVALEGL------- 228 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-----HHHHHHHHSCC-------
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-----HHHHHHHhcCC-------
Confidence 2357899999999998765544 899999999999999999998533211 11111111111
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+......+.+++..||+.||++|||+.++++.|+..
T Consensus 229 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 229 --RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 1112223345688899999999999999999999999875
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=297.45 Aligned_cols=237 Identities=27% Similarity=0.394 Sum_probs=163.0
Q ss_pred CcceeeeeccccceeEEeeeecC--C--cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCeEEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN--G--QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE-QGEKILI 599 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~--~--~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-~~~~~lV 599 (823)
.|.+.++||+|+||.||+|++.+ + ..||||.++.. .....++|.+|+.++++++|||||+++++|.+ .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 46778999999999999998643 2 46899999754 33456789999999999999999999999865 4678999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHH----H------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVR----I------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----i------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++|+|.+++..... .+.+..... + +.||..+.++.+||+|||+++.+.....
T Consensus 170 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999965332 122222222 2 2344457889999999999987644322
Q ss_pred c--cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 658 Q--GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 658 ~--~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
. .......||+.|||||.+.+..++.++|||||||++|||++ |.+|+...... ...... ..+. ..
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~----~~~~--~~---- 315 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL----LQGR--RL---- 315 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHH----HTTC--CC----
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHH----HcCC--CC----
Confidence 1 12233567889999999999999999999999999999999 55555432221 111111 1110 00
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
..+......+.+++..||+.||++||++.+|++.|+.....+
T Consensus 316 ---~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 316 ---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111223456888999999999999999999999998875443
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=287.73 Aligned_cols=226 Identities=23% Similarity=0.297 Sum_probs=172.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+++.. +++.||||.+++.. ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 67999999999999999999875 58999999997532 234567889999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|.+++...... |..++.||+..+.||..+.++.+||+|||+++..... .
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-----~ 160 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----T 160 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----B
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc-----c
Confidence 999999999998643211 1111112222234555688999999999999976432 2
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...+||+.|||||++.+..++.++|||||||++|||++|+.|+..... .... ...... . + ..+.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~---~~i~~~-~--------~--~~p~ 224 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTY---EKILNA-E--------L--RFPP 224 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHH---HHHHHC-C--------C--CCCT
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHH---HHHHhC-C--------C--CCCC
Confidence 346899999999999999999999999999999999999999853221 1111 111111 0 0 1122
Q ss_pred HHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
.....+.+++..|++.||++|| ++.+|++.
T Consensus 225 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 225 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 2345678899999999999999 88998763
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=299.05 Aligned_cols=225 Identities=21% Similarity=0.358 Sum_probs=172.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 67999999999999999999876 58999999996532 233567999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++|+|.+++..... +..... +..+.||..+.++.+||+|||+++.......
T Consensus 96 E~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~- 171 (476)
T 2y94_A 96 EYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF- 171 (476)
T ss_dssp ECCSSEEHHHHTTSSSS---CCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC-
T ss_pred eCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccccc-
Confidence 99999999999865322 233222 2223445557889999999999998754322
Q ss_pred cccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
....+||+.|+|||++.+..+ +.++|||||||++|||++|+.|+...... .+.. ... .+. .
T Consensus 172 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~---~i~-~~~--------~-- 233 (476)
T 2y94_A 172 --LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFK---KIC-DGI--------F-- 233 (476)
T ss_dssp --BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHH---HHH-TTC--------C--
T ss_pred --ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHH---HHh-cCC--------c--
Confidence 234689999999999998876 78999999999999999999998533211 1111 111 110 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++..||+.||++|||+.|+++.
T Consensus 234 ~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0111223467889999999999999999999874
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-31 Score=284.11 Aligned_cols=241 Identities=18% Similarity=0.191 Sum_probs=173.5
Q ss_pred HHhcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCeE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEK 596 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~----~~~~ 596 (823)
...++|++.++||+|+||.||+++. .+++.||||++........+.+.+|+.++++++||||+++++++.. ....
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 3457899999999999999999987 4689999999976666667889999999999999999999999973 3478
Q ss_pred EEEEEcccCCCchhhccCCC-cccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecC
Q 003402 597 ILIYEYMVNKSLDVFLFDPT-KKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
++||||+++|+|.+++.... ....+.+.....++ .||..+.++.+||+|||+++...
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 99999999999999886421 11223443333332 23444788899999999998653
Q ss_pred CCccc-------cccccccccccccccccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc
Q 003402 654 GDELQ-------GNTKRIVGTYGYMSPEYALEGV---FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 654 ~~~~~-------~~~~~~~Gt~~YmAPE~~~~~~---~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
..... .......||+.|+|||.+.... ++.++|||||||++|||++|+.|+.........+.... .
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~ 261 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV----Q 261 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH----H
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh----h
Confidence 21110 0112356899999999987654 78999999999999999999999742111110111000 0
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
. .............+.+++..||+.||.+||++.+|++.|+..
T Consensus 262 ~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 262 N---------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp C---------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred c---------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 0 000111122345688899999999999999999999999876
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=284.54 Aligned_cols=238 Identities=24% Similarity=0.305 Sum_probs=173.9
Q ss_pred CcceeeeeccccceeEEeeeecC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE-EEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK-ILI 599 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~-~lV 599 (823)
.|.+.++||+|+||.||+|+..+ +..||||.+.... ....+.|.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 35667999999999999998643 2379999997543 34567899999999999999999999999876655 999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+.+|+|.+++..... .+.+.....+ +.||..+.++.+||+|||+++.+.....
T Consensus 102 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp ECCCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred EecccCCCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999999975322 2233322222 2344457888999999999987654332
Q ss_pred --ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 658 --QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 658 --~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
........||+.|+|||.+.+..++.++||||||+++|||++|+.|+..... ...+...... ..
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~----~~--------- 245 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQ----GR--------- 245 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHT----TC---------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhc----CC---------
Confidence 1223346789999999999999999999999999999999997766432211 1111111111 00
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
....+......+.+++..||+.||++|||+.+++++|+.....+
T Consensus 246 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 00111223456888999999999999999999999998865443
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=278.10 Aligned_cols=232 Identities=22% Similarity=0.274 Sum_probs=174.0
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 367999999999999999999876 58999999986432 3445789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|.+++.... .+.......++ .||..+.++.+||+|||+++.+.......
T Consensus 86 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 86 YCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp CCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred ecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999999999986432 23333222222 23444778899999999998764333233
Q ss_pred ccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.|+.........+..+ .... ....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~--~~~~------ 229 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKK--TYLN------ 229 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH-----HTTC--TTST------
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh-----hhcc--cccC------
Confidence 3345689999999999988775 789999999999999999999986543322211111 1100 0000
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........+.+++..||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 011234467789999999999999999998763
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=283.69 Aligned_cols=242 Identities=14% Similarity=0.147 Sum_probs=168.0
Q ss_pred cCcceeeeeccccceeEEeeeec----CCcEEEEEEeccCChh-----------hHHHHHHHHHHHHhcCCCceeeEEeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQSGQ-----------GLKEFKNEMMLIAKLQHRNLVRLLGC 589 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~~~~-----------~~~~f~~Ev~~l~~l~H~Niv~l~g~ 589 (823)
++|.+.++||+|+||.||+|+.. .+..||||.+...... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 67999999999999999999875 4678999998754321 11346788899999999999999999
Q ss_pred EEe----CCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCC--Cc
Q 003402 590 CIE----QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHM--NP 641 (823)
Q Consensus 590 ~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~--~~ 641 (823)
+.+ ....++||||+ +++|.+++.... .+.+.....++. ||..+.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcE
Confidence 988 78899999999 999999986532 344444433332 33335555 99
Q ss_pred eeceeeceeecCCCccc-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhH
Q 003402 642 KISDFGMARMFGGDELQ-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 642 KI~DFGla~~~~~~~~~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~ 716 (823)
||+|||+++.+...... .......||+.|||||.+.+..++.++|||||||++|||++|+.|+............
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999887433211 1123468999999999999999999999999999999999999998532222111111
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...... . .....+.... ........+.+++..||+.||++||++.+|+++|+..
T Consensus 273 ~~~~~~-~-~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 273 AKTNLL-D-ELPQSVLKWA---PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHH-H-TTTHHHHHHS---CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHhhc-c-cccHHHHhhc---cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 111110 0 0000000000 0112345688899999999999999999999999876
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=285.12 Aligned_cols=241 Identities=17% Similarity=0.185 Sum_probs=168.7
Q ss_pred HHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 003402 519 SVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-----SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE 592 (823)
Q Consensus 519 ~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~ 592 (823)
++....++|++.++||+|+||.||+|+.. +++.||||.+... .....+.+.+|+.++++++|||||++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34556678999999999999999999875 4789999998643 23456789999999999999999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCCc---------------------------------ccccC----HH----HHHHHH-
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTK---------------------------------KHLLG----WQ----LRVRII- 630 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~---------------------------------~~~l~----~~----~r~~i~- 630 (823)
.+..++||||+++|+|.+++..... ..... .. ...+++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999998842000 00001 11 111222
Q ss_pred -----------------hccccccCC--CceeceeeceeecCCCcc--ccccccccccccccccccccC--CCCCchhhH
Q 003402 631 -----------------DGIAQDQHM--NPKISDFGMARMFGGDEL--QGNTKRIVGTYGYMSPEYALE--GVFSVKSDV 687 (823)
Q Consensus 631 -----------------~~ia~d~~~--~~KI~DFGla~~~~~~~~--~~~~~~~~Gt~~YmAPE~~~~--~~~s~ksDV 687 (823)
.||..+.+. .+||+|||+++.+..... ........||+.|+|||.+.+ ..++.++||
T Consensus 180 ~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 233334444 899999999987643211 112334679999999999875 678999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHH
Q 003402 688 FSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSD 767 (823)
Q Consensus 688 wSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~e 767 (823)
|||||++|||++|+.|+...... . .......... ....+. .......+.+++..||+.||++||++.+
T Consensus 260 wslG~il~el~~g~~pf~~~~~~--~---~~~~~~~~~~--~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~ 327 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVNDA--D---TISQVLNKKL--CFENPN-----YNVLSPLARDLLSNLLNRNVDERFDAMR 327 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH--H---HHHHHHHCCC--CTTSGG-----GGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCChH--H---HHHHHHhccc--ccCCcc-----cccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 99999999999999998533211 1 1111111110 000111 1113456788999999999999999999
Q ss_pred HHHH
Q 003402 768 VVSM 771 (823)
Q Consensus 768 vl~~ 771 (823)
+++.
T Consensus 328 ~l~h 331 (345)
T 3hko_A 328 ALQH 331 (345)
T ss_dssp HHHS
T ss_pred HhcC
Confidence 9874
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=289.04 Aligned_cols=236 Identities=25% Similarity=0.393 Sum_probs=169.2
Q ss_pred hcCcceeeeeccccceeEEeeeecC-----CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
.++|.+.+.||+|+||.||+|+... +..||||.+... .....++|.+|+.++.+++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3568888999999999999998753 236999999754 3344567999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||+++|+|.+++..... .+.+.....++ .||..+.++.+||+|||+++.+...
T Consensus 123 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999864321 23333333322 3344478889999999999876543
Q ss_pred ccc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 656 ELQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 656 ~~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.|+..... ..+... . ..+.
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~---~-~~~~------- 267 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKA---I-NDGF------- 267 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHH---H-HTTC-------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHH---H-HCCC-------
Confidence 211 12223457889999999999999999999999999999999 9988743221 111111 1 1110
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
....+......+.+++..||+.||++||++.+|+++|+...
T Consensus 268 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 268 --RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp --CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00112233456888999999999999999999999998764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=286.95 Aligned_cols=229 Identities=19% Similarity=0.296 Sum_probs=168.1
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.+.||+|+||.||+++... ++.||||.+.+. .....+.+.+|+.++.++ +|||||++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 579999999999999999998764 889999999754 233456788999999988 899999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 600 YEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
|||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++...... ..
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~--~~ 166 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DT 166 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT--CC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC--Cc
Confidence 9999999999888542210 11111122223345556889999999999998643221 22
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc---cchhHHHHhhccCCccccccCccccc
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS---FNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~---~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
....+||+.|||||++.+..++.++|||||||++|||++|+.||....... ............... .
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~----------~ 236 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ----------I 236 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC----------C
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC----------C
Confidence 345789999999999999999999999999999999999999985432110 000111111111110 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
..+......+.+++..||+.||++||++
T Consensus 237 ~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1222334567889999999999999996
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=278.88 Aligned_cols=239 Identities=23% Similarity=0.346 Sum_probs=165.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||.||+|+.. +++.||||++... .....+++.+|+.++++++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 57999999999999999999864 6899999999752 3345678999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCC-cccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 601 EYMVNKSLDVFLFDPT-KKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~-~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||+++++|.+++.... ....+.......++ .||..+.++.+||+|||+++.......
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999999885311 11122332222222 334447788999999999987644321
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......||+.|+|||.+.+..++.++||||||+++|||++|+.|+.........+. ... ........
T Consensus 192 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~-~~~~~~~~------- 258 (310)
T 2wqm_A 192 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC---KKI-EQCDYPPL------- 258 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH---HHH-HTTCSCCC-------
T ss_pred --cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH---HHh-hcccCCCC-------
Confidence 22345799999999999999999999999999999999999999753322211111 111 11111110
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccC
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF 777 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 777 (823)
........+.+++..||+.||++||++.+|+++|+....
T Consensus 259 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 259 -PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 011234567889999999999999999999999988643
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=293.52 Aligned_cols=231 Identities=22% Similarity=0.283 Sum_probs=171.6
Q ss_pred HHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~ 596 (823)
...++|.+.++||+|+||.||+|+.. +++.||||.+++.. ....+.+..|..++.++ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45578999999999999999999976 48899999997532 23456788999999887 999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++||||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++......
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 172 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD- 172 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-
Confidence 9999999999999988542110 11111122223345556889999999999998643222
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......+||+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+.... ... . +
T Consensus 173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i---~~~-~------~---- 235 (345)
T 1xjd_A 173 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSI---RMD-N------P---- 235 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH---HHC-C------C----
T ss_pred -CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH---HhC-C------C----
Confidence 223457899999999999999999999999999999999999999853221 1111111 000 0 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHH-HHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMS-DVVS 770 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~-evl~ 770 (823)
..+......+.+++..||+.||++||++. +|++
T Consensus 236 ~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 236 FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 11122345678899999999999999997 6654
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=292.09 Aligned_cols=246 Identities=15% Similarity=0.173 Sum_probs=172.3
Q ss_pred hcCcceeeeeccc--cceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEG--GFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G--~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|++.++||+| +||.||+|+.. +++.||||++... .....+.+.+|+.++++++|||||++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3679999999999 99999999986 5899999999754 23445778899999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|||||++|+|.+++...... .+....... .+.||+.+.++.+||+|||++.......
T Consensus 104 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMD-GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred EEEccCCCCHHHHHhhhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 99999999999998643211 123322222 2345555788999999999987653221
Q ss_pred c-----ccccccccccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc----cC-
Q 003402 657 L-----QGNTKRIVGTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC----KN- 724 (823)
Q Consensus 657 ~-----~~~~~~~~Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~----~~- 724 (823)
. ........||+.|||||++.+ ..++.++|||||||++|||++|+.|+......... ........ ..
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGTVPCLLDTS 261 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC------------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHhcCCCCcccccc
Confidence 1 112223479999999999987 67999999999999999999999998643322111 00000000 00
Q ss_pred -----------------CccccccCc---c------cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 -----------------DRAHELMDP---V------LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 -----------------~~~~~l~d~---~------l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....+.+.. . ............+.+++..||+.||++|||+.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000000 0 0001112234568889999999999999999999875
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=285.10 Aligned_cols=237 Identities=27% Similarity=0.383 Sum_probs=172.2
Q ss_pred hcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
.++|++.+.||+|+||.||+|++. +++.||||.+... ......++.+|+.++.+++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 367999999999999999999842 4678999999754 344566899999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCc----ccccCHHHHHHHHh----------------------ccccc---cCCCceeceee
Q 003402 597 ILIYEYMVNKSLDVFLFDPTK----KHLLGWQLRVRIID----------------------GIAQD---QHMNPKISDFG 647 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~----~~~l~~~~r~~i~~----------------------~ia~d---~~~~~KI~DFG 647 (823)
++||||+++++|.+++..... ...+.+.....++. ||..+ .+..+||+|||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccc
Confidence 999999999999999965321 12244444333332 23334 45569999999
Q ss_pred ceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 648 MARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 648 la~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
+++...............||+.|+|||.+.+..++.++||||||+++|||+| |+.|+..... ..+.... ..+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~----~~~~ 262 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFV----TSGG 262 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH----HTTC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHH----hcCC
Confidence 9986644433333344678999999999999999999999999999999999 8888743221 1111111 1111
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
. ...+......+.+++..||+.||++||++.+|++.|+..
T Consensus 263 ~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 263 R---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 0 011122345678899999999999999999999999865
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-31 Score=281.29 Aligned_cols=234 Identities=26% Similarity=0.331 Sum_probs=169.9
Q ss_pred HhcCcceeeeeccccceeEEeeeecC----CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
..++|.+.+.||+|+||.||+|+..+ +..||||.+... .....+.|.+|+.++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 34679999999999999999998643 346999999764 33456789999999999999999999999765 4568
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||+++++|.+++..... .+.+.....+ +.||..+.++.+||+|||+++.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999854221 1233332222 23344467889999999999876543
Q ss_pred ccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
... ......||+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... ........ ...
T Consensus 167 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~---~~~-------- 232 (281)
T 3cc6_A 167 DYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEK---GDR-------- 232 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHH---TCC--------
T ss_pred ccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhc---CCC--------
Confidence 221 2233567889999999998999999999999999999998 99997533221 11111111 000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+......+.+++..||+.||++||++.|++++|+..
T Consensus 233 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 233 --LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 011112335678899999999999999999999999764
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-31 Score=288.21 Aligned_cols=230 Identities=23% Similarity=0.288 Sum_probs=161.2
Q ss_pred hcCcceeeeeccccceeEEeeee----cCCcEEEEEEeccCC----hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~----~~~~~VAVK~l~~~~----~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
.++|++.++||+|+||.||+++. .+++.||||.+++.. ......+.+|+.++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999987 368899999997542 2334568899999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
.++||||+++|+|.+++...... |..++.|++..+.||..+.++.+||+|||+++......
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 175 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG 175 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence 99999999999999888542211 00111112222344555788999999999998653322
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
.......||+.|||||.+.+..++.++|||||||++|||++|+.|+..... ...... .... .
T Consensus 176 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~---i~~~-~---------- 237 (327)
T 3a62_A 176 --TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTIDK---ILKC-K---------- 237 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHH---HHHT-C----------
T ss_pred --ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--HHHHHH---HHhC-C----------
Confidence 123346899999999999999999999999999999999999999853221 111111 1110 0
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
...+......+.+++..||+.||++|| ++.|+++.
T Consensus 238 ~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 011222345678899999999999999 67787764
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-31 Score=283.38 Aligned_cols=238 Identities=26% Similarity=0.360 Sum_probs=171.4
Q ss_pred cCcceeeeeccccceeEEeeeecC----CcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE-QGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~-~~~~~l 598 (823)
..|++.++||+|+||.||+|+..+ ...||||.+... .....+.|.+|+.++++++||||+++++++.+ ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 458888999999999999998643 236899999764 33456789999999999999999999999754 567899
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++|+|.+++..... .+.+.....+ +.||..+.++.+||+|||+++.+....
T Consensus 105 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHCTTC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999965322 2233332222 234445788899999999998765433
Q ss_pred cc--cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 657 LQ--GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN-TGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 657 ~~--~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p-~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
.. .......||+.|+|||.+.+..++.++||||||+++|||++|+.| +...... ....... ....
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~~---~~~~------- 250 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLL---QGRR------- 250 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHHH---TTCC-------
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHh---cCCC-------
Confidence 21 223345788999999999999999999999999999999996554 3322111 1111110 1100
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
...+......+.+++..||+.||++||++.+++++|+......
T Consensus 251 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 251 ---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred ---CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 0011122346888999999999999999999999998875443
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-31 Score=289.99 Aligned_cols=226 Identities=19% Similarity=0.246 Sum_probs=172.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||+++.. +++.||||.+.+.. ....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 67999999999999999999876 58999999996532 234578899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|.+++...... |..++.||+..+.||+.+.++.+||+|||+++.+... .
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-----~ 195 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----T 195 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----B
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC-----c
Confidence 999999999998642211 1111112222234555688999999999999976432 2
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...+||+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+.. ... .+.. ..+.
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~---~i~-~~~~----------~~p~ 259 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYE---KIV-SGKV----------RFPS 259 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHH-HCCC----------CCCT
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHH---HHH-cCCC----------CCCC
Confidence 346899999999999999999999999999999999999999853221 11111 111 1110 1122
Q ss_pred HHHHHHHHHHHHccccCcCCCCC-----HHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPT-----MSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~ 771 (823)
.....+.+++..||+.||++||+ +.+|++.
T Consensus 260 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 23456788999999999999998 8888764
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-31 Score=314.34 Aligned_cols=226 Identities=25% Similarity=0.309 Sum_probs=165.5
Q ss_pred eeeccccceeEEeeeec---CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLL---NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||.||+|.+. .++.||||+++... ....++|.+|++++.+++|||||+++++|. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 48999999999999653 35789999997542 344678999999999999999999999996 4568899999999
Q ss_pred CCchhhccCCCcccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCCcc-ccccc
Q 003402 606 KSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGDEL-QGNTK 662 (823)
Q Consensus 606 gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~~~-~~~~~ 662 (823)
|+|.+++.... .+.+..+. ..+.||+.+.++.+||+|||+|+.+..+.. .....
T Consensus 454 g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999986432 23333322 223455557888999999999998754432 22233
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...||+.|||||++....++.++|||||||+||||++ |+.|+...... .+.. ....+. ....+.
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~----~i~~~~---------~~~~p~ 595 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTA----MLEKGE---------RMGCPA 595 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH----HHHTTC---------CCCCCT
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH----HHHcCC---------CCCCCC
Confidence 3567899999999999999999999999999999999 99998543221 1111 111111 111222
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.....+.+++..||+.||++||++.+|+++|+..
T Consensus 596 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 596 GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 3446788999999999999999999999999865
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-31 Score=290.23 Aligned_cols=231 Identities=18% Similarity=0.208 Sum_probs=160.6
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||.||+++.. +++.||||.+.... ...+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999999999876 58899999997543 2346789999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCC--ceeceeeceeecCCCccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMN--PKISDFGMARMFGGDELQ 658 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~--~KI~DFGla~~~~~~~~~ 658 (823)
+++|+|.+++..... +....... .+.||+.+.+.. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~~---~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--- 171 (361)
T 3uc3_A 98 ASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--- 171 (361)
T ss_dssp CCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc---
Confidence 999999998854221 22222222 223444454544 999999999854322
Q ss_pred cccccccccccccccccccCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVK-SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~k-sDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.......||+.|||||++.+..++.+ +|||||||++|||++|+.|+....... .+........... ...
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~---------~~~ 241 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVK---------YSI 241 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTTC---------CCC
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcCC---------CCC
Confidence 12234679999999999988888766 899999999999999999986433221 1111111111110 000
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.........+.+++..||+.||++|||+.|+++.
T Consensus 242 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 PDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0111223567889999999999999999999875
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-31 Score=291.11 Aligned_cols=225 Identities=27% Similarity=0.378 Sum_probs=167.2
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+.|++.+.||+|+||.||+|+. .+++.||||++.... ....++|.+|++++.+++|||||++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588999999999999999986 468999999997432 234567999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+. |+|.+++.... ..+.+.....+ +.||..+.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 9997 67777664221 12333333222 23444578889999999999875432
Q ss_pred ccccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 659 GNTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
....||+.|||||++. ...++.++|||||||++|||++|+.|+..... ............ .. .
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-----~~~~~~~~~~~~-~~-----~ 273 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNES-PA-----L 273 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCC-CC-----C
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhcCC-CC-----C
Confidence 2467999999999984 57799999999999999999999999743221 111111111111 00 0
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
........+.+++..||+.||++|||+.++++..
T Consensus 274 ---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 274 ---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred ---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0112234577899999999999999999998753
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-31 Score=286.62 Aligned_cols=245 Identities=23% Similarity=0.296 Sum_probs=168.2
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHH--HHhcCCCceeeEEeEEEe-----CCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMML--IAKLQHRNLVRLLGCCIE-----QGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~--l~~l~H~Niv~l~g~~~~-----~~~~ 596 (823)
.++|++.++||+|+||.||+|+. +++.||||++... ..+.+..|.++ +..++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36799999999999999999987 6799999999643 23445555544 455899999999987654 2367
Q ss_pred EEEEEcccCCCchhhccCCCcc------------------ccc---------CHHHHHHHHhccccccCCCceeceeece
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK------------------HLL---------GWQLRVRIIDGIAQDQHMNPKISDFGMA 649 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~------------------~~l---------~~~~r~~i~~~ia~d~~~~~KI~DFGla 649 (823)
++||||+++|+|.+++...... |.. ++.|++..+.||+.+.++.+||+|||++
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence 8999999999999998543221 111 2333333444555577889999999999
Q ss_pred eecCCCcc------ccccccccccccccccccccC-------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCcc---c
Q 003402 650 RMFGGDEL------QGNTKRIVGTYGYMSPEYALE-------GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF---N 713 (823)
Q Consensus 650 ~~~~~~~~------~~~~~~~~Gt~~YmAPE~~~~-------~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~---~ 713 (823)
+.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.|+........ .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~ 247 (336)
T 3g2f_A 168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247 (336)
T ss_dssp EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence 98754321 112234579999999999987 4567899999999999999999877643222110 0
Q ss_pred hh---------HHHHhhccCCccccccCccccc--CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 714 LL---------GHAWSLCKNDRAHELMDPVLQN--EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 714 l~---------~~~~~~~~~~~~~~l~d~~l~~--~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
+. ........... ..+.+.. .........+.+++..||+.||++|||+.||++.|+..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 248 FQTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp THHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 00 00000000000 0111111 112335667999999999999999999999999998864
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-31 Score=299.78 Aligned_cols=243 Identities=21% Similarity=0.265 Sum_probs=175.3
Q ss_pred cHHHHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEE
Q 003402 516 SFASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591 (823)
Q Consensus 516 ~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~ 591 (823)
.+.+.....++|++.++||+|+||+||+++.. +++.||||++++.. ....+.+.+|+.++.+++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556788999999999999999999885 58999999997532 122345889999999999999999999999
Q ss_pred eCCeEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 592 EQGEKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 592 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
+.+..+|||||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++.
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 999999999999999999998642111 111112222234566668899999999999998
Q ss_pred cCCCcccccccccccccccccccccc-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYAL-------EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~-------~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
+..+... .....+||+.|||||++. ...++.++|||||||++|||++|+.||...... ...... ...
T Consensus 212 ~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i---~~~ 285 (412)
T 2vd5_A 212 LRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYGKI---VHY 285 (412)
T ss_dssp CCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH---HTH
T ss_pred ccCCCcc-ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHHHH---Hhc
Confidence 7544321 223468999999999987 457899999999999999999999998533211 111111 000
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCC---CCHHHHHHH
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDR---PTMSDVVSM 771 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~R---Pt~~evl~~ 771 (823)
. ..+..+.. .......+.+++..||+ +|++| |++.|++++
T Consensus 286 ~--~~~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 286 K--EHLSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp H--HHCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred c--cCcCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0 00000111 11234567889999999 99998 689998765
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-30 Score=277.96 Aligned_cols=229 Identities=17% Similarity=0.232 Sum_probs=170.9
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||.||+|+... +..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 3569999999999999999998765 679999999876556678899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------Hhcccc---ccCCCceeceeeceeecCCCcc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQ---DQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~---d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+++++|.+++..... +.+.....+ +.||.. +.++.+||+|||+++.+....
T Consensus 88 ~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~- 163 (277)
T 3f3z_A 88 CTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK- 163 (277)
T ss_dssp CCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-
T ss_pred cCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-
Confidence 999999888754221 233322222 234444 567889999999998765433
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......||+.|+|||.+.+ .++.++||||||+++|||++|+.|+...... .... .. ..+.. ... ....
T Consensus 164 --~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~---~~-~~~~~-~~~-~~~~- 231 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVML---KI-REGTF-TFP-EKDW- 231 (277)
T ss_dssp --CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH---HH-HHCCC-CCC-HHHH-
T ss_pred --chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHH---HH-HhCCC-CCC-chhh-
Confidence 2234579999999998765 4999999999999999999999998543211 1111 11 00000 000 0000
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.||++||++.++++.
T Consensus 232 ---~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 232 ---LNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---hcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0124567889999999999999999999763
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=287.40 Aligned_cols=248 Identities=21% Similarity=0.265 Sum_probs=181.0
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--eEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG--EKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~--~~~lV~ 600 (823)
+.|.+.++||+|+||.||+|+... ++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 568999999999999999998765 8999999997543 334678899999999999999999999998765 789999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccc----ccCCCceeceeeceeecCC
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQ----DQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~----d~~~~~KI~DFGla~~~~~ 654 (823)
||+++|+|.+++........+.+.....++ .||.. +.++.+||+|||+++.+..
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 999999999999764433224444443333 23333 4556699999999998754
Q ss_pred CccccccccccccccccccccccC--------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 655 DELQGNTKRIVGTYGYMSPEYALE--------GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~~--------~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||......... ............
T Consensus 169 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~~~~p 244 (396)
T 4eut_A 169 DEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKIITGKP 244 (396)
T ss_dssp GGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHHHHHSCC
T ss_pred CCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHHHhcCCC
Confidence 332 234679999999999865 56789999999999999999999998644322111 111111111110
Q ss_pred ---cc---cccCc--------ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 727 ---AH---ELMDP--------VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 727 ---~~---~l~d~--------~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.. ...+. .............+.+++..||+.||++||++.|+++.++..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 00 00000 0111234566778889999999999999999999999887654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-31 Score=289.69 Aligned_cols=231 Identities=21% Similarity=0.239 Sum_probs=172.2
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~ 597 (823)
..++|++.++||+|+||+||+++... ++.||||.+++.. ....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 34789999999999999999999865 7899999997532 23456788999999988 8999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+||||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+++......
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 175 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-- 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC--
Confidence 999999999999988642210 11112222223345666889999999999998643222
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......+||+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+... .... . ..
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~---i~~~-~----------~~ 239 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQS---IMEH-N----------VA 239 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH---HHHC-C----------CC
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHH---HHhC-C----------CC
Confidence 223457899999999999999999999999999999999999999853221 111111 1110 0 01
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCC-----HHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPT-----MSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~ 771 (823)
++......+.+++..||+.||++||+ +.+|++.
T Consensus 240 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 12233456888999999999999996 4666653
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=280.10 Aligned_cols=240 Identities=23% Similarity=0.266 Sum_probs=166.5
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||.||+|+... ++.||||++.... ....+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 579999999999999999998864 8999999986542 2335678999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|..++..... +.+.....+ +.||..+.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~~~---~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-- 157 (311)
T ss_dssp CCSEEHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHhhhcC---CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc--
Confidence 9999999988754322 233222222 2344457888999999999987653321
Q ss_pred ccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhc-----------cCCc-
Q 003402 660 NTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLC-----------KNDR- 726 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~-----------~~~~- 726 (823)
......||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+...... .......... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhcccccccccccccccc
Confidence 2234579999999999876 67899999999999999999999998543221 1111111100 0000
Q ss_pred c--ccccCccccc---CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 A--HELMDPVLQN---EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~--~~l~d~~l~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ..+.++.... .........+.+++..||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0000000000 0001234567889999999999999999999874
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-31 Score=302.16 Aligned_cols=230 Identities=18% Similarity=0.200 Sum_probs=163.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.++|++.++||+|+||.||+++.. +++.||||.+... .....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999865 4889999999753 233456788999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc-------------------cc-cCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 600 YEYMVNKSLDVFLFDPTKK-------------------HL-LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~-------------------~~-l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|||+++|+|..++...... |. .++.||+..+.||+.+.++.+||+|||+|+...... .
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--~ 304 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--A 304 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC--c
Confidence 9999999998888532210 11 122233334455666888999999999998643322 2
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....+||+.|||||++.+..++.++|||||||++|||++|+.|+..... ..+.... .... ...
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i---~~~~-----------~~~ 368 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELI---LMEE-----------IRF 368 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH---HHCC-----------CCC
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHH---HhCC-----------CCC
Confidence 23347899999999999999999999999999999999999999853221 1111111 0000 011
Q ss_pred CHHHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
+......+.+++..||+.||++|| ++.|+++.
T Consensus 369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 222345678899999999999999 99999874
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-30 Score=277.36 Aligned_cols=227 Identities=22% Similarity=0.375 Sum_probs=151.0
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 367999999999999999999874 68999999996432 22357899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp EECCTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred EecCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999999999865321 23333333222 234447888999999999987643221
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......||+.|+|||.+.+..++.++||||||+++|||++|+.|+....... .. ..+.....
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~------------~~~~~~~~-- 229 (278)
T 3cok_A 168 --KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN--TL------------NKVVLADY-- 229 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------------CCSSCC--
T ss_pred --cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH--HH------------HHHhhccc--
Confidence 1223579999999999999999999999999999999999999985432211 00 00000000
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+......+.+++..||+.||++||++.++++
T Consensus 230 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 230 EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 112223456788999999999999999999876
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=277.03 Aligned_cols=238 Identities=20% Similarity=0.231 Sum_probs=166.5
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.++|++.++||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999875 58899999997542 23357899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++++|.+++.... .+.+.....++ .||..+.++.+||+|||+++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999999986422 23333332222 234447788999999999987654322
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... . ........ . ..+ .
T Consensus 190 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~---~~~~~~~~-~---~~~---~ 255 (309)
T 2h34_A 190 -TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---V---MGAHINQA-I---PRP---S 255 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---H---HHHHHHSC-C---CCG---G
T ss_pred -ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---H---HHHHhccC-C---CCc---c
Confidence 1223457999999999999999999999999999999999999998532211 1 11111110 0 000 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCC-CHHHHHHHHhcccCC
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRP-TMSDVVSMINNELFN 778 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~~~ 778 (823)
.........+.+++..||+.||++|| ++.++++.|+..+..
T Consensus 256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 256 TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 11122334677899999999999999 999999999887443
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-30 Score=272.57 Aligned_cols=232 Identities=24% Similarity=0.353 Sum_probs=167.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
++|.....||+|+||.||+|+.. +++.||||.+........+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 34455569999999999999864 57899999998766666788999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHH----HHH------------------hcccccc-CCCceeceeeceeecCCCccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRV----RII------------------DGIAQDQ-HMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~----~i~------------------~~ia~d~-~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
++++|.+++..........+.... +++ .||..+. ++.+||+|||+++...... ..
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~ 179 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PC 179 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--Cc
Confidence 999999998654322222333322 222 2233355 7899999999998764322 12
Q ss_pred cccccccccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 661 TKRIVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~--~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.....||+.|+|||.+.+.. ++.++||||||+++|||++|+.|+............. ... . . ...
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~--~-----~----~~~ 246 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV--GMF--K-----V----HPE 246 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH--HHH--C-----C----CCC
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh--ccc--c-----c----ccc
Confidence 23467999999999987654 8999999999999999999999975322111111000 000 0 0 011
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++..||+.||++||++.++++.
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222334567889999999999999999999863
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-31 Score=283.47 Aligned_cols=234 Identities=25% Similarity=0.331 Sum_probs=171.8
Q ss_pred hcCcceee-eeccccceeEEeeeec---CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 524 TENFSIQS-KLGEGGFGPVYKGRLL---NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 524 ~~~f~~~~-~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
.++|.+.+ .||+|+||.||+|.+. .++.||||.++... ....++|.+|+.++++++||||+++++++ +.+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35688887 9999999999999653 36789999997542 23357899999999999999999999999 677889
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||+++++|.+++..... +.......++ .||..+.++.+||+|||+++.+...
T Consensus 94 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCHHHHHHhCcC---CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 99999999999999864321 3333322222 3344477889999999999987544
Q ss_pred ccc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 656 ELQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 656 ~~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... .......||+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... .+.. ....+..
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~----~~~~~~~------ 238 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTA----MLEKGER------ 238 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH----HHHTTCC------
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH----HHHcCCC------
Confidence 321 22223457899999999998889999999999999999999 99987543211 1111 1111110
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
...+......+.+++..||+.||++||++.+|++.|+...
T Consensus 239 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 239 ---MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1112233457888999999999999999999999998764
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-31 Score=291.76 Aligned_cols=242 Identities=25% Similarity=0.393 Sum_probs=176.2
Q ss_pred cCcceeeeeccccceeEEeeee-----cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--eEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG--EKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~--~~~ 597 (823)
++|++.++||+|+||.||++++ .+++.||||++........+.|.+|+.++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 5689999999999999999984 358899999998766666788999999999999999999999987654 789
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||+++++|.+++..... .+.+.....++ .||..+.++.+||+|||+++.....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 99999999999999864321 23333333322 2344467889999999999987544
Q ss_pred ccc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc--------
Q 003402 656 ELQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR-------- 726 (823)
Q Consensus 656 ~~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~-------- 726 (823)
... .......||..|+|||.+.+..++.++||||||+++|||++|+.|+.....+ +.. ......
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~----~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMR----MIGNDKQGQMIVFH 271 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHH----HHCTTCCTHHHHHH
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHH----hhccccchhhhHHH
Confidence 321 1223356788899999999889999999999999999999999886421100 000 000000
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+.+........+......+.+++..||+.||++||++.+|++.|+..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0011111111112233456788899999999999999999999999865
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-30 Score=280.98 Aligned_cols=229 Identities=21% Similarity=0.254 Sum_probs=170.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
+.|++.+.||+|+||.||+++.. +++.||||.+..... ...+++.+|+.++.+++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 56899999999999999999876 489999999875422 13678999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCC----Cceeceeeceee
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHM----NPKISDFGMARM 651 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~----~~KI~DFGla~~ 651 (823)
+||||+++++|.+++..... +.......++ .||..+.++ .+||+|||+++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEECCCCSCBHHHHHHTCSC---EEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 99999999999999865321 2222222222 233335555 799999999998
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
+.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.|+..... ...... . .... ...
T Consensus 169 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~---i-~~~~--~~~ 237 (321)
T 2a2a_A 169 IEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLAN---I-TSVS--YDF 237 (321)
T ss_dssp CCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHH---H-HTTC--CCC
T ss_pred cCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHHH---H-Hhcc--ccc
Confidence 75432 12345799999999999999999999999999999999999999853221 111111 1 0000 000
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++.... .....+.+++..||+.||++|||+.|+++.
T Consensus 238 ~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 238 DEEFFS----HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CHHHHT----TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred Chhhhc----ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111 123467889999999999999999999874
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-31 Score=290.52 Aligned_cols=184 Identities=25% Similarity=0.299 Sum_probs=146.5
Q ss_pred ccHHHHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-----CCceeeEEe
Q 003402 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-----HRNLVRLLG 588 (823)
Q Consensus 515 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-----H~Niv~l~g 588 (823)
+++.......++|.+.++||+|+||.||+|+.. +++.||||+++.. ....+.+..|+.++.+++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 444444455688999999999999999999874 5889999999753 344567888999999997 999999999
Q ss_pred EEEeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhcccccc---------
Q 003402 589 CCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQ--------- 637 (823)
Q Consensus 589 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~--------- 637 (823)
++...+..++||||+ +++|.+++...... .+.+..... .+.||+.+.
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRNNYN-GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEE
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccc
Confidence 999999999999999 99999998643321 122222222 223444443
Q ss_pred ----------------CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 003402 638 ----------------HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701 (823)
Q Consensus 638 ----------------~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~ 701 (823)
++.+||+|||+|+..... .....||+.|||||++.+..++.++|||||||++|||++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 256 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence 778999999999875432 23467999999999999999999999999999999999999
Q ss_pred CCCCC
Q 003402 702 KNTGV 706 (823)
Q Consensus 702 ~p~~~ 706 (823)
.||..
T Consensus 257 ~pf~~ 261 (360)
T 3llt_A 257 LLFRT 261 (360)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 99854
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=285.16 Aligned_cols=227 Identities=19% Similarity=0.233 Sum_probs=172.3
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.++|.+.+.||+|+||.||+++..+ ++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 3679999999999999999998765 789999998653 234557799999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++++|.+++.... .+.+.....+ ..||..+.++.+||+|||+++.+.....
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999999999875421 2233332222 2344457888999999999987653321
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... .. ....... ..
T Consensus 197 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~---~~~~~~~-~~---------- 258 (335)
T 2owb_A 197 --RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ET---YLRIKKN-EY---------- 258 (335)
T ss_dssp --CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HH---HHHHHHT-CC----------
T ss_pred --cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--HH---HHHHhcC-CC----------
Confidence 223467999999999999999999999999999999999999998533211 11 1111000 00
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++..||+.||++||++.|+++.
T Consensus 259 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0111223457789999999999999999999874
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-30 Score=275.93 Aligned_cols=230 Identities=20% Similarity=0.282 Sum_probs=170.0
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.++|++.++||+|+||.||+|... +++.||||.+... .....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 478999999999999999999875 4889999998653 3344578899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccC---CCceeceeeceeecCCC
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQH---MNPKISDFGMARMFGGD 655 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~---~~~KI~DFGla~~~~~~ 655 (823)
||+++++|.+++.... .+.......++ .||..+.+ ..+||+|||+++.....
T Consensus 85 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999988775422 12332222222 23333333 44999999999876543
Q ss_pred ccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.. .....||+.|+|||.+.+..++.++||||||+++|||++|+.|+..... ........ .+.. ....+
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~----~~~~-~~~~~-- 229 (284)
T 3kk8_A 162 EA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIK----AGAY-DYPSP-- 229 (284)
T ss_dssp CB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH----HTCC-CCCTT--
T ss_pred cc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHHHHH----hccc-cCCch--
Confidence 22 2346799999999999999999999999999999999999999853221 11111110 0000 00000
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........+.+++..||+.||++|||+.|+++.
T Consensus 230 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 ---EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ---TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ---hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 011223567889999999999999999999874
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=285.27 Aligned_cols=220 Identities=21% Similarity=0.315 Sum_probs=170.1
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~ 594 (823)
.++|++.++||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 467999999999999999999864 588999999975421 13346788999999999999999999999999
Q ss_pred eEEEEEEcccCC-CchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceee
Q 003402 595 EKILIYEYMVNK-SLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 595 ~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~ 651 (823)
..++||||+..| +|..++..... +.+.....+ +.||..+.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 999999999887 99998865322 333332222 2345557889999999999998
Q ss_pred cCCCccccccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
+..... .....||+.|||||.+.+..+ +.++|||||||++|||++|+.|+.... +.
T Consensus 180 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------------------~~ 236 (335)
T 3dls_A 180 LERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE--------------------ET 236 (335)
T ss_dssp CCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG--------------------GG
T ss_pred CCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH--------------------HH
Confidence 754332 234679999999999998887 889999999999999999999984211 00
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...... .+......+.+++..||+.||++|||+.++++.
T Consensus 237 ~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 VEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TTTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HhhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111110 111134567889999999999999999999885
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-30 Score=274.56 Aligned_cols=227 Identities=21% Similarity=0.342 Sum_probs=174.1
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.+.|++.++||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 366999999999999999999864 58899999997543 3456789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|.+++... .+.+.....++ .+|..+.++.+||+|||+++.+.....
T Consensus 101 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 174 (303)
T ss_dssp CCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--
T ss_pred eCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc--
Confidence 99999999998643 23333333332 234447788999999999988754332
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... ..... ... .. .+.+
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~---~~~-~~-----~~~~---- 239 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFL---IPK-NN-----PPTL---- 239 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH---HHH-SC-----CCCC----
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHH---hhc-CC-----CCCC----
Confidence 223467999999999999999999999999999999999999997533211 11111 100 10 0111
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++..||+.||++|||+.++++.
T Consensus 240 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 240 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11223467889999999999999999999875
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=276.09 Aligned_cols=243 Identities=23% Similarity=0.315 Sum_probs=157.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.++||+|+||.||+|+.. +++.||||.++... ....+.+.+|+.++++++|||||++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 357889999999999999999875 48999999997543 2334678999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCC---cccccCHHHHH----HH------------------HhccccccCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPT---KKHLLGWQLRV----RI------------------IDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~---~~~~l~~~~r~----~i------------------~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|++ |+|.+++.... ....+.+.... ++ +.||..+.++.+||+|||+++.+....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 998 68988875321 11123333222 22 234445788999999999999865332
Q ss_pred cccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc---------
Q 003402 657 LQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR--------- 726 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~--------- 726 (823)
. ......||+.|||||.+.+ ..++.++|||||||++|||++|+.||...... ..............
T Consensus 163 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 163 N--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp C--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCTTTCGGGGG
T ss_pred c--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCChhHhhhhhh
Confidence 1 2234578999999999976 46899999999999999999999998543221 11111111100000
Q ss_pred ccc-----------ccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 AHE-----------LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~~~-----------l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
... -+...+...........+.+++..||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000 000000111111234568899999999999999999998763
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-30 Score=275.08 Aligned_cols=241 Identities=17% Similarity=0.218 Sum_probs=174.1
Q ss_pred hcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEE-EeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC-IEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~-~~~~~~~lV~E 601 (823)
.++|++.+.||+|+||.||+|+. .+++.||||.+..... .+++.+|+.++.+++|++++..+.++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 36799999999999999999986 4689999999865432 25689999999999988876666555 66788899999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccc---ccCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQ---DQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~---d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+ +++|.+++..... .+.+.....++ .||.. +.++.+||+|||+++.+....
T Consensus 86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred ec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 99 9999999863221 23333333332 33443 478889999999999875543
Q ss_pred cc-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-ccchhHHHHhhccCCccccc
Q 003402 657 LQ-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 657 ~~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~l 730 (823)
.. .......||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... .................
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--- 239 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI--- 239 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH---
T ss_pred cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch---
Confidence 21 1224568999999999999999999999999999999999999998654322 11111111110000000
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCC
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 778 (823)
+.+ .......+.+++..||+.||++||++.+|++.|+.....
T Consensus 240 --~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 240 --EVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp --HHH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred --HHH----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 000 111235688899999999999999999999999876433
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=281.83 Aligned_cols=238 Identities=20% Similarity=0.250 Sum_probs=171.2
Q ss_pred HHHHHHhcCccee-eeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 003402 518 ASVTAATENFSIQ-SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE 592 (823)
Q Consensus 518 ~~~~~~~~~f~~~-~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~ 592 (823)
.......+.|.+. ++||+|+||.||+|+.. +++.||||.+... .....+++.+|+.++.++ +||||+++++++.+
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3344455667776 89999999999999876 4899999998753 233467899999999999 56999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------cccccc---CCCceeceee
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQ---HMNPKISDFG 647 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~---~~~~KI~DFG 647 (823)
.+..++||||+++|+|.+++..... ..+.+.....++. ||..+. ++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred CCeEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 9999999999999999999854322 2234433333322 333344 6889999999
Q ss_pred ceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc
Q 003402 648 MARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727 (823)
Q Consensus 648 la~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 727 (823)
+++.+.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... ......... ..
T Consensus 180 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~-~~--- 250 (327)
T 3lm5_A 180 MSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ETYLNISQV-NV--- 250 (327)
T ss_dssp GCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT-CC---
T ss_pred cccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHHHhc-cc---
Confidence 999875432 123467999999999999999999999999999999999999998533211 111111000 00
Q ss_pred ccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 728 ~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ............+.+++..||+.||++|||+.++++.
T Consensus 251 -~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 -D-----YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -C-----CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -c-----cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 0011112234567889999999999999999999875
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=283.57 Aligned_cols=240 Identities=25% Similarity=0.335 Sum_probs=167.4
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||.||+|+... ++.||||++.... ....+.+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 679999999999999999998765 8999999986442 2335678899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|..++..... +.+.....+ +.||..+.++.+||+|||+++.+.....
T Consensus 105 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 179 (331)
T 4aaa_A 105 FVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-- 179 (331)
T ss_dssp CCSEEHHHHHHHSTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred cCCcchHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc--
Confidence 9999999888654322 233322222 2344557888999999999987643321
Q ss_pred ccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHh-----------hc-cCCc
Q 003402 660 NTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS-----------LC-KNDR 726 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~-----------~~-~~~~ 726 (823)
......||+.|+|||.+.+. .++.++|||||||++|||++|+.|+...... ........ .. ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI--DQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCChhhhhHhhhccc
Confidence 22345799999999999875 7899999999999999999999998543221 11111000 00 0000
Q ss_pred cccccCcccccCC-----CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 AHELMDPVLQNEV-----SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ~~~l~d~~l~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+.... .......+.+++..||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0111111111111 11235678899999999999999999998763
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-30 Score=291.25 Aligned_cols=232 Identities=17% Similarity=0.257 Sum_probs=159.9
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--------GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE 592 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--------~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~ 592 (823)
...++|.+.++||+|+||.||+|.... ++.||||.+.... ......+.+|+.++++++|||||++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 345789999999999999999998754 7899999986531 112235889999999999999999999974
Q ss_pred CCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------Hhccccc---cCCCceeceee
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQD---QHMNPKISDFG 647 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d---~~~~~KI~DFG 647 (823)
.+..++||||+++|+|.+++..... +.+.....+ +.||+.+ .+..+||+|||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred cCceEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 5668999999999999998865332 333332222 2233333 34569999999
Q ss_pred ceeecCCCccccccccccccccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 648 MARMFGGDELQGNTKRIVGTYGYMSPEYALE---GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 648 la~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~---~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
+|+.+.... ......||+.|||||++.. ..++.++|||||||++|||++|+.|+....... .+.... ..
T Consensus 288 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i----~~ 359 (419)
T 3i6u_A 288 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQI----TS 359 (419)
T ss_dssp TTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHH----HT
T ss_pred cceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHH----hc
Confidence 998765332 2334689999999999863 678999999999999999999999986432221 111111 11
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.. ... +... ......+.+++..||+.||++||++.|+++.
T Consensus 360 ~~~-~~~-~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 GKY-NFI-PEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp TCC-CCC-HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCC-CCC-chhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 100 000 0000 1124567889999999999999999999874
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=277.15 Aligned_cols=225 Identities=23% Similarity=0.289 Sum_probs=167.6
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.++|++.+.||+|+||.||+|+... ++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 4679999999999999999998764 7799999986432 22356799999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++|+|.+++..... +.......+ +.||..+.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~- 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 163 (279)
T ss_dssp ECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccc-
Confidence 999999999988854221 222222222 234445788899999999997653322
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... .... ..... ..
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~---~~~~~-----------~~ 224 (279)
T 3fdn_A 164 ---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYK---RISRV-----------EF 224 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH---HHHHT-----------CC
T ss_pred ---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHH---HHHhC-----------CC
Confidence 23457999999999999999999999999999999999999998532211 1111 10000 00
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++..||+.||++||++.|+++.
T Consensus 225 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1122234567789999999999999999999985
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-30 Score=273.26 Aligned_cols=224 Identities=22% Similarity=0.350 Sum_probs=170.3
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----------
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE---------- 592 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~---------- 592 (823)
.++|++.+.||+|+||.||+|+.. +++.||||.+.... +.+.+|++++.+++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 356899999999999999999986 68999999997543 357789999999999999999999865
Q ss_pred ------CCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceec
Q 003402 593 ------QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKIS 644 (823)
Q Consensus 593 ------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~ 644 (823)
....++||||+++|+|.+++.... ...+.+.....++ .||..+.++.+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence 455899999999999999985421 1223443333332 23344678899999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
|||+++.+..... .....||+.|+|||.+.+..++.++||||||+++|||++|..|+.. . .........
