Citrus Sinensis ID: 003442

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------82
MTTSSNAVAIVPCSSFTCLCRSASKLYGEVKVSGLGFGVERAFVRVSNPCCSRRTHVATLRYRLNAIDTRIVENAQTTATATVEIPVSCYQIIGVPNQAEKDEIVKSVMDLKRAEIEEGYTMDAFMSRQDVLMDVRDKLLFEPEYAGNIRENIPPKPSLKIQWAWLPAALCLLQEVGEEKLVLDIGRAALQHPNAKPYAHDFLLSMALAECAIAKVAFEKNNVSQGFEALARAQCLLRSKVSLGNMPLLSQIEESLEELAPACTLELLGMPHSPENAERRRGAIAALRELIRQGLDVETSCRVQDWPCFLSRALNRLMAAEVVDLLPWDDLAITRKNKKSLESQNQRVVIDFNCFYIALIAHVALGFSSRQIELISKAKTICDCLIASESIDLKFEEAFCLFLLGQGTEAEAVEKLQQLELNSNPAMRSSFSGKEKKEISGAKPSVEMWLKDAVLSVFPDTQDCSPSLVNFFKGEKKTPAIKKCKGPPQTPLTMSQRPLSSALASDGRDFEDSHTSIKSSRHLGSAVKQLTPTDLQSPLVASKNSNGNNVSPSSAQLERGLGLQRSKVWESWLAGRNGIERIAFAAVLGCIMFLAVKLSGIRSNSVRNLSSSQQNMQMSSFVRTTDSSLDDSLGRTCIKRHGIASRLTELIKMVKLLFRNTSDTLYSQSSCLPASLSTSNIAVTQRPMPLEEAEALVKQWQAIKAEALGPNHEVHSLSEALDESMLVQWEALADAAKARSCYWRFVLLQLTIVQADIISHGGVGEIAEIEAVLEEAAELVDESQPKNPNYYSSYKIRYVLRKKDDGTWRFCKGDIQTPS
ccccccccEEEcccccccccccccccccccCEccccccccEEEcccccccccccccHHHHHHHHHHccccccccccccccccCCcccccEEEccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccccCECccccHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHcccccccccccccHHHHHHHHHcccccccccccccccHHHHccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcEEEEEEEEEEEccccccEEEEEEEEEEEEEEccccccccccccccEEEEEEEEEcccccEEEEEccccccc
********AIVPCSSFTCLCRSASKLYGEVKVSGLGFGVERAFVRVSNPCCSRRTHVATLRYRLNAIDTRIVENAQTTATATVEIPVSCYQIIGVPNQAEKDEIVKSVMDLKRAEIEEGYTMDAFMSRQDVLMDVRDKLLFEPEYAGNIRENIPPKPSLKIQWAWLPAALCLLQEVGEEKLVLDIGRAALQHPNAKPYAHDFLLSMALAECAIAKVAFEKNNVSQGFEALARAQCLLRSKVSLGNMPLLSQIEESLEELAPACTLELLGM***********GAIAALRELIRQGLDVETSCRVQDWPCFLSRALNRLMAAEVVDLLPWDDLAITRK*******QNQRVVIDFNCFYIALIAHVALGFSSRQIELISKAKTICDCLIASESIDLKFEEAFCLFLLGQGTEAEAV***************************GAKPSVEMWLKDAVLSVFPDTQDCSPSLVNFFKGEK*****************************************************************************************************************C******************************************LGRTCIKRHGIASRLTELIKMVKLLFRNTS****************************EEAEALVKQWQAIKAEALGPNHEVHSLSEALDESMLVQWEALADAAKARSCYWRFVLLQLTIVQADIISHGGVGEIAEIEAVLEEAAELV********NYYSSYKIRYVLRKKDDGTWRFCKGDIQT**
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MTTSSNAVAIVPCSSFTCLCRSASKLYGEVKVSGLGFGVERAFVRVSNPCCSRRTHVATLRYRLNAIDTRIVENAQTTATATVEIPVSCYQIIGVPNQAEKDEIVKSVMDLKRAEIEEGYTMDAFMSRQDVLMDVRDKLLFEPEYAGNIRENIPPKPSLKIQWAWLPAALCLLQEVGEEKLVLDIGRAALQHPNAKPYAHDFLLSMALAECAIAKVAFEKNNVSQGFEALARAQCLLRSKVSLGNMPLLSQIEESLEELAPACTLELLGMPHSPENAERRRGAIAALRELIRQGLDVETSCRVQDWPCFLSRALNRLMAAEVVDLLPWDDLAITRKNKKSLESQNQRVVIDFNCFYIALIAHVALGFSSRQIELISKAKTICDCLIASESIDLKFEEAFCLFLLGQGTEAEAVEKLQQLELNSNPAMRSSFSGKEKKEISGAKPSVEMWLKDAVLSVFPDTQDCSPSLVNFFKGEKKTPAIKKCKGPPQTPLTMSQRPLSSALASDGRDFEDSHTSIKSSRHLGSAVKQLTPTDLQSPLVASKNSNGNNVSPSSAQLERGLGLQRSKVWESWLAGRNGIERIAFAAVLGCIMFLAVKLSGIRSNSVRNLSSSQQNMQMSSFVRTTDSSLDDSLGRTCIKRHGIASRLTELIKMVKLLFRNTSDTLYSQSSCLPASLSTSNIAVTQRPMPLEEAEALVKQWQAIKAEALGPNHEVHSLSEALDESMLVQWEALADAAKARSCYWRFVLLQLTIVQADIISHGGVGEIAEIEAVLEEAAELVDESQPKNPNYYSSYKIRYVLRKKDDGTWRFCKGDIQTPS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Plastid division protein CDP1, chloroplastic Component of the plastid division machinery required for PDV1 localization to constriction sites. Involved in chloroplast division site placement. Seems to inhibit FtsZ assembly, functioning as an antagonistic regulator of FtsZ dynamics against ARC6.probableQ8VY16

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2CUG, chain A
Confidence level:probable
Coverage over the Query: 83-149
View the alignment between query and template
View the model in PyMOL