T Consensus 165 Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~-------~-~~~~~~~~~ 233 (284)
T 2a19_B 165 DFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE-------T-SKFFTDLRD 233 (284)
T ss_dssp CCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH-------H-HHHHHHHHT
T ss_pred cchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh-------H-HHHHHHhhc
Confidence 9999998754332 2235799999999999999999999999999999999999887521 0 001111111
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
. .+ +......+.+++..||+.||++||++.|++++|+..
T Consensus 234 ~--------~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 234 G--------II----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp T--------CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred c--------cc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 11 111234577899999999999999999999999876
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-31 Score=291.37 Aligned_cols=226 Identities=19% Similarity=0.213 Sum_probs=160.3
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHH-HHhcCCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMML-IAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~-l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|++.++||+|+||+||+++... ++.||||.+++.. ....+.+.+|..+ ++.++|||||++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 3679999999999999999998764 7899999997542 2234567777776 577899999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||||+++|+|..++...... |..++.||+....||+.+.++.+||+|||+++...... .
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~--~ 194 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--S 194 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC--C
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC--C
Confidence 99999999999888542211 11112222333455666889999999999998643221 2
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....+||+.|||||++.+..++.++|||||||++|||++|+.||..... ..+.. ..... .. ..
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~---~i~~~-~~----------~~ 258 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYD---NILNK-PL----------QL 258 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHHH---HHHHS-CC----------CC
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHH---HHHhc-cc----------CC
Confidence 23457899999999999999999999999999999999999999853221 11111 11110 00 11
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSD 767 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~e 767 (823)
+......+.+++..||+.||++||++.+
T Consensus 259 ~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 259 KPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 1223456788999999999999999854
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=285.18 Aligned_cols=228 Identities=16% Similarity=0.152 Sum_probs=159.2
Q ss_pred cCccee-eeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHH-hcCCCceeeEEeEEEe----CCeEE
Q 003402 525 ENFSIQ-SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIA-KLQHRNLVRLLGCCIE----QGEKI 597 (823)
Q Consensus 525 ~~f~~~-~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~-~l~H~Niv~l~g~~~~----~~~~~ 597 (823)
++|.+. ++||+|+||+||+++.. +++.||||+++.. ..+.+|+.++. ..+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 567665 68999999999999875 4889999999643 45778888874 4589999999999876 56789
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccccc---CCCceeceeeceeec
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQ---HMNPKISDFGMARMF 652 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~---~~~~KI~DFGla~~~ 652 (823)
|||||+++|+|.+++..... ..+.+.....++ .||+.+. ++.+||+|||+++..
T Consensus 136 lv~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp EEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEeCCCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 99999999999999975322 123333332222 3344454 788999999999976
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCcc--chhHHHHhhccCCccccc
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF--NLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~l 730 (823)
.... .....+||+.|||||++.+..++.++|||||||++|||++|+.||........ ....... .+.. ..
T Consensus 215 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~-~~ 286 (400)
T 1nxk_A 215 TSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQY-EF 286 (400)
T ss_dssp C--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCC-CC
T ss_pred CCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCcc-cC
Confidence 4322 22346899999999999999999999999999999999999999864432211 1111110 0000 00
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ..........+.+++..||+.||++|||+.|+++.
T Consensus 287 ~-----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 287 P-----NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp C-----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C-----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 00011234568889999999999999999999985
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-31 Score=279.43 Aligned_cols=234 Identities=23% Similarity=0.342 Sum_probs=171.8
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~~l 598 (823)
.++|++.+.||+|+||.||+++.. +++.||+|.+... .....+.+.+|+.++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367999999999999999999875 5899999999753 33445789999999999999999999998865 578999
Q ss_pred EEEcccCCCchhhccCCCc-ccccCHHHHHH---------------------------HHhccccccCCCceeceeecee
Q 003402 599 IYEYMVNKSLDVFLFDPTK-KHLLGWQLRVR---------------------------IIDGIAQDQHMNPKISDFGMAR 650 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~-~~~l~~~~r~~---------------------------i~~~ia~d~~~~~KI~DFGla~ 650 (823)
||||+++++|.+++..... ...+.+..... .+.||..+.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 9999999999999854211 11122222222 2234445778899999999998
Q ss_pred ecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccc
Q 003402 651 MFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 651 ~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l 730 (823)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.|+..... ..+.... ..+...
T Consensus 165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i----~~~~~~-- 234 (279)
T 2w5a_A 165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKI----REGKFR-- 234 (279)
T ss_dssp HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HHTCCC--
T ss_pred eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHH----hhcccc--
Confidence 7643321 12235799999999999999999999999999999999999999754321 1111111 111111
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
..+......+.+++..||+.||++||++.||++.+..
T Consensus 235 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 235 -------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1122234568889999999999999999999987643
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-30 Score=298.60 Aligned_cols=233 Identities=21% Similarity=0.261 Sum_probs=175.3
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
..++|++.++||+|+||.||+|+.. +++.||||++.+. .....+.+.+|+.++.+++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999875 5899999999653 12345678999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++|+|..++...... .+..... +..+.||+.+.++.+||+|||+|+.+....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEEcCCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999999988654321 1232222 222345556889999999999999875432
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
. ....+||+.|||||++.+..++.++|||||||++|||++|+.||........ . .......... .
T Consensus 341 ~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~-~~i~~~i~~~----------~ 405 (576)
T 2acx_A 341 T---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-R-EEVERLVKEV----------P 405 (576)
T ss_dssp C---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-H-HHHHHHHHHC----------C
T ss_pred c---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-H-HHHHHHhhcc----------c
Confidence 2 2345899999999999999999999999999999999999999864332110 0 0011110000 0
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
..++......+.+++..||+.||++|| ++.||+++
T Consensus 406 ~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 112223345788899999999999999 67888763
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-30 Score=274.29 Aligned_cols=240 Identities=18% Similarity=0.215 Sum_probs=170.7
Q ss_pred hcCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEE-EeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC-IEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~-~~~~~~~lV~E 601 (823)
.++|++.+.||+|+||.||+|+. .+++.||||.+..... .+++.+|+.++.+++|+|++..++.+ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 46799999999999999999986 4588999998764322 24688999999999988877666655 66788899999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccc---ccCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQ---DQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~---d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+ +++|.+++..... .+.+.....++ .||.. +.++.+||+|||+++.+....
T Consensus 86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred cc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 99 9999999863221 23333333322 34444 678889999999999875443
Q ss_pred cc-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-ccchhHHHHhhccCCccccc
Q 003402 657 LQ-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD-SFNLLGHAWSLCKNDRAHEL 730 (823)
Q Consensus 657 ~~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~l 730 (823)
.. .......||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... .................
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--- 239 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI--- 239 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH---
T ss_pred cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh---
Confidence 21 1233568999999999999999999999999999999999999998654332 11111111100000000
Q ss_pred cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccC
Q 003402 731 MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF 777 (823)
Q Consensus 731 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 777 (823)
+... ......+.+++..||+.||++||++.+|+++|+....
T Consensus 240 --~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 240 --EVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp --HHHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred --hhhh----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 0000 1123568889999999999999999999999987643
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=278.75 Aligned_cols=229 Identities=18% Similarity=0.238 Sum_probs=168.8
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|.+.+.||+|+||.||+++.. +++.||||.+........+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 357899999999999999999875 5899999999865444556799999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------Hhcccc---ccCCCceeceeeceeecCCCcc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQ---DQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~---d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+++++|.+++.... .+.......+ +.||.. +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-- 162 (304)
T 2jam_A 88 VSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-- 162 (304)
T ss_dssp CCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--
T ss_pred CCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--
Confidence 99999988875322 1222222221 234444 56788999999999865332
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
......||+.|+|||.+.+..++.++||||||+++|||++|+.|+..... ..+.... ..+.. .. ..
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i----~~~~~-~~-----~~ 228 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKI----KEGYY-EF-----ES 228 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHH----HHCCC-CC-----CT
T ss_pred --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----HcCCC-CC-----Cc
Confidence 22345799999999999999999999999999999999999999753221 1111111 11100 00 01
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.........+.+++..||+.||++||++.|+++.
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112234568889999999999999999999874
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-30 Score=283.23 Aligned_cols=243 Identities=15% Similarity=0.158 Sum_probs=175.4
Q ss_pred cCcceeeeeccccceeEEeeeecC---------CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceee----------
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN---------GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR---------- 585 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~---------~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~---------- 585 (823)
++|.+.+.||+|+||.||+|+... ++.||||.+... +.+.+|+.++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 679999999999999999998764 789999998754 46889999999999999998
Q ss_pred -----EEeEEEe-CCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------cccccc
Q 003402 586 -----LLGCCIE-QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQ 637 (823)
Q Consensus 586 -----l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~ 637 (823)
+++++.. ++..++||||+ +++|.+++.... ...+.+.....++. ||..+.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcC
Confidence 6788877 78899999999 999999996431 12344444444333 333356
Q ss_pred CC--CceeceeeceeecCCCccc-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 003402 638 HM--NPKISDFGMARMFGGDELQ-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD 710 (823)
Q Consensus 638 ~~--~~KI~DFGla~~~~~~~~~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~ 710 (823)
++ .+||+|||+++.+...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.|+......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 66 8999999999876533211 1123458999999999999999999999999999999999999998654322
Q ss_pred ccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCC
Q 003402 711 SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779 (823)
Q Consensus 711 ~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 779 (823)
...+......... ....+.+.... .......+.+++..||+.||++||++.+|+++|+......
T Consensus 275 ~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 275 TEDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp HHHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 2222221111111 11111111110 0112356888999999999999999999999998865433
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-30 Score=278.21 Aligned_cols=228 Identities=25% Similarity=0.392 Sum_probs=164.2
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-CeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-GEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-~~~~lV~Ey 602 (823)
.++|++.+.||+|+||.||+++. .++.||||.++... ..+.|.+|+.++.+++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 36799999999999999999987 47899999997542 457899999999999999999999997655 478999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++++|.+++..... ..+.+.....+ +.||..+.++.+||+|||+++.....
T Consensus 97 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----- 170 (278)
T ss_dssp CTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc-----
Confidence 999999999854211 11222222222 23444477889999999999865432
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... .+... . ..+. ....
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~---~-~~~~---------~~~~ 235 (278)
T 1byg_A 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPR---V-EKGY---------KMDA 235 (278)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHH---H-TTTC---------CCCC
T ss_pred ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH---H-hcCC---------CCCC
Confidence 123467899999999999999999999999999999998 88887543221 11111 1 1110 0111
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+......+.+++..||+.||++||++.++++.|+..
T Consensus 236 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 236 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 223345688899999999999999999999999764
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=284.74 Aligned_cols=240 Identities=22% Similarity=0.268 Sum_probs=171.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||+++.. +++.||+|.+... .....+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 57999999999999999999876 5889999999754 334457899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHH-----------------------HHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQ-----------------------LRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~-----------------------~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
+++++|.+++..... +.+. |++..+.||..+.++.+||+|||+++.+...
T Consensus 113 ~~~~~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 185 (360)
T ss_dssp CTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----
T ss_pred CCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc----
Confidence 999999999854221 1221 1122233455578889999999999765321
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHH----------HHhh--------
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGH----------AWSL-------- 721 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~----------~~~~-------- 721 (823)
......||+.|+|||.+.+..++.++|||||||++|||++|+.|+............. ....
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence 2234689999999999999999999999999999999999999986432211100000 0000
Q ss_pred ------ccCCccccccCccccc----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 722 ------CKNDRAHELMDPVLQN----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 722 ------~~~~~~~~l~d~~l~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.++..... .........+.+++..||+.||++|||+.|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000011110000 0111234568899999999999999999999874
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-30 Score=272.02 Aligned_cols=230 Identities=22% Similarity=0.319 Sum_probs=164.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
+.|.+.++||+|+||.||+++.. +++.||||.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56899999999999999999875 48899999987543 33567899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCC-cccccCHHHHHHHH----------------------hcccc---ccCCCceeceeeceeecCCCc
Q 003402 603 MVNKSLDVFLFDPT-KKHLLGWQLRVRII----------------------DGIAQ---DQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 603 ~~~gsL~~~l~~~~-~~~~l~~~~r~~i~----------------------~~ia~---d~~~~~KI~DFGla~~~~~~~ 656 (823)
+++|+|.+++.... ....+.+.....++ .||.. +.++.+||+|||+++.+....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99999998885321 11223333333322 23333 345789999999998765432
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
. .....||+.|+|||.+. +.++.++||||||+++|||++|+.|+...... ....... ....... .
T Consensus 182 ~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~--~~~~~~~-----~-- 246 (285)
T 3is5_A 182 H---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKAT--YKEPNYA-----V-- 246 (285)
T ss_dssp --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH--HCCCCCC-----C--
T ss_pred c---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhc--cCCcccc-----c--
Confidence 2 23467999999999875 57899999999999999999999998543211 1111100 0000000 0
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+....+.+++..||+.||++|||+.||++.
T Consensus 247 --~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 --ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred --ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001123467789999999999999999999863
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-30 Score=284.88 Aligned_cols=226 Identities=20% Similarity=0.196 Sum_probs=146.8
Q ss_pred eeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEEcccCCCc
Q 003402 531 SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYEYMVNKSL 608 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL 608 (823)
++||+|+||.||+|+.. +++.||||++... ....+.+|+.++.+++ ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 78999999999999875 4899999999643 3467889999999997 99999999999999999999999999999
Q ss_pred hhhccCCCcccccCHHHHHHHH----------------------hccccccC---CCceeceeeceeecCCCcccccccc
Q 003402 609 DVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQH---MNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 609 ~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~---~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
.+++.... .+.......++ .||..+.+ ..+||+|||+++....... ....
T Consensus 94 ~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~ 168 (325)
T 3kn6_A 94 FERIKKKK---HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKT 168 (325)
T ss_dssp HHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--cccc
Confidence 99986432 23333332222 23333333 3799999999987654322 2234
Q ss_pred ccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC--ccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTD--SFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
..||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... .......... ...+.. .. ......
T Consensus 169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-i~~~~~-~~-----~~~~~~ 241 (325)
T 3kn6_A 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK-IKKGDF-SF-----EGEAWK 241 (325)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH-HTTTCC-CC-----CSHHHH
T ss_pred cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH-HHcCCC-CC-----Cccccc
Confidence 67899999999999999999999999999999999999998643321 0111111111 111110 00 000001
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++..||+.||++|||+.|+++.
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 234568889999999999999999998764
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=281.80 Aligned_cols=238 Identities=19% Similarity=0.224 Sum_probs=163.5
Q ss_pred cCccee-eeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQ-SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~-~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
+.|.+. ++||+|+||.||+|+.. +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567774 78999999999999864 5899999999876556678899999999985 79999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCC---ceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMN---PKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~---~KI~DFGla~~~~~~~ 656 (823)
|+++|+|.+++.... .+.......++ .||..+.++. +||+|||+++.+....
T Consensus 92 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp CCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred cCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 999999999986432 12332222222 2333344444 8999999998664321
Q ss_pred c-----ccccccccccccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch---------hHH
Q 003402 657 L-----QGNTKRIVGTYGYMSPEYALE-----GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL---------LGH 717 (823)
Q Consensus 657 ~-----~~~~~~~~Gt~~YmAPE~~~~-----~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l---------~~~ 717 (823)
. ........||+.|+|||.+.. ..++.++|||||||++|||++|+.|+.......... ...
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 248 (316)
T 2ac3_A 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248 (316)
T ss_dssp -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence 1 112223569999999999875 568999999999999999999999986543221000 000
Q ss_pred HHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 718 AWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 718 ~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.. ...+.. . ......+.+++..||+.||++|||+.|+++.
T Consensus 249 ~~~~i~~~~~-~~~~~~-~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 249 LFESIQEGKY-EFPDKD-W----AHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHCCC-CCCHHH-H----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHhccCc-ccCchh-c----ccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000000 000000 0 0123568899999999999999999999884
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=274.19 Aligned_cols=226 Identities=23% Similarity=0.341 Sum_probs=164.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~----~~~~~ 597 (823)
+.|.+.++||+|+||.||+|... ++..||+|.+... .....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34788899999999999999875 4789999998743 34456789999999999999999999999876 35689
Q ss_pred EEEEcccCCCchhhccCCCcccccCHH------------------------HHHHHHhccccc-cCCCceeceeeceeec
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQ------------------------LRVRIIDGIAQD-QHMNPKISDFGMARMF 652 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~------------------------~r~~i~~~ia~d-~~~~~KI~DFGla~~~ 652 (823)
+||||+++|+|.+++..... +.+. |++..+.||..+ .++.+||+|||+++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHHccC---CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999999854211 2222 222222334444 6789999999999764
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
... ......||+.|+|||.+. +.++.++|||||||++|||++|+.|+....... .. ......+...
T Consensus 183 ~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~----~~~~~~~~~~---- 248 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QI----YRRVTSGVKP---- 248 (290)
T ss_dssp CTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HH----HHHHTTTCCC----
T ss_pred ccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH-HH----HHHHhccCCc----
Confidence 332 223457999999999876 569999999999999999999999985432211 11 1111111100
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
... +......+.+++..||+.||++|||+.|+++.
T Consensus 249 ~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 ASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGG----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccc----CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111 11123467889999999999999999999874
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=290.28 Aligned_cols=246 Identities=23% Similarity=0.305 Sum_probs=160.9
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCC--eE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQG--EK 596 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~--~~ 596 (823)
..++|++.++||+|+||.||+|... +++.||||++... .....+.+.+|+.++.++. |||||++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 3478999999999999999999865 5899999998643 3345567889999999997 999999999998654 78
Q ss_pred EEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc--
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE-- 656 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~-- 656 (823)
++|||||+ ++|..++...... |..++.||+..+.||+.+.++.+||+|||+|+.+....
T Consensus 87 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 165 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV 165 (388)
T ss_dssp EEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCC
T ss_pred EEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccc
Confidence 99999998 6888887542111 11111122223345566889999999999998764311
Q ss_pred -----------------cccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHH
Q 003402 657 -----------------LQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA 718 (823)
Q Consensus 657 -----------------~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~ 718 (823)
........+||+.|||||++.+ ..++.++|||||||++|||++|+.||..... ...+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i 243 (388)
T 3oz6_A 166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST--MNQLERI 243 (388)
T ss_dssp CCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH
T ss_pred cccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 0112234689999999999986 6799999999999999999999999854321 1111111
Q ss_pred HhhccCCc-----------------------------cccccCc---c-cccCCCHHHHHHHHHHHHHccccCcCCCCCH
Q 003402 719 WSLCKNDR-----------------------------AHELMDP---V-LQNEVSLPMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 719 ~~~~~~~~-----------------------------~~~l~d~---~-l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
........ ..++... . ............+.+++..||+.||++|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 11100000 0000000 0 0000001224568899999999999999999
Q ss_pred HHHHHH
Q 003402 766 SDVVSM 771 (823)
Q Consensus 766 ~evl~~ 771 (823)
.|+++.
T Consensus 324 ~e~l~H 329 (388)
T 3oz6_A 324 NDALKH 329 (388)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 999875
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=276.33 Aligned_cols=236 Identities=26% Similarity=0.374 Sum_probs=172.0
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcE--EEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQE--VAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~--VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.+.||+|+||.||+|+... +.. ||||.+... .....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 678999999999999999998754 554 599998753 233456799999999999 999999999999999999999
Q ss_pred EEcccCCCchhhccCCC-------------cccccCHHHHHHHH----------------------hccccccCCCceec
Q 003402 600 YEYMVNKSLDVFLFDPT-------------KKHLLGWQLRVRII----------------------DGIAQDQHMNPKIS 644 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~ 644 (823)
|||+++|+|.+++.... ....+.+.....++ .||..+.++.+||+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence 99999999999997543 11234444333333 23444778899999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhcc
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
|||+++.... ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.|+...... .+. ....
T Consensus 185 Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~----~~~~ 255 (327)
T 1fvr_A 185 DFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELY----EKLP 255 (327)
T ss_dssp CTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH----HHGG
T ss_pred ccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--HHH----HHhh
Confidence 9999985322 112233467899999999998889999999999999999998 99987533211 111 1111
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCC
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 778 (823)
.+ .....+......+.+++..||+.||++||++.++++.|+..+..
T Consensus 256 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 256 QG---------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp GT---------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cC---------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11 00111223345688899999999999999999999999876543
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-30 Score=282.25 Aligned_cols=236 Identities=18% Similarity=0.251 Sum_probs=172.6
Q ss_pred HHHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhc-CCCceeeEE
Q 003402 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--------QGLKEFKNEMMLIAKL-QHRNLVRLL 587 (823)
Q Consensus 518 ~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--------~~~~~f~~Ev~~l~~l-~H~Niv~l~ 587 (823)
.......++|++.+.||+|+||.||+|+.. +|+.||||.++.... ...+.+.+|+.++.++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334445577999999999999999999986 689999999864321 1245688999999999 799999999
Q ss_pred eEEEeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceece
Q 003402 588 GCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISD 645 (823)
Q Consensus 588 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~D 645 (823)
+++......++||||+++++|.+++.... .+.+.....+ +.||..+.++.+||+|
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEe
Confidence 99999999999999999999999886421 2333332222 2344457889999999
Q ss_pred eeceeecCCCccccccccccccccccccccccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH
Q 003402 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYALE------GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719 (823)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~------~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~ 719 (823)
||+++.+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.|+..... ........
T Consensus 244 fG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~i~ 318 (365)
T 2y7j_A 244 FGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILMLRMIM 318 (365)
T ss_dssp CTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred cCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHH
Confidence 99998875432 2234689999999999863 3689999999999999999999999853211 11111110
Q ss_pred hhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 720 ~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.. ....+.. ......+.+++..||+.||++||++.++++.
T Consensus 319 ----~~~~-~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 319 ----EGQY-QFSSPEW-----DDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp ----HTCC-CCCHHHH-----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ----hCCC-CCCCccc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 0000000 0123457889999999999999999999874
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=269.52 Aligned_cols=224 Identities=19% Similarity=0.252 Sum_probs=166.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV 599 (823)
.++|++.++||+|+||.||+|+.. +++.||||.+... ......++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467999999999999999999876 5899999998753 234457889999999999 999999999999999999999
Q ss_pred EEcccCCCchhhccCCCc-ccccCHHHHHHHHh----------------------ccccc-------------------c
Q 003402 600 YEYMVNKSLDVFLFDPTK-KHLLGWQLRVRIID----------------------GIAQD-------------------Q 637 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~-~~~l~~~~r~~i~~----------------------~ia~d-------------------~ 637 (823)
|||+++++|.+++..... ...+.+.....++. ||..+ .
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 999999999999864211 12233333333322 23333 4
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~ 716 (823)
...+||+|||+++...... ...||+.|+|||.+.+. .++.++|||||||++|||++|++++... ..
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~-- 236 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG-----DQ-- 236 (289)
T ss_dssp CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-----HH--
T ss_pred ceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-----hH--
Confidence 4578999999998765432 24699999999999876 5678999999999999999998765211 11
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.....+... ..+......+.+++..||+.||++|||+.|+++.
T Consensus 237 --~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 --WHEIRQGRLP---------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp --HHHHHTTCCC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --HHHHHcCCCC---------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111111111 1112234567889999999999999999998874
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=283.59 Aligned_cols=240 Identities=20% Similarity=0.248 Sum_probs=162.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhh-HHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~-~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|.+.++||+|+||.||+|+.. +++.||||++....... ...+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999876 58899999997543221 22466899999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
++ |+|.+++..... .+....... .+.||..+.++.+||+|||+++...... ..
T Consensus 82 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KT 156 (324)
T ss_dssp CS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred cc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--cc
Confidence 98 588887754322 122222222 2234555788999999999998654322 12
Q ss_pred cccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---ccccccCc---
Q 003402 661 TKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---RAHELMDP--- 733 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---~~~~l~d~--- 733 (823)
.....||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+..... .............. ........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV--EEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 234578999999999876 5689999999999999999999999854322 11222221111110 00111000
Q ss_pred ------cccc----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 ------VLQN----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ------~l~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.... .........+.+++..||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 0011224567889999999999999999999884
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-30 Score=285.28 Aligned_cols=232 Identities=21% Similarity=0.271 Sum_probs=170.5
Q ss_pred cCcceeeeeccccceeEEeeee----cCCcEEEEEEeccCC----hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~----~~~~~VAVK~l~~~~----~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~ 595 (823)
++|++.++||+|+||.||+++. .+++.||||+++... ....+.+.+|++++.++ +||||+++++++.+.+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 6799999999999999999987 368899999987432 23345688899999999 69999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHHH----------------------HHHHhccccccCCCceeceeeceeecC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
.++||||+++|+|.+++..... +..... +..+.||+.+.++.+||+|||+++.+.
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999999864221 222222 222345555788999999999998764
Q ss_pred CCccccccccccccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
.... .......||+.|||||++.+ ..++.++|||||||++|||++|+.|+....... ............
T Consensus 211 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~------- 281 (355)
T 1vzo_A 211 ADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKS------- 281 (355)
T ss_dssp GGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHHC-------
T ss_pred cCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhcc-------
Confidence 4332 22334689999999999986 347899999999999999999999986433221 111111111110
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCC-----CHHHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRP-----TMSDVVSMI 772 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~L 772 (823)
....+......+.+++..||+.||++|| ++.|+++..
T Consensus 282 ----~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 ----EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0112223345678899999999999999 999998764
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-30 Score=294.67 Aligned_cols=232 Identities=19% Similarity=0.267 Sum_probs=173.7
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.++||+|+||.||+++.. +++.||||++.+.. ....+.+.+|+.++.+++|||||++++++.+.+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 67899999999999999999985 58999999996532 234567899999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCc-ccccCHHHHH----------------------HHHhccccccCCCceeceeeceeecCCCcc
Q 003402 601 EYMVNKSLDVFLFDPTK-KHLLGWQLRV----------------------RIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~-~~~l~~~~r~----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||+++|+|..++..... ...+...... ..+.||+.+.++.+||+|||+++.+.....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 99999999998865321 1123332222 223455558899999999999998754332
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.....+||+.|||||++.+..++.++|||||||++|||++|+.||....... ............ . .
T Consensus 345 --~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~~~-~----------~ 410 (543)
T 3c4z_A 345 --KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVLEQ-A----------V 410 (543)
T ss_dssp --CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHHHC-C----------C
T ss_pred --ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHhhc-c----------c
Confidence 2334689999999999999999999999999999999999999986432211 111111111100 0 0
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCH-----HHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTM-----SDVVS 770 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~ 770 (823)
..+......+.+++..||+.||++||++ .+|++
T Consensus 411 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1222334567889999999999999976 56654
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-30 Score=274.64 Aligned_cols=232 Identities=21% Similarity=0.378 Sum_probs=166.8
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
..+.|++.+.||+|+||.||+|+... ++.||+|.+........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 34679999999999999999999864 88999999987666677899999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|..++..... .+.+.....++ .||..+.++.+||+|||++...... ..
T Consensus 97 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HH
T ss_pred eCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cc
Confidence 9999999998754211 13333332222 3344477889999999998643211 11
Q ss_pred ccccccccccccccccc-----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 660 NTKRIVGTYGYMSPEYA-----LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~-----~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
......||+.|+|||++ ....++.++||||||+++|||++|+.|+...... .. ......... ....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~---~~~~~~~~~-~~~~--- 243 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RV---LLKIAKSDP-PTLL--- 243 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HH---HHHHHHSCC-CCCS---
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--HH---HHHHhccCC-cccC---
Confidence 12335799999999998 4677899999999999999999999997543211 11 111111110 0110
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++..||+.||++|||+.++++.
T Consensus 244 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 244 ----TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ----SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ----CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 112234567889999999999999999998763
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-30 Score=283.56 Aligned_cols=232 Identities=13% Similarity=0.115 Sum_probs=172.6
Q ss_pred HHhcCcceeeeeccccceeEEeee------ecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC---CCceeeEEeEEEe
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGR------LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ---HRNLVRLLGCCIE 592 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~------~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~---H~Niv~l~g~~~~ 592 (823)
...++|.+.++||+|+||.||+|+ ...++.||||+++.. ...++..|++++.+++ |+||+++++++.+
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345779999999999999999994 345889999999754 3467888888888887 9999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCC--cccccCHHHHHHHH----------------------hcccccc-----------
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPT--KKHLLGWQLRVRII----------------------DGIAQDQ----------- 637 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~--~~~~l~~~~r~~i~----------------------~~ia~d~----------- 637 (823)
.+..+|||||+++|+|.+++.... ....+.+.....++ .||+.+.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccc
Confidence 999999999999999999985311 11224444333333 3444466
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGH 717 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~ 717 (823)
++.+||+|||+|+.+............+||+.|||||++.+..++.++|||||||++|||+||+.|+.......
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------ 292 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------ 292 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE------
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc------
Confidence 78999999999987643322233445689999999999999999999999999999999999999973221110
Q ss_pred HHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCC-CCHHHHHHHHhccc
Q 003402 718 AWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDR-PTMSDVVSMINNEL 776 (823)
Q Consensus 718 ~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~R-Pt~~evl~~L~~~~ 776 (823)
..++..+... .....+.+++..|++.+|.+| |++.++.+.|+..+
T Consensus 293 -----------~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 293 -----------CKPEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp -----------EEECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred -----------eeechhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 0011111111 123456678888999999988 78888888887754
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=275.27 Aligned_cols=241 Identities=16% Similarity=0.247 Sum_probs=170.3
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEe--CCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIE--QGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~--~~~~~lV~ 600 (823)
++|++.++||+|+||.||+|+. .+++.||||.++.. ..+.+.+|+.++.+++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6799999999999999999986 45899999999753 3477999999999997 9999999999998 67889999
Q ss_pred EcccCCCchhhccCCCcccc----------------cCHHHHHHHHhccccccCC-CceeceeeceeecCCCcccccccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHL----------------LGWQLRVRIIDGIAQDQHM-NPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~----------------l~~~~r~~i~~~ia~d~~~-~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
||+++++|..++........ .++.|++..+.||+.+.++ .+||+|||+++....... ...
T Consensus 113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~ 189 (330)
T 3nsz_A 113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---YNV 189 (330)
T ss_dssp ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCS
T ss_pred eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc---ccc
Confidence 99999999998854221111 1111122223344446555 899999999997654332 234
Q ss_pred ccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhh--------ccCC---------
Q 003402 664 IVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL--------CKND--------- 725 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~--------~~~~--------- 725 (823)
..||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+.........+....... ....
T Consensus 190 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (330)
T 3nsz_A 190 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 269 (330)
T ss_dssp CCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHH
T ss_pred ccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchh
Confidence 579999999999887 6789999999999999999999999854332211111111000 0000
Q ss_pred -----ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 -----RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 -----~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+..............+.+++..||+.||++|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 270 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000001111111122245678899999999999999999999874
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-30 Score=273.89 Aligned_cols=226 Identities=19% Similarity=0.237 Sum_probs=171.9
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.+.||+|+||.||+++..+ ++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 568899999999999999998864 789999998653 2344577999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++++|.+++.... .+.+.....++ .||..+.++.+||+|||+++.......
T Consensus 95 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 170 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 170 (294)
T ss_dssp ECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc-
Confidence 9999999999875322 23333332222 334447788999999999987643321
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... ...... ..... .
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~-~~~~~----------~ 233 (294)
T 2rku_A 171 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLRI-KKNEY----------S 233 (294)
T ss_dssp -CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHH-HTTCC----------C
T ss_pred -ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH-hhccC----------C
Confidence 223467999999999999999999999999999999999999998543211 111111 11100 1
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++..||+.||++||++.|+++.
T Consensus 234 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 234 IPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111223467789999999999999999999875
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-30 Score=274.31 Aligned_cols=244 Identities=20% Similarity=0.318 Sum_probs=155.1
Q ss_pred HHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
...++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+++.+|+.++.+++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34578999999999999999999865 58899999986532 33456789999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCC-----CcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeec
Q 003402 600 YEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~-----~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~ 652 (823)
|||+++++|.+++... .....+.+.....++ .||..+.++.+||+|||+++.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 9999999999988531 111224444333332 2333467889999999999876
Q ss_pred CCCcc---ccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 653 GGDEL---QGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 653 ~~~~~---~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
..... ........||+.|+|||.+.. ..++.++||||||+++|||++|+.|+....... ..... ... ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~---~~~-~~~ 245 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--VLMLT---LQN-DPP 245 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HHHHH---HTS-SCC
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--HHHHH---hcc-CCC
Confidence 43211 112234579999999999875 568999999999999999999999986443221 11111 111 111
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+................+.+++..||+.||++||++.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp CTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1111111111112233567889999999999999999999873
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-30 Score=280.59 Aligned_cols=242 Identities=20% Similarity=0.255 Sum_probs=160.7
Q ss_pred HHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~--~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
...++|++.++||+|+||.||+|+.. +++.||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34578999999999999999999865 588999999975432 234578899999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHH----------------------Hhcccc-----ccCCCceeceeeceee
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQ-----DQHMNPKISDFGMARM 651 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~-----d~~~~~KI~DFGla~~ 651 (823)
||||++ |+|.+++..... +.+.....+ +.||+. +.++.+||+|||+++.
T Consensus 111 v~e~~~-~~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999998 589888854322 233322222 233443 3445599999999987
Q ss_pred cCCCccccccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---c-
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND---R- 726 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~---~- 726 (823)
+..... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.|+..... .............. .
T Consensus 187 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 187 FGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE--IDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCTTTS
T ss_pred cCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH--HHHHHHHHHHhCCCchhhh
Confidence 643321 223457899999999998754 89999999999999999999999854321 11111111110000 0
Q ss_pred ------------cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 ------------AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ------------~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+.....+...........+.+++..||+.||++|||+.|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000000000111133567899999999999999999999874
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-30 Score=293.48 Aligned_cols=242 Identities=21% Similarity=0.201 Sum_probs=164.3
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------C
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------G 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~ 594 (823)
.++|++.++||+|+||+||+|+.. +++.||||++... .....+++.+|+.+++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 367999999999999999999865 4889999999754 334567899999999999999999999999654 4
Q ss_pred eEEEEEEcccCCCchhhccCCCc-c----------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTK-K----------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~-~----------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+.+||||||+++ |...+...-. . |..++.||+..+.||+.+.++.+||+|||+|+......
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 218 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF- 218 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC-
T ss_pred eEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc-
Confidence 689999999875 4444432110 0 11122233333456666889999999999998764432
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC-------------
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN------------- 724 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~------------- 724 (823)
.....+||+.|+|||++.+..|+.++|||||||++|||++|+.||..... ...+.........
T Consensus 219 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~--~~~~~~i~~~lg~p~~~~~~~~~~~~ 294 (464)
T 3ttj_A 219 --MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY--IDQWNKVIEQLGTPCPEFMKKLQPTV 294 (464)
T ss_dssp --CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred --ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHHHcchhh
Confidence 23446899999999999999999999999999999999999999854321 1111111110000
Q ss_pred ------C-cc-----ccccCccccc---CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 ------D-RA-----HELMDPVLQN---EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ------~-~~-----~~l~d~~l~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. .. .......+.. .........+.+++..||+.||++|||+.|+++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00 0000000000 0001125678999999999999999999999875
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=277.95 Aligned_cols=245 Identities=21% Similarity=0.245 Sum_probs=165.3
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChh-----hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ-----GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~-----~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
..++|++.+.||+|+||.||+|+.. +++.||||.+...... ..+.+.+|+.++.+++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4478999999999999999999875 4899999998743211 124688999999999999999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcccc--------------------cCHHHHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHL--------------------LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~--------------------l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
++||||+++ +|..++......-. .++.|++..+.||..+.++.+||+|||+++.+....
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 999999986 78887765321100 111112222345555788999999999998764332
Q ss_pred cccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc---cc---c
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR---AH---E 729 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~---~~---~ 729 (823)
.......||+.|+|||.+.+. .++.++|||||||++|||++|.+|+.... ....+........... .. .
T Consensus 167 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 167 --RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS--DLDQLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp --CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred --ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHcCCCChhhhhhhcc
Confidence 122346799999999999764 58999999999999999999998874322 1111111111111000 00 0
Q ss_pred ccCccc---ccCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 003402 730 LMDPVL---QNEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772 (823)
Q Consensus 730 l~d~~l---~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L 772 (823)
+.+... ....+ ......+.+++..||+.||++|||+.|++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000000 00011 12246788999999999999999999999864
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=265.39 Aligned_cols=229 Identities=20% Similarity=0.244 Sum_probs=167.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
++|++.+.||+|+||.||+++.. +++.||||.+..... ...++|.+|+.++.+++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56899999999999999999886 589999999865321 23678999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCC----Cceeceeeceee
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHM----NPKISDFGMARM 651 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~----~~KI~DFGla~~ 651 (823)
+||||+++++|.+++.... .+.+.....++. ||..+.++ .+||+|||+++.
T Consensus 85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999985421 233333333332 23334444 799999999987
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.|+..... ...... . .... ...
T Consensus 162 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~---~-~~~~--~~~ 230 (283)
T 3bhy_A 162 IEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--QETLTN---I-SAVN--YDF 230 (283)
T ss_dssp CC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHH---H-HTTC--CCC
T ss_pred ccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--HHHHHH---h-Hhcc--cCC
Confidence 64432 12345799999999999999999999999999999999999999753221 111111 0 0000 000
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
++... ......+.+++..||+.||++||++.++++.
T Consensus 231 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 231 DEEYF----SNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CHHHH----TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred cchhc----ccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 01100 1123467889999999999999999999873
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-30 Score=281.65 Aligned_cols=229 Identities=16% Similarity=0.208 Sum_probs=167.1
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.+.||+|+||.||+++.. +++.||||.+++... .+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467999999999999999999876 488999999976432 245688888888 79999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHH----------------------Hhcccc-ccC---CCceeceeeceeecCCC
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQ-DQH---MNPKISDFGMARMFGGD 655 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~-d~~---~~~KI~DFGla~~~~~~ 655 (823)
|+++|+|.+++..... +.......+ +.||+. +.+ ..+||+|||+++.+...
T Consensus 97 ~~~gg~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 97 LMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp CCCSCBHHHHHHTCTT---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred CCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 9999999998865322 222222222 223332 222 34999999999976543
Q ss_pred ccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc-cchhHHHHhhccCCccccccCcc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS-FNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~-~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.. ......||+.|||||++.+..++.++|||||||++|||++|+.||.....+. ..+... . ..+.. .
T Consensus 174 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~---i-~~~~~-~----- 241 (342)
T 2qr7_A 174 NG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR---I-GSGKF-S----- 241 (342)
T ss_dssp TC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHH---H-HHCCC-C-----
T ss_pred CC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHH---H-ccCCc-c-----
Confidence 21 2334689999999999988889999999999999999999999986432221 111111 1 11110 0
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+...........+.+++..||+.||++||++.++++.
T Consensus 242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111112334567889999999999999999999874
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-29 Score=269.14 Aligned_cols=242 Identities=23% Similarity=0.311 Sum_probs=167.5
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhcC---CCceeeEEeEEEeC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-----GQGLKEFKNEMMLIAKLQ---HRNLVRLLGCCIEQ 593 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-----~~~~~~f~~Ev~~l~~l~---H~Niv~l~g~~~~~ 593 (823)
..++|++.++||+|+||+||+|+.. +++.||||++.... ......+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3578999999999999999999864 58999999986322 112356777887777664 99999999999886
Q ss_pred C-----eEEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceecee
Q 003402 594 G-----EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDF 646 (823)
Q Consensus 594 ~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DF 646 (823)
. ..++||||+. |+|.+++...... .+.+.....++ .||..+.++.+||+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 5 5899999997 6999988654321 13343333332 3444478889999999
Q ss_pred eceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC--
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN-- 724 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~-- 724 (823)
|+++...... ......||+.|||||.+.+..++.++|||||||++|||++|+.|+..... .............
T Consensus 165 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 165 GLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE--ADQLGKIFDLIGLPP 239 (308)
T ss_dssp SCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH--HHHHHHHHHHHCCCC
T ss_pred ccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCC
Confidence 9998764332 23446899999999999999999999999999999999999999854322 1111111111110
Q ss_pred -Ccccc---ccCccccc-------CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 -DRAHE---LMDPVLQN-------EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 -~~~~~---l~d~~l~~-------~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..... +....... .........+.+++..||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000 00000000 0111234567889999999999999999998874
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-30 Score=270.50 Aligned_cols=225 Identities=21% Similarity=0.341 Sum_probs=162.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|.+.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 67999999999999999999876 58999999986432 234568999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++++|.+++..... +.......++ .||..+.++.+||+|||+++.......
T Consensus 91 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 166 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF- 166 (276)
T ss_dssp ECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc-
Confidence 99999999999854221 2232222222 234447788999999999987654322
Q ss_pred cccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.....||+.|+|||.+.+..+ +.++||||||+++|||++|+.|+..... ..+... ...+..
T Consensus 167 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~----~~~~~~---------- 228 (276)
T 2h6d_A 167 --LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKK----IRGGVF---------- 228 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH----HHHCCC----------
T ss_pred --eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHH----hhcCcc----------
Confidence 223579999999999988776 6899999999999999999999753211 111111 111100
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++..||+.||++||++.++++.
T Consensus 229 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0111223467789999999999999999999885
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-30 Score=272.07 Aligned_cols=224 Identities=19% Similarity=0.222 Sum_probs=170.4
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||+|+... ++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 679999999999999999998764 7899999986431 223567999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
||+++|+|.+++.... .+.......+ +.||..+.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred EeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 9999999999885422 1222222222 234444778899999999998764322
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... .. ....... . ..
T Consensus 169 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~---~~~~~~~-~----------~~ 230 (284)
T 2vgo_A 169 --RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ET---HRRIVNV-D----------LK 230 (284)
T ss_dssp --BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HH---HHHHHTT-C----------CC
T ss_pred --cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HH---HHHHhcc-c----------cC
Confidence 23467999999999999999999999999999999999999998533211 11 1111110 0 01
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++..||+.||++||++.++++.
T Consensus 231 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 231 FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 112234567889999999999999999999873
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=274.71 Aligned_cols=239 Identities=22% Similarity=0.277 Sum_probs=167.3
Q ss_pred ccHHHHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcC--CCceeeEEeEE
Q 003402 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQ--HRNLVRLLGCC 590 (823)
Q Consensus 515 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~--H~Niv~l~g~~ 590 (823)
+.+.++....++|++.+.||+|+||.||+++..+++.||||.+... .....+.+.+|+.++.+++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3344444556789999999999999999999888999999998643 3445678999999999997 59999999999
Q ss_pred EeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCCCceeceeec
Q 003402 591 IEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGM 648 (823)
Q Consensus 591 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGl 648 (823)
.+.+..++||| +.+++|.+++.... .+.+..+..++. ||..+ ++.+||+|||+
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~ 172 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 172 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccc
Confidence 99999999999 66889999986432 233333333222 22223 47799999999
Q ss_pred eeecCCCccccccccccccccccccccccC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHH
Q 003402 649 ARMFGGDELQGNTKRIVGTYGYMSPEYALE-----------GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGH 717 (823)
Q Consensus 649 a~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-----------~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~ 717 (823)
++.+.............||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+....... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~ 248 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI----SK 248 (313)
T ss_dssp SCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH----HH
T ss_pred cccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH----HH
Confidence 987754433333344679999999999875 478999999999999999999999985332211 11
Q ss_pred HHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 718 AWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 718 ~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..... ++......+......+.+++..||+.||++||++.|+++.
T Consensus 249 ~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 249 LHAII---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHH---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHH---------hcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111 1111111111223567889999999999999999999875
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=277.72 Aligned_cols=242 Identities=21% Similarity=0.273 Sum_probs=166.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--------C
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--------Q 593 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--------~ 593 (823)
++|++.++||+|+||.||+|+.. +++.||||++.... ......+.+|+.++.+++||||+++++++.+ .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 67999999999999999999874 58999999986432 2234678899999999999999999999987 4
Q ss_pred CeEEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceee
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~ 651 (823)
+..++||||+++ +|...+..... .+.+.....+ +.||..+.++.+||+|||+++.
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred ceEEEEEeccCC-CHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 578999999985 66666543321 1333332222 2345557889999999999987
Q ss_pred cCCCcc--ccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc--
Q 003402 652 FGGDEL--QGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR-- 726 (823)
Q Consensus 652 ~~~~~~--~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~-- 726 (823)
+..... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+...... ..............
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLCGSITPE 251 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTT
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCChh
Confidence 653221 122334678999999999876 45899999999999999999999998543221 11111111111000
Q ss_pred -cc-----cccCc---ccccCCCHH-------HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 -AH-----ELMDP---VLQNEVSLP-------MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 -~~-----~l~d~---~l~~~~~~~-------~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. +..+. ......... ....+.+++..||+.||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00 00000 000000111 12347889999999999999999999885
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=292.95 Aligned_cols=228 Identities=21% Similarity=0.261 Sum_probs=167.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||+||+++.. +++.||||++... .....+.+.+|+.++++++|||||++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 66999999999999999999875 5899999998643 22346789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHH----------------------HHHHhcccc---ccCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQ---DQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~---d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+++|+|.+++..... +..... +..+.||+. +.++.+||+|||+++.+....
T Consensus 102 ~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 102 LYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp CCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 9999999887753221 222222 222234444 345679999999998764432
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
......||+.|||||++.+ .++.++|||||||++|||++|+.|+..... ..+..... .+... ...+
T Consensus 179 ---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~----~~~~~-~~~~--- 244 (486)
T 3mwu_A 179 ---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVE----TGKYA-FDLP--- 244 (486)
T ss_dssp ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH----HTCCC-SCSG---
T ss_pred ---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH----hCCCC-CCCc---
Confidence 2234579999999999875 599999999999999999999999853221 11111111 11000 0000
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........+.+++..||+.||++|||+.++++.
T Consensus 245 --~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 245 --QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 011234567889999999999999999999985
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=272.46 Aligned_cols=229 Identities=18% Similarity=0.198 Sum_probs=165.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC----hhhHHHHHHHHHHHHhcCCCceeeEEeEEE--eCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKLQHRNLVRLLGCCI--EQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~----~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~--~~~~~~ 597 (823)
++|.+.+.||+|+||.||++... +++.||||.+.... ....+.+.+|+.++++++||||+++++++. +.+..+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 67999999999999999999875 47899999997532 234578999999999999999999999985 456889
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||++++ |.+++..... ..+.+.....++ .||..+.++.+||+|||+++.....
T Consensus 85 lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTT-CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEehhccCC-HHHHHHhCcc-cccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 999999987 6555543211 123333332222 3444478889999999999987543
Q ss_pred ccccccccccccccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~~--~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
..........||+.|+|||.+.+.. ++.++||||||+++|||++|+.|+..... ..... .. ..+..
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~---~i-~~~~~------ 230 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFE---NI-GKGSY------ 230 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHH---HH-HHCCC------
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHH---HH-hcCCC------
Confidence 3333334567999999999987644 47899999999999999999999853211 11111 11 11100
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+......+.+++..||+.||++||++.|+++.
T Consensus 231 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1112234567789999999999999999999975
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-30 Score=304.68 Aligned_cols=236 Identities=21% Similarity=0.292 Sum_probs=172.3
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
....++|++.+.||+|+||.||+|++.. +..||||.+.... ....+.|.+|+.++++++|||||++++++. .+.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 3445779999999999999999998743 4679999987543 344578999999999999999999999985 566
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
.++||||+++|+|.+++..... .+.+..+..+ +.||+.+.++.+||+|||+++.+.
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred eEEEEEcCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 8999999999999999864321 2333333222 334555788999999999998765
Q ss_pred CCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
..... ......||+.|||||.+....++.++|||||||++|||++ |+.|+..... ....... .....
T Consensus 543 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~~i---~~~~~------ 610 (656)
T 2j0j_A 543 DSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRI---ENGER------ 610 (656)
T ss_dssp C-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH---HHTCC------
T ss_pred CCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH---HcCCC------
Confidence 43322 2233567889999999999999999999999999999997 8888753221 1111111 11100
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+......+.+++..||+.||++||++.+|+++|+..
T Consensus 611 ----~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 611 ----LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 011223345788899999999999999999999999765
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-30 Score=294.04 Aligned_cols=229 Identities=22% Similarity=0.281 Sum_probs=171.0
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
.+.|++.++||+|+||.||+++.. +++.||||++.... ....+.+.+|+.++++++|||||++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356999999999999999999876 58999999986432 34567899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhcccc---ccCCCceeceeeceeecCC
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQ---DQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~---d~~~~~KI~DFGla~~~~~ 654 (823)
|||+.+|+|.+++..... +.+..... .+.||+. +.++.+||+|||+++.+..
T Consensus 105 ~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp ECCCCSCBHHHHHHTCSC---CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999999988864322 22222222 2234444 4577899999999987654
Q ss_pred CccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.. ......||+.|||||++.+ .++.++|||||||++|||++|+.|+..... ..+..... . +... ...+
T Consensus 182 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~---~-~~~~-~~~~- 249 (484)
T 3nyv_A 182 SK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKVE---K-GKYT-FELP- 249 (484)
T ss_dssp CC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH---H-CCCC-CCSG-
T ss_pred cc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH---c-CCCC-CCCc-
Confidence 32 2334679999999998865 699999999999999999999999853321 11111111 1 1000 0000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........+.+++..||+.||++|||+.|+++.
T Consensus 250 ----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 ----QWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ----GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 011234567889999999999999999999874
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-30 Score=276.81 Aligned_cols=235 Identities=24% Similarity=0.313 Sum_probs=164.3
Q ss_pred hcCcceeeeeccccceeEEeeeecC--Cc--EEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN--GQ--EVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~--~~--~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~ 596 (823)
.++|++.++||+|+||.||+|++.. ++ .||||.++.. .....++|.+|+.++.+++||||+++++++.+.. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 3679999999999999999998642 33 6999998753 2345678999999999999999999999998765 8
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++|+||+++++|.+++.... ..+.+.....++ .||..+.++.+||+|||+++.+..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 89999999999999886421 123333332222 334447788999999999988754
Q ss_pred Cccc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 655 DELQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 655 ~~~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
.... .......||+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... ... .........
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~---~~~~~~~~~----- 243 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QIL---HKIDKEGER----- 243 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH---HHHHTSCCC-----
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHH---HHHHccCCC-----
Confidence 4321 22334568889999999998889999999999999999999 89887533211 111 111111100
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+......+.+++..||+.||++||++.++++.|+..
T Consensus 244 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 244 ----LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 011122345688899999999999999999999999876
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=292.52 Aligned_cols=229 Identities=22% Similarity=0.285 Sum_probs=166.1
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCCh-------------hhHHHHHHHHHHHHhcCCCceeeEEeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG-------------QGLKEFKNEMMLIAKLQHRNLVRLLGC 589 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~-------------~~~~~f~~Ev~~l~~l~H~Niv~l~g~ 589 (823)
.+.|.+.++||+|+||+||+|+... ++.||||.+..... ...+++.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 4779999999999999999998764 78999999875321 235679999999999999999999999
Q ss_pred EEeCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccC---CCceec
Q 003402 590 CIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQH---MNPKIS 644 (823)
Q Consensus 590 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~---~~~KI~ 644 (823)
+.+.+..++||||+++|+|.+++.... .+.+.....++ .||+.+.+ ..+||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999999988875422 23333333322 23333433 369999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
|||+++...... ......||+.|+|||++. +.++.++|||||||++|||++|+.|+..... ..+.... ..
T Consensus 192 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i----~~ 261 (504)
T 3q5i_A 192 DFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDIIKKV----EK 261 (504)
T ss_dssp CCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH
T ss_pred ECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----Hc
Confidence 999999875432 223467999999999876 5699999999999999999999999854321 1111111 01
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+... .+.... ......+.+++..||+.||.+|||+.|+++.
T Consensus 262 ~~~~--~~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYY--FDFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCC--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCC--CCcccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1000 000000 1123568889999999999999999999874
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-30 Score=280.55 Aligned_cols=237 Identities=22% Similarity=0.321 Sum_probs=171.7
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChh-----------------hHHHHHHHHHHHHhcCCCceeeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ-----------------GLKEFKNEMMLIAKLQHRNLVRL 586 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~-----------------~~~~f~~Ev~~l~~l~H~Niv~l 586 (823)
.++|.+.+.||+|+||.||+|+. +++.||||.+...... ..+.|.+|+.++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36799999999999999999999 8999999998643211 12789999999999999999999
Q ss_pred EeEEEeCCeEEEEEEcccCCCchhh------ccCCCcccccCHHHHHHHH-----------------------hcccccc
Q 003402 587 LGCCIEQGEKILIYEYMVNKSLDVF------LFDPTKKHLLGWQLRVRII-----------------------DGIAQDQ 637 (823)
Q Consensus 587 ~g~~~~~~~~~lV~Ey~~~gsL~~~------l~~~~~~~~l~~~~r~~i~-----------------------~~ia~d~ 637 (823)
++++.+.+..++||||+++|+|.++ +.... ...+.+.....++ .||..+.
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK 187 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC
Confidence 9999999999999999999999998 44311 2233443333222 2333467
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCC-CCCc-hhhHHHHHHHHHHHHhCCCCCCCCCCCccchh
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG-VFSV-KSDVFSFGVLMLEILSSKKNTGVYNTDSFNLL 715 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~-~~s~-ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~ 715 (823)
++.+||+|||+++..... ......||+.|+|||.+.+. .++. ++||||||+++|||++|+.|+...... ..+.
T Consensus 188 ~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHH
T ss_pred CCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHH
Confidence 889999999999876443 23346799999999999887 6776 999999999999999999998643321 1111
Q ss_pred HHHHhhccCCcc--c----cccCcccc---cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 716 GHAWSLCKNDRA--H----ELMDPVLQ---NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 716 ~~~~~~~~~~~~--~----~l~d~~l~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
... ..+.. . ....+... ..........+.+++..||+.||++||++.|+++.
T Consensus 263 ~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNI----RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHH----TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHH----hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 11110 0 00000000 00112234568889999999999999999999874
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=293.61 Aligned_cols=228 Identities=20% Similarity=0.248 Sum_probs=163.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
+.|++.++||+|+||+||+|+.. +++.||||.+.... ....+.+.+|+.++++++|||||++++++.+.+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 56999999999999999999876 58899999997542 3345789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHH----------------------HHhcccccc---CCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQ---HMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~---~~~~KI~DFGla~~~~~~~ 656 (823)
|+++|+|.+++..... +....... .+.||+.+. ++.+||+|||+++......
T Consensus 117 ~~~~g~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~ 193 (494)
T 3lij_A 117 CYKGGELFDEIIHRMK---FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193 (494)
T ss_dssp CCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred cCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence 9999999887753221 22222222 223333333 4569999999998875432
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
......||+.|||||++. ..++.++|||||||++|||++|+.|+..... ..+..... .+.. ....+..
T Consensus 194 ---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~----~~~~-~~~~~~~- 261 (494)
T 3lij_A 194 ---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRKVE----KGKY-TFDSPEW- 261 (494)
T ss_dssp ---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH----HTCC-CCCSGGG-
T ss_pred ---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH----hCCC-CCCchhc-
Confidence 233467999999999876 5799999999999999999999999854321 11111111 1100 0000110
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+.+++..||+.||++|||+.|+++.
T Consensus 262 ----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 262 ----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1223567889999999999999999999863
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=287.07 Aligned_cols=176 Identities=23% Similarity=0.338 Sum_probs=135.6
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~~ 596 (823)
++|.+.++||+|+||.||+|+... ++.||||++... .....+.+.+|++++.+++|||||++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 689999999999999999998754 789999999753 334457899999999999999999999999876 679
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++||||+. |+|.+++..... +.+.+... .+.||+.+.++.+||+|||+|+....
T Consensus 106 ~lv~e~~~-~~L~~~~~~~~~---l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTPIF---LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999997 599998865321 23332222 23455568889999999999998754
Q ss_pred Cccc--------------------cccccccccccccccccc-cCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 003402 655 DELQ--------------------GNTKRIVGTYGYMSPEYA-LEGVFSVKSDVFSFGVLMLEILSSKKNT 704 (823)
Q Consensus 655 ~~~~--------------------~~~~~~~Gt~~YmAPE~~-~~~~~s~ksDVwSfGvvl~Elltg~~p~ 704 (823)
.... ......+||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 3211 123457899999999986 4566999999999999999999865554
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=287.82 Aligned_cols=176 Identities=23% Similarity=0.329 Sum_probs=124.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~~ 596 (823)
++|++.++||+|+||+||+|+.. +++.||||++... .....+++.+|++++.+++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 67999999999999999999865 5889999999653 334457899999999999999999999999543 579
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
++||||+. ++|..++...... |..++.||+.++.||+.+.++.+||+|||+|+.+.....
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 211 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTT
T ss_pred EEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccc
Confidence 99999984 7888887643211 111222233334566668899999999999997643211
Q ss_pred c-------------------------cccccccccccccccccc-cCCCCCchhhHHHHHHHHHHHHhCC
Q 003402 658 Q-------------------------GNTKRIVGTYGYMSPEYA-LEGVFSVKSDVFSFGVLMLEILSSK 701 (823)
Q Consensus 658 ~-------------------------~~~~~~~Gt~~YmAPE~~-~~~~~s~ksDVwSfGvvl~Elltg~ 701 (823)
. ......+||+.|||||++ ....++.++|||||||+||||++|.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 0 123346889999999986 4567999999999999999999953
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-29 Score=269.44 Aligned_cols=230 Identities=21% Similarity=0.333 Sum_probs=167.2
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
..+.|++.+.||+|+||.||+|+... ++.||||.+.... ..+++.+|+.++.+++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 45779999999999999999998764 8999999997543 34779999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
|+++++|.+++.... ..+.+.....++ .||..+.++.+||+|||+++.+.....
T Consensus 105 ~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-- 180 (314)
T ss_dssp CCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS--
T ss_pred cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc--
Confidence 999999999885211 122333222222 334447888999999999987654322
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... .......... ..... .
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~-~~~~~-------~ 247 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----RAIFMIPTNP-PPTFR-------K 247 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSC-CCCCS-------S
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhcCC-CcccC-------C
Confidence 223457999999999999999999999999999999999999998533211 1111111110 00100 1
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+......+.+++..||+.||++||++.++++.
T Consensus 248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11224567889999999999999999999873
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-30 Score=304.93 Aligned_cols=230 Identities=21% Similarity=0.248 Sum_probs=173.2
Q ss_pred HhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~ 597 (823)
..++|++.++||+|+||+||+|+... ++.||||++++. .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 45789999999999999999998764 789999999753 223456788999999988 7999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|||||+++|+|..++...... |..++.||+..+.||+.+.++.+||+|||+|+......
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-- 496 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-- 496 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT--
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC--
Confidence 999999999999998642211 11111222223345666889999999999999653332
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......+||+.|||||++.+..|+.++|||||||+||||++|+.||..... ..+.. .... .. ..
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~---~i~~-~~----------~~ 560 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQ---SIME-HN----------VA 560 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHS-SC----------CC
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHH---HHHh-CC----------CC
Confidence 224457899999999999999999999999999999999999999853221 11111 1111 10 01
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCH-----HHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTM-----SDVVS 770 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~ 770 (823)
++......+.+++..||+.||++||++ .||++
T Consensus 561 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 561 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 222345678889999999999999998 67764
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-30 Score=285.85 Aligned_cols=220 Identities=13% Similarity=0.132 Sum_probs=159.4
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHH---HHHHhcCCCceeeEE-------eE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEM---MLIAKLQHRNLVRLL-------GC 589 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev---~~l~~l~H~Niv~l~-------g~ 589 (823)
.++|++.++||+|+||.||+|+.. +++.||||++... .....+.|.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467899999999999999999974 5899999999732 334567899999 566667899999998 66
Q ss_pred EEeCC-----------------eEEEEEEcccCCCchhhccCCCcc----cccCHHHHHHH-------------------
Q 003402 590 CIEQG-----------------EKILIYEYMVNKSLDVFLFDPTKK----HLLGWQLRVRI------------------- 629 (823)
Q Consensus 590 ~~~~~-----------------~~~lV~Ey~~~gsL~~~l~~~~~~----~~l~~~~r~~i------------------- 629 (823)
+.+.+ ..+|||||+ +|+|.+++...... ..+.+..+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 66553 288999999 68999998642110 11112222222
Q ss_pred ---HhccccccCCCceeceeeceeecCCCccccccccccccccccccccccCC-----------CCCchhhHHHHHHHHH
Q 003402 630 ---IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG-----------VFSVKSDVFSFGVLML 695 (823)
Q Consensus 630 ---~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~-----------~~s~ksDVwSfGvvl~ 695 (823)
+.||+.+.++.+||+|||+|+.... ......| +.|||||++.+. .++.++|||||||++|
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 2345557889999999999996432 2234578 999999999887 8999999999999999
Q ss_pred HHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 696 EILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 696 Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
||++|+.|+....... ........ .......+.+++..||+.||++||++.|+++
T Consensus 305 elltg~~Pf~~~~~~~------------------~~~~~~~~--~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 305 WIWCADLPITKDAALG------------------GSEWIFRS--CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHSSCCC------C------------------CSGGGGSS--CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHCCCCCccccccc------------------chhhhhhh--ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999984322110 01111110 0122356788999999999999999999986
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-30 Score=279.99 Aligned_cols=239 Identities=21% Similarity=0.379 Sum_probs=166.2
Q ss_pred ccHHHHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 003402 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE 592 (823)
Q Consensus 515 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~ 592 (823)
+.+..+....++|++.+.||+|+||.||+|+.. +++.||||.+.... ...+++.+|+.++.++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 333444456688999999999999999999874 58999999987542 3457899999999999 89999999999987
Q ss_pred ------CCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHH----H------------------hccccccCCCceec
Q 003402 593 ------QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----I------------------DGIAQDQHMNPKIS 644 (823)
Q Consensus 593 ------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----~------------------~~ia~d~~~~~KI~ 644 (823)
.+..++||||+++|+|.+++..... ..+.......+ + .||..+.++.+||+
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEe
Confidence 5689999999999999999864321 12333222222 2 23444778899999
Q ss_pred eeeceeecCCCcccccccccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~ 719 (823)
|||+++.+.... .......||+.|+|||.+. ...++.++|||||||++|||++|+.|+...... ....
T Consensus 172 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~ 244 (326)
T 2x7f_A 172 DFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RALF 244 (326)
T ss_dssp CCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHH
T ss_pred eCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-----HHHH
Confidence 999998764322 1223457999999999987 567899999999999999999999997532211 1111
Q ss_pred hhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 720 ~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..... ...... .......+.+++..||+.||++||++.++++.
T Consensus 245 ~~~~~-~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 245 LIPRN-PAPRLK--------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHS-CCCCCS--------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhhcC-ccccCC--------ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111 111111 11223467889999999999999999999874
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=270.09 Aligned_cols=230 Identities=19% Similarity=0.229 Sum_probs=170.2
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---------hhhHHHHHHHHHHHHhcC-CCceeeEEeEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---------GQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCI 591 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---------~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~ 591 (823)
..++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++.++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3478999999999999999999875 48899999986432 123457889999999996 999999999999
Q ss_pred eCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeece
Q 003402 592 EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMA 649 (823)
Q Consensus 592 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla 649 (823)
+.+..++||||+++++|.+++.... .+.......++ .+|..+.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccch
Confidence 9999999999999999999986421 22333322222 3344478889999999999
Q ss_pred eecCCCcccccccccccccccccccccc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYAL------EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~------~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~ 723 (823)
+.+.... ......||+.|+|||.+. ...++.++||||||+++|||++|+.|+..... ...... ...
T Consensus 172 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~---~~~ 243 (298)
T 1phk_A 172 CQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRM---IMS 243 (298)
T ss_dssp EECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH---HHH
T ss_pred hhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHHHHH---Hhc
Confidence 8765432 223457999999999885 55789999999999999999999999753221 111111 101
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
+.. .... .........+.+++..||+.||++||++.|+++
T Consensus 244 -~~~-~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 -GNY-QFGS-----PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -TCC-CCCT-----TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -CCc-ccCc-----ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 100 0000 011223456888999999999999999999876
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=279.08 Aligned_cols=248 Identities=20% Similarity=0.243 Sum_probs=167.4
Q ss_pred cHHHHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC-----------hhhHHHHHHHHHHHHhcCCCcee
Q 003402 516 SFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS-----------GQGLKEFKNEMMLIAKLQHRNLV 584 (823)
Q Consensus 516 ~~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~-----------~~~~~~f~~Ev~~l~~l~H~Niv 584 (823)
...++....++|.+.++||+|+||.||+|...+++.||||++.... ....+.+.+|+.++.+++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4566778889999999999999999999998889999999986421 12247899999999999999999
Q ss_pred eEEeEEEeC-----CeEEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------Hhcccccc
Q 003402 585 RLLGCCIEQ-----GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQ 637 (823)
Q Consensus 585 ~l~g~~~~~-----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~ 637 (823)
++++++... ...++||||++ |+|.+++..... .+.+.....+ +.||..+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC
Confidence 999999653 36899999998 678777754321 2333332222 23444578
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~ 716 (823)
++.+||+|||+++...... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+..... .....
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~ 244 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF--YNQLN 244 (362)
T ss_dssp TCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHH
T ss_pred CCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH--HHHHH
Confidence 8899999999998654332 2234679999999999887 6789999999999999999999999854321 11111
Q ss_pred HHHhhccCCcc-----------ccccCcccc-------cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 717 HAWSLCKNDRA-----------HELMDPVLQ-------NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 717 ~~~~~~~~~~~-----------~~l~d~~l~-------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........... .+.+...+. ..........+.+++..||+.||++|||+.|+++.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11111100000 000000000 00111224568889999999999999999999875
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=278.59 Aligned_cols=241 Identities=20% Similarity=0.196 Sum_probs=159.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------e
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG------E 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~------~ 595 (823)
++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 67999999999999999999865 5889999999753 3344567999999999999999999999997654 7
Q ss_pred EEEEEEcccCCCchhhccCCCcc-----------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK-----------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~-----------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
.++||||+++ +|.+++...-.. |..++.|++..+.||..+.++.+||+|||+++......
T Consensus 105 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 181 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-- 181 (371)
T ss_dssp EEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------
T ss_pred eEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--
Confidence 8999999975 677766432110 01111122222345555788999999999998764322
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc---------------
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK--------------- 723 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~--------------- 723 (823)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 182 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 182 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp ---------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred -ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 223468999999999999999999999999999999999999998543211 11110000000
Q ss_pred ----CC------ccccccCcccccC---CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 724 ----ND------RAHELMDPVLQNE---VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 724 ----~~------~~~~l~d~~l~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. ...++........ ........+.+++..||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00 0000000000000 011235678999999999999999999999885
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=286.95 Aligned_cols=237 Identities=17% Similarity=0.238 Sum_probs=173.4
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCC-CceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH-RNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H-~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||+|+. .+++.||||.+..... .+++.+|++++..++| +++..+..++.+.+..+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 6799999999999999999986 4589999998865432 2458899999999987 6666777777889999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccc---ccCCCceeceeeceeecCCCcc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQ---DQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~---d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+ +++|.+++..... .+.+.....++ .||+. +.++.+||+|||+++.+.....
T Consensus 85 ~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 9999999863221 23443333332 34444 5788999999999998754432
Q ss_pred c-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc-cchhHHHHhhccCCcccccc
Q 003402 658 Q-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS-FNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 658 ~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~-~~l~~~~~~~~~~~~~~~l~ 731 (823)
. .......||+.|||||.+.+..++.++|||||||+||||++|+.||....... ......... ......+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~----~~~~~~~ 237 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE----KKVATSI 237 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH----HHHHSCH
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh----ccccccH
Confidence 1 12235789999999999999999999999999999999999999986543321 111111110 0011111
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+.. .. ....++.+++..||+.||++||++.+|+++|+..
T Consensus 238 ~~l-~~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 238 EAL-CR----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHH-HT----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHH-hc----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 100 01 1235688899999999999999999999988764
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-29 Score=273.07 Aligned_cols=229 Identities=17% Similarity=0.259 Sum_probs=162.0
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC--------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS--------GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~--------~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~ 594 (823)
.++|.+.+.||+|+||.||+|+... ++.||||.+.... ......+.+|+.++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 3679999999999999999998754 7899999986432 122345889999999999999999999987655
Q ss_pred eEEEEEEcccCCCchhhccCCCcccccCHHHHHH----HH------------------hcccccc---CCCceeceeece
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----II------------------DGIAQDQ---HMNPKISDFGMA 649 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----i~------------------~~ia~d~---~~~~KI~DFGla 649 (823)
.++||||+++++|.+++..... +....... ++ .||..+. +..+||+|||++
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred -eEEEEecCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 8999999999999998864322 23322222 22 2333343 335999999999
Q ss_pred eecCCCcccccccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR 726 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 726 (823)
+...... ......||+.|+|||++. ...++.++|||||||++|||++|+.|+....... .+...... +.
T Consensus 165 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~----~~ 236 (322)
T 2ycf_A 165 KILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITS----GK 236 (322)
T ss_dssp EECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHH----TC
T ss_pred eeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHh----Cc
Confidence 9875432 123457999999999874 5678999999999999999999999986433221 11111110 00
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 727 ~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
. .. .+... ......+.+++..||+.||++||++.++++
T Consensus 237 ~-~~-~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 237 Y-NF-IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp C-CC-CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c-cc-Cchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0 00 00000 112456788999999999999999999975
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-30 Score=282.04 Aligned_cols=239 Identities=23% Similarity=0.375 Sum_probs=167.6
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
....++|++.+.||+|+||.||+|+... .||||.+.... ....+.|.+|+.++.+++||||+++++++.+.+..++
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 3445789999999999999999998754 59999987432 2334568899999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++++|.+++..... .+.+.....++. ||..+ ++.+||+|||+++......
T Consensus 107 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp ECBCCCSEEHHHHTTSSCC--CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred EeecccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999999999975431 223222222222 22234 5689999999987653221
Q ss_pred ---cccccccccccccccccccccC---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 657 ---LQGNTKRIVGTYGYMSPEYALE---------GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 657 ---~~~~~~~~~Gt~~YmAPE~~~~---------~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
.........||+.|+|||.+.. ..++.++|||||||++|||++|+.|+.....+ .. .+... .
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~---~~~~~-~ 257 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AI---IWQMG-T 257 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--HH---HHHHH-T
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HH---HHHhc-c
Confidence 1122233569999999999874 45899999999999999999999998543211 11 11111 1
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCC
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 778 (823)
+....... ......+.+++..||+.||++||++.+|+++|+.....
T Consensus 258 ~~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNLSQ--------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCCCC--------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCCc--------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 11111110 11223577899999999999999999999999887443
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=9e-29 Score=267.98 Aligned_cols=240 Identities=19% Similarity=0.232 Sum_probs=162.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEE------------
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI------------ 591 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~------------ 591 (823)
++|++.+.||+|+||.||+|+... ++.||||++........+++.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 678999999999999999999865 8999999998766667788999999999999999999999873
Q ss_pred --eCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHH----HH------------------hccccc-cCCCceecee
Q 003402 592 --EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----II------------------DGIAQD-QHMNPKISDF 646 (823)
Q Consensus 592 --~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----i~------------------~~ia~d-~~~~~KI~DF 646 (823)
+....++||||++ |+|.+++.... +....... ++ .||..+ +++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQGP----LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcCC----ccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence 4478899999998 69999886432 22222222 22 233334 5678999999
Q ss_pred eceeecCCCcc-ccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 647 GMARMFGGDEL-QGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 647 Gla~~~~~~~~-~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
|+++....... ........||+.|+|||.+.. ..++.++|||||||++|||++|+.|+...... ............
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~ 243 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLILESIPV 243 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHSCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCC
Confidence 99987643221 122334568999999998865 67999999999999999999999998543211 111111000000
Q ss_pred ---Cccc---ccc----Ccccc-cC-----CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 ---DRAH---ELM----DPVLQ-NE-----VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ---~~~~---~l~----d~~l~-~~-----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.... ..+ ..... .. ........+.+++..||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000 000 00000 00 011234568899999999999999999999874
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-29 Score=276.20 Aligned_cols=235 Identities=21% Similarity=0.262 Sum_probs=162.8
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------C
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------G 594 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~ 594 (823)
.++|++.+.||+|+||.||+|+.. +++.||||++... .....+++.+|++++++++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 367999999999999999999874 5899999999643 233456799999999999999999999999765 3
Q ss_pred eEEEEEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeec
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
..++||||+ +++|.+++.... +....... .+.||+.+.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~----l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHEK----LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecC-CCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 569999999 889998886422 22222222 223455578899999999999976
Q ss_pred CCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC------
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND------ 725 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~------ 725 (823)
... ....+||+.|+|||++.+ ..++.++|||||||++|||++|+.|+..... ...+..........
T Consensus 179 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 179 DSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--LDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHH
T ss_pred ccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHH
Confidence 432 234679999999999887 6799999999999999999999999853321 11111111100000
Q ss_pred -----c-------cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 -----R-------AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 -----~-------~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ..+....... .........+.+++..||+.||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 0000000000 1112234568889999999999999999999885
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-29 Score=275.94 Aligned_cols=247 Identities=18% Similarity=0.208 Sum_probs=159.1
Q ss_pred HHHHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe--
Q 003402 519 SVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE-- 595 (823)
Q Consensus 519 ~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~-- 595 (823)
......++|++.++||+|+||.||+|+.. +++.||||++... ....+.+.+|++.+..++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 44566789999999999999999999875 5899999998653 2333567788999999999999999999976443
Q ss_pred -----EEEEEEcccCCCchhhc---cCCCcc-------------------c--ccCHHHHHHHHhcccccc-CCCceece
Q 003402 596 -----KILIYEYMVNKSLDVFL---FDPTKK-------------------H--LLGWQLRVRIIDGIAQDQ-HMNPKISD 645 (823)
Q Consensus 596 -----~~lV~Ey~~~gsL~~~l---~~~~~~-------------------~--~l~~~~r~~i~~~ia~d~-~~~~KI~D 645 (823)
.++||||++++.+..+. ...... | ..++.|++..+.||+.+. ++.+||+|
T Consensus 96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence 88999999875332221 111110 1 222333333445555565 88999999
Q ss_pred eeceeecCCCccccccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
||+++.+..... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.|+...... ............
T Consensus 176 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~ 250 (360)
T 3e3p_A 176 FGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA--GQLHEIVRVLGC 250 (360)
T ss_dssp CTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCC
T ss_pred CCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH--HHHHHHHHHcCC
Confidence 999987654332 23457899999999987655 899999999999999999999998543221 111111110000
Q ss_pred -----------C-ccccccCc------ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 -----------D-RAHELMDP------VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 -----------~-~~~~l~d~------~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ......+. .............+.+++..||+.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 00000000 00011122246678999999999999999999999875
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.3e-29 Score=277.81 Aligned_cols=240 Identities=16% Similarity=0.185 Sum_probs=167.6
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC--------CCceeeEEeEEE---
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ--------HRNLVRLLGCCI--- 591 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~--------H~Niv~l~g~~~--- 591 (823)
.++|++.++||+|+||+||+|+.. +++.||||+++.. ....+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999864 4889999999753 345678999999999986 888999999998
Q ss_pred -eCCeEEEEEEcccCCCchhhccCCCcccccCHHH-----------------------HHHHHhccccccC---------
Q 003402 592 -EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL-----------------------RVRIIDGIAQDQH--------- 638 (823)
Q Consensus 592 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~-----------------------r~~i~~~ia~d~~--------- 638 (823)
+....++||||+ +++|.+++..... ..+.+.. |+..+.||+.+.+
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNY-QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence 456899999999 4555554432211 1122222 2222233333433
Q ss_pred ----------------------------------------CCceeceeeceeecCCCccccccccccccccccccccccC
Q 003402 639 ----------------------------------------MNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678 (823)
Q Consensus 639 ----------------------------------------~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~ 678 (823)
..+||+|||+|+..... .....||+.|||||++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHT
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhcC
Confidence 37999999999876432 233579999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCcc----chhHHHHhhccC-------------------CccccccCcc-
Q 003402 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF----NLLGHAWSLCKN-------------------DRAHELMDPV- 734 (823)
Q Consensus 679 ~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~----~l~~~~~~~~~~-------------------~~~~~l~d~~- 734 (823)
..++.++|||||||+||||++|+.||........ ..+......... +....+.+..
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP 347 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence 9999999999999999999999999865443211 111111111000 0000000000
Q ss_pred ------c--ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 ------L--QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 ------l--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+ ....+......+.+++..||+.||++|||+.|+++.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0 012345667789999999999999999999999873
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.9e-29 Score=280.87 Aligned_cols=176 Identities=19% Similarity=0.256 Sum_probs=139.5
Q ss_pred hcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhc------CCCceeeEEeEEEeCCeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKL------QHRNLVRLLGCCIEQGEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l------~H~Niv~l~g~~~~~~~~ 596 (823)
..+|++.++||+|+||.||+|+... ++.||||+++.. ....+++.+|++++..+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 3579999999999999999998754 889999999753 34456788899888887 577999999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCC--ceeceeeceeec
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMN--PKISDFGMARMF 652 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~--~KI~DFGla~~~ 652 (823)
++||||+. ++|.+++...... .+.+.....++ .||+.+.++. +||+|||+|+..
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQ-GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEEEeccC-CCHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 99999996 6888887543221 13333333322 3444466665 999999999875
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVY 707 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~ 707 (823)
... .....||+.|||||++.+..++.++|||||||++|||++|+.|+...
T Consensus 253 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 253 HQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 432 23468999999999999999999999999999999999999987543
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-29 Score=279.29 Aligned_cols=241 Identities=17% Similarity=0.207 Sum_probs=162.5
Q ss_pred HHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------ 593 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------ 593 (823)
....++|++.++||+|+||.||+|+.. +++.||||++..... ...+|++++++++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999864 589999999865422 234799999999999999999999543
Q ss_pred --------------------------------CeEEEEEEcccCCCchhhccCC-CcccccCHHHHHHH-----------
Q 003402 594 --------------------------------GEKILIYEYMVNKSLDVFLFDP-TKKHLLGWQLRVRI----------- 629 (823)
Q Consensus 594 --------------------------------~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~r~~i----------- 629 (823)
...++||||++ |+|.+.+... .....+.+.....+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999998 5777666421 01112333332222
Q ss_pred -----------Hhccccc-cCCCceeceeeceeecCCCccccccccccccccccccccccCCC-CCchhhHHHHHHHHHH
Q 003402 630 -----------IDGIAQD-QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLE 696 (823)
Q Consensus 630 -----------~~~ia~d-~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~E 696 (823)
+.||+.+ .++.+||+|||+|+.+..... .....||+.|+|||.+.+.. ++.++|||||||++||
T Consensus 158 H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 2344445 578899999999997754332 23457899999999988754 8999999999999999
Q ss_pred HHhCCCCCCCCCCCccchhHHHHhhccCC---------------ccccccCcccccCCCHHHHHHHHHHHHHccccCcCC
Q 003402 697 ILSSKKNTGVYNTDSFNLLGHAWSLCKND---------------RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAED 761 (823)
Q Consensus 697 lltg~~p~~~~~~~~~~l~~~~~~~~~~~---------------~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~ 761 (823)
|++|+.|+..... ...+.......... ....+.........+......+.+++..||+.||++
T Consensus 235 ll~g~~pf~~~~~--~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 235 LILGKPLFSGETS--IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999854321 11111111110000 000000111111122234456889999999999999
Q ss_pred CCCHHHHHHH
Q 003402 762 RPTMSDVVSM 771 (823)
Q Consensus 762 RPt~~evl~~ 771 (823)
|||+.|+++.
T Consensus 313 R~t~~e~l~h 322 (383)
T 3eb0_A 313 RINPYEAMAH 322 (383)
T ss_dssp SCCHHHHHTS
T ss_pred CCCHHHHhcC
Confidence 9999999863
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-29 Score=266.80 Aligned_cols=231 Identities=22% Similarity=0.326 Sum_probs=160.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----------
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE---------- 592 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~---------- 592 (823)
.++|++.+.||+|+||.||+|+.. +++.||||.+... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 357999999999999999999875 5899999999653 3456789999999999999999999999876
Q ss_pred ---CCeEEEEEEcccCCCchhhccCCCcccccCHHHH----HHHH------------------hccccccCCCceeceee
Q 003402 593 ---QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR----VRII------------------DGIAQDQHMNPKISDFG 647 (823)
Q Consensus 593 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r----~~i~------------------~~ia~d~~~~~KI~DFG 647 (823)
.+..++||||+++|+|.+++..... .+..... .+++ .||..+.++.+||+|||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENL--NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCG--GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcccc--ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 3578999999999999999964322 1222222 2222 33444788899999999
Q ss_pred ceeecCCCcc------------ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch
Q 003402 648 MARMFGGDEL------------QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL 714 (823)
Q Consensus 648 la~~~~~~~~------------~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l 714 (823)
+++....... ........||+.|+|||.+.+. .++.++|||||||++|||++ |+.... +....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-~~~~~ 237 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-ERVNI 237 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHHHH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-hHHHH
Confidence 9987643210 1122346799999999999864 78999999999999999998 332110 00111
Q ss_pred hHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 715 LGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 715 ~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. .. ... ...............+.+++..||+.||++|||+.++++.
T Consensus 238 ~~---~~-~~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 238 LK---KL-RSV------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HH---HH-HST------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HH---hc-ccc------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11 11 110 0111122333445567889999999999999999999874
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-29 Score=266.50 Aligned_cols=231 Identities=22% Similarity=0.315 Sum_probs=153.0
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhh-HHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQG-LKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~-~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
..++|++.++||+|+||.||+++.. +++.||||++.... ... .+.+.+|...++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 3467999999999999999999874 58999999997542 222 23455555668889999999999999999999999
Q ss_pred EEcccCCCchhhccCC-CcccccCHHHHH-----------------------HHHhccccccCCCceeceeeceeecCCC
Q 003402 600 YEYMVNKSLDVFLFDP-TKKHLLGWQLRV-----------------------RIIDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~r~-----------------------~i~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
|||++ |+|.+++... .....+.+.... ..+.||..+.++.+||+|||+++.....
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 99997 5887766421 011122222222 2223444577889999999999876543
Q ss_pred ccccccccccccccccccccc----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 656 ELQGNTKRIVGTYGYMSPEYA----LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~----~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
.. .....||+.|+|||.+ ....++.++|||||||++|||++|+.|+.........+. ....... ..
T Consensus 164 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~-~~-- 233 (290)
T 3fme_A 164 VA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK----QVVEEPS-PQ-- 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH----HHHHSCC-CC--
T ss_pred cc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH----HHhccCC-CC--
Confidence 22 2234799999999996 566789999999999999999999999854322211111 1111110 00
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.........+.+++..||+.||++|||+.|+++
T Consensus 234 ------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 ------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 011123456788999999999999999999977
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-28 Score=273.60 Aligned_cols=233 Identities=11% Similarity=0.042 Sum_probs=152.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc--CCCceeeEE-------eEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLKEFKNEMMLIAKL--QHRNLVRLL-------GCCI 591 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~---~~~~~f~~Ev~~l~~l--~H~Niv~l~-------g~~~ 591 (823)
.+|.+.++||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++..+ +|||||+++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45889999999999999999975 589999999986432 3456788885544444 699988855 4444
Q ss_pred eC-----------------CeEEEEEEcccCCCchhhccCCCcccccC--------HH------------------HHHH
Q 003402 592 EQ-----------------GEKILIYEYMVNKSLDVFLFDPTKKHLLG--------WQ------------------LRVR 628 (823)
Q Consensus 592 ~~-----------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~--------~~------------------~r~~ 628 (823)
.. ...+||||||+ |+|.+++.......... +. ||+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi 220 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF 220 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence 33 34899999999 89999986421111111 11 1122
Q ss_pred HHhccccccCCCceeceeeceeecCCCccccccccccccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 629 IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 629 i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
.+.||+.+.++.+||+|||+|+..... .....||+.|||||++.+ ..++.++|||||||+||||++|+.|+..
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred CHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 234555578899999999999976432 113567799999999987 6799999999999999999999999865
Q ss_pred CCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 707 YNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 707 ~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
........ +........................+.+++..||+.||++|||+.++++
T Consensus 296 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 296 VTPGIKGS-------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CCTTCTTC-------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cCcccccc-------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 43221100 0000000000111111111233567888999999999999999999875
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=280.13 Aligned_cols=230 Identities=21% Similarity=0.226 Sum_probs=158.8
Q ss_pred CcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.|...++||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++.+.+..++||||+.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 35556889999999998776667999999998643 345788999999886 89999999999999999999999995
Q ss_pred CCCchhhccCCCcccc-cC-------HHHHHHHHh------------------ccccc-------------cCCCceece
Q 003402 605 NKSLDVFLFDPTKKHL-LG-------WQLRVRIID------------------GIAQD-------------QHMNPKISD 645 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~-l~-------~~~r~~i~~------------------~ia~d-------------~~~~~KI~D 645 (823)
|+|.+++........ .. +....+++. ||+.+ .++.+||+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 699999865432110 00 122233332 33333 245799999
Q ss_pred eeceeecCCCccc--cccccccccccccccccccC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchh
Q 003402 646 FGMARMFGGDELQ--GNTKRIVGTYGYMSPEYALE-------GVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLL 715 (823)
Q Consensus 646 FGla~~~~~~~~~--~~~~~~~Gt~~YmAPE~~~~-------~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~ 715 (823)
||+++.+...... .......||+.|||||++.+ ..++.++|||||||++|||++ |+.|+.........+.
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~ 251 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHH
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHh
Confidence 9999987654321 12334689999999999976 678999999999999999999 8888753322111110
Q ss_pred HHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 716 ~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
. ..... +.............+.+++..||+.||++|||+.+|++
T Consensus 252 ~------~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 252 R------GIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H------TCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c------CCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 0 00000 01111223456678899999999999999999999986
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-29 Score=276.19 Aligned_cols=240 Identities=19% Similarity=0.241 Sum_probs=168.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~~~ 597 (823)
++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++.+++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 57999999999999999999865 57899999997543 33457899999999999999999999999765 4789
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||+. |+|.+++.... +.+.....+ +.||+.+.++.+||+|||+++.....
T Consensus 107 iv~e~~~-~~L~~~l~~~~----~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEECCS-EEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEcccC-cCHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 9999997 58888875432 233222222 23455578889999999999976543
Q ss_pred ccc-cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc---ccc
Q 003402 656 ELQ-GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA---HEL 730 (823)
Q Consensus 656 ~~~-~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~l 730 (823)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.|+...... ............... ...
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL--DQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG--GHHHHHHHHHCSCCHHHHHTC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHh
Confidence 221 12344689999999998765 45899999999999999999999998543221 111111111100000 000
Q ss_pred cC--------ccc-ccCC-----CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 731 MD--------PVL-QNEV-----SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 731 ~d--------~~l-~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+ ... .... .......+.+++..||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 000 0000 11224567899999999999999999999875
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-29 Score=270.01 Aligned_cols=232 Identities=22% Similarity=0.333 Sum_probs=144.7
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHH-HHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMM-LIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~-~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.+.||+|+||.||+|... +++.||||++.... ....+++..|+. +++.++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 67888999999999999999875 58999999997542 334456667776 7778899999999999999999999999
Q ss_pred cccCCCchhhccCC--CcccccCHHHHHH-----------------------HHhccccccCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDP--TKKHLLGWQLRVR-----------------------IIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~--~~~~~l~~~~r~~-----------------------i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+++ +|.+++... .....+.+..... .+.||..+.++.+||+|||+++.+....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 180 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence 9985 776665420 0011122222211 1234444788899999999998764332
Q ss_pred cccccccccccccccccccc----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 657 LQGNTKRIVGTYGYMSPEYA----LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~----~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
. .....||+.|+|||.+ .+..++.++|||||||++|||++|+.|+........ ..... ..+. .
T Consensus 181 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~-~~~~-----~ 247 (327)
T 3aln_A 181 A---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QLTQV-VKGD-----P 247 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCC-CCSC-----C
T ss_pred c---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HHHHH-hcCC-----C
Confidence 1 2234799999999998 466789999999999999999999999854321100 00000 0000 0
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
+.+...........+.+++..||+.||++||++.+|++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111223457888999999999999999999976
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=273.37 Aligned_cols=238 Identities=17% Similarity=0.213 Sum_probs=162.2
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe------EEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE------KIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~------~~l 598 (823)
.+|.+.++||+|+||.||+|+...+..||+|++..... ...+|+++++.++|||||++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46899999999999999999988777799998864321 22469999999999999999999976443 789
Q ss_pred EEEcccCCCchhhccCCCcccccCHH----------------------HHHHHHhccccc-cCCCceeceeeceeecCCC
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQD-QHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d-~~~~~KI~DFGla~~~~~~ 655 (823)
||||++++.+............+.+. ||+..+.||+.+ .++.+||+|||+|+.+...
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 99999876554433211111112222 222233455556 7889999999999987443
Q ss_pred ccccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc-----------
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK----------- 723 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~----------- 723 (823)
.. .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... ..+........
T Consensus 196 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 196 EP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI--DQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHHHC
T ss_pred CC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhhC
Confidence 32 2345789999999998765 5899999999999999999999998543211 11111111000
Q ss_pred ----CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 724 ----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 724 ----~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......+................+.+++..||+.||++|||+.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000001000001111122234578899999999999999999999875
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=267.68 Aligned_cols=242 Identities=21% Similarity=0.300 Sum_probs=167.8
Q ss_pred HhcCcceeeeeccccceeEEeeee--cCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCceeeEEeEEE----
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRL--LNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKL---QHRNLVRLLGCCI---- 591 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~--~~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l---~H~Niv~l~g~~~---- 591 (823)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++..+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 447899999999999999999987 357899999986432 12224567788777766 8999999999997
Q ss_pred -eCCeEEEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeec
Q 003402 592 -EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGM 648 (823)
Q Consensus 592 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGl 648 (823)
.....++||||++ |+|.+++...... .+.+.....++ .||..+.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 4567899999998 6999888643221 13333332222 334447888999999999
Q ss_pred eeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC---
Q 003402 649 ARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND--- 725 (823)
Q Consensus 649 a~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~--- 725 (823)
++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.|+..... ..............
T Consensus 167 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 167 ARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPGEE 241 (326)
T ss_dssp CCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCGG
T ss_pred cccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHHHcCCCCcc
Confidence 98764322 23346799999999999999999999999999999999999999854321 11111111110000
Q ss_pred cccc-------ccC---cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 RAHE-------LMD---PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 ~~~~-------l~d---~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.... ... ..............+.+++..||+.||++||++.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 000 000011122334567889999999999999999999863
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=260.28 Aligned_cols=230 Identities=23% Similarity=0.279 Sum_probs=168.3
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
..++|++.++||+|+||.||+|+.. +++.||||.+... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999876 5889999998643 234567899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccc---cCCCceeceeeceeecCC
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQD---QHMNPKISDFGMARMFGG 654 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d---~~~~~KI~DFGla~~~~~ 654 (823)
+||+++++|.+++.... .+.......++. +|..+ .+..+||+|||+++....
T Consensus 100 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 99999999988875322 233333333322 22223 245799999999987644
Q ss_pred CccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.. ......||+.|+|||.+.+ .++.++||||||+++|||++|+.|+..... ..+... . ..+..... .+.
T Consensus 177 ~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~---~-~~~~~~~~-~~~ 245 (287)
T 2wei_A 177 NT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKR---V-ETGKYAFD-LPQ 245 (287)
T ss_dssp CS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH---H-HHCCCCCC-SGG
T ss_pred CC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHH---H-HcCCCCCC-chh
Confidence 32 1223568999999998865 589999999999999999999999753321 111111 1 11110000 000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++..||+.||++|||+.|+++.
T Consensus 246 -----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 -----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp -----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 01223567889999999999999999999873
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=271.82 Aligned_cols=241 Identities=19% Similarity=0.251 Sum_probs=167.2
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----CeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GEK 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~~ 596 (823)
.++|++.+.||+|+||.||+|+.. +++.||||.+.... .....++.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 367999999999999999999875 58899999997543 33456789999999999999999999998764 678
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
++||||+. |+|.+++.... +.+.....+ +.||..+.++.+||+|||+++.+..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~~----~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQM----LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEECCCS-EEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEeccC-ccHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 99999997 68888875421 233222222 2344457888999999999997653
Q ss_pred Ccccc--------ccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC
Q 003402 655 DELQG--------NTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 655 ~~~~~--------~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
..... ......||+.|+|||.+.. ..++.++|||||||++|||++|+.|+...... .............
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR--HQLLLIFGIIGTP 242 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCC
Confidence 32111 1223578999999998765 77999999999999999999999998543211 1111111111000
Q ss_pred c----cccccCcc-------c-c-c-----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 R----AHELMDPV-------L-Q-N-----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 ~----~~~l~d~~-------l-~-~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ...+..+. + . . .........+.+++..||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 00000000 0 0 0 0011234567899999999999999999999874
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=267.43 Aligned_cols=237 Identities=20% Similarity=0.228 Sum_probs=169.6
Q ss_pred cCcceeeeeccccceeEEeeee--cCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCc------eeeEEeEEEeCCeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL--LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN------LVRLLGCCIEQGEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~--~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~N------iv~l~g~~~~~~~~ 596 (823)
++|++.++||+|+||.||+|.. .+++.||||.++.. ....+.+.+|+.++..++|+| ++++++++.+.+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 6799999999999999999986 35889999999754 344578899999999987765 99999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------cccccc-----------------
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQ----------------- 637 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~----------------- 637 (823)
++||||+ +++|.+++..... ..+.+.....++. ||..+.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 8899988864332 1233333322222 222233
Q ss_pred --CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchh
Q 003402 638 --HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLL 715 (823)
Q Consensus 638 --~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~ 715 (823)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... ...
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~ 243 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK--EHL 243 (339)
T ss_dssp ESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH--HHH
T ss_pred ccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH--HHH
Confidence 667999999999875432 23467999999999999999999999999999999999999998643221 111
Q ss_pred HHHHhhccCC--------ccccc---------------------cCccc-ccCCCHHHHHHHHHHHHHccccCcCCCCCH
Q 003402 716 GHAWSLCKND--------RAHEL---------------------MDPVL-QNEVSLPMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 716 ~~~~~~~~~~--------~~~~l---------------------~d~~l-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
.......... ..... ..+.. ...........+.+++..||+.||++|||+
T Consensus 244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 1111110000 00000 00000 011233456788999999999999999999
Q ss_pred HHHHHH
Q 003402 766 SDVVSM 771 (823)
Q Consensus 766 ~evl~~ 771 (823)
.|+++.
T Consensus 324 ~ell~h 329 (339)
T 1z57_A 324 REALKH 329 (339)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 998764
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=8.7e-29 Score=274.69 Aligned_cols=235 Identities=21% Similarity=0.270 Sum_probs=151.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------Ce
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------GE 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~~ 595 (823)
++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 67999999999999999999864 5889999999653 334457889999999999999999999999754 56
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
.++|+||+ +++|..++... .+.+.....+ +.||+.+.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 89999999 68998888642 2333332222 234455788999999999998754
Q ss_pred CCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc---ccc
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR---AHE 729 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~---~~~ 729 (823)
.. .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+........... ...
T Consensus 184 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 184 DE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHHHTT
T ss_pred cc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHH
Confidence 32 234689999999999887 6789999999999999999999999854321 111111111110000 000
Q ss_pred --------ccCcccc-cCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 730 --------LMDPVLQ-NEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 730 --------l~d~~l~-~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+..... .... ......+.+++..||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000 0001 1123567889999999999999999999875
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-28 Score=275.93 Aligned_cols=238 Identities=20% Similarity=0.212 Sum_probs=159.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------CeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------GEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~~~~ 597 (823)
..|++.++||+|+||.||+|+.. +++.||||++.... +.+.+|++++++++|||||++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46889999999999999999986 48999999986532 2234799999999999999999998652 2367
Q ss_pred EEEEcccCCCchhhccCC-CcccccCHH----------------------HHHHHHhccccccC-CCceeceeeceeecC
Q 003402 598 LIYEYMVNKSLDVFLFDP-TKKHLLGWQ----------------------LRVRIIDGIAQDQH-MNPKISDFGMARMFG 653 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~-~~~~~l~~~----------------------~r~~i~~~ia~d~~-~~~KI~DFGla~~~~ 653 (823)
+||||+++ +|...+... .....+.+. ||+..+.||+.+.+ ..+||+|||+++.+.
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 89999986 454443210 011122222 22223344555644 568999999999765
Q ss_pred CCccccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhcc---------
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK--------- 723 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~--------- 723 (823)
.... .....||+.|||||++.+. .++.++|||||||+||||++|+.||..... ...+.........
T Consensus 209 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~~~ 284 (420)
T 1j1b_A 209 RGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIREM 284 (420)
T ss_dssp TTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHHHH
T ss_pred cCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhh
Confidence 4322 2346799999999999765 799999999999999999999999854321 1111111111000
Q ss_pred CCccccccCccccc-----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 724 NDRAHELMDPVLQN-----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 724 ~~~~~~l~d~~l~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+...+.+.. .+.......+.+++.+||+.||++||++.|+++.
T Consensus 285 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 285 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00111111111110 1112234678899999999999999999999874
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=277.58 Aligned_cols=231 Identities=19% Similarity=0.235 Sum_probs=157.8
Q ss_pred HhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEEEE
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
...+|.+.++||+|+||+||.....+++.||||++..... +.+.+|++++.++ +|||||++++++.+.+..+||||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 3456889999999999996655555789999999965332 2356899999999 79999999999999999999999
Q ss_pred cccCCCchhhccCCCccc--ccCHHHHHHHH------------------hcccc-----ccCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKKH--LLGWQLRVRII------------------DGIAQ-----DQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~--~l~~~~r~~i~------------------~~ia~-----d~~~~~KI~DFGla~~~~~~~ 656 (823)
|+. |+|.+++....... ...+....+++ .||+. +....+||+|||+|+.+....
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 996 69999886543211 11122222332 33433 233457899999999775432
Q ss_pred c-cccccccccccccccccccc---CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 657 L-QGNTKRIVGTYGYMSPEYAL---EGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 657 ~-~~~~~~~~Gt~~YmAPE~~~---~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
. ........||+.|||||++. ...++.++|||||||++|||++ |+.|+....... ......... ....
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~------~~~~~~~~~-~~~~ 250 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ------ANILLGACS-LDCL 250 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH------HHHHTTCCC-CTTS
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH------HHHHhccCC-cccc
Confidence 1 12234468999999999997 4567889999999999999999 888874322111 111111100 0110
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.........+.+++..||+.||++|||+.+|++
T Consensus 251 ------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 ------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 112234556788999999999999999999985
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9e-29 Score=275.02 Aligned_cols=235 Identities=20% Similarity=0.267 Sum_probs=163.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeE----
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEK---- 596 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~---- 596 (823)
.++|.+.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 367999999999999999999865 5889999999753 233457899999999999999999999999877654
Q ss_pred --EEEEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceeec
Q 003402 597 --ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARMF 652 (823)
Q Consensus 597 --~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~~ 652 (823)
++||||+. ++|..++... +.+..... .+.||..+.++.+||+|||+++..
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGME-----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred eEEEEEcccc-ccHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999998 6887776432 22222222 234455578899999999999865
Q ss_pred CCCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc--c-c
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR--A-H 728 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~--~-~ 728 (823)
... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+..... ............... . .
T Consensus 195 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 195 DAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCHHHHT
T ss_pred ccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCcHHHHH
Confidence 432 234678999999999987 6799999999999999999999999854321 111111111000000 0 0
Q ss_pred c--------ccCcccc---c---CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 E--------LMDPVLQ---N---EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 ~--------l~d~~l~---~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ....... . .........+.+++..||+.||++|||+.|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 0000000 0 0011234578899999999999999999999875
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=266.85 Aligned_cols=176 Identities=22% Similarity=0.285 Sum_probs=139.4
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CC-----ceeeEEeEEEeCCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HR-----NLVRLLGCCIEQGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~-----Niv~l~g~~~~~~~ 595 (823)
..++|++.++||+|+||+||+|+.. +++.||||+++.. ....+++..|+.++..++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3478999999999999999999875 4789999999753 344577888999988885 45 49999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHH------------------------HHHHHhcccc--ccCCCceeceeece
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQL------------------------RVRIIDGIAQ--DQHMNPKISDFGMA 649 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~------------------------r~~i~~~ia~--d~~~~~KI~DFGla 649 (823)
.+|||||++ |+|.+++...... .+.+.. |+..+.||+. +.++.+||+|||+|
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFR-GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcC-CCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 5998888643211 122222 2222334444 44778999999999
Q ss_pred eecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGV 706 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~ 706 (823)
+..... .....||+.|||||++.+..++.++|||||||++|||++|+.|+..
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 987432 2346799999999999999999999999999999999999999864
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-28 Score=272.48 Aligned_cols=242 Identities=19% Similarity=0.260 Sum_probs=150.1
Q ss_pred cce-eeeeccccceeEEeeeec---CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeEEEEE
Q 003402 527 FSI-QSKLGEGGFGPVYKGRLL---NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEKILIY 600 (823)
Q Consensus 527 f~~-~~~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~~lV~ 600 (823)
|.+ .++||+|+||.||+|+.. +++.||||++.... ..+.+.+|+.++++++|||||++++++.. ....+|||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 554 358999999999999865 47899999997542 23578899999999999999999999965 67899999
Q ss_pred EcccCCCchhhccCCC------cccccCHHHHHH----------------------HHhcccc----ccCCCceeceeec
Q 003402 601 EYMVNKSLDVFLFDPT------KKHLLGWQLRVR----------------------IIDGIAQ----DQHMNPKISDFGM 648 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~------~~~~l~~~~r~~----------------------i~~~ia~----d~~~~~KI~DFGl 648 (823)
||+.+ +|.+++.... ....+.+..... .+.||+. +.++.+||+|||+
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 178 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence 99975 6766653210 011133322222 2234444 5678999999999
Q ss_pred eeecCCCcc-ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc-------cchhHHHH
Q 003402 649 ARMFGGDEL-QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS-------FNLLGHAW 719 (823)
Q Consensus 649 a~~~~~~~~-~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~-------~~l~~~~~ 719 (823)
|+.+..... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||.....+. ...+....
T Consensus 179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~ 258 (405)
T 3rgf_A 179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 258 (405)
T ss_dssp CC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHH
T ss_pred ceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHH
Confidence 987653321 1223456899999999999874 58999999999999999999999986433210 11111111
Q ss_pred hhccCCc---cccc-------------cCccccc--------CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 720 SLCKNDR---AHEL-------------MDPVLQN--------EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 720 ~~~~~~~---~~~l-------------~d~~l~~--------~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....... ...+ ....... .........+.+++..||+.||++|||+.|+++.
T Consensus 259 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 259 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 1110000 0000 0000000 0000113467889999999999999999999985
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=269.45 Aligned_cols=234 Identities=21% Similarity=0.274 Sum_probs=163.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe------
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE------ 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~------ 595 (823)
++|.+.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57899999999999999999875 5899999999753 23345689999999999999999999999987653
Q ss_pred EEEEEEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecC
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFG 653 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~ 653 (823)
.++||||+. ++|..++... +.......+ +.||..+.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGLK-----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 599999997 6888877432 232222222 234445788899999999998653
Q ss_pred CCccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc---ccc
Q 003402 654 GDELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR---AHE 729 (823)
Q Consensus 654 ~~~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~---~~~ 729 (823)
.. .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+..... ...+........... ...
T Consensus 178 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 178 AE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH--HHHHHHHHHHHCBCCHHHHTT
T ss_pred CC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHH
Confidence 32 234578999999999887 6789999999999999999999999854321 111111111000000 000
Q ss_pred ccC-----------cccc---cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 730 LMD-----------PVLQ---NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 730 l~d-----------~~l~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.+ .... ..........+.+++..||+.||++|||+.++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 0000 01112345678899999999999999999999874
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-28 Score=269.55 Aligned_cols=239 Identities=17% Similarity=0.247 Sum_probs=166.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-----------CCceeeEEeEEEe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-----------HRNLVRLLGCCIE 592 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-----------H~Niv~l~g~~~~ 592 (823)
++|.+.++||+|+||.||+|+.. +++.||||.+... ....+.+.+|+.++.+++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 67999999999999999999864 5889999999753 344567899999999886 8999999999987
Q ss_pred CC----eEEEEEEcccCCCchhhccCCCcccccCHHHHHHH-----------------------Hhcccc------ccCC
Q 003402 593 QG----EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI-----------------------IDGIAQ------DQHM 639 (823)
Q Consensus 593 ~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i-----------------------~~~ia~------d~~~ 639 (823)
.+ ..++||||+ +++|.+++...... .+.+.....+ +.||.. +..+
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHR-GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhcc-CCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence 54 789999999 89999988642211 1222222222 223333 2234
Q ss_pred CceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc----cchh
Q 003402 640 NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS----FNLL 715 (823)
Q Consensus 640 ~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~----~~l~ 715 (823)
.+||+|||+++..... .....||+.|||||++.+..++.++|||||||++|||++|+.|+....... ...+
T Consensus 176 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 176 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred eEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 7899999999876432 223579999999999999999999999999999999999999986443211 1111
Q ss_pred HHHHhhccC------------------CccccccC--------ccc--ccCCCHHHHHHHHHHHHHccccCcCCCCCHHH
Q 003402 716 GHAWSLCKN------------------DRAHELMD--------PVL--QNEVSLPMLVRYINVALLCVQENAEDRPTMSD 767 (823)
Q Consensus 716 ~~~~~~~~~------------------~~~~~l~d--------~~l--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~e 767 (823)
......... ......+. ..+ ....+......+.+++..||+.||++|||+.|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 111110000 00000000 000 11244567788999999999999999999999
Q ss_pred HHHH
Q 003402 768 VVSM 771 (823)
Q Consensus 768 vl~~ 771 (823)
+++.
T Consensus 331 ll~h 334 (373)
T 1q8y_A 331 LVNH 334 (373)
T ss_dssp HHTC
T ss_pred HhhC
Confidence 9874
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-27 Score=260.54 Aligned_cols=231 Identities=16% Similarity=0.142 Sum_probs=141.1
Q ss_pred hcCcceee-eeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCeEE
Q 003402 524 TENFSIQS-KLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEKI 597 (823)
Q Consensus 524 ~~~f~~~~-~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~----~~~~~ 597 (823)
.++|.+.+ .||+|+||.||+|+.. +++.||||++... .. ........+..++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-PK---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-HH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-HH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 46788855 6999999999999876 5899999999653 11 12222334667799999999999976 45689
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccc---cCCCceeceeeceeec
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQD---QHMNPKISDFGMARMF 652 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d---~~~~~KI~DFGla~~~ 652 (823)
+||||+++|+|.+++..... ..+.+.....++. ||..+ .++.+||+|||+++..
T Consensus 103 lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 99999999999999975432 1234433333332 23333 3556999999999876
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
.... .....||+.|+|||.+....++.++|||||||++|||++|+.|+......... .......... .
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~---~--- 249 (336)
T 3fhr_A 182 TQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGMKRRIRLG---Q--- 249 (336)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred cccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhHHHhhhcc---c---
Confidence 4322 23457899999999998889999999999999999999999998543222110 0000000000 0
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..............+.+++..||+.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 250 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000011112234568889999999999999999999984
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-27 Score=262.88 Aligned_cols=237 Identities=20% Similarity=0.229 Sum_probs=167.2
Q ss_pred cCcceeeeeccccceeEEeeeecC-C-cEEEEEEeccCChhhHHHHHHHHHHHHhcCCCc------eeeEEeEEEeCCeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-G-QEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN------LVRLLGCCIEQGEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~-~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~N------iv~l~g~~~~~~~~ 596 (823)
++|++.++||+|+||+||+|+... + +.||||.++.. ....+.+.+|+.++.+++|+| ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 689999999999999999998743 4 68999999753 344577899999999998776 99999999999999
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccc-------------------
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQ------------------- 635 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~------------------- 635 (823)
++||||+ +++|.+++..... ..+.+.....++ .||+.
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 5566666543221 123333333322 23333
Q ss_pred ccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchh
Q 003402 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLL 715 (823)
Q Consensus 636 d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~ 715 (823)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.|+...... ...
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~ 248 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR--EHL 248 (355)
T ss_dssp ESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHH
T ss_pred cCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHH
Confidence 35788999999999875432 23467999999999999999999999999999999999999998643221 111
Q ss_pred HHHHhhccCC--------ccccc---------------------cCcc-cccCCCHHHHHHHHHHHHHccccCcCCCCCH
Q 003402 716 GHAWSLCKND--------RAHEL---------------------MDPV-LQNEVSLPMLVRYINVALLCVQENAEDRPTM 765 (823)
Q Consensus 716 ~~~~~~~~~~--------~~~~l---------------------~d~~-l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~ 765 (823)
.......... ..... ..+. ............+.+++..||+.||++|||+
T Consensus 249 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 328 (355)
T 2eu9_A 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL 328 (355)
T ss_dssp HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence 1111110000 00000 0000 0001223445678899999999999999999
Q ss_pred HHHHHH
Q 003402 766 SDVVSM 771 (823)
Q Consensus 766 ~evl~~ 771 (823)
.|+++.
T Consensus 329 ~e~l~h 334 (355)
T 2eu9_A 329 AEALLH 334 (355)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 998763
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-28 Score=259.73 Aligned_cols=222 Identities=20% Similarity=0.323 Sum_probs=159.0
Q ss_pred HHHhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh------hhHHHHHHHHHHHHhc----CCCceeeEEeE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG------QGLKEFKNEMMLIAKL----QHRNLVRLLGC 589 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~------~~~~~f~~Ev~~l~~l----~H~Niv~l~g~ 589 (823)
....++|++.++||+|+||.||+|+.. +++.||||.+..... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344578999999999999999999864 588999999975432 1223467899999998 89999999999
Q ss_pred EEeCCeEEEEEEc-ccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccc-cCCCceece
Q 003402 590 CIEQGEKILIYEY-MVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQD-QHMNPKISD 645 (823)
Q Consensus 590 ~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d-~~~~~KI~D 645 (823)
+.+.+..++|+|| +.+++|.+++.... .+.+.....++ .||..+ .++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 89999999986422 23333333332 233335 688899999
Q ss_pred eeceeecCCCccccccccccccccccccccccCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC
Q 003402 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS-VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724 (823)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s-~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~ 724 (823)
||+++...... .....||+.|+|||++.+..+. .++||||||+++|||++|+.|+.... .. ...
T Consensus 184 fg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~-------~~~ 248 (312)
T 2iwi_A 184 FGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----EI-------LEA 248 (312)
T ss_dssp CSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HH-------HHT
T ss_pred cchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----HH-------hhh
Confidence 99999875432 2345799999999999877764 59999999999999999999974210 00 000
Q ss_pred CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ...+......+.+++..||+.||++||++.|+++.
T Consensus 249 ---------~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 249 ---------E--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ---------C--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---------c--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 01112234567889999999999999999999884
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-28 Score=261.13 Aligned_cols=230 Identities=17% Similarity=0.302 Sum_probs=145.3
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hhH-HHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGL-KEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~~-~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.++|++.+.||+|+||.||+|+.. +++.||||.+..... ... +.+..+..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 367899999999999999999885 589999999975432 222 34455556788889999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHH-----------------------HHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLR-----------------------VRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r-----------------------~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||+ ++.+..+..... ..+..... +..+.||..+.++.+||+|||+++.+.....
T Consensus 104 e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp CCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 999 444444432111 11222221 1122344447788999999999987644321
Q ss_pred cccccccccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 658 QGNTKRIVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
.....||+.|+|||.+. ...++.++|||||||++|||++|+.|+....... ..... ..... ..
T Consensus 181 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~---~~~~~-~~---- 248 (318)
T 2dyl_A 181 ---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-EVLTK---VLQEE-PP---- 248 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHHH---HHHSC-CC----
T ss_pred ---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-HHHHH---HhccC-CC----
Confidence 23457999999999984 5678999999999999999999999985432211 11111 11111 00
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.. .......+.+++..||+.||.+||++.++++.
T Consensus 249 -~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 -LLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp -CCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -CCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000 11123467889999999999999999999763
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-28 Score=267.10 Aligned_cols=220 Identities=20% Similarity=0.315 Sum_probs=165.5
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh------hhHHHHHHHHHHHHhcC--CCceeeEEeEEEeC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG------QGLKEFKNEMMLIAKLQ--HRNLVRLLGCCIEQ 593 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~------~~~~~f~~Ev~~l~~l~--H~Niv~l~g~~~~~ 593 (823)
..++|++.++||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+.++.+++ ||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 4467999999999999999999864 588999999965321 12246788999999996 59999999999999
Q ss_pred CeEEEEEEcccC-CCchhhccCCCcccccCHHHHHHH----------------------Hhccccc-cCCCceeceeece
Q 003402 594 GEKILIYEYMVN-KSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQD-QHMNPKISDFGMA 649 (823)
Q Consensus 594 ~~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d-~~~~~KI~DFGla 649 (823)
+..++|+||+.. ++|.+++.... .+.......+ +.||..+ +++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999976 89999885422 2233322222 2334445 6789999999999
Q ss_pred eecCCCccccccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccc
Q 003402 650 RMFGGDELQGNTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 728 (823)
+.+.... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.|+.... . .....
T Consensus 198 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~-------~~~~~--- 259 (320)
T 3a99_A 198 ALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----E-------IIRGQ--- 259 (320)
T ss_dssp EECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----H-------HHHCC---
T ss_pred ccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----h-------hhccc---
Confidence 9875432 233579999999999987776 688999999999999999999974210 0 00000
Q ss_pred cccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 ~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. .........+.+++..||+.||++||++.||++.
T Consensus 260 ~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 V--------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp C--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c--------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0111223467889999999999999999999874
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-27 Score=287.09 Aligned_cols=215 Identities=17% Similarity=0.271 Sum_probs=159.7
Q ss_pred cCcceeeeeccccceeEEeeeec--CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe-----E
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL--NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE-----K 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~-----~ 596 (823)
++|++.++||+|+||.||+|+.. +++.||||.+... .....+.|.+|+.++.+++|||||++++++.+.+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999875 5899999998653 33455689999999999999999999999988665 7
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCC
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
+|||||+++++|.+++.. .+.+.....++ .||..+.+ .+||+|||+++.+..
T Consensus 160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999999987754 24444443333 33334544 899999999997643
Q ss_pred CccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
. ....||++|||||++.++. +.++|||||||+||||++|..|+...... .+.
T Consensus 234 ~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------------~~~--- 285 (681)
T 2pzi_A 234 F------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD------------------GLP--- 285 (681)
T ss_dssp C------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS------------------SCC---
T ss_pred C------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc------------------ccc---
Confidence 2 3467999999999987654 89999999999999999998775321000 000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCC-HHHHHHHHhc
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPT-MSDVVSMINN 774 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~~L~~ 774 (823)
...........+.+++..||+.||++||+ +.++...|.+
T Consensus 286 -~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 286 -EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp -TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred -ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00011123356788999999999999996 5555555544
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-27 Score=280.08 Aligned_cols=237 Identities=22% Similarity=0.233 Sum_probs=163.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe------CCeE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE------QGEK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~------~~~~ 596 (823)
++|++.++||+|+||.||+|... +++.||||++... .....+.|.+|++++.+++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 67999999999999999999875 4889999998754 34456789999999999999999999999765 6778
Q ss_pred EEEEEcccCCCchhhccCCCcccccCHHHHH----HHH------------------hccccccCC---Cceeceeeceee
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----RII------------------DGIAQDQHM---NPKISDFGMARM 651 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~----~i~------------------~~ia~d~~~---~~KI~DFGla~~ 651 (823)
++||||+++|+|.+++........+.+.... +++ .||..+.++ .+||+|||+++.
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 9999999999999999764322122222222 222 233334333 489999999997
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcc----
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA---- 727 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~---- 727 (823)
...... .....||+.|+|||.+.+..++.++|||||||++|||++|+.|+..... ...+..........
T Consensus 174 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 174 LDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp TTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC------CCS
T ss_pred cccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccchhhhh
Confidence 654332 2346899999999999999999999999999999999999999853211 00100000000000
Q ss_pred cccc------Ccc--cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHH
Q 003402 728 HELM------DPV--LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768 (823)
Q Consensus 728 ~~l~------d~~--l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~ev 768 (823)
.+.. ... ............+.+++..||+.||++|||+.++
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000 000 0112334467789999999999999999999773
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-26 Score=242.21 Aligned_cols=220 Identities=12% Similarity=0.094 Sum_probs=148.1
Q ss_pred cCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||.||+|+... ++.||||.+.... ....++|.+|+.++.+++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 579999999999999999999865 8999999997542 334578999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcccccCHHHHHHHHhccccc-----cCCCce-----eceeeceeecCCCccccccccccccccc
Q 003402 601 EYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQD-----QHMNPK-----ISDFGMARMFGGDELQGNTKRIVGTYGY 670 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia~d-----~~~~~K-----I~DFGla~~~~~~~~~~~~~~~~Gt~~Y 670 (823)
||+++++|.+++...... ..-.....+++.++..- -+..+| |.+.|..+ .++.+|
T Consensus 111 e~~~g~~L~~~l~~~~~~-~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~k--------------l~~~~~ 175 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSP-VGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVV--------------LAYPAT 175 (286)
T ss_dssp ECCCEEEHHHHHTTCCCH-HHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEE--------------ECSCCC
T ss_pred EecCCCCHHHHHhcCCCh-HHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEE--------------EEeccc
Confidence 999999999998542110 00011112222222110 011112 22222111 235567
Q ss_pred cccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHH
Q 003402 671 MSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINV 750 (823)
Q Consensus 671 mAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l 750 (823)
|+| ++.++|||||||++|||++|+.||......... ..+.... ......+ ..........+.++
T Consensus 176 ~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~--~~~~~~~----~~~~~~~---~~~~~~~~~~l~~l 239 (286)
T 3uqc_A 176 MPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL--APAERDT----AGQPIEP---ADIDRDIPFQISAV 239 (286)
T ss_dssp CTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS--EECCBCT----TSCBCCH---HHHCTTSCHHHHHH
T ss_pred cCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh--HHHHHHh----ccCCCCh---hhcccCCCHHHHHH
Confidence 765 789999999999999999999998643321100 0000000 0000000 01112234568889
Q ss_pred HHHccccCcCCCCCHHHHHHHHhccc
Q 003402 751 ALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 751 ~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
+..||+.||++| |+.|+++.|+...
T Consensus 240 i~~~l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 240 AARSVQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp HHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred HHHHcccCCccC-CHHHHHHHHHHHh
Confidence 999999999999 9999999998753
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-26 Score=255.27 Aligned_cols=220 Identities=14% Similarity=0.118 Sum_probs=148.0
Q ss_pred HhcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCC-Cce--------------
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQH-RNL-------------- 583 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H-~Ni-------------- 583 (823)
.+.+|...++||+|+||.||+|+.. +++.||||++.... ....+.|.+|+.++..++| +|.
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 3456888899999999999999954 58999999987432 2335789999999999987 221
Q ss_pred -eeE------EeEEEe-----CCeEEEEEEcccCCCchhhccC----CCcccccCHHHH---------------------
Q 003402 584 -VRL------LGCCIE-----QGEKILIYEYMVNKSLDVFLFD----PTKKHLLGWQLR--------------------- 626 (823)
Q Consensus 584 -v~l------~g~~~~-----~~~~~lV~Ey~~~gsL~~~l~~----~~~~~~l~~~~r--------------------- 626 (823)
+.+ ..+... ....+++|+++ .++|.+++.. ......+.+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH 234 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 234 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 111 111111 12456666655 6889888731 011112222222
Q ss_pred -HHHHhccccccCCCceeceeeceeecCCCccccccccccccccccccccc----------cCCCCCchhhHHHHHHHHH
Q 003402 627 -VRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA----------LEGVFSVKSDVFSFGVLML 695 (823)
Q Consensus 627 -~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~----------~~~~~s~ksDVwSfGvvl~ 695 (823)
+.++.||+.+.++.+||+|||+++..... .....| +.|||||++ ....++.++|||||||++|
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 22334555688899999999999875432 334678 999999999 5566899999999999999
Q ss_pred HHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHH
Q 003402 696 EILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769 (823)
Q Consensus 696 Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl 769 (823)
||++|+.|+...... +..+..+.... .....+.+++..||+.||++||++.+++
T Consensus 309 elltg~~Pf~~~~~~------------------~~~~~~~~~~~--~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 309 WIWCADLPNTDDAAL------------------GGSEWIFRSCK--NIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHSSCCCCTTGGG------------------SCSGGGGSSCC--CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHCCCCCCCcchh------------------hhHHHHHhhcc--cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999998533211 11111111111 1235688899999999999999977764
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=239.79 Aligned_cols=205 Identities=16% Similarity=0.174 Sum_probs=145.3
Q ss_pred cCccee-eeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHH-HhcCCCceeeEEeEEEe----CCeEE
Q 003402 525 ENFSIQ-SKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLI-AKLQHRNLVRLLGCCIE----QGEKI 597 (823)
Q Consensus 525 ~~f~~~-~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l-~~l~H~Niv~l~g~~~~----~~~~~ 597 (823)
++|.+. +.||+|+||.||++... +++.||||.++.. ..+.+|+.++ ..++||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 567776 78999999999999874 5889999999643 4677899887 56699999999999987 67889
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hcccccc---CCCceeceeeceeec
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQ---HMNPKISDFGMARMF 652 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~---~~~~KI~DFGla~~~ 652 (823)
+||||+++|+|.+++..... ..+.+.....++ .||..+. ++.+||+|||+++..
T Consensus 92 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 99999999999999865322 123333333322 2333344 788999999999754
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
.. ..++.++|||||||++|||++|+.|+........ .......+..
T Consensus 171 ~~------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----------~~~~~~~~~~ 216 (299)
T 3m2w_A 171 TG------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----------SPGMKTRIRM 216 (299)
T ss_dssp TT------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------CCSCCSSCT
T ss_pred cc------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh----------hHHHHHHHhh
Confidence 21 3467899999999999999999999853322100 0000000000
Q ss_pred cccccCCC----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PVLQNEVS----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~l~~~~~----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. ...+ ......+.+++..||+.||++|||+.|+++.
T Consensus 217 ~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 217 GQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp TC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 0111 1234568889999999999999999999874
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.9e-25 Score=240.58 Aligned_cols=223 Identities=13% Similarity=0.101 Sum_probs=154.0
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC--------hhhHHHHHHHHHHHHhcC---------CCceeeE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--------GQGLKEFKNEMMLIAKLQ---------HRNLVRL 586 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~--------~~~~~~f~~Ev~~l~~l~---------H~Niv~l 586 (823)
.++|++.++||+|+||+||+|+. +++.||||++.... ....+.+.+|+.++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46688899999999999999988 78999999997542 233478999999999886 8888888
Q ss_pred EeEEE------------------------------eCCeEEEEEEcccCCCchhhccCCCcc------------------
Q 003402 587 LGCCI------------------------------EQGEKILIYEYMVNKSLDVFLFDPTKK------------------ 618 (823)
Q Consensus 587 ~g~~~------------------------------~~~~~~lV~Ey~~~gsL~~~l~~~~~~------------------ 618 (823)
.+.+. +.+..+|||||+++|++.+.+......
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 88754 267899999999999766666432111
Q ss_pred c-ccCHHHHHHHHhccccccCC--------------------CceeceeeceeecCCCcccccccccccccccccccccc
Q 003402 619 H-LLGWQLRVRIIDGIAQDQHM--------------------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677 (823)
Q Consensus 619 ~-~l~~~~r~~i~~~ia~d~~~--------------------~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~ 677 (823)
| ..++.||+.++.||+.+.++ .+||+|||+|+..... ...||+.|||||++.
T Consensus 178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCSGGGC
T ss_pred HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccChhhhc
Confidence 1 12222333344556656665 8999999999976432 358999999999998
Q ss_pred CCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCCCccchhHHHH-hhccCCccccccCcccccCCCHHHHHHHHHHHHHcc
Q 003402 678 EGVFSVKSDVFSFGVL-MLEILSSKKNTGVYNTDSFNLLGHAW-SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCV 755 (823)
Q Consensus 678 ~~~~s~ksDVwSfGvv-l~Elltg~~p~~~~~~~~~~l~~~~~-~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl 755 (823)
+.. +.++||||++++ .+++++|..|+... ....... ........ ...............+.+++..||
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-----LWLHYLTDKMLKQMTF----KTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-----HHHHHHHHHHHHTCCC----SSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcch-----hhhhHHHHhhhhhhcc----CcccchhhhhhcCHHHHHHHHHHh
Confidence 766 999999998777 77788888875210 0000000 00000000 000011112346678999999999
Q ss_pred ccCcCCCCCHHHHH
Q 003402 756 QENAEDRPTMSDVV 769 (823)
Q Consensus 756 ~~dP~~RPt~~evl 769 (823)
+.| |+.|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 898888
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.8e-20 Score=168.12 Aligned_cols=108 Identities=19% Similarity=0.339 Sum_probs=93.3
Q ss_pred ccccccCCCCCcCCCCEEE--eCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEE
Q 003402 39 LAADTLTPTTLIRDGETLV--SPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVL 116 (823)
Q Consensus 39 ~~~~~i~~g~~l~~~~~lv--S~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL 116 (823)
++.++|.+|++|.+|++|+ |++|.|+|+|+.+|+ | +||++ .++||+|||+.| +.++.|+|..||||||
T Consensus 6 ~~~~~l~~g~~L~~g~~l~~~S~~g~~~L~~~~dgn-----l-vly~~--~~~vW~sn~~~~--~~~~~l~l~~dGNLVl 75 (119)
T 1b2p_A 6 SKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCN-----L-VLYDN--NNPIWATNTGGL--GNGCRAVLQPDGVLVV 75 (119)
T ss_dssp CSCSSSCCCCEEETTCEEEEEETTEEEEEEECTTSC-----E-EEEET--TEEEEECCCTTS--CSSCEEEECTTSCEEE
T ss_pred ecCcccCCCCEEcCCCEEEEeCCCCCEEEEEecCCC-----E-EEEEC--CEEEEeCCCccC--CCceEEEEccCCEEEE
Confidence 4678999999999999999 999999999999774 2 58876 799999999877 3457999999999999
Q ss_pred EeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeee
Q 003402 117 LNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQS 164 (823)
Q Consensus 117 ~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQS 164 (823)
.|.++.++|+|++........++|+|+|||||++. ++|||
T Consensus 76 ~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~~--------~~W~S 115 (119)
T 1b2p_A 76 ITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGD--------ALWAT 115 (119)
T ss_dssp ECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEES--------EEEEC
T ss_pred EeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEECc--------cEeCC
Confidence 99999999999876433456799999999999962 69997
|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=161.90 Aligned_cols=104 Identities=19% Similarity=0.384 Sum_probs=88.9
Q ss_pred cccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCC
Q 003402 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSN 121 (823)
Q Consensus 42 ~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g 121 (823)
|+|.+||.|..|++|+| |.|.|.|-..++ |.++.. .++||+|||+.|..+ .+.|+|+.||+|||.|+++
T Consensus 2 n~L~~g~~L~~g~~L~s--g~y~l~~q~DgN-----Lvly~~---~~~vW~ant~~~~~~-~~~L~l~~dGnLvL~d~~~ 70 (105)
T 4h3o_A 2 NILDNNEGLYAGQSLDV--EPYHFIMQDDCN-----LVLYDH---STSTWASNTEIGGKS-GCSAVLQSDGNFVVYDSSG 70 (105)
T ss_dssp CEECTTEEECTTCEEEE--TTEEEEECTTSC-----EEEEET---TEEEEECCCCCTTCC-SCEEEECTTSCEEEECTTC
T ss_pred CCcCCCCEEcCCCEEEE--CCEEEEECCCCe-----EEEEEC---CEEEEEecCCCCCCc-cEEEEEeCCccEEEECCCc
Confidence 67999999999999998 789999977654 555543 689999999999654 4799999999999999999
Q ss_pred CeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeee
Q 003402 122 GTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQS 164 (823)
Q Consensus 122 ~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQS 164 (823)
.+||+|+++.......|.|+|+|||||++. .||||
T Consensus 71 ~~vWss~t~~~~~~~~l~L~ddGNlVly~~--------~~W~S 105 (105)
T 4h3o_A 71 RSLWASHSTRGSGNYILILQDDGNVIIYGS--------DIWST 105 (105)
T ss_dssp CEEEECCCCCCSSCEEEEECTTSCEEEEES--------EEEEC
T ss_pred EEEEEecCCCCCCCEEEEEeCCCeEEEECC--------cEecC
Confidence 999999987555567899999999999964 49998
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-19 Score=161.98 Aligned_cols=110 Identities=25% Similarity=0.408 Sum_probs=93.6
Q ss_pred ccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCC
Q 003402 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQS 120 (823)
Q Consensus 41 ~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~ 120 (823)
+|+|.+|+.|.+|++|+ ++|.|+|+|+..|+ | |+|+. .++||+||++.|. ..+.|+|..||||||.|.+
T Consensus 1 ~d~l~~g~~L~~g~~l~-~~~~~~l~~~~dGn-----l-vl~~~--~~~vW~sn~~~~~--~~~~l~l~~dGNLVl~~~~ 69 (110)
T 3a0c_A 1 VNSLSSPNSLFTGHSLE-VGPSYRLIMQGDCN-----F-VLYDS--GKPVWASNTGGLG--SGCRLTLHNNGNLVIYDQS 69 (110)
T ss_dssp CCEEETTCEECTTCEEE-ETTTEEEEECTTSC-----E-EEEET--TEEEEECCCTTSC--SSCEEEECTTSCEEEECTT
T ss_pred CCEeCCCCEECCCCEEE-ECCCEEEEEcCCCc-----E-EEEEC--CEEEEECCCCCCC--CcEEEEEeCCCCEEEECCC
Confidence 47899999999999999 99999999988765 2 67763 7999999998773 3478999999999999999
Q ss_pred CCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCC
Q 003402 121 NGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPT 169 (823)
Q Consensus 121 g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PT 169 (823)
|.++|+|++........++|+|+|||||++. .+||||+||.
T Consensus 70 ~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~--------~~W~S~~~~~ 110 (110)
T 3a0c_A 70 NRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP--------VVWATGSGPA 110 (110)
T ss_dssp CCEEEECCCCCSSSCCEEEECTTSCEEEECS--------EEEECSCCC-
T ss_pred CcEEEecCCCCCCCCEEEEEeCCccEEEECC--------CEecCCCcCC
Confidence 9999999876443455799999999999852 6999999983
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=158.61 Aligned_cols=110 Identities=20% Similarity=0.322 Sum_probs=92.4
Q ss_pred ccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCC
Q 003402 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQS 120 (823)
Q Consensus 41 ~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~ 120 (823)
.|+|.+||.|.+|++|+ +|.|+|+|+..|+ . ++|. ..++||+|||+.|. .++.|+|..+|||||.|.+
T Consensus 2 ~dtl~~gq~L~~g~~L~--~g~~~L~~~~dgn---l---vly~--~~~~vW~sn~~~~~--~~~~l~l~~~GnLvl~d~~ 69 (115)
T 2dpf_A 2 DNVLLSGQTLHADHSLQ--AGAYTLTIQNKCN---L---VKYQ--NGRQIWASNTDRRG--SGCRLTLLSDGNLVIYDHN 69 (115)
T ss_dssp CCEEETTCEEETTEEEE--ETTEEEEECTTSC---E---EEEE--TTEEEEECSCTTSC--SSCEEEECTTSCEEEECTT
T ss_pred CCEeCCCCEECCCCEEE--CCCEEEEEcCCCc---E---EEEe--CCEEEEeCCCCCCC--CceEEEECCCCcEEEECCC
Confidence 47899999999999998 8999999987764 2 2365 37899999999883 4579999999999999998
Q ss_pred CCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCc
Q 003402 121 NGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTD 170 (823)
Q Consensus 121 g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTD 170 (823)
+.++|+|++........++|+|+|||||++. ++||||.+++.
T Consensus 70 ~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~~--------~~W~S~~~~~~ 111 (115)
T 2dpf_A 70 NNDVWGSACWGDNGKYALVLQKDGRFVIYGP--------VLWSLGPNGCR 111 (115)
T ss_dssp CCEEEECCCCCSSSCCEEEECTTSCEEEECS--------EEECSSTTCBC
T ss_pred ceEEEEcCCCCCCCCEEEEEeCCCeEEEECC--------CEEECCCCCCc
Confidence 9999999876433456799999999999942 69999998765
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.3e-20 Score=216.87 Aligned_cols=170 Identities=15% Similarity=0.054 Sum_probs=111.5
Q ss_pred eeeccccceeEEeee-ecCCcEEEEEEeccC----------ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEE
Q 003402 531 SKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ----------SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~-~~~~~~VAVK~l~~~----------~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~l 598 (823)
..++.|++|.+..++ ..-|+.+|||.+.+. .....++|.+|+++|+++ +|+||+++++++.+++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 456778888777664 334889999999643 123456799999999999 79999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcc----------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 599 IYEYMVNKSLDVFLFDPTKK----------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~----------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
||||+++++|.++|...... |..++.||+.++.||+.+.++.+||+|||+|+.+..+.. ...
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~--~~~ 397 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS--WPT 397 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C--CSH
T ss_pred EEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc--ccc
Confidence 99999999999999764322 233444566667788889999999999999998754432 234
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN 703 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p 703 (823)
+.+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 5789999999998865 567889999999999888665443
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=157.36 Aligned_cols=110 Identities=25% Similarity=0.466 Sum_probs=91.9
Q ss_pred ccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCC
Q 003402 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQS 120 (823)
Q Consensus 41 ~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~ 120 (823)
+|+|.+||.|.+|++| ++|.|+|+|+..|+ | +||.. .++||+||++.+ +.++.|+|..+|||||.| +
T Consensus 1 tdtl~~gq~L~~g~~L--~~~~~~L~~~~dgn-----l-vl~~~--~~~vW~sn~~~~--~~~~~l~l~~~GNLvl~d-~ 67 (112)
T 1xd5_A 1 SDRLNSGHQLDTGGSL--AEGGYLFIIQNDCN-----L-VLYDN--NRAVWASGTNGK--ASGCVLKMQNDGNLVIYS-G 67 (112)
T ss_dssp CCEEETTEEECTTCEE--EETTEEEEECTTSC-----E-EEEET--TEEEEECCCTTS--CSSEEEEECTTSCEEEEE-T
T ss_pred CCCCCCCCEECCCCEE--eCCCEEEEEcCCCc-----E-EEEEC--CEEEEeCCCcCC--CCCEEEEEeCCCCEEEEc-C
Confidence 4899999999999999 58999999998875 2 46765 689999999764 345789999999999999 7
Q ss_pred CCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCC
Q 003402 121 NGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYP 168 (823)
Q Consensus 121 g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~P 168 (823)
+.++|+|++........++|+|+|||||++. .+.++||||+|.
T Consensus 68 ~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~-----~~~~~W~S~~~~ 110 (112)
T 1xd5_A 68 SRAIWASNTNRQNGNYYLILQRDRNVVIYDN-----SNNAIWATHTNV 110 (112)
T ss_dssp TEEEEECCCCCSCCCCEEEECTTSCEEEECT-----TSCEEEECCCCC
T ss_pred CEEEEECCccCCCCCEEEEEeCCCcEEEECC-----CCceEEECCCcc
Confidence 8899999876433446799999999999975 346899999985
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.2e-17 Score=145.85 Aligned_cols=103 Identities=27% Similarity=0.433 Sum_probs=86.1
Q ss_pred cccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCC
Q 003402 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSN 121 (823)
Q Consensus 42 ~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g 121 (823)
++|.+||.|.+|++|+ +|.|+|+|...|+ .+ .|.. .++||+||++.+ +..+.|.|..||||||.|.++
T Consensus 2 ntL~~gq~L~~g~~L~--~g~~~L~~q~dGn---Lv---ly~~--~~~vW~snt~~~--~~~~~l~l~~dGNLvl~~~~~ 69 (109)
T 3dzw_A 2 NILYSGETLSPGEFLN--NGRYVFIMQEDCN---LV---LYDV--DKPIWATNTGGL--DRRCHLSMQSDGNLVVYSPRN 69 (109)
T ss_dssp CEEETTEEECTTCEEE--ETTEEEEECTTSC---EE---EEET--TEEEEECCCTTS--SSSCEEEECTTSCEEEECTTS
T ss_pred CCcCCCCEeCCCCEEE--CCCEEEEEcCCCc---EE---EEeC--CEEEEECCcccC--CCCEEEEEeCCCCEEEECCCC
Confidence 5899999999999997 7999999988764 32 2654 689999999876 345789999999999999989
Q ss_pred CeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeee
Q 003402 122 GTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQS 164 (823)
Q Consensus 122 ~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQS 164 (823)
.++|++++.+......|+|+|+|||||++. .||||
T Consensus 70 ~~~W~S~t~~~~~~~~~~L~ddGNlvly~~--------~~W~s 104 (109)
T 3dzw_A 70 NPIWASNTGGENGNYVCVLQKDRNVVIYGT--------ARWAT 104 (109)
T ss_dssp CEEEECCCCCSSSCEEEEECTTSCEEEEES--------CCCCC
T ss_pred CEEEECCCCCCCCCEEEEEeCCCEEEEECC--------CEEeC
Confidence 999999986433346799999999999973 48997
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-18 Score=200.17 Aligned_cols=172 Identities=13% Similarity=0.081 Sum_probs=125.4
Q ss_pred eeeeccccceeEEeeeecCCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 530 QSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG--------QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~--------~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++||+|+||.||+|+. .++.+|+|+...... ...+.|.+|++++++++||||+++..++...++.+||||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 47899999999999954 568899998643211 123568999999999999999977777778888899999
Q ss_pred cccCCCchhhccCCCc-----------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc-----cccccc
Q 003402 602 YMVNKSLDVFLFDPTK-----------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG-----NTKRIV 665 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~-----------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~-----~~~~~~ 665 (823)
|+++++|.+++..... .|...+.||+.++.||+.+. .+||+|||+|+......... ......
T Consensus 420 ~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~ 497 (540)
T 3en9_A 420 YINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVL 497 (540)
T ss_dssp CCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhc
Confidence 9999999999865110 02223334445556677676 99999999999875532211 124578
Q ss_pred ccccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCC
Q 003402 666 GTYGYMSPEYALE--GVFSVKSDVFSFGVLMLEILSSKKNT 704 (823)
Q Consensus 666 Gt~~YmAPE~~~~--~~~s~ksDVwSfGvvl~Elltg~~p~ 704 (823)
||+.|||||++.. ..|+.++|+||..+-.+|-+.++.++
T Consensus 498 GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 498 STHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 9999999999976 56888999999999999988777654
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
Probab=99.64 E-value=7.1e-16 Score=140.11 Aligned_cols=98 Identities=23% Similarity=0.404 Sum_probs=79.6
Q ss_pred CCCCCCCCceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccccc
Q 003402 96 NSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQG 175 (823)
Q Consensus 96 ~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpg 175 (823)
+.|+.+...+|.|..||+|+|.+. +++||++++.+......|+|+|+|||||+| + +.+|||||+
T Consensus 13 g~~L~~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~-----~~~~W~S~~--------- 76 (112)
T 1xd5_A 13 GGSLAEGGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-G-----SRAIWASNT--------- 76 (112)
T ss_dssp TCEEEETTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-T-----TEEEEECCC---------
T ss_pred CCEEeCCCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-C-----CEEEEECCc---------
Confidence 344545568999999999999987 889999998643345689999999999998 3 368999994
Q ss_pred ccccccccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEc-CCeeeeecCCCCC
Q 003402 176 MKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYN-GSAKYTCTGPWNG 233 (823)
Q Consensus 176 q~l~~~~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~-~~~~yw~sg~w~~ 233 (823)
+|++|.|++.|+++|. +++|. +..+||++++|+|
T Consensus 77 ----------------------~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g 111 (112)
T 1xd5_A 77 ----------------------NRQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG 111 (112)
T ss_dssp ----------------------CCSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred ----------------------cCCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence 4457889999999998 55665 4679999999986
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=136.97 Aligned_cols=105 Identities=20% Similarity=0.323 Sum_probs=84.0
Q ss_pred ccccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEe
Q 003402 39 LAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLN 118 (823)
Q Consensus 39 ~~~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d 118 (823)
.+.|+|.+||.|..|+.|+|. .|.|-|-..|+ |.+ |.. ++||++|++.. +..+.|.|..||||||.|
T Consensus 4 ~~~dtL~~gq~L~~g~~L~sg--~~~L~~q~dGn-----Lvl-~~~---~~vW~snt~~~--~~~~~l~l~~dGNLvl~d 70 (110)
T 3r0e_B 4 FTNNLLFSGQVLYGDGRLTAK--NHQLVMQGDCN-----LVL-YGG---KYGWQSNTHGN--GEHCFLRLNHKGELIIKD 70 (110)
T ss_dssp CBTTEEETTCEEETTEEEECS--SCEEEECTTSC-----EEE-ECS---SSCEECCCTTS--SSSCEEEECTTSCEEEEC
T ss_pred cccCEECCCCEecCCCEEEeC--CEEEEEcCCCe-----EEE-ECC---eEEEECCCcCC--CcCEEEEEeCCCcEEEEe
Confidence 367999999999999999984 58886644442 444 654 58999999863 334789999999999999
Q ss_pred CCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeee
Q 003402 119 QSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQS 164 (823)
Q Consensus 119 ~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQS 164 (823)
.++.++|++++........|.|+|+|||||++. .||+|
T Consensus 71 ~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~~--------~~W~t 108 (110)
T 3r0e_B 71 DDFKTIWSSRSSSKQGEYVLILQDDGFGVIYGP--------AIFET 108 (110)
T ss_dssp TTCCEEEECCCCCSSSCCEEEECTTSCEEEECS--------EEEES
T ss_pred CCCCEEEEcCCcCCCCCEEEEEcCCccEEEecC--------CEecC
Confidence 999999999986433446899999999999963 59986
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-15 Score=135.21 Aligned_cols=89 Identities=27% Similarity=0.352 Sum_probs=73.9
Q ss_pred CCceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccccccccccc
Q 003402 102 KNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWD 181 (823)
Q Consensus 102 ~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~ 181 (823)
...+|.+..||+|||.| .+++||++|+.+......++|+|+|||||+|.+ +.+|||||
T Consensus 20 ~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~-----~~~~W~S~---------------- 77 (110)
T 3a0c_A 20 PSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQS-----NRVIWQTK---------------- 77 (110)
T ss_dssp TTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTT-----CCEEEECC----------------
T ss_pred CCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCC-----CcEEEecC----------------
Confidence 45789999999999999 488999999864444568999999999999863 57999999
Q ss_pred ccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCCC
Q 003402 182 LRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPW 231 (823)
Q Consensus 182 ~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~w 231 (823)
+++++|.|++.|+++|. +++|++ .||+++++
T Consensus 78 ---------------t~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~ 108 (110)
T 3a0c_A 78 ---------------TNGKEDHYVLVLQQDRN--VVIYGP--VVWATGSG 108 (110)
T ss_dssp ---------------CCCSSSCCEEEECTTSC--EEEECS--EEEECSCC
T ss_pred ---------------CCCCCCCEEEEEeCCcc--EEEECC--CEecCCCc
Confidence 24567899999999998 556765 89999875
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.2e-14 Score=132.02 Aligned_cols=107 Identities=16% Similarity=0.297 Sum_probs=86.6
Q ss_pred cccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeC
Q 003402 40 AADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQ 119 (823)
Q Consensus 40 ~~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~ 119 (823)
+.|+|.+||.|..|+.|.+ |.|.|-|-..|+ |.++... ..++||.+|++.+ +....|.|..||||||.|.
T Consensus 5 ~~~tL~~gq~L~~g~~L~~--g~~~L~~q~dGN-----LvL~~~~-~~~~vWssnt~~~--~~~~~l~l~~dGNLVl~d~ 74 (113)
T 3mez_B 5 VRNVLFSSQVMYDNAQLAT--RDYSLVMRDDCN-----LVLTKGS-KTNIVWESGTSGR--GQHCFMRLGHSGELDITDD 74 (113)
T ss_dssp CSSEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEEEETT-TTEEEEECCCTTS--CSSCEEEECTTSCEEEECT
T ss_pred cCCEeCCCCEECCCCEeEc--CCEEEEEcCCCE-----EEEEECC-CCEEEEECCcccC--CcCEEEEEeCCCcEEEECC
Confidence 5789999999999999985 788888866553 5554321 2689999999876 2347899999999999999
Q ss_pred CCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeee
Q 003402 120 SNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQS 164 (823)
Q Consensus 120 ~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQS 164 (823)
++.++|++++........|.|+|+|||||++ ..||+|
T Consensus 75 ~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~--------~~~W~s 111 (113)
T 3mez_B 75 RLNTVFVSNTVGQEGDYVLILQINGQAVVYG--------PAVWST 111 (113)
T ss_dssp TSCEEEECSCCCSSSCCEEEECTTSCEEEEC--------SEEEES
T ss_pred CCCEEEECCCcCCCCCEEEEEcCCceEEEec--------CCEecC
Confidence 9999999998643344689999999999996 359997
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=132.35 Aligned_cols=86 Identities=26% Similarity=0.322 Sum_probs=71.8
Q ss_pred ceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccccccccccccc
Q 003402 104 GVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLR 183 (823)
Q Consensus 104 ~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~~ 183 (823)
.+|.+..||+|+|.+. +++||++|+........|+|+|+|||||+|. .+.+|||||
T Consensus 32 ~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~-----~~~~lW~S~------------------ 87 (119)
T 1b2p_A 32 YRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITN-----ENVTVWQSP------------------ 87 (119)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECT-----TCCEEEECS------------------
T ss_pred EEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeC-----CCcEEEcCC------------------
Confidence 5799999999999987 8899999986443457899999999999986 357999999
Q ss_pred CCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 184 TGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 184 ~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
++|++|.|++.|+++|. +++|+ .+||++|+
T Consensus 88 -------------~~~~~g~~~l~l~~~Gn--lvl~~--~~~W~Sg~ 117 (119)
T 1b2p_A 88 -------------VAGKAGHYVLVLQPDRN--VVIYG--DALWATQT 117 (119)
T ss_dssp -------------CCCCSSCEEEEECTTSC--EEEEE--SEEEECCC
T ss_pred -------------CCCCCCCEEEEEECCCc--EEEEC--ccEeCCCC
Confidence 35567899999999998 55565 38999986
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-14 Score=130.96 Aligned_cols=92 Identities=28% Similarity=0.394 Sum_probs=75.3
Q ss_pred CCceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccccccccccc
Q 003402 102 KNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWD 181 (823)
Q Consensus 102 ~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~ 181 (823)
....|.+..||+|+|.+ .+++||++|+........++|+|+|||||+|.+ +.++|||||+
T Consensus 20 g~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~-----~~~vW~S~~~-------------- 79 (115)
T 2dpf_A 20 GAYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHN-----NNDVWGSACW-------------- 79 (115)
T ss_dssp TTEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTT-----CCEEEECCCC--------------
T ss_pred CCEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCC-----ceEEEEcCCC--------------
Confidence 34789999999999998 588999999764434568999999999999863 5789999997
Q ss_pred ccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCCCCCc
Q 003402 182 LRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGV 234 (823)
Q Consensus 182 ~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~w~~~ 234 (823)
+++|.|++.|+++|+ +++|+. .||++++|...
T Consensus 80 -----------------~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~~~~ 111 (115)
T 2dpf_A 80 -----------------GDNGKYALVLQKDGR--FVIYGP--VLWSLGPNGCR 111 (115)
T ss_dssp -----------------CSSSCCEEEECTTSC--EEEECS--EEECSSTTCBC
T ss_pred -----------------CCCCCEEEEEeCCCe--EEEECC--CEEECCCCCCc
Confidence 346789999999998 556654 89999999643
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.7e-14 Score=127.82 Aligned_cols=102 Identities=21% Similarity=0.362 Sum_probs=83.4
Q ss_pred cccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeC
Q 003402 40 AADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQ 119 (823)
Q Consensus 40 ~~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~ 119 (823)
+.|||.+||.|..|+.| .+|.|.|.|...|+ | +.|.. +|.+|+..+ +....|+|..||+|||.|.
T Consensus 2 ~~dtL~~gq~L~~g~~L--~~g~~~L~~q~dGN-----L-vl~~~-----~Wssnt~~~--~~~~~l~l~~dGnLvl~d~ 66 (109)
T 3r0e_A 2 GTNYLLSGQTLDTEGHL--KNGDFDLVMQDDCN-----L-VLYNG-----NWQSNTANN--GRDCKLTLTDYGELVIKNG 66 (109)
T ss_dssp CCSEEETTCEECTTCEE--EETTEEEEECTTSC-----E-EEETT-----TEECCCTTS--CSSCEEEECTTSCEEEECT
T ss_pred ccCCcCCCCCcCCCCEe--ECCCEEEEEecCCe-----E-EEEeC-----eEEcCCCCC--CCcEEEEEcCCCeEEEEeC
Confidence 67999999999999999 57999999976654 2 23442 699998765 2357999999999999999
Q ss_pred CCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeee
Q 003402 120 SNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQS 164 (823)
Q Consensus 120 ~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQS 164 (823)
++.++|++++........|+|+|+|||||++ ..+|+|
T Consensus 67 ~~~~vWss~t~~~~~~~~~~L~~dGNlvly~--------~~~W~s 103 (109)
T 3r0e_A 67 DGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG--------PSVFKI 103 (109)
T ss_dssp TSCEEEECCCCCSSSCCEEEEETTTEEEEEC--------SEEEEE
T ss_pred CCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe--------cCEECC
Confidence 9999999988643345689999999999996 359997
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=8.9e-15 Score=155.72 Aligned_cols=140 Identities=15% Similarity=0.004 Sum_probs=99.5
Q ss_pred HHHHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCCh------------------hhHHHHHHHHHHHHhc
Q 003402 517 FASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG------------------QGLKEFKNEMMLIAKL 578 (823)
Q Consensus 517 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~------------------~~~~~f~~Ev~~l~~l 578 (823)
+..+......|++.+.||+|+||.||+|+..+++.||||.++.... .....+.+|+.+++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3344555566778899999999999999997799999999964321 1346799999999999
Q ss_pred CCCceeeEEeEEEeCCeEEEEEEcccCCCchhhccCCCcc-------------cccCHHHHHHHHhccccccCCCceece
Q 003402 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK-------------HLLGWQLRVRIIDGIAQDQHMNPKISD 645 (823)
Q Consensus 579 ~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-------------~~l~~~~r~~i~~~ia~d~~~~~KI~D 645 (823)
+ | +++.+++.. +..++||||+++|+|.+ +...... |..++.|++..+.||+.+ ++.+||+|
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 9 4 566665443 55699999999999998 4322111 112222333334566667 89999999
Q ss_pred eeceeecCCCcccccccccccccccccccccc
Q 003402 646 FGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677 (823)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~ 677 (823)
||+|+. +..|+|||++.
T Consensus 236 FG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 236 FPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp CTTCEE---------------TTSTTHHHHHH
T ss_pred CCCCeE---------------CCCCCHHHHHH
Confidence 999974 34578999874
|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=6.1e-12 Score=113.63 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=80.6
Q ss_pred ccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCC
Q 003402 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQS 120 (823)
Q Consensus 41 ~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~ 120 (823)
.|+|.+||.|..|+.|. +|.|.|-|-..|+ |. .|.. .. ||.+|+..+ +....|.|..||||||.|.+
T Consensus 2 ~~~l~~gq~L~~g~~L~--~g~~~L~~q~dGn-----Lv-l~~~--~~-vW~snt~~~--~~~~~l~l~~dGNLVl~~~~ 68 (111)
T 3mez_A 2 NNVLLTGDVIHTDNQLS--YESAAFVMQGDCN-----LV-LYNE--AG-GFQSNTHGR--GVDCTLRLNNRGQLEIHSAN 68 (111)
T ss_dssp TTEEETTCEECTTCEEE--ETTEEEEECTTSC-----EE-EECS--SC-CEECCCTTS--CSSCEEEECTTSCEEEECSS
T ss_pred cCEeCCCCEeCCCCEEe--cCCEEEEEccCCe-----EE-EECC--CC-EEECCcccC--CcCEEEEEcCCCcEEEEeCC
Confidence 47899999999999994 6899999966553 22 2543 34 999999876 23478999999999999988
Q ss_pred CC-eEEEeccc--CCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeee
Q 003402 121 NG-TIWSSNVS--REVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQS 164 (823)
Q Consensus 121 g~-~vWst~~~--~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQS 164 (823)
+. ++|+|++. .......+.|+|+|||||++ ..+|+|
T Consensus 69 ~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~--------~~~W~s 107 (111)
T 3mez_A 69 SNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG--------PAIWST 107 (111)
T ss_dssp CSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC--------SEEEEC
T ss_pred CCEEEEEeccccCCCCcCEEEEECCCCeEEEec--------cCEEcc
Confidence 76 59999863 22234679999999999995 358987
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.1e-11 Score=110.57 Aligned_cols=96 Identities=21% Similarity=0.270 Sum_probs=73.8
Q ss_pred CCCCCCCCCceEEEeeCCcEEEEeC-CCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccc
Q 003402 95 RNSPIVDKNGVLTVSNRGNLVLLNQ-SNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTML 173 (823)
Q Consensus 95 r~~Pv~~~~~~L~l~~~G~LvL~d~-~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlL 173 (823)
.+.|+.+...+|.+..||+|||.+. .+.++|++++........+.|+|+|||||+|.+ +.++|||=.+
T Consensus 17 ~g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~-----~~~iW~S~t~------ 85 (113)
T 3mez_B 17 DNAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDR-----LNTVFVSNTV------ 85 (113)
T ss_dssp TTCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTT-----SCEEEECSCC------
T ss_pred CCCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCC-----CCEEEECCCc------
Confidence 4667766678999999999999998 488999999864334568999999999999863 4689996221
Q ss_pred ccccccccccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 174 QGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 174 pgq~l~~~~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
...|.|.+.|+.+|...++ . .+.|.+|+
T Consensus 86 -------------------------~~~~~~~~~L~~dGnlvly--~--~~~W~s~~ 113 (113)
T 3mez_B 86 -------------------------GQEGDYVLILQINGQAVVY--G--PAVWSTAA 113 (113)
T ss_dssp -------------------------CSSSCCEEEECTTSCEEEE--C--SEEEESCC
T ss_pred -------------------------CCCCCEEEEEcCCceEEEe--c--CCEecCCC
Confidence 0134588999999987654 3 57898874
|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=4e-11 Score=108.29 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=72.0
Q ss_pred CCCCCCCCceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccccc
Q 003402 96 NSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQG 175 (823)
Q Consensus 96 ~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpg 175 (823)
+.++.+...+|.+..||||||.+.++ +|++++.+......++|+|+|||||++.++ ..++|||.-+
T Consensus 14 g~~L~~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~----~~~vW~S~t~-------- 79 (111)
T 3mez_A 14 DNQLSYESAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANS----NTPVWVYPRS-------- 79 (111)
T ss_dssp TCEEEETTEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSC----SSCSEEESSS--------
T ss_pred CCEEecCCEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCC----CEEEEEeccc--------
Confidence 44444455789999999999999876 999998643344689999999999998742 3359998721
Q ss_pred ccccccccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 176 MKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 176 q~l~~~~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
.....|.|.+.|+.+|...++ . .++|.+++
T Consensus 80 ---------------------~~~~~~~~~l~Lq~dGNlvly--~--~~~W~s~t 109 (111)
T 3mez_A 80 ---------------------VNTVRGNYAATLGPDQHVTIY--G--PAIWSTPA 109 (111)
T ss_dssp ---------------------CCCCSSCCEEEECTTSCEEEE--C--SEEEECCC
T ss_pred ---------------------cCCCCcCEEEEECCCCeEEEe--c--cCEEccCC
Confidence 011347899999999987664 3 68998875
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-10 Score=122.30 Aligned_cols=113 Identities=23% Similarity=0.393 Sum_probs=88.0
Q ss_pred ccccccCCCCC----cCCCCEEEeCCCeEEEeecCC--CCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCC
Q 003402 39 LAADTLTPTTL----IRDGETLVSPSQRFELGFFSP--GKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRG 112 (823)
Q Consensus 39 ~~~~~i~~g~~----l~~~~~lvS~~g~F~~GFf~~--~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G 112 (823)
..+||+.+|+. |..|+.|+| ...++-|+|.. ....+.+| |.+ ..+++|.+++..+- . ..|.+..+|
T Consensus 134 ~ptdtlLpg~~~~~~l~~g~~L~S-~~dps~G~fsl~l~~dGnlvL---y~~-~~~~yW~Sgt~~~~--~-~~l~l~~dG 205 (276)
T 3m7h_A 134 TPAIPLVPGAIDSLLLAPGSELVQ-GVVYGAGASKLVFQGDGNLVA---YGP-NGAATWNAGTQGKG--A-VRAVFQGDG 205 (276)
T ss_dssp CTTSCCCCSCTTCEEECSSEEECT-TCEEEETTEEEEECTTSCEEE---ECT-TSSEEEECCCTTTT--C-CEEEECTTS
T ss_pred ccccccccccccccccccCccccc-CCCCCCceEEEeecCCceEEE---EeC-CCeEEEECCCCCCc--c-EEEEEcCCC
Confidence 45789999999 888999866 46788888763 22233333 332 25899999998772 2 689999999
Q ss_pred cEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCC
Q 003402 113 NLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDY 167 (823)
Q Consensus 113 ~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~ 167 (823)
+|++.|.++.++|++++.+. ....|.|+|+|||||++. .++||||||
T Consensus 206 nLvl~d~~~~~vWsS~t~~~-~~~rl~Ld~dGnLvly~~-------~~~Wqsf~~ 252 (276)
T 3m7h_A 206 NLVVYGAGNAVLWHSHTGGH-ASAVLRLQANGSIAILDE-------KPVWARFGF 252 (276)
T ss_dssp CEEEECTTSCEEEECSCTTC-TTCEEEECTTSCEEEEEE-------EEEEESSSC
T ss_pred eEEEEeCCCcEEEEecCCCC-CCEEEEEcCCccEEEEcC-------CCeEEccCc
Confidence 99999998899999987642 357899999999999963 469999997
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=99.04 E-value=5.6e-10 Score=100.54 Aligned_cols=91 Identities=22% Similarity=0.292 Sum_probs=67.7
Q ss_pred CCCCCCceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccccccc
Q 003402 98 PIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMK 177 (823)
Q Consensus 98 Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~ 177 (823)
++......|.+..||+|+|.+. .++|++++.+......++|+|+|||||+|.+ +.++|||-.+-
T Consensus 20 ~L~sg~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~-----~~~iW~S~t~~--------- 83 (110)
T 3r0e_B 20 RLTAKNHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDD-----FKTIWSSRSSS--------- 83 (110)
T ss_dssp EEECSSCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTT-----CCEEEECCCCC---------
T ss_pred EEEeCCEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCC-----CCEEEEcCCcC---------
Confidence 3334457899999999999876 5899999864333468999999999999863 47899974310
Q ss_pred ccccccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 178 LGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 178 l~~~~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
..|.|.+.|+.+|+..++ . .+.|.+|+
T Consensus 84 ----------------------~~~~~~~~L~~dGNlvly--~--~~~W~t~~ 110 (110)
T 3r0e_B 84 ----------------------KQGEYVLILQDDGFGVIY--G--PAIFETSS 110 (110)
T ss_dssp ----------------------SSSCCEEEECTTSCEEEE--C--SEEEESCC
T ss_pred ----------------------CCCCEEEEEcCCccEEEe--c--CCEecCCC
Confidence 134588899999987654 4 37888764
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=97.80 Aligned_cols=87 Identities=22% Similarity=0.298 Sum_probs=66.6
Q ss_pred CceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccccccccccc
Q 003402 103 NGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDL 182 (823)
Q Consensus 103 ~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~ 182 (823)
..+|.+..||+|+|.+. +.++|++++.+......+.|+|+|||||+|.+ +.++|||....
T Consensus 20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~-----~~~~W~S~t~~-------------- 79 (109)
T 3dzw_A 20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPR-----NNPIWASNTGG-------------- 79 (109)
T ss_dssp TEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTT-----SCEEEECCCCC--------------
T ss_pred CEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCC-----CCEEEECCCCC--------------
Confidence 47899999999999987 78999999864333568999999999999863 46899975311
Q ss_pred cCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 183 RTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 183 ~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
..+.|.+.|+.+|+..++ .. +.|.+|+
T Consensus 80 -----------------~~~~~~~~L~ddGNlvly--~~--~~W~s~t 106 (109)
T 3dzw_A 80 -----------------ENGNYVCVLQKDRNVVIY--GT--ARWATGT 106 (109)
T ss_dssp -----------------SSSCEEEEECTTSCEEEE--ES--CCCCCCC
T ss_pred -----------------CCCCEEEEEeCCCEEEEE--CC--CEEeCCC
Confidence 124678899999987654 32 6787765
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=98.99 E-value=8.7e-10 Score=99.10 Aligned_cols=94 Identities=24% Similarity=0.359 Sum_probs=70.4
Q ss_pred CCCCCCCCCceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccc
Q 003402 95 RNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQ 174 (823)
Q Consensus 95 r~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLp 174 (823)
.+.|+.+....|.+..||||||.++ +|++++.+......++|.++|||||+|.+ +.++|+|- |
T Consensus 14 ~g~~L~~g~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~-----~~~vWss~-----t--- 76 (109)
T 3r0e_A 14 TEGHLKNGDFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNGD-----GSTVWKSG-----A--- 76 (109)
T ss_dssp TTCEEEETTEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECTT-----SCEEEECC-----C---
T ss_pred CCCEeECCCEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeCC-----CCEEEcCC-----C---
Confidence 3455555567899999999999885 79999875334568899999999999863 46889752 1
Q ss_pred cccccccccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCCCC
Q 003402 175 GMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWN 232 (823)
Q Consensus 175 gq~l~~~~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~w~ 232 (823)
....+.|.+.|+.+|+..++ . .+.|.+++|-
T Consensus 77 -----------------------~~~~~~~~~~L~~dGNlvly--~--~~~W~s~t~~ 107 (109)
T 3r0e_A 77 -----------------------QSVKGNYAAVVHPDGRLVVF--G--PSVFKIDPWV 107 (109)
T ss_dssp -----------------------CCSSSCCEEEEETTTEEEEE--C--SEEEEECTTS
T ss_pred -----------------------cCCCcCEEEEEcCCCeEEEE--e--cCEECCCCcc
Confidence 01235688999999976654 3 6889999883
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3.5e-10 Score=118.46 Aligned_cols=120 Identities=12% Similarity=0.063 Sum_probs=79.4
Q ss_pred cceeeeeccccceeEEeeee-cCCcE--EEEEEeccCChh------------------------hHHHHHHHHHHHHhcC
Q 003402 527 FSIQSKLGEGGFGPVYKGRL-LNGQE--VAVKRLSNQSGQ------------------------GLKEFKNEMMLIAKLQ 579 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~-~~~~~--VAVK~l~~~~~~------------------------~~~~f~~Ev~~l~~l~ 579 (823)
|++.+.||+|+||.||+|.. .+|+. ||||.++..... ....+.+|+.++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66789999999999999998 67888 999987542111 1236889999999998
Q ss_pred CCce--eeEEeEEEeCCeEEEEEEcccC-C----CchhhccCCCcc----------------c-ccCHHHHHHHHhcccc
Q 003402 580 HRNL--VRLLGCCIEQGEKILIYEYMVN-K----SLDVFLFDPTKK----------------H-LLGWQLRVRIIDGIAQ 635 (823)
Q Consensus 580 H~Ni--v~l~g~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~----------------~-~l~~~~r~~i~~~ia~ 635 (823)
|+++ ..++.+ +..+|||||+.+ | +|.++....... | ..++.|++..+.||+.
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl 204 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY 204 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE
Confidence 8764 344432 356899999953 4 565554321000 1 1122222333344554
Q ss_pred ccCCCceeceeeceeec
Q 003402 636 DQHMNPKISDFGMARMF 652 (823)
Q Consensus 636 d~~~~~KI~DFGla~~~ 652 (823)
+. .+||+|||+|...
T Consensus 205 ~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 205 ID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SS--SEEECCCTTCEET
T ss_pred cC--cEEEEECcccccC
Confidence 55 8999999999865
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
Probab=98.75 E-value=3.3e-08 Score=101.87 Aligned_cols=88 Identities=25% Similarity=0.281 Sum_probs=67.8
Q ss_pred CceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccccccccccc
Q 003402 103 NGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDL 182 (823)
Q Consensus 103 ~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~ 182 (823)
.-+|.+..+|+|+|.+. +++||.+|+... ....++|.++|||||+|.+ +.+||+|+++
T Consensus 27 ~f~l~f~~~gnl~ly~~-~~~vW~an~~~~-~~~~l~l~~dGnLvl~d~~-----~~~vW~s~~~--------------- 84 (236)
T 1dlp_A 27 SFRFTMQSDCNLVLFDS-DVRVWASNTAGA-TGCRAVLQSDGLLVILTAQ-----NTIRWSSGTK--------------- 84 (236)
T ss_dssp TEEEEECTTSCEEEEES-SSEEECCCCCSC-SCCBCCBCSSSCBCCBCTT-----TCCSCCCCCC---------------
T ss_pred CEEEEECCCCcEEEEEC-CEEEEECCCCCC-CCeEEEEcCCCcEEEEcCC-----CcEEEeCCcc---------------
Confidence 35788888999999886 789999997643 4567899999999999873 5789999874
Q ss_pred cCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCCCC
Q 003402 183 RTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWN 232 (823)
Q Consensus 183 ~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~w~ 232 (823)
.+.|.|.+.|+.+|+..++ .. .||.+..+.
T Consensus 85 ----------------~~~~~~~~~l~d~Gnlvl~--~~--~~W~S~~~p 114 (236)
T 1dlp_A 85 ----------------GSIGNYVLVLQPDRTVTIY--GP--GLWDSGTSN 114 (236)
T ss_dssp ----------------CCSSCCEEEECSSSCEEEE--CS--EEEECSCCC
T ss_pred ----------------ccCCcEEEEEeCCCCEEEe--cC--CEEECCCCC
Confidence 0235677888888886553 22 789887664
|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
Probab=98.67 E-value=1.1e-07 Score=84.65 Aligned_cols=77 Identities=26% Similarity=0.359 Sum_probs=59.4
Q ss_pred ceEEEeeCCcEEEEeCCCCeEEEecccCC-CCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccccccccccc
Q 003402 104 GVLTVSNRGNLVLLNQSNGTIWSSNVSRE-VKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDL 182 (823)
Q Consensus 104 ~~L~l~~~G~LvL~d~~g~~vWst~~~~~-~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~ 182 (823)
-+|.+..||||||.+. +.+||++|+..+ .....+.|.++|||||+|.+ +.+||+|=
T Consensus 21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~-----~~~vWss~----------------- 77 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSS-----GRSLWASH----------------- 77 (105)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECTT-----CCEEEECC-----------------
T ss_pred EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECCC-----cEEEEEec-----------------
Confidence 5799999999999985 679999998632 33467899999999999873 57889851
Q ss_pred cCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEE
Q 003402 183 RTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVC 217 (823)
Q Consensus 183 ~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~ 217 (823)
+....+.|.+.|+.+|+..++
T Consensus 78 --------------t~~~~~~~~l~L~ddGNlVly 98 (105)
T 4h3o_A 78 --------------STRGSGNYILILQDDGNVIIY 98 (105)
T ss_dssp --------------CCCCSSCEEEEECTTSCEEEE
T ss_pred --------------CCCCCCCEEEEEeCCCeEEEE
Confidence 112346788999999987654
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.39 E-value=2.4e-08 Score=109.58 Aligned_cols=92 Identities=10% Similarity=0.082 Sum_probs=59.0
Q ss_pred HHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC--------------hhhHHHH--------HHHHHHHHh
Q 003402 520 VTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--------------GQGLKEF--------KNEMMLIAK 577 (823)
Q Consensus 520 ~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~--------------~~~~~~f--------~~Ev~~l~~ 577 (823)
+.....-|++.++||+|+||.||+|...+|+.||||.++... ....... .+|...|.+
T Consensus 90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r 169 (397)
T 4gyi_A 90 HAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA 169 (397)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 333334488999999999999999999899999999875320 0011112 345666666
Q ss_pred cCCCceeeEEeEEEeCCeEEEEEEcccCCCchhhcc
Q 003402 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF 613 (823)
Q Consensus 578 l~H~Niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~ 613 (823)
+++.++.-..-+... ..+|||||+++++|..+..
T Consensus 170 L~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~ 203 (397)
T 4gyi_A 170 LYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS 203 (397)
T ss_dssp HHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC
T ss_pred HHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc
Confidence 654443211111112 2369999999998877653
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.001 Score=68.80 Aligned_cols=90 Identities=11% Similarity=-0.018 Sum_probs=73.2
Q ss_pred HHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEE
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~ 600 (823)
.....|.+...++.|+.+.||+.... ++.+++|............+.+|++++..++ |.++.++++++.+.+..++||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34467888889999999999999754 6889999986532122346889999999985 677889999999999999999
Q ss_pred EcccCCCchhhc
Q 003402 601 EYMVNKSLDVFL 612 (823)
Q Consensus 601 Ey~~~gsL~~~l 612 (823)
||+++.+|...+
T Consensus 90 e~i~G~~l~~~~ 101 (263)
T 3tm0_A 90 SEADGVLCSEEY 101 (263)
T ss_dssp ECCSSEEHHHHC
T ss_pred EecCCeehhhcc
Confidence 999999998764
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0027 Score=65.08 Aligned_cols=82 Identities=15% Similarity=0.113 Sum_probs=62.6
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCc--eeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN--LVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~N--iv~l~g~~~~~~~~~lV~Ey 602 (823)
.++.+....+.|..+.||+....+|..++||..... ....+.+|+.++..+++.+ +.+++++..+++..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 345543343456669999998777888999997653 2246788999999986545 45689988888889999999
Q ss_pred ccCCCch
Q 003402 603 MVNKSLD 609 (823)
Q Consensus 603 ~~~gsL~ 609 (823)
+++.+|.
T Consensus 97 i~G~~l~ 103 (264)
T 1nd4_A 97 VPGQDLL 103 (264)
T ss_dssp CSSEETT
T ss_pred cCCcccC
Confidence 9999885
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=93.07 E-value=0.086 Score=56.91 Aligned_cols=81 Identities=14% Similarity=0.229 Sum_probs=59.1
Q ss_pred eeeeeccccceeEEeeeecCCcEEEEEEec--cCC-hhhHHHHHHHHHHHHhcC--CCceeeEEeEEEeC---CeEEEEE
Q 003402 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLS--NQS-GQGLKEFKNEMMLIAKLQ--HRNLVRLLGCCIEQ---GEKILIY 600 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~--~~~-~~~~~~f~~Ev~~l~~l~--H~Niv~l~g~~~~~---~~~~lV~ 600 (823)
..+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+.++..++ +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35789999999999998754 678888775 321 122356888999999997 46688999998776 4589999
Q ss_pred EcccCCCchh
Q 003402 601 EYMVNKSLDV 610 (823)
Q Consensus 601 Ey~~~gsL~~ 610 (823)
||+++..+.+
T Consensus 121 e~v~G~~l~~ 130 (359)
T 3dxp_A 121 EFVSGRVLWD 130 (359)
T ss_dssp ECCCCBCCCC
T ss_pred EecCCeecCC
Confidence 9999988743
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=92.85 E-value=0.15 Score=53.12 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=57.9
Q ss_pred CcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCC---CceeeEEeEEEeCCeEEEEEEc
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH---RNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H---~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.+.-.+.+|.|..+.||+.++.+|+.|.||+-..........|..|++.|+.|.- --+.+.+++ . ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEe
Confidence 4555688999999999999999999999998765443334568899999888742 224455544 2 23789999
Q ss_pred ccCCCc
Q 003402 603 MVNKSL 608 (823)
Q Consensus 603 ~~~gsL 608 (823)
++.+..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 977654
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=90.38 E-value=0.96 Score=47.79 Aligned_cols=77 Identities=22% Similarity=0.159 Sum_probs=62.0
Q ss_pred ceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC---CCceeeEEeEEEeCCeEEEEEEccc
Q 003402 528 SIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ---HRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 528 ~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~---H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
.-.+.|+.|.+..+|+... ++..++||+.... ....|..|.+.|..+. ...+.++++++...+..++||||++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 3457899999999999876 4678888987542 3567889999888884 3568889999888889999999999
Q ss_pred CCCc
Q 003402 605 NKSL 608 (823)
Q Consensus 605 ~gsL 608 (823)
+..+
T Consensus 115 G~~~ 118 (312)
T 3jr1_A 115 KSKN 118 (312)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9865
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=88.62 E-value=0.45 Score=51.99 Aligned_cols=75 Identities=9% Similarity=0.148 Sum_probs=50.6
Q ss_pred eeeeccccceeEEeeeec-CCcEEEEEEeccCCh-------hhHHHHHHHHHHHHhcCC--Cc-eeeEEeEEEeCCeEEE
Q 003402 530 QSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-------QGLKEFKNEMMLIAKLQH--RN-LVRLLGCCIEQGEKIL 598 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-------~~~~~f~~Ev~~l~~l~H--~N-iv~l~g~~~~~~~~~l 598 (823)
.+.||.|.++.||+++.. +++.++||....... ...+.+..|.+++..+.+ +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 478999999999999764 468899998653211 123457789988887742 33 3456644 4555689
Q ss_pred EEEcccCC
Q 003402 599 IYEYMVNK 606 (823)
Q Consensus 599 V~Ey~~~g 606 (823)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=86.76 E-value=1.9 Score=43.82 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=61.6
Q ss_pred cCcceeeeeccccce-eEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFG-PVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG-~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~lV~E 601 (823)
..++. +.+..|..| .||+-.... +..+.||+-... ...++.+|...|+.+. +--+-++++++.+.+..++|||
T Consensus 25 ~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme 100 (272)
T 4gkh_A 25 YGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT 100 (272)
T ss_dssp TTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred cCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence 34443 455566666 689876654 567889986432 3457888999998884 3346788999999999999999
Q ss_pred cccCCCchhhc
Q 003402 602 YMVNKSLDVFL 612 (823)
Q Consensus 602 y~~~gsL~~~l 612 (823)
++++.++.+..
T Consensus 101 ~l~G~~~~~~~ 111 (272)
T 4gkh_A 101 AIPGKTAFQVL 111 (272)
T ss_dssp CCCSEEHHHHH
T ss_pred eeCCccccccc
Confidence 99998877654
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=85.73 E-value=0.088 Score=59.19 Aligned_cols=61 Identities=11% Similarity=0.130 Sum_probs=19.1
Q ss_pred eeeeeccccceeEEeeeecC-CcEEEE------EEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 003402 529 IQSKLGEGGFGPVYKGRLLN-GQEVAV------KRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE 592 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~~-~~~VAV------K~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~ 592 (823)
+.++|| ||.||+|.+.. ..+||| |..... +.+....|.+|..++...+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 346777 99999999864 367899 776542 22344578999999999999999999988654
|
| >2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* | Back alignment and structure |
|---|
Probab=82.77 E-value=0.91 Score=37.47 Aligned_cols=35 Identities=26% Similarity=0.498 Sum_probs=28.4
Q ss_pred cccChHHHHHHHhccCCceeeecccccCCCcceeeccc
Q 003402 371 ESMNLKECEAECLKNCSCRAYANSKVTDGGSGCLMWFG 408 (823)
Q Consensus 371 ~~~sl~~C~~~CL~nCsC~A~~~~~~~~~g~gC~~w~~ 408 (823)
...++++|++.|+.+=.|.||.|.. ....|+++.+
T Consensus 28 ~~~sl~~Cq~aC~a~~~C~aFTyN~---~s~~CflKs~ 62 (82)
T 2ll3_A 28 RASSLSECRARCQAEKECSHYTYNV---KSGLCYPKRG 62 (82)
T ss_dssp ECSSHHHHHHHHHHCTTEEEEEEET---TTTEEEEEES
T ss_pred cCCCHHHHHHHhhccCCCCeEEecc---CCCceEcccC
Confidence 3568999999999999999999863 2345998765
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=81.65 E-value=3 Score=43.63 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=56.2
Q ss_pred eeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCC---ceeeEEeEEE-eCCeEEEEEEcccC
Q 003402 530 QSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHR---NLVRLLGCCI-EQGEKILIYEYMVN 605 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~---Niv~l~g~~~-~~~~~~lV~Ey~~~ 605 (823)
.+.++.|....||+. +..++||.-. .......+.+|++++..+.+. .+.+.+.++. ..+..++||||+++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 367888999999987 5678888853 233456899999999999753 3556666664 34567899999999
Q ss_pred CCchh
Q 003402 606 KSLDV 610 (823)
Q Consensus 606 gsL~~ 610 (823)
..|..
T Consensus 98 ~~l~~ 102 (306)
T 3tdw_A 98 QILGE 102 (306)
T ss_dssp EECHH
T ss_pred eECch
Confidence 88865
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 823 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-54 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-53 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-53 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-51 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-50 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-48 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-48 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 8e-48 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-47 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-47 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-46 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-45 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-45 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-44 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-44 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-44 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-44 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 6e-44 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 7e-44 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-43 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-43 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-43 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-42 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-42 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-42 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 7e-42 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-41 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 6e-41 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 8e-41 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-38 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 6e-38 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-37 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-37 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 5e-36 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-35 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-35 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 4e-34 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 6e-34 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-32 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 5e-32 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-31 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-31 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 4e-31 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-30 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 4e-30 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-29 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-29 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-29 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-29 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-29 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 5e-28 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-27 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 9e-26 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-24 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-24 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-24 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-23 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 7e-23 | |
| d1kj1a_ | 109 | b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium | 1e-22 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 4e-22 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-21 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-21 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-16 | |
| d1jpca_ | 108 | b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan | 1e-15 | |
| d1dlpa2 | 120 | b.78.1.1 (A:116-235) Fetuin-binding protein Scafet | 1e-14 | |
| d1dlpa2 | 120 | b.78.1.1 (A:116-235) Fetuin-binding protein Scafet | 6e-09 | |
| d1xd5a_ | 112 | b.78.1.1 (A:) Gastrodianin (antifungal protein) {G | 1e-14 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 2e-14 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 4e-14 | |
| d1dlpa1 | 115 | b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p | 2e-09 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (476), Expect = 2e-54
Identities = 51/281 (18%), Positives = 116/281 (41%), Gaps = 38/281 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+G + ++ ++ SL L K + I AQ
Sbjct: 68 LFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS 124
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EG 679
+ + KI DFG+A + +++ G+ +M+PE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 680 VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
+S +SDV++FG+++ E+++ + ++ + + + L + +
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780
+ P ++ + C+++ ++RP +++ I +LP
Sbjct: 237 NCPKAMK--RLMAECLKKKRDERPLFPQILASIELLARSLP 275
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (468), Expect = 1e-53
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 40/270 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ ++G G FG V+ G LN +VA+K + + ++F E ++ KL H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L G C+EQ L++E+M + L +L ++ L + + + + +
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
++ K+SDFGM R D+ ++ + SPE +S
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYS 180
Query: 683 VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742
KSDV+SFGVLM E+ S K ++S + L P L +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNS-------EVVEDISTGFRLYKPRLAST---- 229
Query: 743 MLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ C +E EDRP S ++ +
Sbjct: 230 ---HVYQIMNHCWKERPEDRPAFSRLLRQL 256
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (463), Expect = 6e-53
Identities = 67/270 (24%), Positives = 109/270 (40%), Gaps = 40/270 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
++ + +LG G FG V G+ +VA+K + S EF E ++ L H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L G C +Q +I EYM N L +L + +H Q + + + +
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
+ K+SDFG++R DE + + PE + FS
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFS 179
Query: 683 VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742
KSD+++FGVLM EI S K + ++ + + L P L +E
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMP-------YERFTNSETAEHIAQGLRLYRPHLASE---- 228
Query: 743 MLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ + C E A++RPT ++S I
Sbjct: 229 ---KVYTIMYSCWHEKADERPTFKILLSNI 255
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (451), Expect = 4e-51
Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 40/272 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
RL + +I EYM N SL FL P+ L + + IA+
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
++ KI+DFG+AR+ +E + +PE G F+
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFPIKWTAPEAINYGTFT 188
Query: 683 VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742
+KSDV+SFG+L+ EI++ + + + + + +R + ++ P +
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI-------PYPGMTNPEVIQNLERGYRMVRP---DNCPEE 238
Query: 743 MLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ + LC +E EDRPT + S++ +
Sbjct: 239 L----YQLMRLCWKERPEDRPTFDYLRSVLED 266
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (444), Expect = 5e-50
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 40/283 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 75
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--------- 635
+L + ++ EYM SL FL T K+ L V + IA
Sbjct: 76 QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMN 133
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
+++ K++DFG+AR+ +E + +PE AL G F+
Sbjct: 134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFT 192
Query: 683 VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742
+KSDV+SFG+L+ E+ + + + + + L + +R + + P E
Sbjct: 193 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCP---PECPES 242
Query: 743 MLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785
+ ++ C ++ E+RPT + + + + + +P
Sbjct: 243 L----HDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 281
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 171 bits (435), Expect = 1e-48
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 40/273 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 75
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
V+LLG C + +I E+M +L +L + ++ + + + + I+
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEKK 134
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
++ K++DFG++R+ GD + + +PE F
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAYNKF 193
Query: 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741
S+KSDV++FGVL+ EI + + + + +EL++ + E
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSP--------------YPGIDLSQVYELLEKDYRMERPE 239
Query: 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ + C Q N DRP+ +++
Sbjct: 240 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 171 bits (434), Expect = 2e-48
Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 55/308 (17%)
Query: 515 FSFASVTAATENFS---------IQSKLGEGGFGPVYKGRLL----NGQEVAVKRL-SNQ 560
F+F A F+ I+ +G G FG V G L VA+K L S
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 561 SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL 620
+ + ++F +E ++ + H N++ L G + ++I E+M N SLD FL +
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF- 125
Query: 621 LGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQ 658
V ++ GIA + ++ K+SDFG++R D
Sbjct: 126 -TVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 659 GNTKRIVG---TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLL 715
+G + +PE F+ SDV+S+G++M E++S +
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE------------- 231
Query: 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ N ++ + + + L C Q++ RP +V+ ++
Sbjct: 232 -RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290
Query: 776 LFNLPSPK 783
+ N S K
Sbjct: 291 IRNPNSLK 298
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 170 bits (430), Expect = 8e-48
Identities = 49/298 (16%), Positives = 103/298 (34%), Gaps = 54/298 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+Q +G+G FG V++G+ G+EVAVK S++ + + E+ L+H N++
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENIL 60
Query: 585 RLLGCCIEQGEKI----LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
+ + L+ +Y + SL +L ++ + + +++ A
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHL 116
Query: 636 -------------------------DQHMNPKISDFGMARMF--GGDELQGNTKRIVGTY 668
++ I+D G+A D + VGT
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 669 GYMSPEYALEGV------FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF-----NLLGH 717
YM+PE + + ++D+++ G++ EI G++
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236
Query: 718 AWSLCKNDRAHELMDPVLQNEV-SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ + + + P + N S L + C N R T + ++
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (426), Expect = 1e-47
Identities = 63/279 (22%), Positives = 106/279 (37%), Gaps = 50/279 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G+G FG V G G +VAVK + N + + F E ++ +L+H NLV
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63
Query: 585 RLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+LLG +E+ + ++ EYM SL +L + +LG ++ + +
Sbjct: 64 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEGN 122
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ K+SDFG+ + E + +PE E F
Sbjct: 123 NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKF 177
Query: 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741
S KSDV+SFG+L+ EI S G L + K + +
Sbjct: 178 STKSDVWSFGILLWEIYS----FGRVPYPRIPLKDVVPRVEKGYK------MDAPDGCPP 227
Query: 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMI----NNEL 776
+ V C +A RP+ + + +EL
Sbjct: 228 AV----YEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 262
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (425), Expect = 2e-47
Identities = 60/291 (20%), Positives = 102/291 (35%), Gaps = 45/291 (15%)
Query: 523 ATENFSIQS-KLGEGGFGPVYKGRLL---NGQEVAVKRLSNQSGQG-LKEFKNEMMLIAK 577
+N I +LG G FG V +G +VA+K L + + +E E ++ +
Sbjct: 6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
L + +VRL+G C + +L+ E L FL K+ + ++ ++
Sbjct: 66 LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGM 122
Query: 636 --------------------DQHMNPKISDFGMARMFGGDELQGNTKR-IVGTYGYMSPE 674
KISDFG+++ G D+ + + +PE
Sbjct: 123 KYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 182
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734
FS +SDV+S+GV M E LS + + K ++
Sbjct: 183 CINFRKFSSRSDVWSYGVTMWEALSYGQ--------------KPYKKMKGPEVMAFIEQG 228
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785
+ E + C EDRP V + ++L S E
Sbjct: 229 KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 279
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 166 bits (422), Expect = 1e-46
Identities = 66/270 (24%), Positives = 108/270 (40%), Gaps = 42/270 (15%)
Query: 532 KLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRL 586
+G G FG VY G LL+ AVK L+ + G + +F E +++ H N++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 587 LGCCIE-QGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---------- 635
LG C+ +G +++ YM + L F+ + T + + +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 153
Query: 636 ----------DQHMNPKISDFGMARMFGGDELQGNTKR--IVGTYGYMSPEYALEGVFSV 683
D+ K++DFG+AR E + +M+ E F+
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 213
Query: 684 KSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPM 743
KSDV+SFGVL+ E+++ N L + R L+ P P+
Sbjct: 214 KSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRR---LLQP---EYCPDPL 263
Query: 744 LVRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 264 ----YEVMLKCWHPKAEMRPSFSELVSRIS 289
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (411), Expect = 2e-45
Identities = 59/284 (20%), Positives = 107/284 (37%), Gaps = 47/284 (16%)
Query: 525 ENFSIQSK-LGEGGFGPVYKGRLLN---GQEVAVKRLSNQSGQG--LKEFKNEMMLIAKL 578
+ +++ K LG G FG V KG + VAVK L N++ E E ++ +L
Sbjct: 6 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 65
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--- 635
+ +VR++G C E +L+ E L+ +L + + + + ++ ++
Sbjct: 66 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMK 121
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGNTK-RIVGTYGYMSPEY 675
KISDFG+++ DE + + +PE
Sbjct: 122 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735
FS KSDV+SFGVLM E S + + K +++
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQ--------------KPYRGMKGSEVTAMLEKGE 227
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNL 779
+ ++ LC + E+RP + V + N +++
Sbjct: 228 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 271
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (410), Expect = 2e-45
Identities = 64/288 (22%), Positives = 113/288 (39%), Gaps = 45/288 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSGQG-LKEFKNEMMLIAKL 578
+ Q +G G FG VYKG L VA+K L + +F E ++ +
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--- 635
H N++RL G + ++I EYM N +LD FL + K V ++ GIA
Sbjct: 67 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMK 124
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGNT-KRIVGTYGYMSPEY 675
+ ++ K+SDFG++R+ D T + +PE
Sbjct: 125 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 184
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735
F+ SDV+SFG++M E+++ + + N + ++
Sbjct: 185 ISYRKFTSASDVWSFGIVMWEVMTYGE--------------RPYWELSNHEVMKAINDGF 230
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ + + + C Q+ RP +D+VS+++ + S K
Sbjct: 231 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLK 278
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 161 bits (407), Expect = 1e-44
Identities = 61/298 (20%), Positives = 108/298 (36%), Gaps = 64/298 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGL-KEFKNEMMLIAK 577
N +GEG FG V++ R VAVK L ++ + +F+ E L+A+
Sbjct: 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL----------------- 620
+ N+V+LLG C L++EYM L+ FL + +
Sbjct: 73 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132
Query: 621 ----LGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGG 654
L ++ I +A ++M KI+DFG++R
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 192
Query: 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL 714
+ +M PE ++ +SDV+++GV++ EI S +
Sbjct: 193 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ-------PYYG 245
Query: 715 LGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ H + + L P L + N+ LC + DRP+ + ++
Sbjct: 246 MAHEEVIYYVRDGNILACP---ENCPLEL----YNLMRLCWSKLPADRPSFCSIHRIL 296
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (407), Expect = 1e-44
Identities = 62/305 (20%), Positives = 115/305 (37%), Gaps = 59/305 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE-----VAVKRLS-NQSGQGLKEFKNEMMLIAKL 578
F LG G FG VYKG + E VA+K L S + KE +E ++A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--- 635
+ ++ RLLG C+ LI + M L + K +G Q + IA+
Sbjct: 69 DNPHVCRLLGICLT-STVQLITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 125
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
+ KI+DFG+A++ G +E + + + +M+ E
Sbjct: 126 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
L +++ +SDV+S+GV + E+++ + +++ +
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGS--------------KPYDGIPASEISSILEKGER 231
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI--------------NNELFNLPSP 782
+ + + C +A+ RP +++ +E +LPSP
Sbjct: 232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSP 291
Query: 783 KEPPF 787
+ F
Sbjct: 292 TDSNF 296
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (407), Expect = 2e-44
Identities = 51/299 (17%), Positives = 99/299 (33%), Gaps = 60/299 (20%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGL-KEFKNEMMLIAKLQH 580
++F S+LG G G V+K +G +A K + + + + E+ ++ +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
+V G GE + E+M SLD L K + Q+ ++ + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ K+ DFG++ VGT YMSPE
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQ 176
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKK------NTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
+SV+SD++S G+ ++E+ + + + G A R
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 732 DPVLQNEVSLPMLVRYINVALL----------------------CVQENAEDRPTMSDV 768
+ PM + + ++ C+ +N +R + +
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 160 bits (405), Expect = 2e-44
Identities = 62/276 (22%), Positives = 110/276 (39%), Gaps = 52/276 (18%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQ 579
+ FS ++G G FG VY R + N + VA+K++S QS + ++ E+ + KL+
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
H N ++ GC + + L+ EY + + D+ K L + G Q
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAY 130
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ K+ DFG A + VGT +M+PE L
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANSFVGTPYWMAPEVIL 184
Query: 678 ---EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734
EG + K DV+S G+ +E+ + N + + + +N+ P
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELA-----ERKPPLFNMNAMSALYHIAQNES------PA 233
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770
LQ+ +++ C+Q+ +DRPT ++
Sbjct: 234 LQSGHWSEYFRNFVD---SCLQKIPQDRPTSEVLLK 266
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (399), Expect = 6e-44
Identities = 57/280 (20%), Positives = 92/280 (32%), Gaps = 50/280 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAK 577
++ + KLG+G FG V +G VAVK L + + +F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
L HRNL+RL G + ++ E SL L LLG R +
Sbjct: 68 LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQG-NTKRIVGTYGYMSPEYA 676
KI DFG+ R ++ + + + +PE
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
FS SD + FGV + E+ + + +++ + +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQ-----------------EPWIGLNGSQILHKIDK 229
Query: 737 NEVSLPMLVRY----INVALLCVQENAEDRPTMSDVVSMI 772
LP NV + C EDRPT + +
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (403), Expect = 7e-44
Identities = 62/302 (20%), Positives = 108/302 (35%), Gaps = 63/302 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQG-LKEFKNEMMLIAK 577
EN LG G FG V +VAVK L ++ + +E+ ++ +
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96
Query: 578 L-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK------------------ 618
L H N+V LLG C G LI+EY L +L +K
Sbjct: 97 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156
Query: 619 --HLLGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGG 654
++L ++ + +A+ KI DFG+AR
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 216
Query: 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL 714
D +M+PE EG++++KSDV+S+G+L+ EI S N
Sbjct: 217 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN----------- 265
Query: 715 LGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ + ++L+ + + + C ++ RP+ ++ S +
Sbjct: 266 --PYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323
Query: 775 EL 776
+L
Sbjct: 324 QL 325
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 1e-43
Identities = 55/297 (18%), Positives = 98/297 (32%), Gaps = 58/297 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQG-LKEFKNEMMLIAK 577
S LG G FG V + VAVK L + + +E+ +++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 578 L-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL---------------L 621
L H N+V LLG C G ++I EY L FL + L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 622 GWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQG 659
+ + +A+ KI DFG+AR D
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719
+M+PE V++ +SDV+S+G+ + E+ S +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS-------------PYP 249
Query: 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
+ + + ++++ + ++ C + RPT +V +I ++
Sbjct: 250 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (397), Expect = 1e-43
Identities = 55/276 (19%), Positives = 112/276 (40%), Gaps = 53/276 (19%)
Query: 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNL 583
++G G F VYKG EVA L ++ + + FK E ++ LQH N+
Sbjct: 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70
Query: 584 VRLLGCCIEQGEK----ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
VR + +L+ E M + +L +L + ++ ++ I +
Sbjct: 71 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQF 127
Query: 636 ---------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+ KI D G+A + K ++GT +M+PE
Sbjct: 128 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPE 183
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734
E + DV++FG+ MLE+ +S+ ++ +A + + R + P
Sbjct: 184 M-YEEKYDESVDVYAFGMCMLEMATSEYP--------YSECQNAAQIYR--RVTSGVKPA 232
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770
++V++P + + C+++N ++R ++ D+++
Sbjct: 233 SFDKVAIPEV---KEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (395), Expect = 2e-43
Identities = 57/284 (20%), Positives = 102/284 (35%), Gaps = 44/284 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLS-NQSGQGLKEFKNEMMLIAKLQHRN 582
E++ + LGEG +G V + VAVK + ++ + K E+ + L H N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+V+ G E + L EY L + + R +
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 636 ---------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
D+ N KISDFG+A +F + + ++ GT Y++PE
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 681 F-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
F + DV+S G+++ +L G D + +S K + + + +
Sbjct: 182 FHAEPVDVWSCGIVLTAML-----AGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 236
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ + + EN R T+ D+ + +N P K
Sbjct: 237 --------LALLHKILVENPSARITIPDIK---KDRWYNKPLKK 269
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 1e-42
Identities = 55/278 (19%), Positives = 105/278 (37%), Gaps = 50/278 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHR 581
E++ + +G G +G K R +G+ + K L + + + +E+ L+ +L+H
Sbjct: 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63
Query: 582 NLVRLLGCCIEQGEKIL--IYEYMVNKSLDVFLFDPTKKH-LLGWQLRVRIIDGIAQ--- 635
N+VR I++ L + EY L + TK+ L + +R++ +
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 636 ------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
D N K+ DFG+AR+ D K VGT YM
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT--SFAKAFVGTPYYM 181
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
SPE ++ KSD++S G L+ E+ + +F+ A + +
Sbjct: 182 SPEQMNRMSYNEKSDIWSLGCLLYEL-----CALMPPFTAFSQKELAGKIREGKF----- 231
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
+ S + + + RP++ +++
Sbjct: 232 -RRIPYRYSDEL----NEIITRMLNLKDYHRPSVEEIL 264
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (391), Expect = 2e-42
Identities = 64/299 (21%), Positives = 111/299 (37%), Gaps = 52/299 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLS-NQSGQGLKEFKNEMMLIAK 577
E ++ +LG+G FG VY+G VA+K ++ S + EF NE ++ +
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL-------LGWQLRVRII 630
++VRLLG + ++I E M L +L +++
Sbjct: 80 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139
Query: 631 DGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668
IA + KI DFGM R + + +
Sbjct: 140 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 199
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728
+MSPE +GVF+ SDV+SFGV++ EI + + + N++
Sbjct: 200 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE--------------QPYQGLSNEQVL 245
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPF 787
+ + + +C Q N + RP+ +++S I E+ P +E F
Sbjct: 246 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM--EPGFREVSF 302
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (388), Expect = 4e-42
Identities = 65/321 (20%), Positives = 116/321 (36%), Gaps = 62/321 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG---QEVAVKRLS-NQSGQGLKEFKNEMMLIAKL-Q 579
+ Q +GEG FG V K R+ + A+KR+ S ++F E+ ++ KL
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------------FDPTKKHLLGWQLR 626
H N++ LLG C +G L EY + +L FL + L Q
Sbjct: 70 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129
Query: 627 VRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGNTKRI 664
+ +A+ ++ KI+DFG++R
Sbjct: 130 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMG 186
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN 724
+M+ E V++ SDV+S+GVL+ EI+S + + A K
Sbjct: 187 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG-------TPYCGMTCAELYEKL 239
Query: 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKE 784
+ + L P + ++ C +E +RP+ + ++ +N L +
Sbjct: 240 PQGYRLEKP---LNCDDEV----YDLMRQCWREKPYERPSFAQILVSLNRML-----EER 287
Query: 785 PPFTTFTKGKNMKYSSNSTSG 805
+ T + Y+ S
Sbjct: 288 KTYVNTTLYEKFTYAGIDCSA 308
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (386), Expect = 7e-42
Identities = 56/276 (20%), Positives = 108/276 (39%), Gaps = 42/276 (15%)
Query: 516 SFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMML 574
S SV + ++ K+G+G G VY + GQEVA+++++ Q + NE+++
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA 634
+ + ++ N+V L + E ++ EY+ S L D + + +
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS----LTDVVTETCMDEGQIAAVCRECL 126
Query: 635 Q----------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
Q + K++DFG + Q +VGT +M+
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYWMA 184
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732
PE + K D++S G++ +E++ G + N L + + N
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMI-----EGEPPYLNENPLRALYLIATNGT------ 233
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
P LQN L + R + C+ + E R + ++
Sbjct: 234 PELQNPEKLSAIFR--DFLNRCLDMDVEKRGSAKEL 267
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (382), Expect = 2e-41
Identities = 45/273 (16%), Positives = 102/273 (37%), Gaps = 45/273 (16%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
+ + I +LG+G FG VYK + A K + +S + L+++ E+ ++A H N
Sbjct: 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 70
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+V+LL + ++ E+ ++D + + + L +
Sbjct: 71 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHD 128
Query: 636 ---------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL--- 677
+ K++DFG++ + ++ +GT +M+PE +
Sbjct: 129 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCET 186
Query: 678 --EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735
+ + K+DV+S G+ ++E+ N + + K++
Sbjct: 187 SKDRPYDYKADVWSLGITLIEMA-----EIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW 241
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
+ + C+++N + R T S +
Sbjct: 242 SSNF--------KDFLKKCLEKNVDARWTTSQL 266
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 6e-41
Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 45/277 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQ 579
E + +GEG FG V++G ++ VA+K N + ++E F E + + +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
H ++V+L+G E +I E L F +K+ L + ++
Sbjct: 67 HPHIVKLIGVITE-NPVWIIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ K+ DFG++R + +M+PE
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESIN 182
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F+ SDV+ FGV M EIL GV + +R +
Sbjct: 183 FRRFTSASDVWMFGVCMWEILM----HGVKPFQGVKNNDVIGRIENGER------LPMPP 232
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ ++ C + RP +++ + ++
Sbjct: 233 NCPPTL----YSLMTKCWAYDPSRRPRFTELKAQLST 265
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (375), Expect = 8e-41
Identities = 57/274 (20%), Positives = 95/274 (34%), Gaps = 53/274 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSN---QSGQGLKEFKNEMMLIAKLQH 580
E+F I LG+G FG VY R + +A+K L + + + E+ + + L+H
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
N++RL G + LI EY ++ L +K Q I +A
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYC 122
Query: 636 -----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
KI+DFG + + GT Y+ PE
Sbjct: 123 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEG 178
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
+ K D++S GVL E L K + + E + + E
Sbjct: 179 RMHDEKVDLWSLGVLCYEFLVGK------------------PPFEANTYQETYKRISRVE 220
Query: 739 VSLPMLV--RYINVALLCVQENAEDRPTMSDVVS 770
+ P V ++ ++ N RP + +V+
Sbjct: 221 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 254
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 4e-38
Identities = 59/295 (20%), Positives = 106/295 (35%), Gaps = 59/295 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL--------NGQEVAVKRL-SNQSGQGLKEFKNEMMLI 575
+ + LGEG FG V + +VAVK L S+ + + L + +EM ++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL-------------L 621
+ +H+N++ LLG C + G +I EY +L +L L L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132
Query: 622 GWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQG 659
+ V +A+ + KI+DFG+AR +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719
T +M+PE + +++ +SDV+SFGVL+ EI + +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG--------------SPY 238
Query: 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ +L+ + + + C RPT +V ++
Sbjct: 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (356), Expect = 6e-38
Identities = 62/296 (20%), Positives = 99/296 (33%), Gaps = 57/296 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQG-LKEFKNEM-MLIA 576
+ + LG G FG V + + VAVK L + + +E+ +LI
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 577 KLQHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFLF-------------DPTKKHLLG 622
H N+V LLG C + G +++ E+ +L +L + K L
Sbjct: 73 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132
Query: 623 WQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGN 660
+ + +A+ + KI DFG+AR D
Sbjct: 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 192
Query: 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS 720
+M+PE + V++++SDV+SFGVL+ EI S +
Sbjct: 193 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA----SPYPGVKIDEEFCR 248
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K D L C RPT S++V + N L
Sbjct: 249 RLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 1e-37
Identities = 50/269 (18%), Positives = 98/269 (36%), Gaps = 43/269 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQH 580
E+F LGEG F V R L +E A+K L + + E ++++L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----FDPTKKHLLGWQL--------RV 627
V+L + + Y N L ++ FD T ++
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 628 RII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
II + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 187
Query: 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741
SD+++ G ++ ++++ + + + +++ E
Sbjct: 188 CKSSDLWALGCIIYQLVAGL------------------PPFRAGNEYLIFQKIIKLEYDF 229
Query: 742 P--MLVRYINVALLCVQENAEDRPTMSDV 768
P + ++ + +A R ++
Sbjct: 230 PEKFFPKARDLVEKLLVLDATKRLGCEEM 258
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 142 bits (358), Expect = 1e-37
Identities = 53/308 (17%), Positives = 101/308 (32%), Gaps = 49/308 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+++ I +LG G FG V++ G A K + + + E+ ++ L+H L
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
V L + E ++IYE+M L + D + + + V + + +
Sbjct: 86 VNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 143
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
+ K+ DFG+ + + K GT + +PE A
Sbjct: 144 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGK 200
Query: 680 VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
+D++S GVL +LS F +L MD + +
Sbjct: 201 PVGYYTDMWSVGVLSYILLSGLS--------PFGGENDDETLRNVKSCDWNMDDSAFSGI 252
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDV-----VSMINNELFN--LPSPKEPPFTTFTK 792
S + + + R T+ ++ N + +PS + K
Sbjct: 253 SEDG----KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIK 308
Query: 793 GKNMKYSS 800
K +
Sbjct: 309 TKYDAWPE 316
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 136 bits (343), Expect = 5e-36
Identities = 54/313 (17%), Positives = 106/313 (33%), Gaps = 50/313 (15%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHR 581
+ + + LG G F V + VA+K ++ ++ +G +NE+ ++ K++H
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------ 635
N+V L G LI + + L + +K + R+I +
Sbjct: 68 NIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVKYLH 124
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
D+ ISDFG+++M + GT GY++PE
Sbjct: 125 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPEVL 181
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
+ +S D +S GV+ +L G N + K + D
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILL-----CGYPPFYDENDAKLFEQILKAEYE---FDSPYW 233
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDV-----VSMINNELFNLPSPKEPPFTTFT 791
+++S + ++++ E R T ++ N+
Sbjct: 234 DDISDSA----KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNF 289
Query: 792 KGKNMKYSSNSTS 804
K + N+T+
Sbjct: 290 AKSKWKQAFNATA 302
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 135 bits (341), Expect = 2e-35
Identities = 51/317 (16%), Positives = 102/317 (32%), Gaps = 60/317 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+ + I +LG G FG V++ G+ K ++ KNE+ ++ +L H L
Sbjct: 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+ L ++ E +LI E++ L + + + + + + +
Sbjct: 89 INLHDAFEDKYEMVLILEFLSGGELFDRIA--AEDYKMSEAEVINYMRQACEGLKHMHEH 146
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
+ + KI DFG+A DE+ K T + +PE
Sbjct: 147 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDRE 203
Query: 680 VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
+D+++ GVL +LS S + E + V + +
Sbjct: 204 PVGFYTDMWAIGVLGYVLLSGL------------------SPFAGEDDLETLQNVKRCDW 245
Query: 740 SLPMLVRY------INVALLCVQENAEDRPTMSDVVSM------INNELFNLPSPKEPPF 787
+ +Q+ R T+ D + +N +PS +
Sbjct: 246 EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKI 305
Query: 788 TTFTKGKNMKYSSNSTS 804
K K + + +
Sbjct: 306 RQKIKEKYADWPAPQPA 322
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 133 bits (336), Expect = 3e-35
Identities = 48/290 (16%), Positives = 93/290 (32%), Gaps = 39/290 (13%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+ + K+G G FG +Y G + G+EVA+K ++ + E + +Q +
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIP 66
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR--VRIIDGIA--------- 634
+ C +G+ ++ ++ SL+ ++K L L ++I I
Sbjct: 67 TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 126
Query: 635 ------------QDQHMNPKISDFGMARMFGGDELQGN-----TKRIVGTYGYMSPEYAL 677
+ I DFG+A+ + + K + GT Y S L
Sbjct: 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL 186
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
S + D+ S G +++ + S K E++ +
Sbjct: 187 GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPS 246
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPF 787
E C +D+P S + + N + F
Sbjct: 247 EF--------ATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVF 288
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 129 bits (326), Expect = 4e-34
Identities = 55/277 (19%), Positives = 99/277 (35%), Gaps = 47/277 (16%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG---LKEFKNEMMLIAKLQ 579
++ + + LG GG V+ R L ++VAVK L + F+ E A L
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 580 HRNLVRLLGCCIEQGEKI----LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
H +V + + ++ EY+ +L + + + + +I Q
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 122
Query: 636 ----------------------DQHMNPKISDFGMARMFG-GDELQGNTKRIVGTYGYMS 672
K+ DFG+AR T ++GT Y+S
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732
PE A +SDV+S G ++ E+L TG + + A+ + D +
Sbjct: 183 PEQARGDSVDARSDVYSLGCVLYEVL-----TGEPPFTGDSPVSVAYQHVREDP---IPP 234
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRP-TMSDV 768
+S + V L + +N E+R T +++
Sbjct: 235 SARHEGLSADL----DAVVLKALAKNPENRYQTAAEM 267
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (328), Expect = 6e-34
Identities = 53/334 (15%), Positives = 112/334 (33%), Gaps = 64/334 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E + I LG G FG V++ + + K + + G K E+ ++ +HRN+
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNI 63
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+ L E ++I+E++ + + T L + V + + +
Sbjct: 64 LHLHESFESMEELVMIFEFISGLDIFERIN--TSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
+ KI +FG AR + N + + Y +PE
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHD 178
Query: 680 VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
V S +D++S G L+ +LS + + ++++ ++ E
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGI------------------NPFLAETNQQIIENIMNAEY 220
Query: 740 SLPMLVRY------INVALLCVQENAEDRPTMSDV---------VSMINNELFNLPSPKE 784
+ ++ + + + R T S+ + ++ ++ +
Sbjct: 221 TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRR 280
Query: 785 PPFTTFTKGKNMKYSSNSTSGTSEFCSVNDVTVS 818
T K NM S+ S S V+V+
Sbjct: 281 YYHTLIKKDLNMVVSAARISCGGAIRSQKGVSVA 314
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 2e-32
Identities = 55/286 (19%), Positives = 101/286 (35%), Gaps = 41/286 (14%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHR 581
++ S +GEG +G V +N VA+K++S Q + E+ ++ + +H
Sbjct: 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------ 635
N++ + + + Y+V + L+ K L + I +
Sbjct: 67 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNT-KRIVGTYGYMSPEYALE 678
+ + KI DFG+AR+ D V T Y +PE L
Sbjct: 127 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 186
Query: 679 GVFSVKS-DVFSFGVLMLEILSSK-----KNTGVYNTDSFNLLG----HAWSLCKNDRAH 728
KS D++S G ++ E+LS++ K+ +LG + N +A
Sbjct: 187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 246
Query: 729 E-LMDPVLQNEVSLPMLVRYINVALL-----CVQENAEDRPTMSDV 768
L+ +N+V L + L + N R +
Sbjct: 247 NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 5e-32
Identities = 51/272 (18%), Positives = 84/272 (30%), Gaps = 52/272 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKN----EMMLIAKLQ 579
E+F + LG+G FG V+ Q A+K L + + + +L +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
H L + + + EY+ L + H I
Sbjct: 62 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQF 118
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
D+ + KI+DFGM + + + NT GT Y++PE L
Sbjct: 119 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGTPDYIAPEILL 176
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
++ D +SFGVL+ E+L + S EL + +
Sbjct: 177 GQKYNHSVDWWSFGVLLYEMLIGQ------------------SPFHGQDEEELFHSIRMD 218
Query: 738 EVSLPMLVRYINVALL--CVQENAEDRPTMSD 767
P + LL E R +
Sbjct: 219 NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG 250
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 1e-31
Identities = 51/307 (16%), Positives = 97/307 (31%), Gaps = 68/307 (22%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRL------SNQSGQGLKEFKNEMMLIAK 577
+ + +LG G F V K R G + A K + S++ G ++ + E+ ++ +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQ 637
+QH N++ L + + ILI E + L +K L + + I
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELF---DFLAEKESLTEEEATEFLKQILNGV 126
Query: 638 HM--------------------------NPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
+ KI DFG+A K I GT ++
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFV 183
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
+PE +++D++S GV+ +LS D E +
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGAS------------------PFLGDTKQETL 225
Query: 732 DPVLQNEVSLPMLVR------YINVALLCVQENAEDRPTMSDV-----VSMINNELFNLP 780
V + + ++ + R T+ D + + +
Sbjct: 226 ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 285
Query: 781 SPKEPPF 787
+ P F
Sbjct: 286 AWSHPQF 292
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 121 bits (305), Expect = 2e-31
Identities = 48/282 (17%), Positives = 101/282 (35%), Gaps = 43/282 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRN 582
E + K+GEG +G VYK + G+ A+K RL + E+ ++ +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+V+L + +L++E++ + + L + +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 636 ---------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EG 679
++ KI+DFG+AR FG + + T Y +P+ +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH--EIVTLWYRAPDVLMGSK 176
Query: 680 VFSVKSDVFSFGVLMLEILSSK-------------KNTGVYNTDSFNLLGHAWSLCKNDR 726
+S D++S G + E+++ + + T + + L K D
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 727 AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
+ +P+ + I++ ++ + R T
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 121 bits (305), Expect = 4e-31
Identities = 41/296 (13%), Positives = 90/296 (30%), Gaps = 45/296 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
++ + ++GEG FG +++G LLN Q+VA+K +S + ++E L
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+ + ++G ++ ++ SL+ L + +
Sbjct: 63 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHEK 120
Query: 636 -------------------DQHMNPKISDFGMARMFGGDELQGN-----TKRIVGTYGYM 671
+ DFGM + + + + K + GT YM
Sbjct: 121 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 180
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
S L S + D+ + G + + L G + + +
Sbjct: 181 SINTHLGREQSRRDDLEALGHVFMYFL-----RGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPF 787
+Y++ + P + + + L L + ++ F
Sbjct: 236 PLRELCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSKVLERLNTTEDENF 288
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 120 bits (302), Expect = 2e-30
Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQH 580
++F I LG G FG V+ R NG+ A+K L + + ++ +E ++++ + H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII---------- 630
++R+ G + + +I +Y+ L L + + +
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 123
Query: 631 ---------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ I D++ + KI+DFG A+ + T + GT Y++PE +
Sbjct: 124 DIIYRDLKPENILLDKNGHIKITDFGFAK-----YVPDVTYTLCGTPDYIAPEVVSTKPY 178
Query: 682 SVKSDVFSFGVLMLEILSSKK 702
+ D +SFG+L+ E+L+
Sbjct: 179 NKSIDWWSFGILIYEMLAGYT 199
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 4e-30
Identities = 49/296 (16%), Positives = 91/296 (30%), Gaps = 69/296 (23%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE------FKNEMMLIAKLQ 579
+ + LG GGFG VY G + + VA+K + E E++L+ K+
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 580 --HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
++RLL +LI E T++ L +L + +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQVLEAV 123
Query: 636 ---------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
K+ DFG + GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPE 179
Query: 675 YAL-EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733
+ + V+S G+L+ +++ E +
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGD------------------------IPFEHDEE 215
Query: 734 VLQNEVSLPMLV--RYINVALLCVQENAEDRPTMSDVVSMINNELF-NLPSPKEPP 786
+++ +V V ++ C+ DRPT ++ N+ ++ P+E
Sbjct: 216 IIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI---QNHPWMQDVLLPQETA 268
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 119 bits (299), Expect = 1e-29
Identities = 58/271 (21%), Positives = 94/271 (34%), Gaps = 50/271 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNE---MMLIAK 577
+FS+ +G GGFG VY R G+ A+K L + QG NE + L++
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
+V + + I + M L L + + I
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIILGL 120
Query: 636 --------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
D+H + +ISD G+A F + VGT+GYM+PE
Sbjct: 121 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEV 176
Query: 676 ALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734
+GV + +D FS G ++ ++L + T + + DR M
Sbjct: 177 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI---------DRMTLTMAVE 227
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTM 765
L + S P L + +Q + R
Sbjct: 228 LPDSFS-PELRSLLE---GLLQRDVNRRLGC 254
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 1e-29
Identities = 58/297 (19%), Positives = 99/297 (33%), Gaps = 50/297 (16%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKE-----FKNEMMLIAKLQHRNLVR 585
LGEG F VYK R N Q VA+K++ K+ E+ L+ +L H N++
Sbjct: 5 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64
Query: 586 LLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---------- 635
LL + L++++M +L + Q
Sbjct: 65 LLDAFGHKSNISLVFDFMETDLEV---IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 121
Query: 636 ------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GVFS 682
D++ K++DFG+A+ FG V T Y +PE ++
Sbjct: 122 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NRAYTHQVVTRWYRAPELLFGARMYG 179
Query: 683 VKSDVFSFGVLMLEILSSK-----KNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
V D+++ G ++ E+L + T F LG D ++
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239
Query: 738 EVSLPMLVRYINVA-----LL--CVQENAEDRPTMSDVVSMINNELF-NLPSPKEPP 786
+P+ + L+ N R T + + + F N P P
Sbjct: 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA---LKMKYFSNRPGPTPGC 293
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 2e-29
Identities = 55/320 (17%), Positives = 104/320 (32%), Gaps = 63/320 (19%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+++ +G G FG VY+ +L +G+ VA+K++ + E+ ++ KL H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76
Query: 585 RLLGCCIEQGEK------ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ--- 635
RL GEK L+ +Y+ V K L + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 636 --------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
K+ DFG A+ E + + + Y +PE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPEL 193
Query: 676 ALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDS--------FNLLGHAWSLCKNDR 726
++ DV+S G ++ E+L + ++ DS +LG +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 727 AHELMDPVLQNEVSLPMLVRY--------INVALLCVQENAEDRPTMSDV-----VSMIN 773
+ + P + I + ++ R T + +
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 774 NELFNLPS-PKEPPFTTFTK 792
+ LP+ P FT
Sbjct: 311 DPNVKLPNGRDTPALFNFTT 330
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 2e-29
Identities = 55/283 (19%), Positives = 101/283 (35%), Gaps = 43/283 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------ 635
N+V+LL + + L++E++ D + + L + + Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE-YALE 678
+ K++DFG+AR FG V T Y +PE
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH--EVVTLWYRAPEILLGC 177
Query: 679 GVFSVKSDVFSFGVLMLEILSSK-------------KNTGVYNTDSFNLLGHAWSLCKND 725
+S D++S G + E+++ + + T + S+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
+ ++V P+ ++ + + R +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 115 bits (289), Expect = 3e-29
Identities = 45/289 (15%), Positives = 94/289 (32%), Gaps = 69/289 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGL---------KEFKNEMML 574
EN+ + LG G V + +E AVK + G + E+ +
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 575 IAKLQ-HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGI 633
+ K+ H N+++L L+++ M L +L T+K L + +I+ +
Sbjct: 63 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 119
Query: 634 AQ----------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYM 671
+ D MN K++DFG + E + + GT Y+
Sbjct: 120 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYL 176
Query: 672 SPEYALEGV------FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725
+PE + + + D++S GV+M +L+ +
Sbjct: 177 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS------------------PPFWHR 218
Query: 726 RAHELMDPVLQNEVSLPMLVR------YINVALLCVQENAEDRPTMSDV 768
+ ++ ++ ++ + + R T +
Sbjct: 219 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (282), Expect = 5e-28
Identities = 53/289 (18%), Positives = 99/289 (34%), Gaps = 46/289 (15%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLL--NGQEVAVKRLSNQSGQG--LKEFKNE---MMLI 575
A + + +++GEG +G V+K R L G+ VA+KR+ Q+G+ E + +
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLD---VFLFDPTKKHLLGWQLRVRIIDG 632
+H N+VRL C +V + +D D + + + ++
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124
Query: 633 IAQ----------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGY 670
+ + K++DFG+AR++ Q +V T Y
Sbjct: 125 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWY 181
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN-TGVYNTDSFNLL--------GHAWSL 721
+PE L+ ++ D++S G + E+ K G + D + W
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALL--CVQENAEDRPTMSDV 768
Q + + LL C+ N R +
Sbjct: 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 1e-27
Identities = 57/311 (18%), Positives = 114/311 (36%), Gaps = 53/311 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHR 581
+ +K+G+G FG V+K R GQ+VA+K++ N+ E+ ++ L+H
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 582 NLVRLLGCCIEQGEKI--------LIYEYMVNKSLDVFLFDPTKKHL------------- 620
N+V L+ C + L++++ + + K L
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 621 LGWQLRVRIIDG------IAQDQHMNPKISDFGMARMFGGDELQGNTKR--IVGTYGYMS 672
L + R +I+ + + K++DFG+AR F + + V T Y
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 189
Query: 673 PEYAL-EGVFSVKSDVFSFGVLMLEILSSKK-NTGVYNTDSFNLL--------GHAWSLC 722
PE L E + D++ G +M E+ + G L+ W
Sbjct: 190 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 249
Query: 723 KNDRAHELMDPVLQNEVSLPMLVRY-------INVALLCVQENAEDRPTMSDVVSMINNE 775
N +E ++ V + + ++ +++ + + R D +N++
Sbjct: 250 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA---LNHD 306
Query: 776 LF-NLPSPKEP 785
F + P P +
Sbjct: 307 FFWSDPMPSDL 317
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 9e-26
Identities = 55/305 (18%), Positives = 107/305 (35%), Gaps = 51/305 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHR 581
+ +G G +G V G +VA+K+L QS K E+ L+ ++H
Sbjct: 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77
Query: 582 NLVRLLGCCIEQGEKILIYE-YMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
N++ LL + Y+V + L K LG ++ + +
Sbjct: 78 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137
Query: 636 -----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
++ KI DFG+AR + V T Y +PE L
Sbjct: 138 HAAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMTGYVVTRWYRAPEVILN 192
Query: 679 GV-FSVKSDVFSFGVLMLEILSSK-----KNTGVYNTDSFNLLG----HAWSLCKNDRAH 728
+ ++ D++S G +M E+++ K + + + G ++D A
Sbjct: 193 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252
Query: 729 ELMDPVLQNE-VSLPMLVRYINVALL-----CVQENAEDRPTMSDVVSMINNELF-NLPS 781
M + + E ++ + + + +AE R T + + + F +L
Sbjct: 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA---LAHPYFESLHD 309
Query: 782 PKEPP 786
++ P
Sbjct: 310 TEDEP 314
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 1e-24
Identities = 46/280 (16%), Positives = 102/280 (36%), Gaps = 37/280 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
+ + K+GEG +G V+K + + VA+K RL + E+ L+ +L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR-IIDGIAQ----- 635
N+VRL + L++E+ F + + ++ G+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 636 -------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
+++ K+++FG+AR F G ++ + +V + ++S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 683 VKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMD-------P 733
D++S G + E+ ++ + G D + ++ + P
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 734 VLQNEVSLPMLVRYINVALL-----CVQENAEDRPTMSDV 768
+ SL +V +N ++ N R + +
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 1e-24
Identities = 41/276 (14%), Positives = 91/276 (32%), Gaps = 49/276 (17%)
Query: 525 ENFSIQSK-LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHR 581
+++ + S+ LG G G V + ++ A+K L + + + E+ L + Q
Sbjct: 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCP 65
Query: 582 NLVRLLGCC----IEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-- 635
++VR++ + +++ E + L + D + + I+ I +
Sbjct: 66 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF-TEREASEIMKSIGEAI 124
Query: 636 -----------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
+ K++DFG A+ T Y++
Sbjct: 125 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVA 181
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732
PE + D++S GV+M + G S + L + + R +
Sbjct: 182 PEVLGPEKYDKSCDMWSLGVIMYIL-----LCGYPPFYSNHGLAISPGMKTRIRMGQYEF 236
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
P + + I ++ R T+++
Sbjct: 237 PNPEWSEVSEEVKMLIR---NLLKTEPTQRMTITEF 269
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (256), Expect = 2e-24
Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 31/203 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQH 580
+F LG+G FG V R G+ A+K L + + + E ++ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
L L + EY L L +++ + + I
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYL 121
Query: 636 -----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
D+ + KI+DFG+ + D K GT Y++PE +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLED 179
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+ D + GV+M E++ +
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 100 bits (249), Expect = 2e-23
Identities = 40/288 (13%), Positives = 101/288 (35%), Gaps = 50/288 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRN 582
+++ + KLG G + V++ + N ++V VK L K+ K E+ ++ L+ N
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPN 91
Query: 583 LVRLLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKKHLLGW------------QLRVR 628
++ L + + L++E++ N T + + + +
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIM 151
Query: 629 IIDGIAQ-----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GVFS 682
D +H ++ D+G+A + + V + + PE ++ ++
Sbjct: 152 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELLVDYQMYD 208
Query: 683 VKSDVFSFGVLMLEILSSKKNTGVYNTDS------FNLLGHAWSLCKNDRAHELMDPVLQ 736
D++S G ++ ++ K+ + + +LG D+ + +DP
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 268
Query: 737 NEVSLPMLVRYINVALL----------------CVQENAEDRPTMSDV 768
+ + R+ ++ + + R T +
Sbjct: 269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.0 bits (243), Expect = 7e-23
Identities = 57/272 (20%), Positives = 99/272 (36%), Gaps = 43/272 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLS----NQSGQGLKEFKNEMMLIA 576
ENF + LG G +G V+ R + G+ A+K L Q + + + E ++
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 577 KLQHR-NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----- 630
++ LV L + + LI +Y+ L L + Q+ V I
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143
Query: 631 --------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
+ I D + + ++DFG+++ F DE + GT YM+P+
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIV 202
Query: 677 LEGV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734
G D +S GVLM E+L+ F + G S + R +P
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGAS--------PFTVDGEKNSQAEISRRILKSEPP 254
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMS 766
E+S + I + ++ + R
Sbjct: 255 YPQEMS-ALAKDLIQ---RLLMKDPKKRLGCG 282
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Score = 91.6 bits (227), Expect = 1e-22
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 13/118 (11%)
Query: 50 IRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVS 109
+ +GE L Q ++ + ++ + ++ T VW +N K +
Sbjct: 4 LTNGEGL-YAGQSLDVEPYHFIMQEDCNLVLYD---HSTSVWASNTGIL-GKKGCKAVLQ 58
Query: 110 NRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDY 167
+ GN V+ + ++W+S+ R N V L ++GN+VI + +W + Y
Sbjct: 59 SDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD--------IWSTGTY 108
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.6 bits (239), Expect = 4e-22
Identities = 46/202 (22%), Positives = 74/202 (36%), Gaps = 28/202 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHR 581
+ + +G G G V + + VA+K+LS Q+ K E++L+ + H+
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 582 NLVRLLGCCIEQG------EKILIYEYMVNKSLDVFLFDPTKK----------------H 619
N++ LL Q + L+ E M V + + H
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 620 LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
G R I KI DFG+AR G + V T Y +PE L
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGM 193
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+ D++S G +M E++ K
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHK 215
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.6 bits (234), Expect = 2e-21
Identities = 62/306 (20%), Positives = 104/306 (33%), Gaps = 51/306 (16%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQH 580
E + S +G G +G V G VAVK+LS QS K E+ L+ ++H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 581 RNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ---- 635
N++ LL Y+V + L + K L +I I +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
++ KI DFG+AR V T Y +PE L
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIML 191
Query: 678 EGV-FSVKSDVFSFGVLMLEILSSK-------------KNTGVYNTDSFNLLGHAWSLCK 723
+ ++ D++S G +M E+L+ + + T LL S
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251
Query: 724 NDRAHELMDPVLQNEVSLPMLVRYINVALL--CVQENAEDRPTMSDVVSMINNELF-NLP 780
+ L N ++ + + V LL + +++ R T + + + F
Sbjct: 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA---LAHAYFAQYH 308
Query: 781 SPKEPP 786
P + P
Sbjct: 309 DPDDEP 314
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 93.7 bits (232), Expect = 3e-21
Identities = 39/203 (19%), Positives = 71/203 (34%), Gaps = 34/203 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQH 580
+ F LG G FG V + +G A+K L Q + ++ NE ++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
LV+L + ++ EY+ + L + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 636 -----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
DQ +++DFG A+ +G T + GT ++PE L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEALAPEIILS 212
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
++ D ++ GVL+ E+ +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 79.7 bits (195), Expect = 2e-16
Identities = 29/213 (13%), Positives = 71/213 (33%), Gaps = 39/213 (18%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+ + KLG G F V+ + ++N VA+K + + ++E+ L+ ++ + +
Sbjct: 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTK 73
Query: 586 LLGCCIEQGEKILIY---------------EYMVNKSLDVFLFDPTKKHLLGWQLRV--R 628
K+L + E + L + + L + ++ +
Sbjct: 74 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 133
Query: 629 IIDGIAQDQH--------------------MNPKISDFGMARMFGGDELQGNTKRIVGTY 668
++ G+ + +A + + + T
Sbjct: 134 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 193
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
Y SPE L + +D++S L+ E+++
Sbjct: 194 EYRSPEVLLGAPWGCGADIWSTACLIFELITGD 226
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Score = 71.2 bits (174), Expect = 1e-15
Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 20/126 (15%)
Query: 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVD 101
+ L + GE L F + ++ D +W N
Sbjct: 2 NILYSGETLSTGEFLNY--GSFVFIMQEDCN-----LVLYD---VDKPIWATNTGGL--S 49
Query: 102 KNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYL 161
++ L++ GNLV+ N SN IW+SN + N V L + N+VI
Sbjct: 50 RSCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTD--------R 101
Query: 162 WQSFDY 167
W + +
Sbjct: 102 WATGTH 107
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 68.8 bits (168), Expect = 1e-14
Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 9/97 (9%)
Query: 80 IWYQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVA 138
I Y D + + L++ NLVL ++ + +WS+N + + A
Sbjct: 12 ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRA 70
Query: 139 QLLDNGNLVIRDNSGSNSTESYLWQSFD--YPTDTML 173
L NG + + N +W S + +
Sbjct: 71 VLQPNGRMDVLTNQN-----IAVWTSGNSRSAGRYVF 102
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 52.6 bits (126), Expect = 6e-09
Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 5/110 (4%)
Query: 43 TLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDK 102
L T + + +Q +L + + + ++ + D VW N+
Sbjct: 12 ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR---DDRVWS--TNTAGKGT 66
Query: 103 NGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNS 152
+ G + +L N +W+S SR V L + NL I +
Sbjct: 67 GCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAIYGGA 116
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Score = 68.3 bits (166), Expect = 1e-14
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 18/130 (13%)
Query: 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIV 100
+D L + G +L + + + Y + VW + N
Sbjct: 1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCNL------VLYD--NNRAVWASGTNGKAS 50
Query: 101 DKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESY 160
VL + N GNLV+ + + IW+SN +R+ N L + N+VI DNS +
Sbjct: 51 GC--VLKMQNDGNLVIYSG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNSN-----NA 102
Query: 161 LWQSFDYPTD 170
+W + +
Sbjct: 103 IWATHTNVGN 112
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 70.6 bits (172), Expect = 2e-14
Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 25/148 (16%)
Query: 528 SIQSKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLK--------EFKNEMMLIAK 577
+I +GEG V+ E VK ++ + S + +K F + A+
Sbjct: 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62
Query: 578 LQHRNLVRLLGCCI----EQGEKILIYEYMVNKSLDVFLFDPTKK----------HLLGW 623
+ R L +L G + ++ E + K L + +
Sbjct: 63 NEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHR 122
Query: 624 QLRVR-IIDGIAQDQHMNPKISDFGMAR 650
+ + I DF +
Sbjct: 123 GIVHGDLSQYNVLVSEEGIWIIDFPQSV 150
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 67.3 bits (164), Expect = 4e-14
Identities = 21/138 (15%), Positives = 43/138 (31%), Gaps = 22/138 (15%)
Query: 30 IFYWVIKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTV 89
I + L T + ++ + + + + Y +
Sbjct: 3 IIFSKQPDDNHPQILHAT----ESLEILFGTHVYRFIMQTDCNL------VLYD--NNNP 50
Query: 90 VWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIR 149
+W N + G LV++ N T+W S V+ + + V L + N+VI
Sbjct: 51 IWATNTGGL--GNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIY 108
Query: 150 DNSGSNSTESYLWQSFDY 167
++ LW +
Sbjct: 109 GDA--------LWATQTV 118
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 54.2 bits (130), Expect = 2e-09
Identities = 29/130 (22%), Positives = 43/130 (33%), Gaps = 22/130 (16%)
Query: 35 IKFSLAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVAN 94
I F L+ + P TL ++L S F S + ++ D VW +N
Sbjct: 3 ILFGLSHEGSHPQTLHAA-QSLELSS--FRFTMQSDCN-----LVLFD---SDVRVWASN 51
Query: 95 RNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGS 154
+ + G LV+L N WSS + N V L + + I
Sbjct: 52 TAG---ATGCRAVLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGPG-- 106
Query: 155 NSTESYLWQS 164
LW S
Sbjct: 107 ------LWDS 110
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 823 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.98 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.98 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.97 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.97 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.97 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.97 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.97 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.97 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.97 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.96 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.96 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.93 | |
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 99.81 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 99.78 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 99.78 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 99.67 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.55 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 99.44 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.32 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.17 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 98.91 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 98.87 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 98.78 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 98.76 | |
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 98.51 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 91.15 | |
| d1emoa2 | 39 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 89.42 | |
| d1xkba1 | 39 | Factor X, N-terminal module {Human (Homo sapiens) | 87.86 | |
| d2vj3a2 | 39 | Neurogenic locus notch homolog protein 1, Notch1 { | 86.54 | |
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 85.79 | |
| d2vj3a3 | 35 | Neurogenic locus notch homolog protein 1, Notch1 { | 82.88 | |
| d1edmb_ | 39 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 81.88 | |
| d1lmja2 | 42 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 80.98 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-42 Score=360.61 Aligned_cols=233 Identities=26% Similarity=0.375 Sum_probs=170.3
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|++.++||+|+||+||+|++.+++.||||+++.. ....++|.+|++++++++|||||+++|+|.+.+..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 578999999999999999999988899999999764 3456789999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|+|.+++.... ..+.+..+..++ .||..++++.+||+|||+|+.+...... ...
T Consensus 84 ~g~L~~~l~~~~--~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~-~~~ 160 (263)
T d1sm2a_ 84 HGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SST 160 (263)
T ss_dssp TCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred CCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCce-eec
Confidence 999999986543 234454444433 3444478999999999999987544322 223
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
...||+.|||||++.+..|+.|+|||||||++|||+|++.|+..... ...+...... .. ....+..
T Consensus 161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~~~~~~~i~~---~~----------~~~~p~~ 226 (263)
T d1sm2a_ 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-NSEVVEDIST---GF----------RLYKPRL 226 (263)
T ss_dssp ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-HHHHHHHHHH---TC----------CCCCCTT
T ss_pred ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-HHHHHHHHHh---cC----------CCCCccc
Confidence 46799999999999999999999999999999999996555432211 1112111111 10 0111222
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...++.+++..||+.||++||||+||+++|+..
T Consensus 227 ~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i 259 (263)
T d1sm2a_ 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259 (263)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 345788999999999999999999999999865
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-41 Score=357.63 Aligned_cols=242 Identities=23% Similarity=0.382 Sum_probs=175.1
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.++||+|+||+||+|++.+ .||||+++.. ..+..++|.+|+.++++++|||||+++|++.+ +..+||||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 4678899999999999999998743 6999999643 34567889999999999999999999999765 56799999
Q ss_pred cccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcccc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
||++|+|.+++..... .+.+..+..++ .||+.+.++.+||+|||+|+.........
T Consensus 84 y~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999965332 24444444333 34445889999999999998876544444
Q ss_pred ccccccccccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 660 NTKRIVGTYGYMSPEYALE---GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~---~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
......||+.|||||++.. ..|+.|+|||||||+||||+||+.||....... .+.... ..+. ..+.+
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~-~~~~~~----~~~~----~~p~~- 231 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFMV----GRGY----LSPDL- 231 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHH----HHTS----CCCCG-
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH-HHHHHH----hcCC----CCCcc-
Confidence 4556789999999999864 458999999999999999999999985432211 111111 1111 11111
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCC
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~ 780 (823)
...+......+.+++..||+.||++||||+||+++|+.....+|
T Consensus 232 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P 275 (276)
T d1uwha_ 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275 (276)
T ss_dssp GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence 11222334578889999999999999999999999987654444
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-41 Score=361.59 Aligned_cols=239 Identities=25% Similarity=0.382 Sum_probs=183.5
Q ss_pred HHHhcCcceeeeeccccceeEEeeeecC-CcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 521 TAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 521 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
+...++|++.++||+|+||+||+|++.. ++.||||+++.. ....++|.+|++++++++|||||+++|+|.+++..++|
T Consensus 13 ei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (287)
T d1opja_ 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91 (287)
T ss_dssp BCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred EecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence 3455789999999999999999998864 889999999754 34567899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHH----------------------HhccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRI----------------------IDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i----------------------~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||||++|+|..++..... ..+.+..+..+ +.||+.++++.+||+|||+|+....+..
T Consensus 92 ~E~~~~g~l~~~l~~~~~-~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~ 170 (287)
T d1opja_ 92 TEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 170 (287)
T ss_dssp EECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS
T ss_pred eecccCcchHHHhhhccc-cchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCc
Confidence 999999999999864322 23444443333 3445558899999999999998755433
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
. ......||+.|||||++.+..|+.|+|||||||++|||++|+.|+..... ...+ ......+ ...
T Consensus 171 ~-~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-~~~~----~~~i~~~---------~~~ 235 (287)
T d1opja_ 171 T-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQV----YELLEKD---------YRM 235 (287)
T ss_dssp E-EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHH----HHHHHTT---------CCC
T ss_pred e-eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-HHHH----HHHHhcC---------CCC
Confidence 2 22335689999999999999999999999999999999998777532211 1111 1111111 111
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
..+.....++.+++..||+.||++||||.||++.|+...
T Consensus 236 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~ 274 (287)
T d1opja_ 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 274 (287)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 222334567889999999999999999999999998753
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-40 Score=350.68 Aligned_cols=234 Identities=29% Similarity=0.393 Sum_probs=179.2
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
.++|++.++||+|+||+||+|++.+++.||||+++.. ....++|.+|++++++++|||||+++|++.+ +..++||||+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence 4678999999999999999999988889999999764 3446789999999999999999999998855 5678999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++|+|.+++.... ...+.+..+..++. ||+.++++.+||+|||+|+.+...... ..
T Consensus 90 ~~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~-~~ 167 (272)
T d1qpca_ 90 ENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AR 167 (272)
T ss_dssp TTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-CC
T ss_pred CCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccc-cc
Confidence 9999999875432 12355655555443 344478999999999999987654332 23
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||++.++.++.|+|||||||+||||+||+.|+..... ...+.... ..+. ....+.
T Consensus 168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~-~~~~~~~i----~~~~---------~~~~p~ 233 (272)
T d1qpca_ 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPEVIQNL----ERGY---------RMVRPD 233 (272)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHH----HTTC---------CCCCCT
T ss_pred cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC-HHHHHHHH----HhcC---------CCCCcc
Confidence 346799999999999999999999999999999999997766532221 11111111 1110 011122
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....++.+++..||+.||++||||++|+++|+..
T Consensus 234 ~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ 267 (272)
T d1qpca_ 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (272)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence 2345688899999999999999999999999864
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-40 Score=342.47 Aligned_cols=231 Identities=27% Similarity=0.387 Sum_probs=180.6
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|++.++||+|+||+||+|++++++.||||.++... ...++|++|+.++++++|||||+++|+|.+++..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 6789999999999999999999888899999998643 345789999999999999999999999999999999999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|+|..++..... .+.+..+..++. ||..++++.+||+|||+|+.+...... ...
T Consensus 83 ~g~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~ 159 (258)
T d1k2pa_ 83 NGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSV 159 (258)
T ss_dssp TEEHHHHHHSGGG--CCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC-CCC
T ss_pred CCcHHHhhhcccc--CCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCce-eec
Confidence 9999999765432 344444444433 333478899999999999877554332 233
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...||+.|||||.+.+..++.|+|||||||++|||+| |+.|+...... .+... . ..+. . ...+.
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~--~~~~~---i-~~~~--~-------~~~p~ 224 (258)
T d1k2pa_ 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEH---I-AQGL--R-------LYRPH 224 (258)
T ss_dssp CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHH---H-HTTC--C-------CCCCT
T ss_pred ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH--HHHHH---H-HhCC--C-------CCCcc
Confidence 4679999999999999999999999999999999998 78787543221 11111 1 1110 0 11122
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.....+.+++..||+.||++||||.+|++.|..
T Consensus 225 ~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 225 LASEKVYTIMYSCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence 233578899999999999999999999999854
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-40 Score=349.34 Aligned_cols=240 Identities=26% Similarity=0.374 Sum_probs=178.6
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEccc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMV 604 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~ 604 (823)
++|++.+.||+|+||+||+|++.+++.||||+++.. ....++|.+|+.++++++|||||+++|+|.+ +..++||||++
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~ 94 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 94 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence 679999999999999999999988889999999754 3455789999999999999999999999854 56789999999
Q ss_pred CCCchhhccCCCcccccCHHHHHHHHhccc----------------------cccCCCceeceeeceeecCCCccccccc
Q 003402 605 NKSLDVFLFDPTKKHLLGWQLRVRIIDGIA----------------------QDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 605 ~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia----------------------~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
+|+|..++.... ...+.|..+..++.+|+ .|.++++||+|||+|+.+...... ...
T Consensus 95 ~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~ 172 (285)
T d1fmka3 95 KGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQ 172 (285)
T ss_dssp TCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCce-eec
Confidence 999998886432 12366666666654443 378899999999999987544322 233
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
...||+.|||||++.++.++.|+|||||||++|||+||+.|+...... ..++.... .+. ..+.+..
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-~~~~~~i~----~~~---------~~~~~~~ 238 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVE----RGY---------RMPCPPE 238 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHH----TTC---------CCCCCTT
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-HHHHHHHH----hcC---------CCCCCcc
Confidence 467999999999999999999999999999999999987775432221 11211111 110 1112233
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccCCCCCC
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSP 782 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~p 782 (823)
...++.+++.+||+.||++||+|.+|+++|+......+.+
T Consensus 239 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~ 278 (285)
T d1fmka3 239 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 278 (285)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred cCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCC
Confidence 4457889999999999999999999999999876555433
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-40 Score=348.72 Aligned_cols=233 Identities=23% Similarity=0.277 Sum_probs=174.7
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||+||+|+.. +++.||||+++... .+..++|.+|++++++++|||||++++++.+++..+|||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 67999999999999999999875 58999999997543 23456799999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
+++|+|.++|...... |..+..||+.++.||+.++++.+||+|||+|+.+..+........
T Consensus 85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~ 164 (271)
T d1nvra_ 85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164 (271)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccc
Confidence 9999999998653221 112222333344566668899999999999998755443444456
Q ss_pred ccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHH
Q 003402 664 IVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~ 742 (823)
.+||+.|||||++.+..+ +.++|||||||+||||+||+.|+.........+... ..... . ......
T Consensus 165 ~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~-----~~~~~--~------~~~~~~ 231 (271)
T d1nvra_ 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT--Y------LNPWKK 231 (271)
T ss_dssp CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH-----HTTCT--T------STTGGG
T ss_pred eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH-----hcCCC--C------CCcccc
Confidence 789999999999988886 578999999999999999999986433222111111 11000 0 001112
Q ss_pred HHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 743 MLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 743 ~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 232 IDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2356778999999999999999999865
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-40 Score=354.95 Aligned_cols=235 Identities=23% Similarity=0.381 Sum_probs=168.8
Q ss_pred cCcceeeeeccccceeEEeeeecC-C---cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-G---QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~---~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.++||+|+||+||+|++.. + ..||||.+... .....++|.+|+++|++++|||||+++|+|.+++..++|
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv 105 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII 105 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 457788999999999999998753 2 36999998754 344567899999999999999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
||||++|+|.+++..... .+.+..+..++ .||+.+.++.+||+|||+|+.+.....
T Consensus 106 ~Ey~~~g~L~~~~~~~~~--~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~ 183 (299)
T d1jpaa_ 106 TEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 183 (299)
T ss_dssp EECCTTEEHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EEecCCCcceeeeccccC--CCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCC
Confidence 999999999998865322 35555554444 344447899999999999998755432
Q ss_pred cc---ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 658 QG---NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 658 ~~---~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
.. ......||+.|||||.+.++.++.++|||||||+||||+| |+.|+..... ..+.... ..+
T Consensus 184 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~--~~~~~~i----~~~-------- 249 (299)
T d1jpaa_ 184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN--QDVINAI----EQD-------- 249 (299)
T ss_dssp ------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH----HTT--------
T ss_pred cceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH--HHHHHHH----HcC--------
Confidence 21 2223468999999999999999999999999999999998 7888753321 1111111 111
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.....+......+.+++.+||+.||++||||.||+++|+..+
T Consensus 250 -~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l 291 (299)
T d1jpaa_ 250 -YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291 (299)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 011122334567889999999999999999999999998753
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-40 Score=349.27 Aligned_cols=234 Identities=24% Similarity=0.331 Sum_probs=177.9
Q ss_pred hcCcceee-eeccccceeEEeeeec---CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQS-KLGEGGFGPVYKGRLL---NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~-~LG~G~fG~Vy~g~~~---~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|.+.+ +||+|+||+||+|.+. ++..||||.++... ....++|.+|+++|++++|||||+++|+|.+ +..+|
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l 85 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 85 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence 35677777 5999999999999764 34579999997543 4456789999999999999999999999864 56899
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|||||++|+|.+++.... ..+++..+..++ .||..+.++.+||+|||+|+.+....
T Consensus 86 vmE~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~ 163 (285)
T d1u59a_ 86 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 163 (285)
T ss_dssp EEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEEeCCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccc
Confidence 999999999999985432 234554444443 34444788999999999999886543
Q ss_pred c-ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 657 L-QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 657 ~-~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
. ........||+.|||||++..+.++.|+|||||||++|||+| |+.||...... .+... ...+..
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~~----i~~~~~------- 230 (285)
T d1u59a_ 164 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAF----IEQGKR------- 230 (285)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHH----HHTTCC-------
T ss_pred cccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHHH----HHcCCC-------
Confidence 2 223334679999999999999999999999999999999998 89998543221 11111 111111
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+.+...+..+.+++..||+.||++||||.+|++.|+..
T Consensus 231 --~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~ 269 (285)
T d1u59a_ 231 --MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 269 (285)
T ss_dssp --CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 112233446788999999999999999999999998765
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-40 Score=349.32 Aligned_cols=235 Identities=25% Similarity=0.384 Sum_probs=170.8
Q ss_pred cCcceeeeeccccceeEEeeeecCC-----cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNG-----QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
+.|++.++||+|+||+||+|++... ..||||+++.. .....++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 5688889999999999999987642 47999999754 33445689999999999999999999999999999999
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
|||||.+|++..++.... ..+.+..+..++ .||+.+.++.+||+|||+|+.+....
T Consensus 87 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 164 (283)
T d1mqba_ 87 ITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 164 (283)
T ss_dssp EEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEEecccCcchhhhhccc--ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCC
Confidence 999999999988775432 224444444433 34455889999999999999875443
Q ss_pred cc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.. .......||+.|||||++.++.++.|+|||||||++|||++|+.|+...... ..+... ...+ .
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-~~~~~~----i~~~---------~ 230 (283)
T d1mqba_ 165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKA----INDG---------F 230 (283)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHH----HHTT---------C
T ss_pred ccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-HHHHHH----Hhcc---------C
Confidence 22 2233457899999999999999999999999999999999977665332211 111111 1111 1
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+.....++.+++.+||+.||++||||.||+++|+..
T Consensus 231 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l 270 (283)
T d1mqba_ 231 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 270 (283)
T ss_dssp CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHH
Confidence 1122233456788999999999999999999999999875
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-40 Score=346.18 Aligned_cols=226 Identities=25% Similarity=0.309 Sum_probs=168.2
Q ss_pred eeeccccceeEEeeeecC---CcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcccC
Q 003402 531 SKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVN 605 (823)
Q Consensus 531 ~~LG~G~fG~Vy~g~~~~---~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~~~ 605 (823)
++||+|+||+||+|.+.+ ++.||||+++.. +....++|.+|++++++++|||||+++|+|.+ +..+|||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 479999999999998754 468999999653 23345789999999999999999999999864 567899999999
Q ss_pred CCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccc-cccc
Q 003402 606 KSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQ-GNTK 662 (823)
Q Consensus 606 gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~-~~~~ 662 (823)
|+|.+++.... .+.+..+..++ .||+.+.++.+||+|||+|+.+...... ....
T Consensus 92 g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHhhcc---CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 99999986432 24444444433 3444478899999999999987554322 2334
Q ss_pred cccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...||++|||||.+.+..++.|+|||||||++|||+| |+.|+..... ..+... ...+.. ...+.
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~--~~~~~~----i~~~~~---------~~~p~ 233 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAM----LEKGER---------MGCPA 233 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH----HHTTCC---------CCCCT
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH--HHHHHH----HHcCCC---------CCCCc
Confidence 4679999999999999999999999999999999998 8888753321 111111 111111 11222
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
..+.++.+++.+||+.||++||||++|+++|+..
T Consensus 234 ~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 234 GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 3446788999999999999999999999988764
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-39 Score=348.35 Aligned_cols=238 Identities=26% Similarity=0.416 Sum_probs=178.9
Q ss_pred HhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQG 594 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~ 594 (823)
..++|++.++||+|+||+||+|++.. ...||||.+... .....+.|.+|+.++.++ +|||||++++++.+.+
T Consensus 35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 114 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114 (325)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence 34689999999999999999998653 236999998654 333456799999999998 8999999999999999
Q ss_pred eEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHH----------------------Hhc
Q 003402 595 EKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRI----------------------IDG 632 (823)
Q Consensus 595 ~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i----------------------~~~ 632 (823)
..+||||||++|+|.++|...... ..+.+..+..+ +.|
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N 194 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 194 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence 999999999999999999653211 22444443333 344
Q ss_pred cccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCc
Q 003402 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDS 711 (823)
Q Consensus 633 ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~ 711 (823)
|+.+.++.+||+|||+|+............+..||+.|||||++.++.|+.++|||||||+||||+| |+.||.....+.
T Consensus 195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~ 274 (325)
T d1rjba_ 195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274 (325)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence 5557899999999999998755443333445779999999999999999999999999999999998 888875433221
Q ss_pred cchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 712 FNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 712 ~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
.+. .....+ .....+......+.+++..||+.||++||||+||+++|.-
T Consensus 275 -~~~----~~~~~~---------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 323 (325)
T d1rjba_ 275 -NFY----KLIQNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323 (325)
T ss_dssp -HHH----HHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHH----HHHhcC---------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence 111 111111 1111223345678899999999999999999999999853
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.8e-39 Score=346.70 Aligned_cols=243 Identities=23% Similarity=0.354 Sum_probs=184.2
Q ss_pred HHHHHHhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEE
Q 003402 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590 (823)
Q Consensus 518 ~~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~ 590 (823)
.+++.+.++|++.++||+|+||+||+|++. +++.||||+++... .+..++|.+|++++++++||||++++++|
T Consensus 6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~ 85 (301)
T d1lufa_ 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 85 (301)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence 344556788999999999999999999864 35789999997643 33457899999999999999999999999
Q ss_pred EeCCeEEEEEEcccCCCchhhccCCCc---------------------ccccCHHHHHHHHh------------------
Q 003402 591 IEQGEKILIYEYMVNKSLDVFLFDPTK---------------------KHLLGWQLRVRIID------------------ 631 (823)
Q Consensus 591 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~r~~i~~------------------ 631 (823)
.+.+..++||||+++|+|.++|..... ...+.+..+..++.
T Consensus 86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD 165 (301)
T d1lufa_ 86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 165 (301)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence 999999999999999999999853221 12245555554443
Q ss_pred ----ccccccCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCC-CCCC
Q 003402 632 ----GIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKK-NTGV 706 (823)
Q Consensus 632 ----~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~-p~~~ 706 (823)
||+.|.++.+||+|||+|+.+.............||+.|||||.+.+..|+.|+|||||||++|||++|.. |+..
T Consensus 166 lKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~ 245 (301)
T d1lufa_ 166 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 245 (301)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred EcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence 34447889999999999997755544444556789999999999999999999999999999999999975 4432
Q ss_pred CCCCccchhHHHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 707 YNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 707 ~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.. ...+... . ..+... ..+...+.++.+++..||+.||++||||.||+++|+..
T Consensus 246 ~~--~~e~~~~---v-~~~~~~---------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i 299 (301)
T d1lufa_ 246 MA--HEEVIYY---V-RDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 299 (301)
T ss_dssp SC--HHHHHHH---H-HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred CC--HHHHHHH---H-HcCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 21 1111111 1 111111 11223345788999999999999999999999999876
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-39 Score=340.16 Aligned_cols=226 Identities=23% Similarity=0.269 Sum_probs=174.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||+||+|+.. +++.||||.+.+. .....+++.+|++++++++|||||++++++.+.+..++||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999875 5889999998643 2234578999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|.+++...... |..++.||+.++.||+.+.++.+||+|||+|+...... .
T Consensus 86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~----~ 161 (263)
T d2j4za1 86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 161 (263)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC----C
T ss_pred eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCc----c
Confidence 999999999988542211 11222233334455666889999999999998765432 2
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||++.+..|+.++|||||||+||||++|+.||..... ..+... .. ... ...+.
T Consensus 162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~---i~-~~~----------~~~p~ 225 (263)
T d2j4za1 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--QETYKR---IS-RVE----------FTFPD 225 (263)
T ss_dssp EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHH---HH-TTC----------CCCCT
T ss_pred cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH--HHHHHH---HH-cCC----------CCCCc
Confidence 346899999999999999999999999999999999999999853221 111111 11 110 01122
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
.....+.+++..||+.||++|||+.|+++
T Consensus 226 ~~s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 226 FVTEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 23456788999999999999999999986
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-39 Score=342.91 Aligned_cols=229 Identities=23% Similarity=0.330 Sum_probs=168.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--QGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--~~~~~lV 599 (823)
++|++.+.||+|+||+||+|+.. +|+.||||.+... .....+.|.+|++++++++|||||++++++.+ .+..++|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 67999999999999999999875 5899999999754 33445679999999999999999999999975 4568999
Q ss_pred EEcccCCCchhhccCCC-----cc------------------cc-----cCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 600 YEYMVNKSLDVFLFDPT-----KK------------------HL-----LGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~-----~~------------------~~-----l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
|||+++|+|.+++.... .. |. ....||+.++.||..+.++.+||+|||+|+.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 99999999999874210 00 11 1256777788889999999999999999998
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
+..+.. ......||+.|||||++.+..|+.|+|||||||++|||+||+.||..... ..+.... ..+...
T Consensus 164 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~--~~~~~~i----~~~~~~--- 232 (269)
T d2java1 164 LNHDTS--FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKI----REGKFR--- 232 (269)
T ss_dssp C-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH----HHTCCC---
T ss_pred cccCCC--ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH--HHHHHHH----HcCCCC---
Confidence 754322 23457899999999999999999999999999999999999999853321 1111111 111111
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+.....++.+++.+||+.||++|||+.|+++
T Consensus 233 ------~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 233 ------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 112223456888999999999999999999876
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=338.80 Aligned_cols=232 Identities=21% Similarity=0.333 Sum_probs=178.2
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
++|++.++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+.++++++|||||++++++.+.+..+|||||+
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 99 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence 56999999999999999999864 58999999997655556678999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccccc
Q 003402 604 VNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~~~ 665 (823)
++|+|.+++...... |..+..||+.++.||+.+.++++||+|||+|+.+..+.. .....+
T Consensus 100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~--~~~~~~ 177 (293)
T d1yhwa1 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMV 177 (293)
T ss_dssp TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--CBCCCC
T ss_pred CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccc--cccccc
Confidence 999999887543211 112222333344566668899999999999998754432 233468
Q ss_pred ccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCHHHHH
Q 003402 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLV 745 (823)
Q Consensus 666 Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~~~~~ 745 (823)
||+.|||||++.+..|+.++|||||||++|||++|+.||..... ... ......... ..+ ..+.....
T Consensus 178 gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~---~~~~~~~~~-~~~-------~~~~~~s~ 244 (293)
T d1yhwa1 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--LRA---LYLIATNGT-PEL-------QNPEKLSA 244 (293)
T ss_dssp SCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHH---HHHHHHHCS-CCC-------SSGGGSCH
T ss_pred cCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH--HHH---HHHHHhCCC-CCC-------CCcccCCH
Confidence 99999999999999999999999999999999999999853221 111 111111110 011 11222345
Q ss_pred HHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 746 RYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 746 ~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~li~~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 245 IFRDFLNRCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 68889999999999999999998763
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-39 Score=344.00 Aligned_cols=232 Identities=21% Similarity=0.339 Sum_probs=175.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+.|++.++||+|+||+||+|+.. +++.||||+++.......+.|.+|++++++++|||||++++++.+.+..+||||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~ 91 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence 56899999999999999999875 58899999998766667788999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 604 VNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
++|+|..++...... |..++.||+.++.||+.+.++++||+|||+|+...... .....
T Consensus 92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~--~~~~~ 169 (288)
T d2jfla1 92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRDS 169 (288)
T ss_dssp TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH--HHHTC
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCc--ccccc
Confidence 999999987532211 11122233334456666889999999999998753321 12334
Q ss_pred cccccccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 664 IVGTYGYMSPEYAL-----EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~-----~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
..||+.|||||++. +..|+.|+|||||||++|||+||+.||...... ..+.. ..... ...+ .
T Consensus 170 ~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~--~~~~~---i~~~~-~~~~-------~ 236 (288)
T d2jfla1 170 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM--RVLLK---IAKSE-PPTL-------A 236 (288)
T ss_dssp CCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG--GHHHH---HHHSC-CCCC-------S
T ss_pred cccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH--HHHHH---HHcCC-CCCC-------C
Confidence 68999999999984 456899999999999999999999998543221 11111 11111 0011 1
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++..||+.||++|||+.|++++
T Consensus 237 ~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 237 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112334568889999999999999999998763
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-39 Score=343.08 Aligned_cols=230 Identities=20% Similarity=0.278 Sum_probs=173.1
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.+.||+|+||+||+|+.. +++.||||++++. .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 67999999999999999999875 5899999999643 2334578999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+++|+|.+++...... |..++.||+.++.||..++++.+||+|||+|+.+.........
T Consensus 88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~ 167 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167 (288)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCccccc
Confidence 999999999887542211 1122233334455666788999999999999988655444444
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...+||+.|||||++.+..|+.++|||||||+||||++|+.||.... ...+.. ... .... ..+.
T Consensus 168 ~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~~~~~~---~i~-~~~~----------~~p~ 231 (288)
T d1uu3a_ 168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EYLIFQ---KII-KLEY----------DFPE 231 (288)
T ss_dssp --CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHH---HHH-TTCC----------CCCT
T ss_pred ccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC--HHHHHH---HHH-cCCC----------CCCc
Confidence 55789999999999999999999999999999999999999985322 111111 111 1100 1122
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
....++.+++..||+.||++|||++|++.
T Consensus 232 ~~s~~~~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 232 KFFPKARDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp TCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence 23456788999999999999999999754
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-38 Score=332.98 Aligned_cols=227 Identities=23% Similarity=0.335 Sum_probs=166.8
Q ss_pred cceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCeEEEE
Q 003402 527 FSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE----QGEKILI 599 (823)
Q Consensus 527 f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~----~~~~~lV 599 (823)
|++.++||+|+||+||+|+.. +++.||||.+... .....+.|.+|++++++++|||||++++++.+ ....++|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 366689999999999999875 4789999998754 33445689999999999999999999999876 3568999
Q ss_pred EEcccCCCchhhccCCCcc-------------------cccC--HHHHHHHHhccccc-cCCCceeceeeceeecCCCcc
Q 003402 600 YEYMVNKSLDVFLFDPTKK-------------------HLLG--WQLRVRIIDGIAQD-QHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~-------------------~~l~--~~~r~~i~~~ia~d-~~~~~KI~DFGla~~~~~~~~ 657 (823)
|||+++|+|.+++...... |... ..||+.++.||+.+ +++.+||+|||+|+.....
T Consensus 91 mE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~-- 168 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-- 168 (270)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--
T ss_pred EeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC--
Confidence 9999999999988542211 1112 34444455566654 5789999999999865332
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.....+||+.|||||++.+ .++.++|||||||++|||++|+.||...... ..+... ...+.. .+..
T Consensus 169 --~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~-~~~~~~----i~~~~~----~~~~-- 234 (270)
T d1t4ha_ 169 --FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRR----VTSGVK----PASF-- 234 (270)
T ss_dssp --SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHH----HTTTCC----CGGG--
T ss_pred --ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccH-HHHHHH----HHcCCC----Cccc--
Confidence 2335789999999998865 6999999999999999999999998533211 111111 111111 0111
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
+.....++.+++.+||+.||++|||+.|++++
T Consensus 235 --~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 235 --DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp --GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --CccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence 11123457789999999999999999999763
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-38 Score=344.82 Aligned_cols=244 Identities=21% Similarity=0.255 Sum_probs=176.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.++|++.++||+|+||+||+|+.. +++.||||+++.. .....+++.+|+.+|++++|||||+++++|.+.++.+||||
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE 84 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 84 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 478999999999999999999875 5899999999754 33445789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cc-cCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HL-LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~-l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||++|+|.+++...... |. .++.||+.++.||+.+.++.+||+|||+|+.+... ..
T Consensus 85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~----~~ 160 (322)
T d1s9ja_ 85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MA 160 (322)
T ss_dssp CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----TC
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCC----cc
Confidence 99999999998542211 11 12334455556777789999999999999876322 23
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC-----------------
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN----------------- 724 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~----------------- 724 (823)
.+.+||+.|||||++.+..|+.++||||+||++|||++|+.||....................
T Consensus 161 ~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (322)
T d1s9ja_ 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240 (322)
T ss_dssp ---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------------
T ss_pred ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccc
Confidence 357899999999999999999999999999999999999999865433211110000000000
Q ss_pred -------CccccccCccccc----CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 -------DRAHELMDPVLQN----EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 -------~~~~~l~d~~l~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....+..+..... ........++.+++..||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp -----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0000000000000 0001123568889999999999999999999873
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-38 Score=331.07 Aligned_cols=228 Identities=25% Similarity=0.380 Sum_probs=169.1
Q ss_pred hcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-CeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-GEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-~~~~lV~Ey 602 (823)
.++|++.++||+|+||.||+|++ .++.||||+++.. ...++|.+|++++++++|||||+++|+|.+. +..++||||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 36788999999999999999998 5788999999754 3457899999999999999999999999764 568999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHHHHHhcccc----------------------ccCCCceeceeeceeecCCCccccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~~i~~~ia~----------------------d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
+++|+|.++|.... ...+.|..+..++.+|+. +.++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~----- 156 (262)
T d1byga_ 83 MAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----- 156 (262)
T ss_dssp CTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCC-----
Confidence 99999999996432 123567666666655442 77889999999999875432
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....+|+.|||||++.++.++.++|||||||++|||+| |+.|+.... ...+.... ..+. ..+.
T Consensus 157 ~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~--~~~~~~~i----~~~~---------~~~~ 221 (262)
T d1byga_ 157 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRV----EKGY---------KMDA 221 (262)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHH----TTTC---------CCCC
T ss_pred CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCC--HHHHHHHH----HcCC---------CCCC
Confidence 233578999999999999999999999999999999999 566553322 11222211 1111 1122
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
+.....++.+++.+||+.||++||||.+|+++|+..
T Consensus 222 ~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i 257 (262)
T d1byga_ 222 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 257 (262)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 233345788999999999999999999999999764
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-38 Score=341.71 Aligned_cols=233 Identities=23% Similarity=0.365 Sum_probs=170.5
Q ss_pred cCcceeeeeccccceeEEeeeecC-Cc----EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
++|++.++||+|+||+||+|++.. |+ .||||+++.. +.+..++|.+|+.++++++|||||+++|+|.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 469999999999999999998743 43 6999998753 345678899999999999999999999999875 5678
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
++||+.+|+|.+++.... ..+++..+..++ .||+.+.++.+||+|||+|+.+....
T Consensus 88 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 899999999988875432 224444433333 34445788999999999999876655
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
.........||+.|||||++.++.|+.|+|||||||+||||+| |+.|+...... .+..... .+ .
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~--~~~~~i~----~~---------~ 230 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE----KG---------E 230 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG--GHHHHHH----HT---------C
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH--HHHHHHH----cC---------C
Confidence 4444555679999999999999999999999999999999999 67776433221 1111111 11 0
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
....+......+.+++.+||+.||++||||.||++.|+..
T Consensus 231 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~ 270 (317)
T d1xkka_ 231 RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270 (317)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence 1112223446788899999999999999999999988764
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.4e-38 Score=337.66 Aligned_cols=230 Identities=19% Similarity=0.206 Sum_probs=157.5
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~-~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
.+.|++.++||+|+||+||+|+.. +++.||||.+..... ...+.+.+|+.++++++|||||++++++.+++..+||||
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 356999999999999999999875 589999999975432 234578899999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcccccCHHHH----------------------HHHHhcccc---ccCCCceeceeeceeecCCCc
Q 003402 602 YMVNKSLDVFLFDPTKKHLLGWQLR----------------------VRIIDGIAQ---DQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~~~l~~~~r----------------------~~i~~~ia~---d~~~~~KI~DFGla~~~~~~~ 656 (823)
||++|+|.++|..... +..... +.++.||.. ++++.+||+|||+|+......
T Consensus 88 ~~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~ 164 (307)
T d1a06a_ 88 LVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 164 (307)
T ss_dssp CCCSCBHHHHHHTCSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred ccCCCcHHHhhhcccC---CCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence 9999999999865322 232222 222233333 457889999999999765432
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
.....+||+.|||||++.+..|+.++|||||||+||||++|+.||..... ..+.. ...... . ...
T Consensus 165 ---~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~~---~i~~~~-~------~~~ 229 (307)
T d1a06a_ 165 ---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFE---QILKAE-Y------EFD 229 (307)
T ss_dssp -----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHH---HHHTTC-C------CCC
T ss_pred ---eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH--HHHHH---HHhccC-C------CCC
Confidence 23346899999999999999999999999999999999999999853221 11111 111110 0 001
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..........+.+++..||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 230 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 11112334568899999999999999999999874
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-38 Score=336.12 Aligned_cols=231 Identities=27% Similarity=0.396 Sum_probs=172.8
Q ss_pred eeeeccccceeEEeeeecCC----cEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-CeEEEEEEcc
Q 003402 530 QSKLGEGGFGPVYKGRLLNG----QEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-GEKILIYEYM 603 (823)
Q Consensus 530 ~~~LG~G~fG~Vy~g~~~~~----~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-~~~~lV~Ey~ 603 (823)
.++||+|+||+||+|++.+. ..||||+++.. .....++|.+|++++++++|||||+++|+|.+. +..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 47899999999999987542 36999999753 445568899999999999999999999999874 6899999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCccc--c
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDELQ--G 659 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~~~--~ 659 (823)
++|+|.+++...... ..+..+.+++ .||+.++++.+||+|||+++.+...... .
T Consensus 112 ~~g~l~~~~~~~~~~--~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~ 189 (311)
T d1r0pa_ 112 KHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 189 (311)
T ss_dssp TTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTT
T ss_pred ecCchhhhhcccccc--chHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccce
Confidence 999999988754332 2333333333 3444588999999999999987544322 2
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
......||+.|||||.+..+.++.|+|||||||++|||+||+.|+...... ..+..... .+.. . ..
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~-~~~~~~i~----~g~~--~-------~~ 255 (311)
T d1r0pa_ 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLL----QGRR--L-------LQ 255 (311)
T ss_dssp CTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHH----TTCC--C-------CC
T ss_pred ecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH-HHHHHHHH----cCCC--C-------CC
Confidence 233467999999999999999999999999999999999988886432211 11111111 1110 0 11
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
+......+.+++..||+.||++||+|.||+++|++..
T Consensus 256 p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~ 292 (311)
T d1r0pa_ 256 PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 292 (311)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 1223456888999999999999999999999998874
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-37 Score=334.33 Aligned_cols=238 Identities=25% Similarity=0.356 Sum_probs=181.5
Q ss_pred HhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGE 595 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~ 595 (823)
..++|++.++||+|+||+||+|++. +++.||||+++.. ..+....|.+|+.++++++|||||+++|+|...+.
T Consensus 18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~ 97 (308)
T d1p4oa_ 18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 97 (308)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence 3478899999999999999999863 2578999999754 33445679999999999999999999999999999
Q ss_pred EEEEEEcccCCCchhhccCCC-------cccccCHHHHHHHHh----------------------ccccccCCCceecee
Q 003402 596 KILIYEYMVNKSLDVFLFDPT-------KKHLLGWQLRVRIID----------------------GIAQDQHMNPKISDF 646 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~-------~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DF 646 (823)
.++|||||++|+|.+++.... ....+.+..+..++. ||+.|.++++||+||
T Consensus 98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DF 177 (308)
T d1p4oa_ 98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 177 (308)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCT
T ss_pred eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeec
Confidence 999999999999999885321 112234444444433 344488999999999
Q ss_pred eceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCC-CCCCCCCCccchhHHHHhhccCC
Q 003402 647 GMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKK-NTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~-p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
|+|+.+.............||+.|||||.+.+..++.++|||||||++|||+||+. |+.... ...... ... .+
T Consensus 178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~--~~~~~~---~i~-~~ 251 (308)
T d1p4oa_ 178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--NEQVLR---FVM-EG 251 (308)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--HHHHHH---HHH-TT
T ss_pred ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC--HHHHHH---HHH-hC
Confidence 99998765554444555689999999999999999999999999999999999864 443211 111111 111 11
Q ss_pred ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 726 ~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
... ..+......+.+++.+||+.||++||||.+|+++|+..
T Consensus 252 ~~~---------~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~ 292 (308)
T d1p4oa_ 252 GLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 292 (308)
T ss_dssp CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred CCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 111 11223345788999999999999999999999999886
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.1e-38 Score=338.06 Aligned_cols=227 Identities=26% Similarity=0.395 Sum_probs=170.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
+.|++.++||+|+||+||+|+.. +++.||||+++... ....+.|.+|+.++++++|||||++++++.+++..+|||
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~ 94 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence 45899999999999999999864 58899999997543 334567999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|||++|+|+.++...... |..+..||+.++.||+.+.++.+||+|||+|+.... .
T Consensus 95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~------~ 168 (309)
T d1u5ra_ 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------A 168 (309)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS------B
T ss_pred EecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC------C
Confidence 999999998766432210 112222333344566668899999999999986533 2
Q ss_pred ccccccccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 662 KRIVGTYGYMSPEYALE---GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~---~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
....||+.|||||++.+ +.|+.|+|||||||++|||++|+.|+..... .. ......... ...+
T Consensus 169 ~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~--~~---~~~~i~~~~-~~~~-------- 234 (309)
T d1u5ra_ 169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MS---ALYHIAQNE-SPAL-------- 234 (309)
T ss_dssp CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HH---HHHHHHHSC-CCCC--------
T ss_pred CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH--HH---HHHHHHhCC-CCCC--------
Confidence 34689999999999863 5689999999999999999999999853211 11 111111111 1111
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+......+.+++..||+.||++|||+.|++++
T Consensus 235 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence 111234568889999999999999999999763
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-37 Score=333.69 Aligned_cols=235 Identities=26% Similarity=0.376 Sum_probs=174.7
Q ss_pred cCcceeeeeccccceeEEeeeecC-Cc--EEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQ--EVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~--~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.++||+|+||+||+|++.+ +. .||||+++.. .....++|.+|++++.++ +|||||+++|+|.+.+..++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 678999999999999999998764 33 5889988643 334556899999999999 799999999999999999999
Q ss_pred EEcccCCCchhhccCCC-------------cccccCHHHHHHHHhcc----------------------ccccCCCceec
Q 003402 600 YEYMVNKSLDVFLFDPT-------------KKHLLGWQLRVRIIDGI----------------------AQDQHMNPKIS 644 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~r~~i~~~i----------------------a~d~~~~~KI~ 644 (823)
|||+++|+|.++|+... ....+.+..+..++.+| +.+.++.+||+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~ 169 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 169 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEc
Confidence 99999999999996542 22345666555544433 33778899999
Q ss_pred eeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCCCccchhHHHHhhcc
Q 003402 645 DFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN-TGVYNTDSFNLLGHAWSLCK 723 (823)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p-~~~~~~~~~~l~~~~~~~~~ 723 (823)
|||+|+..... .......||+.|||||.+.++.++.++|||||||++|||++|..| +... ....+... . .
T Consensus 170 DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~--~~~~~~~~---i-~ 240 (309)
T d1fvra_ 170 DFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYEK---L-P 240 (309)
T ss_dssp CTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHH---G-G
T ss_pred ccccccccccc---ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC--CHHHHHHH---H-H
Confidence 99999865322 222345799999999999999999999999999999999998765 4221 11111111 1 1
Q ss_pred CCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcccC
Q 003402 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELF 777 (823)
Q Consensus 724 ~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 777 (823)
.+. ..+.+.....++.+++.+||+.||++||||.||++.|+....
T Consensus 241 ~~~---------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 285 (309)
T d1fvra_ 241 QGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285 (309)
T ss_dssp GTC---------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcC---------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 110 111223345678899999999999999999999999988643
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.4e-37 Score=339.48 Aligned_cols=230 Identities=22% Similarity=0.261 Sum_probs=176.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
++|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|+.++++++|||||++++++.+.+..+||||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 57999999999999999999875 58999999998766666778999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcccccCHHHHHH----------------------HHhcccc--ccCCCceeceeeceeecCCCcccc
Q 003402 604 VNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQ--DQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~--d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
++|+|.+++..... .+....... ++.||+. +.++.+||+|||+|+.+.....
T Consensus 106 ~gg~L~~~l~~~~~--~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~-- 181 (350)
T d1koaa2 106 SGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-- 181 (350)
T ss_dssp CSCBHHHHHTCTTS--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC--
T ss_pred CCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccc--
Confidence 99999999854322 233333222 2344444 3467899999999998754432
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCC
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~ 739 (823)
.....||+.|||||++.+..|+.++|||||||++|||++|+.||.... ....+.... ... . . .+. ..
T Consensus 182 -~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--~~~~~~~i~---~~~-~-~-~~~----~~ 248 (350)
T d1koaa2 182 -VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--DDETLRNVK---SCD-W-N-MDD----SA 248 (350)
T ss_dssp -EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HTC-C-C-SCC----GG
T ss_pred -cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC--HHHHHHHHH---hCC-C-C-CCc----cc
Confidence 334689999999999999999999999999999999999999985322 111111111 100 0 0 000 01
Q ss_pred CHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 740 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.......+.+++..||+.||++|||+.|++++
T Consensus 249 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 249 FSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11234567889999999999999999999885
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-38 Score=331.22 Aligned_cols=233 Identities=21% Similarity=0.301 Sum_probs=164.7
Q ss_pred hcCcceeeeeccccceeEEeeeecC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEE
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKIL 598 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~l 598 (823)
.++|++.++||+|+||.||+|++.. +..||||.++... ....+.|.+|+.++++++|||||+++|++. .+..++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i 84 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 84 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence 4679999999999999999998743 3579999997543 344567999999999999999999999985 567899
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHHH----------------------hccccccCCCceeceeeceeecCCCc
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------------------DGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~----------------------~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
||||+++|+|..++.... ..+++..+..++ .||..+.++.+||+|||+|+.+....
T Consensus 85 v~E~~~~g~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 85 IMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp EEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEeccCCcHHhhhhccC--CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence 999999999998875432 223444433333 34444788899999999999765433
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l 735 (823)
. .......||+.|||||++.+..++.++|||||||++|||+| |++|+...... .+.... ..+..
T Consensus 163 ~-~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~--~~~~~i----~~~~~-------- 227 (273)
T d1mp8a_ 163 Y-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI----ENGER-------- 227 (273)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH----HTTCC--------
T ss_pred c-eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH--HHHHHH----HcCCC--------
Confidence 2 22344678999999999999999999999999999999998 77777543221 221111 11111
Q ss_pred ccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 736 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
...+......+.+++..||+.||++||||.||++.|+..
T Consensus 228 -~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i 266 (273)
T d1mp8a_ 228 -LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266 (273)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 112233446788999999999999999999999998764
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-37 Score=332.82 Aligned_cols=242 Identities=23% Similarity=0.324 Sum_probs=182.7
Q ss_pred HHhcCcceeeeeccccceeEEeeeec------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ 593 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~ 593 (823)
...++|++.++||+|+||.||+|++. +++.||||+++... .....+|.+|+.+++++ +|||||+++|+|.+.
T Consensus 20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~ 99 (311)
T d1t46a_ 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (311)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence 34578999999999999999999752 35789999997643 34456799999999999 799999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCCc---------------ccccCHHHHHHHH----------------------hccccc
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTK---------------KHLLGWQLRVRII----------------------DGIAQD 636 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~---------------~~~l~~~~r~~i~----------------------~~ia~d 636 (823)
+..+||||||++|+|..+++.... ...+.+..+..++ .||+.+
T Consensus 100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~ 179 (311)
T d1t46a_ 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179 (311)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccc
Confidence 999999999999999999864321 1234444444333 334447
Q ss_pred cCCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhH
Q 003402 637 QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 637 ~~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~ 716 (823)
.++.+||+|||+++...............||+.|||||.+.++.++.++|||||||++|||+|++.|+.........+..
T Consensus 180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~ 259 (311)
T d1t46a_ 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 259 (311)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH
T ss_pred ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 88899999999999876554444455678999999999999999999999999999999999966554322222111111
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
.. ..+ .....+......+.+++.+||+.||++||||.||+++|++.+
T Consensus 260 ~i----~~~---------~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i 306 (311)
T d1t46a_ 260 MI----KEG---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (311)
T ss_dssp HH----HHT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH----hcC---------CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence 11 111 111122233467889999999999999999999999998753
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=1.7e-37 Score=339.19 Aligned_cols=232 Identities=21% Similarity=0.238 Sum_probs=176.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEcc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYM 603 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey~ 603 (823)
+.|++.++||+|+||+||+|+.. +++.||||+++.......+.+.+|++++++++|||||++++++.+++..+||||||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 108 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 108 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 57999999999999999999874 58999999998765556678999999999999999999999999999999999999
Q ss_pred cCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccc--cCCCceeceeeceeecCCCcccccc
Q 003402 604 VNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQD--QHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 604 ~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d--~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
++|+|.+++...... |..++.||+.++.||+.+ .++.+||+|||+|+.+..+.. .
T Consensus 109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~---~ 185 (352)
T d1koba_ 109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---V 185 (352)
T ss_dssp CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC---E
T ss_pred CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCc---e
Confidence 999998877543221 111112222333455544 578899999999998765432 3
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||++.+..|+.++|||||||+||||+||+.||..... ...+.... ... . ........
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~~~~i~---~~~-~------~~~~~~~~ 253 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVK---RCD-W------EFDEDAFS 253 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHH---HCC-C------CCCSSTTT
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH---hCC-C------CCCccccc
Confidence 346899999999999999999999999999999999999999853221 11111111 100 0 00111112
Q ss_pred HHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.....+.+++..||+.||++|||+.|++++
T Consensus 254 ~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 254 SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 334567889999999999999999999874
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-37 Score=328.44 Aligned_cols=239 Identities=21% Similarity=0.309 Sum_probs=169.1
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHH--HHHHHHHhcCCCceeeEEeEEEeCC----eEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFK--NEMMLIAKLQHRNLVRLLGCCIEQG----EKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~--~Ev~~l~~l~H~Niv~l~g~~~~~~----~~~l 598 (823)
++|.+.++||+|+||.||+|++ +|+.||||+++... .+++. .|+..+.+++|||||+++|+|.+.+ ..++
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l 78 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence 4678889999999999999997 68899999996532 23343 4555666789999999999998754 6899
Q ss_pred EEEcccCCCchhhccCCCcccccCHHHHHHH------------------------------HhccccccCCCceeceeec
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI------------------------------IDGIAQDQHMNPKISDFGM 648 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i------------------------------~~~ia~d~~~~~KI~DFGl 648 (823)
|||||++|+|..+|.... +.|..+..+ +.||+.+.++.+||+|||+
T Consensus 79 v~Ey~~~g~L~~~l~~~~----l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl 154 (303)
T d1vjya_ 79 VSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEecccCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence 999999999999996432 444443333 3334447889999999999
Q ss_pred eeecCCCcc--ccccccccccccccccccccCCC------CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch------
Q 003402 649 ARMFGGDEL--QGNTKRIVGTYGYMSPEYALEGV------FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL------ 714 (823)
Q Consensus 649 a~~~~~~~~--~~~~~~~~Gt~~YmAPE~~~~~~------~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l------ 714 (823)
++....... ........||++|||||++.+.. ++.|+|||||||+||||+||..|+..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~ 234 (303)
T d1vjya_ 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred cccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccc
Confidence 998754322 22334578999999999987643 6789999999999999999988765432221100
Q ss_pred ---hHHHHhhccCCccccccCcccccC-CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 715 ---LGHAWSLCKNDRAHELMDPVLQNE-VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 715 ---~~~~~~~~~~~~~~~l~d~~l~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
........ ..+..++.+... ...+....+.+++.+||+.||++||||.||+++|+..
T Consensus 235 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i 295 (303)
T d1vjya_ 235 DPSVEEMRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp SCCHHHHHHHH----TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchHHHHHHHH----hccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 00011111 111112222111 1234556788999999999999999999999999764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-37 Score=327.24 Aligned_cols=240 Identities=25% Similarity=0.364 Sum_probs=170.7
Q ss_pred HHhcCcceeeeeccccceeEEeeeecC------CcEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeC
Q 003402 522 AATENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIEQ 593 (823)
Q Consensus 522 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~VAVK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~~ 593 (823)
...++|++.++||+|+||.||+|++.. ++.||||+++.. .....++|.+|+..+.++ +|+|||++++++.+.
T Consensus 10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence 445789999999999999999998642 468999999754 334456788999888887 789999999998765
Q ss_pred -CeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHHH----------------------Hhcccccc
Q 003402 594 -GEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRI----------------------IDGIAQDQ 637 (823)
Q Consensus 594 -~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i----------------------~~~ia~d~ 637 (823)
...++|||||++|+|.++|..... ...+.+..+..+ +.||+.++
T Consensus 90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~ 169 (299)
T d1ywna1 90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 169 (299)
T ss_dssp TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG
T ss_pred CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECC
Confidence 468999999999999999864321 122444443333 34455588
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCC-CCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKK-NTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~-p~~~~~~~~~~l~~ 716 (823)
++.+||+|||+|+...............||+.|||||.+.+..++.++|||||||++|||+||.. |+...... ..+..
T Consensus 170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~~~~~ 248 (299)
T d1ywna1 170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCR 248 (299)
T ss_dssp GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHHHH
T ss_pred CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-HHHHH
Confidence 99999999999998765544444556789999999999999999999999999999999999765 55322221 11111
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.. ..+.. ...+.....++.+++.+||+.||++||||.||+++|+..
T Consensus 249 ~~----~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i 294 (299)
T d1ywna1 249 RL----KEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294 (299)
T ss_dssp HH----HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HH----hcCCC---------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11 11111 111222345688999999999999999999999999875
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-37 Score=327.77 Aligned_cols=229 Identities=21% Similarity=0.250 Sum_probs=170.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS------GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~------~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
+.|++.++||+|+||+||+|+.. +|+.||||++++.. ....+.|.+|+.++++++|||||++++++.+.+..+
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 67999999999999999999874 58999999986432 223678999999999999999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCC----Cceeceeeceee
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHM----NPKISDFGMARM 651 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~----~~KI~DFGla~~ 651 (823)
||||||++|+|.++|.... .+....... .+.||..+.++ .+||+|||+|+.
T Consensus 90 iv~E~~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~ 166 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166 (293)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEcCCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhh
Confidence 9999999999999985432 233332222 22333334443 589999999998
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCcccccc
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 731 (823)
+.... ......||+.|||||++.+..++.++|||||||++|||++|+.||..... ...... .. .... . .
T Consensus 167 ~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~~~---i~-~~~~-~-~ 235 (293)
T d1jksa_ 167 IDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLAN---VS-AVNY-E-F 235 (293)
T ss_dssp CTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH---HH-TTCC-C-C
T ss_pred cCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH--HHHHHH---HH-hcCC-C-C
Confidence 75432 22346799999999999999999999999999999999999999853221 111111 10 1000 0 0
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.+. ........+.+++..||+.||++|||+.|+++.
T Consensus 236 ~~~----~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 236 EDE----YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp CHH----HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred Cch----hcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 011224567889999999999999999999873
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-37 Score=324.25 Aligned_cols=233 Identities=24% Similarity=0.297 Sum_probs=165.2
Q ss_pred cCcceeeeeccccceeEEeeeecC--C--cEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLN--G--QEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~--~--~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
++|++.+.||+|+||.||+|++.. + ..||||+++.. ..+..++|.+|+.++++++|||||+++|+|.+ +..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 679999999999999999998643 2 37999998753 33456789999999999999999999999965 4678
Q ss_pred EEEEcccCCCchhhccCCCcccccCHHHHHHHHh----------------------ccccccCCCceeceeeceeecCCC
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID----------------------GIAQDQHMNPKISDFGMARMFGGD 655 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~i~~----------------------~ia~d~~~~~KI~DFGla~~~~~~ 655 (823)
+||||+++|+|.+++.... ..+.+..+..++. ||..+.++.+||+|||+++.+...
T Consensus 87 lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~ 164 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164 (273)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeeeeecCcchhhhhhccc--CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccC
Confidence 9999999999998875422 2244554444433 333478889999999999987554
Q ss_pred ccc-cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 656 ELQ-GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 656 ~~~-~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
... .......||..|||||.+.+..++.++|||||||++|||+| |+.|+..... ... .....+.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~--~~~---~~~i~~~~~~~----- 234 (273)
T d1u46a_ 165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--SQI---LHKIDKEGERL----- 234 (273)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHH---HHHHHTSCCCC-----
T ss_pred CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH--HHH---HHHHHhCCCCC-----
Confidence 332 23334578899999999999999999999999999999998 7888743221 111 11222221111
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhc
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~ 774 (823)
+.+...+..+.+++.+||+.||++||||.||+++|++
T Consensus 235 ----~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~ 271 (273)
T d1u46a_ 235 ----PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271 (273)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1122234568899999999999999999999999875
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-36 Score=326.21 Aligned_cols=238 Identities=24% Similarity=0.362 Sum_probs=177.9
Q ss_pred HhcCcceeeeeccccceeEEeeeecC--------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 003402 523 ATENFSIQSKLGEGGFGPVYKGRLLN--------GQEVAVKRLSNQS-GQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE 592 (823)
Q Consensus 523 ~~~~f~~~~~LG~G~fG~Vy~g~~~~--------~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~ 592 (823)
..++|++.++||+|+||.||+|+... +..||||+++... .....++.+|+..+.++ +|||||+++++|.+
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 34679999999999999999998632 2479999997643 34557899999999998 89999999999999
Q ss_pred CCeEEEEEEcccCCCchhhccCCCc-------------ccccCHHHHHHHH----------------------hcccccc
Q 003402 593 QGEKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVRII----------------------DGIAQDQ 637 (823)
Q Consensus 593 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~r~~i~----------------------~~ia~d~ 637 (823)
++..++||||+++|+|.++|..... ...+.+..+..++ .||+.+.
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~ 170 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 170 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecC
Confidence 9999999999999999999964421 1234454444433 3444578
Q ss_pred CCCceeceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCccchhH
Q 003402 638 HMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-SKKNTGVYNTDSFNLLG 716 (823)
Q Consensus 638 ~~~~KI~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Ellt-g~~p~~~~~~~~~~l~~ 716 (823)
++.+||+|||+++...............||+.|||||.+.++.|+.|+|||||||++|||++ |++|+..... ..
T Consensus 171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~--~~--- 245 (299)
T d1fgka_ 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EE--- 245 (299)
T ss_dssp TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HH---
T ss_pred CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH--HH---
Confidence 89999999999998866555555566789999999999999999999999999999999998 5666542221 11
Q ss_pred HHHhhccCCccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 717 ~~~~~~~~~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.......+... ..+.....++.+++.+||+.||++||||.||+++|++.
T Consensus 246 -~~~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i 294 (299)
T d1fgka_ 246 -LFKLLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294 (299)
T ss_dssp -HHHHHHTTCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHHHcCCCC---------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 11222221111 11223345688999999999999999999999999875
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1e-36 Score=328.29 Aligned_cols=226 Identities=22% Similarity=0.292 Sum_probs=175.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||+||+|+.. +|+.||||++++. .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 57999999999999999999875 5899999999643 2334678999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|||++|+|..++...... |..++.||+.++.||+.+.++.+||+|||+|+.+... .
T Consensus 84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~-----~ 158 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----T 158 (316)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----B
T ss_pred eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc-----c
Confidence 999999998887543221 2223334444456677789999999999999986432 2
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...+||+.|||||++.+..|+.++|||||||+||||++|+.||..... ..+. ....... ...+.
T Consensus 159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~---~~i~~~~-----------~~~p~ 222 (316)
T d1fota_ 159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTY---EKILNAE-----------LRFPP 222 (316)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHH---HHHHHCC-----------CCCCT
T ss_pred ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH--HHHH---HHHHcCC-----------CCCCC
Confidence 347899999999999999999999999999999999999999853221 1111 1111110 01122
Q ss_pred HHHHHHHHHHHHccccCcCCCC-----CHHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRP-----TMSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~ 771 (823)
.....+.+++.+||+.||.+|| |+++++++
T Consensus 223 ~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 223 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence 2345678899999999999996 89999764
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-36 Score=329.92 Aligned_cols=229 Identities=19% Similarity=0.217 Sum_probs=177.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||+||+|+.. +++.||||++++. .....+.+.+|+.+|++++|||||++++++.+.+..++||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ 84 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence 67999999999999999999874 5899999999753 2334678999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|||++|+|..++...... |..++.||+.++.||+.+.++.+||+|||+|+...... ...
T Consensus 85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~--~~~ 162 (337)
T d1o6la_ 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATM 162 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--CCB
T ss_pred eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCC--ccc
Confidence 999999999888543221 22333444555667777999999999999999764432 223
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
...+||+.|||||++.+..|+.++||||+||++|||++|+.|+..... ..+... . ..+. ..++.
T Consensus 163 ~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~--~~~~~~---i-~~~~----------~~~p~ 226 (337)
T d1o6la_ 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFEL---I-LMEE----------IRFPR 226 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH---H-HHCC----------CCCCT
T ss_pred ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH--HHHHHH---H-hcCC----------CCCCc
Confidence 457899999999999999999999999999999999999999854321 111111 1 1110 01222
Q ss_pred HHHHHHHHHHHHccccCcCCCCC-----HHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDRPT-----MSDVVSM 771 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~ 771 (823)
....++.+++..||+.||++||+ +.|++++
T Consensus 227 ~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred cCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence 33456788999999999999995 7777763
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=8.4e-36 Score=315.58 Aligned_cols=239 Identities=23% Similarity=0.283 Sum_probs=168.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC----eE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG----EK 596 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~----~~ 596 (823)
++|++.+.||+|+||+||+|+.. +++.||||.++.. +....+.|.+|++++++++|||||++++++...+ ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 67999999999999999999864 5899999999754 2344567999999999999999999999998754 48
Q ss_pred EEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc-
Q 003402 597 ILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE- 656 (823)
Q Consensus 597 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~- 656 (823)
+|||||+++|+|..++...... |..++.||+.++.||+.+.++..||+|||+++......
T Consensus 87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~ 166 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 166 (277)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----
T ss_pred EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccc
Confidence 8999999999999887543211 11222233334455666889999999999998764332
Q ss_pred cccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~ 736 (823)
........+||+.|||||++.+..++.++|||||||++|||+||+.||..... . ............ .+
T Consensus 167 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~---~~~~~~~~~~~~----~~--- 234 (277)
T d1o6ya_ 167 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--V---SVAYQHVREDPI----PP--- 234 (277)
T ss_dssp ------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--H---HHHHHHHHCCCC----CG---
T ss_pred cccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH--H---HHHHHHHhcCCC----CC---
Confidence 22234456899999999999999999999999999999999999999853221 1 111111111111 00
Q ss_pred cCCCHHHHHHHHHHHHHccccCcCCCC-CHHHHHHHHhcc
Q 003402 737 NEVSLPMLVRYINVALLCVQENAEDRP-TMSDVVSMINNE 775 (823)
Q Consensus 737 ~~~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~L~~~ 775 (823)
.......+..+.+++.+||+.||++|| |++++...|...
T Consensus 235 ~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~ 274 (277)
T d1o6ya_ 235 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 274 (277)
T ss_dssp GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence 011112345678899999999999999 899998887653
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.6e-35 Score=325.08 Aligned_cols=229 Identities=23% Similarity=0.248 Sum_probs=169.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC---hhhHHHHHH---HHHHHHhcCCCceeeEEeEEEeCCeEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLKEFKN---EMMLIAKLQHRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~---~~~~~~f~~---Ev~~l~~l~H~Niv~l~g~~~~~~~~~ 597 (823)
++|++.++||+|+||+||+|+.. +|+.||||++.+.. ......+.+ |+.+++.++|||||++++++.+.+..+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ 83 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence 67999999999999999999875 58999999986431 122333444 467777888999999999999999999
Q ss_pred EEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc
Q 003402 598 LIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~ 658 (823)
+|||||++|+|..+|...... |..++.||+.++.||+.+.++.+||+|||+|+.+....
T Consensus 84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~-- 161 (364)
T d1omwa3 84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 161 (364)
T ss_dssp EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC--
T ss_pred EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCc--
Confidence 999999999999998543221 11222334444566677899999999999999875432
Q ss_pred cccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCccccc
Q 003402 659 GNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~ 737 (823)
.....||+.|||||++.. ..|+.++|||||||+||||+||+.||......... .. ....... ..
T Consensus 162 --~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~-~~~~~~~----------~~ 226 (364)
T d1omwa3 162 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EI-DRMTLTM----------AV 226 (364)
T ss_dssp --CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH--HH-HHHSSSC----------CC
T ss_pred --ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH--HH-HHhcccC----------CC
Confidence 334689999999999975 46899999999999999999999998654332211 11 1110000 00
Q ss_pred CCCHHHHHHHHHHHHHccccCcCCCCC-----HHHHHH
Q 003402 738 EVSLPMLVRYINVALLCVQENAEDRPT-----MSDVVS 770 (823)
Q Consensus 738 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~ 770 (823)
..+......+.+++..||+.||++||| +.|+++
T Consensus 227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 227 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 111223456788999999999999999 688875
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-36 Score=324.19 Aligned_cols=228 Identities=23% Similarity=0.302 Sum_probs=171.3
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHH-hcCCCceeeEEeEEEeCCeEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIA-KLQHRNLVRLLGCCIEQGEKILI 599 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~-~l~H~Niv~l~g~~~~~~~~~lV 599 (823)
++|++.++||+|+||+||+|+.. +++.||||++++. .....+.+..|+.++. .++|||||++++++.+++..+||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 57999999999999999999875 4899999999753 2234567778887765 68999999999999999999999
Q ss_pred EEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccc
Q 003402 600 YEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660 (823)
Q Consensus 600 ~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~ 660 (823)
||||++|+|..++...... |..+..||+.++.||+.+.++.+||+|||+|+...... ..
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~--~~ 159 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AK 159 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--CC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhccccc--cc
Confidence 9999999999998643221 11112223333455666889999999999998765432 22
Q ss_pred cccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCC
Q 003402 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740 (823)
Q Consensus 661 ~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~ 740 (823)
.....||+.|||||++.+..|+.++|||||||++|||++|+.||..... ..+.... ..+. + ..+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i----~~~~------~----~~p 223 (320)
T d1xjda_ 160 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSI----RMDN------P----FYP 223 (320)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HHCC------C----CCC
T ss_pred ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH--HHHHHHH----HcCC------C----CCC
Confidence 3346899999999999999999999999999999999999999853221 1111111 1110 0 112
Q ss_pred HHHHHHHHHHHHHccccCcCCCCCHH-HHHH
Q 003402 741 LPMLVRYINVALLCVQENAEDRPTMS-DVVS 770 (823)
Q Consensus 741 ~~~~~~~~~l~~~Cl~~dP~~RPt~~-evl~ 770 (823)
.....++.+++..||+.||++||++. +|++
T Consensus 224 ~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 224 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 22345688899999999999999995 6754
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-35 Score=314.45 Aligned_cols=239 Identities=21% Similarity=0.232 Sum_probs=166.5
Q ss_pred eeeeeccccceeEEeeeec-CCcEEEEEEeccCChh-----hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 529 IQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ-----GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 529 ~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~-----~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.+++||+|+||+||+|+.. +++.||||+++..... ..+.+.+|+.++++++|||||++++++.+++..+|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 3589999999999999875 4899999998653221 124689999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
+.++++..++...... |..+..||+.++.||+.+.++.+||+|||+|+....... ....
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~--~~~~ 159 (299)
T d1ua2a_ 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR--AYTH 159 (299)
T ss_dssp CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC--CCCC
T ss_pred hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcc--cccc
Confidence 9998877666432211 112223344445667778999999999999987654332 2234
Q ss_pred ccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccc------cCcc-c
Q 003402 664 IVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHEL------MDPV-L 735 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l------~d~~-l 735 (823)
.+||+.|||||++... .|+.++|||||||++|||++|+.||.... ..+.+............... .... .
T Consensus 160 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~--~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T d1ua2a_ 160 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS--DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237 (299)
T ss_dssp SCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred eecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCC--HHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence 6899999999998755 57999999999999999999998875322 11222211111110000000 0000 0
Q ss_pred c--cCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 736 Q--NEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 736 ~--~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. ...+ ......+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 0 0011 1224568899999999999999999999874
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-35 Score=317.78 Aligned_cols=230 Identities=19% Similarity=0.235 Sum_probs=172.0
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
.++|++.++||+|+||+||+|... +++.||||.++... .....+.+|+++|++++|||||++++++.+.+..+|||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 367999999999999999999875 58899999997653 3345688999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcccccCHHHHH----------------------HHHhccccc--cCCCceeceeeceeecCCCccc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQLRV----------------------RIIDGIAQD--QHMNPKISDFGMARMFGGDELQ 658 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~~r~----------------------~i~~~ia~d--~~~~~KI~DFGla~~~~~~~~~ 658 (823)
|++|+|.++|..... .+...... ..+.||+.+ ....+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~~~~--~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~-- 158 (321)
T d1tkia_ 83 ISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-- 158 (321)
T ss_dssp CCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCC--
Confidence 999999999965321 12322222 222344434 45579999999999865432
Q ss_pred cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccC
Q 003402 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738 (823)
Q Consensus 659 ~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~ 738 (823)
......||+.|||||.+.+..|+.++||||+||++|||++|+.||..... ..+... ..... ...+.....
T Consensus 159 -~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~--~~~~~~---i~~~~---~~~~~~~~~- 228 (321)
T d1tkia_ 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIEN---IMNAE---YTFDEEAFK- 228 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHH---HHHTC---CCCCHHHHT-
T ss_pred -cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH--HHHHHH---HHhCC---CCCChhhcc-
Confidence 23346799999999999999999999999999999999999999853321 111111 11100 000000001
Q ss_pred CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 739 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
....++.+++..||+.||++|||+.|++++
T Consensus 229 ---~~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 229 ---EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ---TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 123467889999999999999999999874
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.8e-35 Score=312.53 Aligned_cols=229 Identities=19% Similarity=0.229 Sum_probs=172.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh---------hhHHHHHHHHHHHHhcC-CCceeeEEeEEEeC
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---------QGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQ 593 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~---------~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~ 593 (823)
++|++.++||+|+||+||+|+.. +++.||||+++.... ...+.+.+|+.++++++ |||||++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 68999999999999999999874 589999999865321 12346889999999997 99999999999999
Q ss_pred CeEEEEEEcccCCCchhhccCCCcccccCHHHHHH----------------------HHhccccccCCCceeceeeceee
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR----------------------IIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~r~~----------------------i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
+..+||||||++|+|.++|.... .+++..... .+.||+.+.++.+||+|||+|+.
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 159 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 159 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred cceEEEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeE
Confidence 99999999999999999996432 233333222 23455558899999999999998
Q ss_pred cCCCcccccccccccccccccccccc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYAL------EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~------~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 725 (823)
+..... ....+||+.|+|||++. ...++.++||||+||+||||++|+.||..... ..... .....
T Consensus 160 ~~~~~~---~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~--~~~~~---~i~~~- 230 (277)
T d1phka_ 160 LDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLR---MIMSG- 230 (277)
T ss_dssp CCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHHT-
T ss_pred ccCCCc---eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH--HHHHH---HHHhC-
Confidence 765332 23468999999999985 34578999999999999999999999854321 11111 11111
Q ss_pred ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 ~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.. +. ..........++.+++.+||+.||++|||+.||++.
T Consensus 231 ~~-~~-----~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 231 NY-QF-----GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp CC-CC-----CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CC-CC-----CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 10 00 011112344578899999999999999999998763
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-35 Score=323.88 Aligned_cols=225 Identities=20% Similarity=0.247 Sum_probs=174.9
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~---~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~ 600 (823)
++|++.++||+|+||+||+|+.. +|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+....++||
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 57999999999999999999875 5899999998643 2234578999999999999999999999999999999999
Q ss_pred EcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
||+.+|+|..++...... |...+.||+.++.||+.+.++.+||+|||+|+.+... .
T Consensus 121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~-----~ 195 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----T 195 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----B
T ss_pred ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc-----c
Confidence 999999998888542211 2222334444456777789999999999999987532 2
Q ss_pred ccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcccccCCCH
Q 003402 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~l~~~~~~ 741 (823)
....||+.|||||++.+..++.++|||||||+||||+||+.||.... ...+... ..... ...+.
T Consensus 196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~--~~~~~~~---i~~~~-----------~~~p~ 259 (350)
T d1rdqe_ 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--PIQIYEK---IVSGK-----------VRFPS 259 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHH---HHHCC-----------CCCCT
T ss_pred ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC--HHHHHHH---HhcCC-----------CCCCc
Confidence 34689999999999999999999999999999999999999985321 1111111 11110 01112
Q ss_pred HHHHHHHHHHHHccccCcCCC-----CCHHHHHH
Q 003402 742 PMLVRYINVALLCVQENAEDR-----PTMSDVVS 770 (823)
Q Consensus 742 ~~~~~~~~l~~~Cl~~dP~~R-----Pt~~evl~ 770 (823)
.....+.+++..||+.||.+| ||+.++++
T Consensus 260 ~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred cCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 234567889999999999999 48999986
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-35 Score=316.21 Aligned_cols=230 Identities=16% Similarity=0.133 Sum_probs=164.6
Q ss_pred cCcceee-eeccccceeEEeeee-cCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe----CCeEE
Q 003402 525 ENFSIQS-KLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVRLLGCCIE----QGEKI 597 (823)
Q Consensus 525 ~~f~~~~-~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l-~H~Niv~l~g~~~~----~~~~~ 597 (823)
++|.+.+ .||+|+||+||+|+. .+++.||||++++. +.+.+|+.++.++ +|||||++++++.+ ....+
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 6788775 599999999999987 45899999999653 5677899987655 89999999999876 46789
Q ss_pred EEEEcccCCCchhhccCCCcccccCHH----------------------HHHHHHhccccc---cCCCceeceeeceeec
Q 003402 598 LIYEYMVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIAQD---QHMNPKISDFGMARMF 652 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia~d---~~~~~KI~DFGla~~~ 652 (823)
||||||++|+|.++|...... .+... ||+..+.||+.+ ..+.+||+|||+|+..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~-~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCC-CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCC-CcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeec
Confidence 999999999999999753221 12222 222233344444 3567999999999987
Q ss_pred CCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccC
Q 003402 653 GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD 732 (823)
Q Consensus 653 ~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d 732 (823)
..... .....||+.|||||++.+..|+.++|||||||+||||+||+.||....... ............ +.
T Consensus 165 ~~~~~---~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~--~~~~~~~~i~~~---~~-- 234 (335)
T d2ozaa1 165 TSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--ISPGMKTRIRMG---QY-- 234 (335)
T ss_dssp CCCCC---CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCCSC---SS--
T ss_pred cCCCc---cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH--HHHHHHHHHhcC---CC--
Confidence 54432 234689999999999999999999999999999999999999985332211 000000000000 00
Q ss_pred cccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
............++.+++..||+.||++|||+.|++++
T Consensus 235 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 235 -EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp -SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 00000011234578899999999999999999999884
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-34 Score=309.77 Aligned_cols=243 Identities=22% Similarity=0.286 Sum_probs=169.2
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||+||+|+.. +++.||||+++... ....+++.+|++++++++|||||++++++.++++.++|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 68999999999999999999874 58999999996532 2335789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccc
Q 003402 602 YMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT 661 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~ 661 (823)
|+.++.+.......... |..+..||+.++.||+.+.+..+||+|||+|+....... ..
T Consensus 82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~--~~ 159 (298)
T d1gz8a_ 82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TY 159 (298)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB--CT
T ss_pred ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcc--cc
Confidence 99866554433322111 112222333445566678899999999999987754322 23
Q ss_pred ccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC-C--cc---ccccC--
Q 003402 662 KRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN-D--RA---HELMD-- 732 (823)
Q Consensus 662 ~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~-~--~~---~~l~d-- 732 (823)
....||+.|+|||.+.... ++.++|||||||++|||++|+.||..... ...+......... . .. ....+
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE--IDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCH--HHHHHHHHHhcCCCchhhccccccccccc
Confidence 3458999999999887766 48999999999999999999999853321 1111111111000 0 00 00000
Q ss_pred ccccc--C-----CCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 733 PVLQN--E-----VSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 733 ~~l~~--~-----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..... . ........+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000 0 011224567889999999999999999999885
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.1e-34 Score=304.93 Aligned_cols=242 Identities=19% Similarity=0.245 Sum_probs=172.6
Q ss_pred cCcceeeeeccccceeEEeeeecCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||+||+|+..+++.||||+++... ....+.|.+|+.++++++|||||++++++.+.+..++++||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 6799999999999999999999889999999997542 23357899999999999999999999999999999999999
Q ss_pred ccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccccccc
Q 003402 603 MVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
+.++.+..+....... |..+..||+.++.||+.+.++.+||+|||+|........ ....
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~ 159 (286)
T d1ob3a_ 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR--KYTH 159 (286)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCcc--ccce
Confidence 9988877776543221 112233344445677778999999999999987654322 2233
Q ss_pred ccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc------cccc------
Q 003402 664 IVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR------AHEL------ 730 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~------~~~l------ 730 (823)
..|++.|+|||.+.+. .++.++|||||||++|||++|+.||..... ............... ..+.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T d1ob3a_ 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE--ADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (286)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCH--HHHHHHHHHhhCCCChhhccchhhhhhcccc
Confidence 5789999999998765 469999999999999999999999854321 111111111110000 0000
Q ss_pred ---cCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 731 ---MDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 731 ---~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
..+.............+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000001112223456889999999999999999999975
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=2.5e-34 Score=303.47 Aligned_cols=221 Identities=21% Similarity=0.305 Sum_probs=163.0
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCCh------hhHHHHHHHHHHHHhcC--CCceeeEEeEEEeCCe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG------QGLKEFKNEMMLIAKLQ--HRNLVRLLGCCIEQGE 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~------~~~~~f~~Ev~~l~~l~--H~Niv~l~g~~~~~~~ 595 (823)
++|++.++||+|+||+||+|+.. +++.||||++++... ...+++.+|+.++++++ |||||++++++.+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 57999999999999999999875 589999999864311 12245778999999996 8999999999999999
Q ss_pred EEEEEEcccC-CCchhhccCCCcc-------------------cccCHHHHHHHHhcccccc-CCCceeceeeceeecCC
Q 003402 596 KILIYEYMVN-KSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQ-HMNPKISDFGMARMFGG 654 (823)
Q Consensus 596 ~~lV~Ey~~~-gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~-~~~~KI~DFGla~~~~~ 654 (823)
.++||||+.+ +++.+++...... |..+..||+.++.||..+. ++.+||+|||+|+....
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~ 163 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccc
Confidence 9999999976 5676666432110 1112222333344555564 47899999999987643
Q ss_pred CccccccccccccccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCc
Q 003402 655 DELQGNTKRIVGTYGYMSPEYALEGVF-SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDP 733 (823)
Q Consensus 655 ~~~~~~~~~~~Gt~~YmAPE~~~~~~~-s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~ 733 (823)
.. .....||+.|||||++.+..+ +.++|||||||++|||++|+.||.... . ..... -
T Consensus 164 ~~----~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----~-------i~~~~---~---- 221 (273)
T d1xwsa_ 164 TV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----E-------IIRGQ---V---- 221 (273)
T ss_dssp SC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----H-------HHHCC---C----
T ss_pred cc----ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----H-------Hhhcc---c----
Confidence 32 234689999999999987776 577899999999999999999984210 0 00000 0
Q ss_pred ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 ~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+.....++.+++.+||+.||++|||+.|+++.
T Consensus 222 ----~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 222 ----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp ----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 0111223567889999999999999999998774
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.4e-33 Score=302.60 Aligned_cols=243 Identities=22% Similarity=0.285 Sum_probs=166.7
Q ss_pred hcCcceeeeeccccceeEEeeeec-C-CcEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCceeeEEeEEEe----
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-N-GQEVAVKRLSNQS--GQGLKEFKNEMMLIAKL---QHRNLVRLLGCCIE---- 592 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~-~~~VAVK~l~~~~--~~~~~~f~~Ev~~l~~l---~H~Niv~l~g~~~~---- 592 (823)
.++|++.++||+|+||+||+|+.. + ++.||||+++... ......+.+|+.+++.+ +|||||++++++..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 478999999999999999999863 4 6789999986432 22233566777776655 89999999999864
Q ss_pred -CCeEEEEEEcccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccccCCCceeceeeceee
Q 003402 593 -QGEKILIYEYMVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARM 651 (823)
Q Consensus 593 -~~~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~ 651 (823)
....+++|||+.++.+.......... |...+.||+.++.||+.++++.+||+|||+++.
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~ 165 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 165 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence 34789999999998775544322111 122233344445666678899999999999986
Q ss_pred cCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc-----
Q 003402 652 FGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR----- 726 (823)
Q Consensus 652 ~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~----- 726 (823)
.... .......||+.|||||++.+..|+.++||||+||++|||++|+.||..... ...+...........
T Consensus 166 ~~~~---~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~ 240 (305)
T d1blxa_ 166 YSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPGEEDWP 240 (305)
T ss_dssp CCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCGGGSC
T ss_pred hccc---ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCH--HHHHHHHHHhhCCCchhccc
Confidence 5432 233457899999999999999999999999999999999999999854321 111111111100000
Q ss_pred ----c-cccc---CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 ----A-HELM---DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 ----~-~~l~---d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
. .... ...............+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 241 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 0000 0000011122234567789999999999999999998764
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=9.8e-33 Score=295.17 Aligned_cols=237 Identities=18% Similarity=0.198 Sum_probs=164.4
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCce-eeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL-VRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Ni-v~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||.||+|+.. +++.||||.+..... .+++..|++++++++|+|+ +.+.++..+.+..++||||
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~ 84 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 84 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence 46999999999999999999874 589999999875432 2468899999999987665 4555666788899999999
Q ss_pred ccCCCchhhccCCCcccccCHH----------------------HHHHHHhccc---cccCCCceeceeeceeecCCCcc
Q 003402 603 MVNKSLDVFLFDPTKKHLLGWQ----------------------LRVRIIDGIA---QDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~~~l~~~----------------------~r~~i~~~ia---~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
+. ++|...+..... .+.+. ||+.++.||+ .+.+..+||+|||+|+.+.....
T Consensus 85 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~ 161 (299)
T d1ckia_ 85 LG-PSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 161 (299)
T ss_dssp CC-CBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred cC-CchhhhhhhccC--CCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence 95 455554432211 12222 2233334443 24567899999999998754332
Q ss_pred c-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccch-hHHHHhhccCCcccccc
Q 003402 658 Q-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL-LGHAWSLCKNDRAHELM 731 (823)
Q Consensus 658 ~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l-~~~~~~~~~~~~~~~l~ 731 (823)
. .......||+.|||||.+.+..++.++|||||||++|||+||+.|+.......... ............
T Consensus 162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~----- 236 (299)
T d1ckia_ 162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP----- 236 (299)
T ss_dssp CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC-----
T ss_pred ccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCC-----
Confidence 1 22345689999999999999999999999999999999999999986543321111 100000000000
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhcc
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 775 (823)
.+.+ ....+.++.+++..||+.||++||+++++.+.|+..
T Consensus 237 ~~~~----~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 276 (299)
T d1ckia_ 237 IEVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276 (299)
T ss_dssp HHHH----TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred hhHh----ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 0011 112235678899999999999999999998888764
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.3e-33 Score=298.01 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=166.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--------C
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE--------Q 593 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~--------~ 593 (823)
++|++.++||+|+||+||+|+.. +|+.||||++... .....+++.+|+.+|++++||||+++++++.. .
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~ 89 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 89 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence 67999999999999999999974 6899999998643 23345779999999999999999999999865 3
Q ss_pred CeEEEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCC
Q 003402 594 GEKILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGG 654 (823)
Q Consensus 594 ~~~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~ 654 (823)
+..++||||+.++.+..+....... |..+..||+..+.||+.+.++.+||+|||+++.+..
T Consensus 90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~ 169 (318)
T d3blha1 90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 169 (318)
T ss_dssp -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC
T ss_pred ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeeccc
Confidence 4689999999988877655432211 111222333344566668899999999999988764
Q ss_pred Cccc--cccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccC---Cccc
Q 003402 655 DELQ--GNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKN---DRAH 728 (823)
Q Consensus 655 ~~~~--~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~---~~~~ 728 (823)
.... ......+||+.|+|||.+.+. .++.|+|||||||++|||++|+.||..... ............. ....
T Consensus 170 ~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~ 247 (318)
T d3blha1 170 AKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSITPEVWP 247 (318)
T ss_dssp -----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTST
T ss_pred ccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH--HHHHHHHHHhcCCCChhhcc
Confidence 3322 222346799999999998765 689999999999999999999999853221 1111111111100 0000
Q ss_pred --------cccCcccccCCCHH-------HHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 --------ELMDPVLQNEVSLP-------MLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 --------~l~d~~l~~~~~~~-------~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..+........... ....+++++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 00000000011111 12346789999999999999999999875
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=3.3e-32 Score=290.04 Aligned_cols=240 Identities=18% Similarity=0.207 Sum_probs=171.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCC-CceeeEEeEEEeCCeEEEEEEc
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQH-RNLVRLLGCCIEQGEKILIYEY 602 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H-~Niv~l~g~~~~~~~~~lV~Ey 602 (823)
++|++.++||+|+||+||+|+.. +++.||||.++... ..+++.+|++.+..++| +|++.+++++.++...++||||
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~ 82 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 82 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence 67999999999999999999865 58899999986542 22457889999999975 8999999999999999999999
Q ss_pred ccCCCchhhccCCCcc--------------------cccCHHHHHHHHhccccc-----cCCCceeceeeceeecCCCcc
Q 003402 603 MVNKSLDVFLFDPTKK--------------------HLLGWQLRVRIIDGIAQD-----QHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 603 ~~~gsL~~~l~~~~~~--------------------~~l~~~~r~~i~~~ia~d-----~~~~~KI~DFGla~~~~~~~~ 657 (823)
+ +++|.+++...... |..++.||+.++.||+.+ .++.+||+|||+|+.+.....
T Consensus 83 ~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~ 161 (293)
T d1csna_ 83 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 161 (293)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred c-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence 9 68998887543221 112222233333444443 256799999999998753321
Q ss_pred c-----cccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCcc-chhHHHHhhccCCcccccc
Q 003402 658 Q-----GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF-NLLGHAWSLCKNDRAHELM 731 (823)
Q Consensus 658 ~-----~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~l~ 731 (823)
. ......+||+.|||||.+.+..++.++|||||||++|||+||+.|+........ ................+
T Consensus 162 ~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-- 239 (293)
T d1csna_ 162 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE-- 239 (293)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH--
T ss_pred ccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHH--
Confidence 1 223457899999999999999999999999999999999999999864433211 11111111000000111
Q ss_pred CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhccc
Q 003402 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776 (823)
Q Consensus 732 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 776 (823)
+.. ..+.++.+++..|++.+|++||+++.+.+.|+..+
T Consensus 240 ---l~~----~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~ 277 (293)
T d1csna_ 240 ---LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 277 (293)
T ss_dssp ---HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred ---hcC----CCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 111 12346778889999999999999999988887653
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.9e-32 Score=295.54 Aligned_cols=233 Identities=22% Similarity=0.298 Sum_probs=170.6
Q ss_pred cCcceeeeeccccceeEEeeeec----CCcEEEEEEeccC----ChhhHHHHHHHHHHHHhcCC-CceeeEEeEEEeCCe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQ----SGQGLKEFKNEMMLIAKLQH-RNLVRLLGCCIEQGE 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~----~~~~VAVK~l~~~----~~~~~~~f~~Ev~~l~~l~H-~Niv~l~g~~~~~~~ 595 (823)
++|++.++||+|+||+||+|+.. +|+.||||.++.. .....+.+.+|++++++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 67999999999999999999752 3789999998643 12334678899999999966 899999999999999
Q ss_pred EEEEEEcccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~ 656 (823)
.++||||+.+|+|..++...... |..+..||+..+.||+.+.++.+||+|||+|+.+....
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~ 183 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 183 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccc
Confidence 99999999999999988543221 11122223333455666889999999999999775433
Q ss_pred cccccccccccccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccccccCcc
Q 003402 657 LQGNTKRIVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV 734 (823)
Q Consensus 657 ~~~~~~~~~Gt~~YmAPE~~~~~~--~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~d~~ 734 (823)
.. ......||+.|+|||.+.... ++.|+|||||||+||||++|+.||........ ...........
T Consensus 184 ~~-~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~--~~~i~~~~~~~--------- 251 (322)
T d1vzoa_ 184 TE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKS--------- 251 (322)
T ss_dssp GG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHC---------
T ss_pred cc-cccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcccC---------
Confidence 22 233468999999999997654 68899999999999999999999854432211 11111100000
Q ss_pred cccCCCHHHHHHHHHHHHHccccCcCCCCC-----HHHHHH
Q 003402 735 LQNEVSLPMLVRYINVALLCVQENAEDRPT-----MSDVVS 770 (823)
Q Consensus 735 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~ 770 (823)
....+.....++.+++..||+.||++||+ ++|+++
T Consensus 252 -~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 252 -EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 01122234567888999999999999994 788875
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1e-31 Score=286.03 Aligned_cols=244 Identities=20% Similarity=0.211 Sum_probs=173.8
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCeEEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYE 601 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~~~~lV~E 601 (823)
++|++.++||+|+||+||+|+.. +++.||||+++.. .....+++.+|+.+++.++|||||++++++.+....++|+|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 57999999999999999999975 5889999998643 23446789999999999999999999999999999999999
Q ss_pred cccCCCchhhccCCCcc-------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccccccc
Q 003402 602 YMVNKSLDVFLFDPTKK-------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTK 662 (823)
Q Consensus 602 y~~~gsL~~~l~~~~~~-------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~~~~ 662 (823)
|+.+++|..++...... |..+..||+.++.||+.+.++.+||+|||+|+....... ...
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~--~~~ 159 (292)
T d1unla_ 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR--CYS 159 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS--CCC
T ss_pred eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCc--cce
Confidence 99999988877543221 111122223334556667888999999999998754332 222
Q ss_pred cccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc------cccccCc--
Q 003402 663 RIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR------AHELMDP-- 733 (823)
Q Consensus 663 ~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~------~~~l~d~-- 733 (823)
...+++.|+|||.+.... ++.++|||||||++|||++|+.|+...... ............... .....+.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH-HHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCH-HHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 346788999999988765 699999999999999999999997433221 122221111111100 0000000
Q ss_pred -------ccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 734 -------VLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 734 -------~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
.............+.+++.+|++.||++|||++||++.
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00011122334567889999999999999999998774
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.97 E-value=1.7e-31 Score=289.38 Aligned_cols=241 Identities=17% Similarity=0.259 Sum_probs=169.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeC--CeEEEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQ--GEKILIY 600 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~--~~~~lV~ 600 (823)
++|++.++||+|+||+||+|+.. +++.||||+++.. ..+++.+|+.+|.+++ ||||+++++++... ...++||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence 57999999999999999999874 5899999999753 3467899999999995 99999999999854 5689999
Q ss_pred EcccCCCchhhccCCCcc----------------cccCHHHHHHHHhccccccC-CCceeceeeceeecCCCcccccccc
Q 003402 601 EYMVNKSLDVFLFDPTKK----------------HLLGWQLRVRIIDGIAQDQH-MNPKISDFGMARMFGGDELQGNTKR 663 (823)
Q Consensus 601 Ey~~~gsL~~~l~~~~~~----------------~~l~~~~r~~i~~~ia~d~~-~~~KI~DFGla~~~~~~~~~~~~~~ 663 (823)
||+++++|..+....... |..++.||+.++.||+.+.+ ..+||+|||+|+.+..... ...
T Consensus 112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~---~~~ 188 (328)
T d3bqca1 112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---YNV 188 (328)
T ss_dssp ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC---CCS
T ss_pred eecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCc---ccc
Confidence 999999998875432111 12223334444556666654 4689999999998754432 334
Q ss_pred ccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH--------hhc---cCC---ccc
Q 003402 664 IVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW--------SLC---KND---RAH 728 (823)
Q Consensus 664 ~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~--------~~~---~~~---~~~ 728 (823)
..||+.|+|||.+.+.. ++.++||||+||++|||++|+.|+............... ... ... ...
T Consensus 189 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 268 (328)
T d3bqca1 189 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 268 (328)
T ss_dssp CCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGG
T ss_pred cccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccc
Confidence 67999999999987654 799999999999999999999998654332111100000 000 000 000
Q ss_pred ccc--------CcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 ELM--------DPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 ~l~--------d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
... ..............++.+++.+||+.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp GTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 0011111112234567889999999999999999999863
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7.1e-32 Score=294.53 Aligned_cols=238 Identities=21% Similarity=0.261 Sum_probs=162.6
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------e
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG------E 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~------~ 595 (823)
++|++.++||+|+||+||+|+.. +++.||||+++.. .....+.+.+|+++|++++|||||+++++|...+ +
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 67999999999999999999875 5899999999753 3344568999999999999999999999998654 5
Q ss_pred EEEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
.++||||+ +.+|..++...... |..+..||+.++.||+.+.++.+||+|||+|+.....
T Consensus 98 ~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~-- 174 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-- 174 (346)
T ss_dssp CEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS--
T ss_pred EEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCc--
Confidence 79999999 55666665432211 1222333444455666789999999999999976433
Q ss_pred ccccccccccccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCC-----------
Q 003402 658 QGNTKRIVGTYGYMSPEYALEG-VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND----------- 725 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~-~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~----------- 725 (823)
.....||+.|||||.+.+. .++.++||||+||++|||++|+.|+..... ...+..........
T Consensus 175 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (346)
T d1cm8a_ 175 ---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--LDQLKEIMKVTGTPPAEFVQRLQSD 249 (346)
T ss_dssp ---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred ---cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCCh--HHHHHHHHhccCCCcHHHHhhhcch
Confidence 2346899999999998764 568999999999999999999999854321 11111110000000
Q ss_pred -------ccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 726 -------RAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 726 -------~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...+.....+. .........+.+++.+||+.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 250 EAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhhhhccCCcccccchH-HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000000000 1111223467789999999999999999999985
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.1e-32 Score=294.86 Aligned_cols=245 Identities=18% Similarity=0.233 Sum_probs=167.3
Q ss_pred cCcceeeeeccccceeEEeeee-cCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC----eEEE
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS-GQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQG----EKIL 598 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~VAVK~l~~~~-~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~~----~~~l 598 (823)
++|++.++||+|+||+||+|+. .+++.||||+++... ....+.+++|+.+|++++|||||++++++.... ..++
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~ 87 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence 5699999999999999999986 468999999997543 344568999999999999999999999997653 3355
Q ss_pred EEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCccc-c
Q 003402 599 IYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQ-G 659 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~-~ 659 (823)
++||+.+|+|.+++...... |..++.||+.++.||+.+.++.+||+|||+|+........ .
T Consensus 88 l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~ 167 (345)
T d1pmea_ 88 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 167 (345)
T ss_dssp EEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCC
T ss_pred EEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccce
Confidence 56677799999998543211 1222333444456677789999999999999876544322 2
Q ss_pred ccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCccc----------
Q 003402 660 NTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH---------- 728 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~---------- 728 (823)
.....+||+.|+|||.+.. ..++.++||||+||++|||++|+.||...... ................
T Consensus 168 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T d1pmea_ 168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL--DQLNHILGILGSPSQEDLNCIINLKA 245 (345)
T ss_dssp TTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHTCCCHHH
T ss_pred eeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHH--HHHHHHhhhccCCChhhhhhhhhhhh
Confidence 2345689999999999854 56789999999999999999999998543211 1111110000000000
Q ss_pred -cccCcc-cccCCC-----HHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 729 -ELMDPV-LQNEVS-----LPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 729 -~l~d~~-l~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
...... .....+ .....++.+++..||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 246 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000 000001 1123467889999999999999999999875
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.4e-31 Score=288.58 Aligned_cols=238 Identities=19% Similarity=0.182 Sum_probs=161.9
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------CeEEE
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ------GEKIL 598 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~------~~~~l 598 (823)
+|+..++||+|+||+||+|+.. +++.||||++..... .+.+|+++|++++|||||++++++... .+.+|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 4788899999999999999975 589999999975432 234799999999999999999999653 35789
Q ss_pred EEEcccCCCchhhccCCCcccccCH----------------------HHHHHHHhccccccC-CCceeceeeceeecCCC
Q 003402 599 IYEYMVNKSLDVFLFDPTKKHLLGW----------------------QLRVRIIDGIAQDQH-MNPKISDFGMARMFGGD 655 (823)
Q Consensus 599 V~Ey~~~gsL~~~l~~~~~~~~l~~----------------------~~r~~i~~~ia~d~~-~~~KI~DFGla~~~~~~ 655 (823)
|||||+++.+..+.........+.+ .||+.++.||+.+.+ ..+||+|||+++.+...
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~ 176 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC
Confidence 9999987754443321111112222 233334455656665 48999999999987544
Q ss_pred ccccccccccccccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHH----------HhhccC
Q 003402 656 ELQGNTKRIVGTYGYMSPEYALE-GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHA----------WSLCKN 724 (823)
Q Consensus 656 ~~~~~~~~~~Gt~~YmAPE~~~~-~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~----------~~~~~~ 724 (823)
.. .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...... ..+.... +.....
T Consensus 177 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~ 252 (350)
T d1q5ka_ 177 EP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREMNP 252 (350)
T ss_dssp SC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCC
T ss_pred cc---cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH-HHHHHHHHHhCCChHHhhhhhcc
Confidence 32 234689999999998875 46899999999999999999999998543211 1111100 000000
Q ss_pred ----CccccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 725 ----DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 725 ----~~~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
......................+.+++.+||+.||++|||+.|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00111110001111122234568889999999999999999999874
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.1e-31 Score=287.51 Aligned_cols=242 Identities=21% Similarity=0.208 Sum_probs=160.5
Q ss_pred cCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe------CCe
Q 003402 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIE------QGE 595 (823)
Q Consensus 525 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~------~~~ 595 (823)
++|++.++||+|+||+||+|+.. +|+.||||++... .....+++.+|+.++++++|||||++++++.. ..+
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 67999999999999999999875 5899999999754 33445679999999999999999999999964 368
Q ss_pred EEEEEEcccCCCchhhccCCCcc----------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcccc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK----------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQG 659 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~----------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~~~ 659 (823)
.++||||+.++.+.......... |..+..||+.++.||+.+.++.+||+|||+++......
T Consensus 97 ~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~--- 173 (355)
T d2b1pa1 97 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--- 173 (355)
T ss_dssp EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred eEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccc---
Confidence 99999999776655443211100 12222333344456666888999999999998764432
Q ss_pred ccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHH-------------------h
Q 003402 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW-------------------S 720 (823)
Q Consensus 660 ~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~-------------------~ 720 (823)
......||+.|+|||++.+..++.++||||+||+++||++|+.||...... ....... .
T Consensus 174 ~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T d2b1pa1 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI--DQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_dssp -------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHH--HHHHHHHHhccCCCHHHHHHhhhhHHH
Confidence 233467999999999999999999999999999999999999997533211 1000000 0
Q ss_pred hccCC------ccccccCccccc---CCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 721 LCKND------RAHELMDPVLQN---EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 721 ~~~~~------~~~~l~d~~l~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
..... ............ .........+.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 000011111100 0112346678999999999999999999999875
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.1e-30 Score=285.36 Aligned_cols=240 Identities=21% Similarity=0.241 Sum_probs=164.9
Q ss_pred hcCcceeeeeccccceeEEeeeec-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----Ce
Q 003402 524 TENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ-----GE 595 (823)
Q Consensus 524 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~--~~~~~~~f~~Ev~~l~~l~H~Niv~l~g~~~~~-----~~ 595 (823)
.++|++.++||+|+||+||+|+.. +++.||||+++.. +....+++.+|+.++++++|||+|++++++... ..
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 467999999999999999999864 6899999999754 234456789999999999999999999998643 34
Q ss_pred EEEEEEcccCCCchhhccCCCcc------------------cccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 596 KILIYEYMVNKSLDVFLFDPTKK------------------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 596 ~~lV~Ey~~~gsL~~~l~~~~~~------------------~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
.++|+||+.+|+|.+++...... |..+..||+.++.||+.+.++.+|++|||+|.....
T Consensus 97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~--- 173 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 173 (348)
T ss_dssp CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTG---
T ss_pred eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCc---
Confidence 56778888999999998643221 112223333344566668899999999999976532
Q ss_pred ccccccccccccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCccchhHHHHhhccCCc----------
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDR---------- 726 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~-~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~~~l~~~~~~~~~~~~---------- 726 (823)
......||+.|||||.+.+.. ++.++|||||||++|||++|+.||...... ..............
T Consensus 174 --~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~ 249 (348)
T d2gfsa1 174 --EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLILRLVGTPGAELLKKISSE 249 (348)
T ss_dssp --GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCHHHHTTCCCH
T ss_pred --ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCChHHhhhccch
Confidence 233467999999999877654 689999999999999999999998533211 11111110000000
Q ss_pred --------cccccCcccccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 003402 727 --------AHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSM 771 (823)
Q Consensus 727 --------~~~l~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 771 (823)
........+.. ........+.+++.+||+.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 250 SARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHHHHHTTSCCCCCCCHHH-HSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhcccCCCcchhh-hcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 00000000000 001123567889999999999999999999874
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=2.3e-25 Score=243.82 Aligned_cols=240 Identities=16% Similarity=0.156 Sum_probs=159.0
Q ss_pred CcceeeeeccccceeEEeeeec-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-----------CCceeeEEeEEEe-
Q 003402 526 NFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-----------HRNLVRLLGCCIE- 592 (823)
Q Consensus 526 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-----------H~Niv~l~g~~~~- 592 (823)
+|++.++||+|+||+||+|+.. +|+.||||+++.. ....+.+.+|+.++++++ |+|||++++++..
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 4999999999999999999874 6899999999764 234567889999988875 5789999998865
Q ss_pred -CCeEEEEEEcccCCCchhhccCCCcccc-----------------------cCHHHHHHHHhccccccCC------Cce
Q 003402 593 -QGEKILIYEYMVNKSLDVFLFDPTKKHL-----------------------LGWQLRVRIIDGIAQDQHM------NPK 642 (823)
Q Consensus 593 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~~-----------------------l~~~~r~~i~~~ia~d~~~------~~K 642 (823)
....+++++++..+.............. .+..||+.++.||+.+.++ .+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k 172 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 172 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence 3567777777766543322211111111 1222333344455544433 389
Q ss_pred eceeeceeecCCCccccccccccccccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc-----cchhHH
Q 003402 643 ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDS-----FNLLGH 717 (823)
Q Consensus 643 I~DFGla~~~~~~~~~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl~Elltg~~p~~~~~~~~-----~~l~~~ 717 (823)
|+|||.|+..... ....+||+.|||||.+....++.++||||+||+++||++|+.||....... ..+...
T Consensus 173 l~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~ 247 (362)
T d1q8ya_ 173 IADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 247 (362)
T ss_dssp ECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHH
T ss_pred Eeecccccccccc-----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHH
Confidence 9999999865322 234679999999999999999999999999999999999999986433210 011111
Q ss_pred HHhhcc-----------------CCccccccCcc----------cccCCCHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 003402 718 AWSLCK-----------------NDRAHELMDPV----------LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVS 770 (823)
Q Consensus 718 ~~~~~~-----------------~~~~~~l~d~~----------l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 770 (823)
...+-. .......+... ............+.+++..|++.||++|||++|+++
T Consensus 248 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~ 327 (362)
T d1q8ya_ 248 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327 (362)
T ss_dssp HHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 110000 00000000000 011234556778999999999999999999999987
Q ss_pred H
Q 003402 771 M 771 (823)
Q Consensus 771 ~ 771 (823)
+
T Consensus 328 H 328 (362)
T d1q8ya_ 328 H 328 (362)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Probab=99.81 E-value=8.6e-20 Score=163.76 Aligned_cols=112 Identities=25% Similarity=0.423 Sum_probs=94.1
Q ss_pred ccccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCC
Q 003402 41 ADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQS 120 (823)
Q Consensus 41 ~~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~ 120 (823)
+|+|.+||.|..|++|+| |.|+|+|...|+ |.|+.. .++||.||++.|.. .+.|.|+.||+|+|.|+
T Consensus 1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~~---~~~vW~s~~~~~~~--~~~l~l~~dGnLvl~~~- 67 (112)
T d1xd5a_ 1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYDN---NRAVWASGTNGKAS--GCVLKMQNDGNLVIYSG- 67 (112)
T ss_dssp CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEET---TEEEEECCCTTSCS--SEEEEECTTSCEEEEET-
T ss_pred CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEcC---CcEEEEccCccCCC--CcEEEEeccccEEEEec-
Confidence 589999999999999985 999999988775 556553 68999999998743 46899999999999997
Q ss_pred CCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCc
Q 003402 121 NGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTD 170 (823)
Q Consensus 121 g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTD 170 (823)
+..+|+++++.......|.|+|+|||||++.+ +.++|||+.+|+|
T Consensus 68 ~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~-----~~~~W~S~t~~~n 112 (112)
T d1xd5a_ 68 SRAIWASNTNRQNGNYYLILQRDRNVVIYDNS-----NNAIWATHTNVGN 112 (112)
T ss_dssp TEEEEECCCCCSCCCCEEEECTTSCEEEECTT-----SCEEEECCCCCCC
T ss_pred CCeEEEEeeccCCCceEEEEcCCCCEEEECCC-----CcEEecCCCccCC
Confidence 56788887765445668999999999999863 5789999999986
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Probab=99.78 E-value=5.4e-19 Score=157.15 Aligned_cols=107 Identities=21% Similarity=0.364 Sum_probs=90.0
Q ss_pred cccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCC
Q 003402 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSN 121 (823)
Q Consensus 42 ~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g 121 (823)
|+|.+|+.|..|++|++ |.|.|+|...|+ |.++.. .++||+||++.|... .+.|.|+.||+|+|.|++|
T Consensus 2 ~~L~~g~~L~~g~~l~~--g~~~l~~q~dgn-----Lvl~~~---~~~vW~ant~~~~~~-~~~l~l~~dGnLvl~~~~g 70 (109)
T d1kj1a_ 2 NLLTNGEGLYAGQSLDV--EPYHFIMQEDCN-----LVLYDH---STSVWASNTGILGKK-GCKAVLQSDGNFVVYDAEG 70 (109)
T ss_dssp CEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEEEET---TEEEEECCCCCTTCC-CCEEEECTTSCEEEECSSS
T ss_pred CCccCCCEEeCCCEEEe--CCEEEEecCCCe-----EEEEeC---CEEEEEeCCCCCCce-eEEEEEcCCceEEEEeCCC
Confidence 67999999999999975 889999987664 445432 689999999999654 5789999999999999999
Q ss_pred CeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCC
Q 003402 122 GTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDY 167 (823)
Q Consensus 122 ~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~ 167 (823)
.+||+|+++......+|.|+|+|||||++. .+|||+-|
T Consensus 71 ~~vW~s~t~~~~~~~~l~L~ddGNlvly~~--------~~W~S~t~ 108 (109)
T d1kj1a_ 71 RSLWASHSVRGNGNYVLVLQEDGNVVIYGS--------DIWSTGTY 108 (109)
T ss_dssp CEEEECCCCCCSSCCEEEECTTSCEEEECC--------EEEECCCC
T ss_pred cEEEEEeeECCCCCEEEEEeCCCcEEEECC--------CEecCCCc
Confidence 999999987545567899999999999963 39999865
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Probab=99.78 E-value=6e-19 Score=156.75 Aligned_cols=106 Identities=25% Similarity=0.364 Sum_probs=90.4
Q ss_pred cccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCC
Q 003402 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSN 121 (823)
Q Consensus 42 ~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g 121 (823)
|+|.+|+.|..|++|. +|.|.|.|...|| |.|+.. .++||.||++.|- ....|.|..+|+|+|.|++|
T Consensus 2 ~~L~~g~~L~~G~~l~--ng~~~l~~q~DGN-----Lvly~~---~~~vW~s~~~~~~--~~~~l~l~~~Gnlvl~~~~g 69 (108)
T d1jpca_ 2 NILYSGETLSTGEFLN--YGSFVFIMQEDCN-----LVLYDV---DKPIWATNTGGLS--RSCFLSMQTDGNLVVYNPSN 69 (108)
T ss_dssp CEEETTEEECTTCEEE--ETTEEEEECTTSC-----EEEEET---TEEEEECCCTTSC--SSCEEEECTTSCEEEECTTC
T ss_pred CCccCCCEecCCCEEE--cCCEEEEECCCCe-----EEEEeC---CceeeEeCCCCCC--CccEEEEeccceEEEECCCc
Confidence 6889999999999995 6999999998875 567653 5899999999883 34689999999999999999
Q ss_pred CeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCC
Q 003402 122 GTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDY 167 (823)
Q Consensus 122 ~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~ 167 (823)
.+||++++.......+|.|+|+|||||++. .+||||+|
T Consensus 70 ~~vWsS~t~~~~~~~~l~L~ddGNlVly~~--------~~W~S~t~ 107 (108)
T d1jpca_ 70 KPIWASNTGGQNGNYVCILQKDRNVVIYGT--------DRWATGTH 107 (108)
T ss_dssp CEEEECCCCCSCSCEEEEECTTSCEEEEEC--------CCCCCCCC
T ss_pred cceEEccccCCCCcEEEEEcCCCCEEEeCC--------CcccCCCC
Confidence 999999876544455789999999999964 28999987
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.67 E-value=4.4e-17 Score=147.05 Aligned_cols=102 Identities=21% Similarity=0.277 Sum_probs=85.3
Q ss_pred EEEecCCC-CcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCC
Q 003402 79 GIWYQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNST 157 (823)
Q Consensus 79 gIw~~~~~-~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~ 157 (823)
-|||..++ ++.+|++|++.|+.....+|.+..||||+|.+. +.++|++++.+......|.|+|+|||||+|. .
T Consensus 11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~-----~ 84 (120)
T d1dlpa2 11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTN-----Q 84 (120)
T ss_dssp EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEET-----T
T ss_pred eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEcC-----C
Confidence 48998888 899999999999987777999999999999886 6789999987555567899999999999987 3
Q ss_pred CCceeeecCCCCccccccccccccccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEE
Q 003402 158 ESYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVC 217 (823)
Q Consensus 158 ~~~lWQSFD~PTDTlLpgq~l~~~~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~ 217 (823)
+++|||||. +.++|.|.+.|++||...++
T Consensus 85 ~~~lW~S~t-------------------------------~~~~~~~~l~Lq~DGnlvlY 113 (120)
T d1dlpa2 85 NIAVWTSGN-------------------------------SRSAGRYVFVLQPDRNLAIY 113 (120)
T ss_dssp TEEEEECCC-------------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred CCEEEEeCC-------------------------------CCCCCcEEEEECCCCcEEEe
Confidence 588999973 23567899999999987654
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.55 E-value=1.5e-15 Score=135.50 Aligned_cols=109 Identities=21% Similarity=0.249 Sum_probs=89.1
Q ss_pred EEecCCC-CcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCC
Q 003402 80 IWYQQIP-DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTE 158 (823)
Q Consensus 80 Iw~~~~~-~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~ 158 (823)
|||.-.+ .+..|+.+.++++.+.+.+|.+..||||||.+. +.++|++++.+ ..+..|.|+|+|||||++. .+
T Consensus 3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~~-~~~vW~s~t~~-~~~~~l~l~~dGNLvl~d~-----~~ 75 (115)
T d1dlpa1 3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAG-ATGCRAVLQSDGLLVILTA-----QN 75 (115)
T ss_dssp CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEES-SSEEECCCCCS-CSCCBCCBCSSSCBCCBCT-----TT
T ss_pred EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEcC-CeeEEEcccCC-CCceEEEEeccCCEEEEcc-----CC
Confidence 6775444 677899999999987778999999999999885 78999999864 4567899999999999987 35
Q ss_pred CceeeecCCCCccccccccccccccCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 159 SYLWQSFDYPTDTMLQGMKLGWDLRTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 159 ~~lWQSFD~PTDTlLpgq~l~~~~~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
.+||||+- +.+.|.|.+.|++||...+ | +.++|.+|+
T Consensus 76 ~~vWsS~t-------------------------------~~~~g~y~l~Lq~DGNlvl--Y--~~~~Wssgt 112 (115)
T d1dlpa1 76 TIRWSSGT-------------------------------KGSIGNYVLVLQPDRTVTI--Y--GPGLWDSGT 112 (115)
T ss_dssp CCSCCCCC-------------------------------CCCSSCCEEEECSSSCEEE--E--CSEEEECSC
T ss_pred CEEEEcCC-------------------------------CCCCCCEEEEECCCCcEEE--e--CCCeecCCC
Confidence 78999763 3467899999999998654 5 347999886
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.44 E-value=2.8e-13 Score=121.36 Aligned_cols=103 Identities=19% Similarity=0.348 Sum_probs=81.0
Q ss_pred cccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCC
Q 003402 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSN 121 (823)
Q Consensus 42 ~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g 121 (823)
++|.++|+| ...+..|.|.|.|-..|| |.+ |.. .++||.||+..|. ....|.|..||+|+|.|++|
T Consensus 15 ~~l~~~q~l----~~~~~~~~y~l~mQ~DGN-----LVL-y~~--~~~vWssnt~~~~--~~~~l~l~~dGnLvL~d~~g 80 (119)
T d1b2pa_ 15 QILHATESL----EILFGTHVYRFIMQTDCN-----LVL-YDN--NNPIWATNTGGLG--NGCRAVLQPDGVLVVITNEN 80 (119)
T ss_dssp CEEETTCEE----EEEETTEEEEEEECTTSC-----EEE-EET--TEEEEECCCTTSC--SSCEEEECTTSCEEEECTTC
T ss_pred CEEeCCCeE----EEecCCceEEEEECCCCc-----EEE-EEC--CeEEEEecCCCCC--cceEEEEEeCCCEEEECCCC
Confidence 455555555 357789999999988775 333 432 6899999998773 34789999999999999999
Q ss_pred CeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecC
Q 003402 122 GTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFD 166 (823)
Q Consensus 122 ~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD 166 (823)
.+||++++.+......|.|+|+|||||++. .+|||-.
T Consensus 81 ~~vWsS~t~~~~~~~~l~Lq~DGNlvlYg~--------~~W~S~T 117 (119)
T d1b2pa_ 81 VTVWQSPVAGKAGHYVLVLQPDRNVVIYGD--------ALWATQT 117 (119)
T ss_dssp CEEEECSCCCCSSCEEEEECTTSCEEEEES--------EEEECCC
T ss_pred cEEEECCCcCCCCceEEEEcCCCCEEEECC--------CEeccCC
Confidence 999999886544455789999999999953 4999864
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.32 E-value=5.4e-14 Score=138.23 Aligned_cols=157 Identities=17% Similarity=0.094 Sum_probs=97.7
Q ss_pred ceeeeeccccceeEEeeeecCCcEEEEEEeccCC------------------hhhHHHHHHHHHHHHhcCCCceeeEEeE
Q 003402 528 SIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS------------------GQGLKEFKNEMMLIAKLQHRNLVRLLGC 589 (823)
Q Consensus 528 ~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~------------------~~~~~~f~~Ev~~l~~l~H~Niv~l~g~ 589 (823)
.+.++||+|+||+||+|+..+|+.||||.++... ......+.+|...+.+++|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 4678999999999999998889999999875210 0112345678899999999999998865
Q ss_pred EEeCCeEEEEEEcccCCCchhhccCCCc------------ccccCHHHHHHHHhccccccCCCceeceeeceeecCCCcc
Q 003402 590 CIEQGEKILIYEYMVNKSLDVFLFDPTK------------KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDEL 657 (823)
Q Consensus 590 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------------~~~l~~~~r~~i~~~ia~d~~~~~KI~DFGla~~~~~~~~ 657 (823)
. . .++||||++++.+..+...... .|..++.|++.++.||+.++ ..++|+|||+|+.......
T Consensus 83 ~--~--~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~-~~~~liDFG~a~~~~~~~~ 157 (191)
T d1zara2 83 E--G--NAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE-EGIWIIDFPQSVEVGEEGW 157 (191)
T ss_dssp E--T--TEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET-TEEEECCCTTCEETTSTTH
T ss_pred c--C--CEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC-CCEEEEECCCcccCCCCCc
Confidence 3 2 3799999998776554321100 01222333344445566564 4589999999987643221
Q ss_pred ccccccccccccccccccccCCCCCchhhHHHHHHHH
Q 003402 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLM 694 (823)
Q Consensus 658 ~~~~~~~~Gt~~YmAPE~~~~~~~s~ksDVwSfGvvl 694 (823)
.....+-+. -+ .|+ ....|+.++||||..--+
T Consensus 158 ~~~l~rd~~---~~-~~~-f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 158 REILERDVR---NI-ITY-FSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp HHHHHHHHH---HH-HHH-HHHHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHH---HH-HHH-HcCCCCCcccHHHHHHHH
Confidence 110000000 00 111 135678899999975433
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.17 E-value=1.6e-11 Score=108.97 Aligned_cols=98 Identities=22% Similarity=0.337 Sum_probs=75.4
Q ss_pred CCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCCCeEEEe
Q 003402 48 TLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSS 127 (823)
Q Consensus 48 ~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g~~vWst 127 (823)
|.|..++.| .+|.|.|.|-..|+ |.++.. .++||.+|...+ ..+.+.|..+|+|||.|.++.+||++
T Consensus 15 ~tl~~~~~l--~~g~~~l~~q~DGN-----LvL~~~---~~~vW~s~t~~~---~~~~l~l~~dGNLvl~d~~~~~vWsS 81 (115)
T d1dlpa1 15 QTLHAAQSL--ELSSFRFTMQSDCN-----LVLFDS---DVRVWASNTAGA---TGCRAVLQSDGLLVILTAQNTIRWSS 81 (115)
T ss_dssp SCCCTTCEE--CSTTEEEEECTTSC-----EEEEES---SSEEECCCCCSC---SCCBCCBCSSSCBCCBCTTTCCSCCC
T ss_pred ceecCCCcE--EcCCEEEEECCCCe-----EEEEcC---CeeEEEcccCCC---CceEEEEeccCCEEEEccCCCEEEEc
Confidence 445555555 36779999988775 556542 578999997543 34789999999999999999999999
Q ss_pred cccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecC
Q 003402 128 NVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFD 166 (823)
Q Consensus 128 ~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD 166 (823)
++.......+++|+++|||||++. .+|+|-.
T Consensus 82 ~t~~~~g~y~l~Lq~DGNlvlY~~--------~~Wssgt 112 (115)
T d1dlpa1 82 GTKGSIGNYVLVLQPDRTVTIYGP--------GLWDSGT 112 (115)
T ss_dssp CCCCCSSCCEEEECSSSCEEEECS--------EEEECSC
T ss_pred CCCCCCCCEEEEECCCCcEEEeCC--------CeecCCC
Confidence 886545556799999999999953 4899853
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=98.91 E-value=3.1e-09 Score=94.52 Aligned_cols=85 Identities=24% Similarity=0.284 Sum_probs=66.4
Q ss_pred eEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccccccccccccC
Q 003402 105 VLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLRT 184 (823)
Q Consensus 105 ~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~~~ 184 (823)
+|.+-.||||||.+. +.++|++++.+......+.|.++|||||+|.+ +.+||+|.
T Consensus 33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~-----g~~vWsS~------------------- 87 (119)
T d1b2pa_ 33 RFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNE-----NVTVWQSP------------------- 87 (119)
T ss_dssp EEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTT-----CCEEEECS-------------------
T ss_pred EEEECCCCcEEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEECCC-----CcEEEECC-------------------
Confidence 678889999999876 66899999875545678999999999999874 57889752
Q ss_pred CCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 185 GLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 185 g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
+.-+.|.|.+.|+.+|...++ . .+.|.+++
T Consensus 88 ------------t~~~~~~~~l~Lq~DGNlvlY--g--~~~W~S~T 117 (119)
T d1b2pa_ 88 ------------VAGKAGHYVLVLQPDRNVVIY--G--DALWATQT 117 (119)
T ss_dssp ------------CCCCSSCEEEEECTTSCEEEE--E--SEEEECCC
T ss_pred ------------CcCCCCceEEEEcCCCCEEEE--C--CCEeccCC
Confidence 122457789999999987664 2 47898875
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=98.87 E-value=3.6e-09 Score=94.33 Aligned_cols=97 Identities=23% Similarity=0.344 Sum_probs=68.2
Q ss_pred cccCCCCCcCCCCEEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCcEEEeccCCCCCCCCCceEEEeeCCcEEEEeCCC
Q 003402 42 DTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSN 121 (823)
Q Consensus 42 ~~i~~g~~l~~~~~lvS~~g~F~~GFf~~~~~~~~ylgIw~~~~~~tvVWvANr~~Pv~~~~~~L~l~~~G~LvL~d~~g 121 (823)
+++.++++|+. |.|.|.|=..|+ |.|+.. ..+||.+|- +..+....+.|..+|||||.|.++
T Consensus 24 ~~l~~~q~l~~--------g~y~L~~q~DGN-----LvL~~~---~~~vW~s~t--~~~~~~~~~~l~~~GnLvl~d~~~ 85 (120)
T d1dlpa2 24 QTLHATQSLQL--------SPYRLSMETDCN-----LVLFDR---DDRVWSTNT--AGKGTGCRAVLQPNGRMDVLTNQN 85 (120)
T ss_dssp CEECSSCCCBC--------SSCEEEEETTTE-----EEEEBT---TBCCSCCCC--CSSCSSCEEEEETTTEEEEEETTT
T ss_pred cEEcCCCeeEc--------CCEEEEEcCCCc-----EEEecC---CcEEEEEcc--ccCCCcEEEEEeCCeeEEEEcCCC
Confidence 34555555543 446666644332 444432 467898874 333445689999999999999999
Q ss_pred CeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeee
Q 003402 122 GTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQS 164 (823)
Q Consensus 122 ~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQS 164 (823)
.++|++++........+.|.++|||||++. .+|.|
T Consensus 86 ~~lW~S~t~~~~~~~~l~Lq~DGnlvlY~~--------~~W~t 120 (120)
T d1dlpa2 86 IAVWTSGNSRSAGRYVFVLQPDRNLAIYGG--------ALWTT 120 (120)
T ss_dssp EEEEECCCCCSSSCCEEEECSSSCEEEECC--------CCCBC
T ss_pred CEEEEeCCCCCCCcEEEEECCCCcEEEeCC--------CcccC
Confidence 999999986544556789999999999953 37875
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Probab=98.78 E-value=1.2e-08 Score=89.35 Aligned_cols=86 Identities=23% Similarity=0.360 Sum_probs=66.0
Q ss_pred ceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCcccccccccccccc
Q 003402 104 GVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDLR 183 (823)
Q Consensus 104 ~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~~ 183 (823)
-+|.+..||||||.+. +.+||++++.+......+.|.++|||||++.+ +.+||+|
T Consensus 21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~-----g~~vWsS------------------- 75 (108)
T d1jpca_ 21 FVFIMQEDCNLVLYDV-DKPIWATNTGGLSRSCFLSMQTDGNLVVYNPS-----NKPIWAS------------------- 75 (108)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTT-----CCEEEEC-------------------
T ss_pred EEEEECCCCeEEEEeC-CceeeEeCCCCCCCccEEEEeccceEEEECCC-----ccceEEc-------------------
Confidence 5789999999999875 67899999875545668999999999999874 5789985
Q ss_pred CCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCC
Q 003402 184 TGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGP 230 (823)
Q Consensus 184 ~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~ 230 (823)
.+....+.|.+.|+.+|...++ . .+.|.++.
T Consensus 76 ------------~t~~~~~~~~l~L~ddGNlVly--~--~~~W~S~t 106 (108)
T d1jpca_ 76 ------------NTGGQNGNYVCILQKDRNVVIY--G--TDRWATGT 106 (108)
T ss_dssp ------------CCCCSCSCEEEEECTTSCEEEE--E--CCCCCCCC
T ss_pred ------------cccCCCCcEEEEEcCCCCEEEe--C--CCcccCCC
Confidence 1122456788999999987654 2 34676654
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Probab=98.76 E-value=2.4e-08 Score=87.38 Aligned_cols=87 Identities=26% Similarity=0.377 Sum_probs=65.9
Q ss_pred ceEEEeeCCcEEEEeCCCCeEEEecccCC-CCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccccccccccc
Q 003402 104 GVLTVSNRGNLVLLNQSNGTIWSSNVSRE-VKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDL 182 (823)
Q Consensus 104 ~~L~l~~~G~LvL~d~~g~~vWst~~~~~-~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~ 182 (823)
-.|.+..||||+|.+ .+.+||++|+... .....+.|.++|||||++.+ +.+||+|
T Consensus 21 ~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~-----g~~vW~s------------------ 76 (109)
T d1kj1a_ 21 YHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAE-----GRSLWAS------------------ 76 (109)
T ss_dssp EEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEECSS-----SCEEEEC------------------
T ss_pred EEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeCC-----CcEEEEE------------------
Confidence 578889999999986 4678999987632 33567899999999999873 5788986
Q ss_pred cCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcCCeeeeecCCC
Q 003402 183 RTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPW 231 (823)
Q Consensus 183 ~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~yw~sg~w 231 (823)
.+..+.|.|.+.|+.+|+..+ |. .+.|.|+++
T Consensus 77 -------------~t~~~~~~~~l~L~ddGNlvl--y~--~~~W~S~t~ 108 (109)
T d1kj1a_ 77 -------------HSVRGNGNYVLVLQEDGNVVI--YG--SDIWSTGTY 108 (109)
T ss_dssp -------------CCCCCSSCCEEEECTTSCEEE--EC--CEEEECCCC
T ss_pred -------------eeECCCCCEEEEEeCCCcEEE--EC--CCEecCCCc
Confidence 112235678999999998765 43 368988764
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Probab=98.51 E-value=2.2e-07 Score=81.66 Aligned_cols=88 Identities=25% Similarity=0.418 Sum_probs=65.9
Q ss_pred CceEEEeeCCcEEEEeCCCCeEEEecccCCCCCcEEEEeeCCCEEEEeCCCCCCCCCceeeecCCCCccccccccccccc
Q 003402 103 NGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLWQSFDYPTDTMLQGMKLGWDL 182 (823)
Q Consensus 103 ~~~L~l~~~G~LvL~d~~g~~vWst~~~~~~~~~~a~LlDsGNlVl~~~~~~~~~~~~lWQSFD~PTDTlLpgq~l~~~~ 182 (823)
.-.|.+..||||||.+ .+.+||++++.+....+.+.|..+|||||++.+ ..+|.|
T Consensus 20 ~~~l~~q~DGNLvly~-~~~~vW~s~~~~~~~~~~l~l~~dGnLvl~~~~------~~~w~s------------------ 74 (112)
T d1xd5a_ 20 GYLFIIQNDCNLVLYD-NNRAVWASGTNGKASGCVLKMQNDGNLVIYSGS------RAIWAS------------------ 74 (112)
T ss_dssp TEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSEEEEECTTSCEEEEETT------EEEEEC------------------
T ss_pred CEEEEEcCCCCEEEEc-CCcEEEEccCccCCCCcEEEEeccccEEEEecC------CeEEEE------------------
Confidence 3579999999999987 478999998765455678999999999999852 345543
Q ss_pred cCCCeeEEEEeCCCCCCCCcceEEeeccCCCcEEEEEcC-CeeeeecCC
Q 003402 183 RTGLERYQTSWKSADDPSPGNFTHRLDIHVLPQVCVYNG-SAKYTCTGP 230 (823)
Q Consensus 183 ~~g~~~~l~Sw~s~~dps~G~~~l~~~~~~~~~~~~~~~-~~~yw~sg~ 230 (823)
.+....|.|.+.|+.+|...+ |+. ..+.|.|+.
T Consensus 75 -------------~t~~~~~~~~l~L~ddGNlvl--y~~~~~~~W~S~t 108 (112)
T d1xd5a_ 75 -------------NTNRQNGNYYLILQRDRNVVI--YDNSNNAIWATHT 108 (112)
T ss_dssp -------------CCCCSCCCCEEEECTTSCEEE--ECTTSCEEEECCC
T ss_pred -------------eeccCCCceEEEEcCCCCEEE--ECCCCcEEecCCC
Confidence 222345678999999998755 443 457898875
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.15 E-value=0.32 Score=46.97 Aligned_cols=94 Identities=11% Similarity=-0.011 Sum_probs=66.4
Q ss_pred HHHHHhcCcceeeeeccccceeEEeeeecCCcEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCeEE
Q 003402 519 SVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCCIEQGEKI 597 (823)
Q Consensus 519 ~~~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~VAVK~l~~~~~~~~~~f~~Ev~~l~~l~-H~Niv~l~g~~~~~~~~~ 597 (823)
++....+.|+..+..+-++...||+... +++.+.||+...........+.+|+..+..++ |--+-+++.+..+++..+
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~ 86 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence 3445556777666655455578998865 45667788876544333445778888887764 434567888888899999
Q ss_pred EEEEcccCCCchhhcc
Q 003402 598 LIYEYMVNKSLDVFLF 613 (823)
Q Consensus 598 lV~Ey~~~gsL~~~l~ 613 (823)
+|||++++..+.....
T Consensus 87 lv~~~l~G~~~~~~~~ 102 (263)
T d1j7la_ 87 LLMSEADGVLCSEEYE 102 (263)
T ss_dssp EEEECCSSEEHHHHTT
T ss_pred EEEEeccccccccccc
Confidence 9999999988876553
|
| >d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Fibrillin-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.42 E-value=0.069 Score=34.20 Aligned_cols=31 Identities=29% Similarity=0.577 Sum_probs=24.7
Q ss_pred CCc-cccccCCCcccccC-CCCccccCCCCcccC
Q 003402 302 PFC-HYGDCGPNSICSVD-QTSHCECLEGFKFKS 333 (823)
Q Consensus 302 ~~C-~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~~ 333 (823)
|+| +-..||. |.|+.- +.-.|.|-.||+|-.
T Consensus 2 dECsignpCGn-GTCtNviGgFec~C~~GFepgp 34 (39)
T d1emoa2 2 DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 34 (39)
T ss_dssp CGGGTTCSSSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CccccCCccCC-ceeeecccceEEeecCCcCCCc
Confidence 679 7888985 889754 567899999999853
|
| >d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Factor X, N-terminal module species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.86 E-value=0.11 Score=34.82 Aligned_cols=30 Identities=30% Similarity=0.674 Sum_probs=24.2
Q ss_pred CCccccccCCCcccccC-CCCccccCCCCcc
Q 003402 302 PFCHYGDCGPNSICSVD-QTSHCECLEGFKF 331 (823)
Q Consensus 302 ~~C~~~~CG~~g~C~~~-~~~~C~C~~Gf~~ 331 (823)
|+|....|...|.|... ..-.|.|++||.-
T Consensus 1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G 31 (39)
T d1xkba1 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEG 31 (39)
T ss_dssp CTTTTCCCCSSCEECCCSSSCCEECCTTEET
T ss_pred CcCCCCCCCCCcEEECCCCCEEEECCCCCCc
Confidence 56877889999999764 4578999999964
|
| >d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Neurogenic locus notch homolog protein 1, Notch1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.54 E-value=0.098 Score=35.10 Aligned_cols=30 Identities=20% Similarity=0.554 Sum_probs=24.4
Q ss_pred CCccccccCCCcccccC-CCCccccCCCCcc
Q 003402 302 PFCHYGDCGPNSICSVD-QTSHCECLEGFKF 331 (823)
Q Consensus 302 ~~C~~~~CG~~g~C~~~-~~~~C~C~~Gf~~ 331 (823)
|+|....|...|.|... +.-.|.|++||.-
T Consensus 2 d~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G 32 (39)
T d2vj3a2 2 NECVSNPCQNDATCLDQIGEFQCICMPGYEG 32 (39)
T ss_dssp CTTTTCCCCSSCEEEECSSCEEEECCTTEES
T ss_pred cCCcCCCCCCCCEEECCCCCEEEeCCCCCcc
Confidence 67877889999999764 4568999999964
|
| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Neurogenic locus notch homolog protein 1, Notch1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.79 E-value=0.11 Score=35.40 Aligned_cols=30 Identities=23% Similarity=0.586 Sum_probs=23.9
Q ss_pred CCc-c-ccccCCCcccccC-CCCccccCCCCcc
Q 003402 302 PFC-H-YGDCGPNSICSVD-QTSHCECLEGFKF 331 (823)
Q Consensus 302 ~~C-~-~~~CG~~g~C~~~-~~~~C~C~~Gf~~ 331 (823)
|+| . ...|..+|.|... +.-.|.|++||+-
T Consensus 4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G 36 (42)
T d2vj3a1 4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTG 36 (42)
T ss_dssp CTTTSSSCSSSTTCEEEECSSSEEEECCTTEES
T ss_pred ccccCCCCCCCCCcEeECCCCCEEeECCCCCcC
Confidence 678 3 6789999999765 4568999999963
|
| >d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Neurogenic locus notch homolog protein 1, Notch1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.88 E-value=0.19 Score=32.80 Aligned_cols=30 Identities=30% Similarity=0.561 Sum_probs=23.9
Q ss_pred CCccccccCCCcccccC-CCCccccCCCCcc
Q 003402 302 PFCHYGDCGPNSICSVD-QTSHCECLEGFKF 331 (823)
Q Consensus 302 ~~C~~~~CG~~g~C~~~-~~~~C~C~~Gf~~ 331 (823)
|+|....|...|.|... ..-.|.|++||.-
T Consensus 1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G 31 (35)
T d2vj3a3 1 DECASSPCLHNGRCLDKINEFQCECPTGFTG 31 (35)
T ss_dssp CTTTTCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred CCCCCCCCCCCcEEECCCCCeEEECCCCCCC
Confidence 56877889999999754 4568999999964
|
| >d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Factor IX (IXa) species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.88 E-value=0.17 Score=33.90 Aligned_cols=31 Identities=26% Similarity=0.516 Sum_probs=25.2
Q ss_pred CCCccccccCCCcccccC-CCCccccCCCCcc
Q 003402 301 DPFCHYGDCGPNSICSVD-QTSHCECLEGFKF 331 (823)
Q Consensus 301 ~~~C~~~~CG~~g~C~~~-~~~~C~C~~Gf~~ 331 (823)
.|+|....|-..|.|... ....|.|++||.-
T Consensus 3 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G 34 (39)
T d1edmb_ 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCS
T ss_pred cccCCCCCCCCCcEEEcCCCCEEEECCCCCCC
Confidence 378977889999999754 4578999999964
|
| >d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Fibrillin-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.98 E-value=0.17 Score=34.54 Aligned_cols=30 Identities=23% Similarity=0.583 Sum_probs=23.4
Q ss_pred CCc--cccccCCCcccccC-CCCccccCCCCccc
Q 003402 302 PFC--HYGDCGPNSICSVD-QTSHCECLEGFKFK 332 (823)
Q Consensus 302 ~~C--~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~ 332 (823)
|+| ..+.|. ++.|... ++-.|.|++||...
T Consensus 3 dEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~ 35 (42)
T d1lmja2 3 DECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 35 (42)
T ss_dssp CHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred cccCCCCCCCC-CCEeECCCCCeEEeCCCCCeEC
Confidence 678 477785 7899765 45689999999875
|