Citrus Sinensis ID: 003468

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------
MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDKAIFFF
ccccccccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccEEEccccccccccccccccccEEEEccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccEEEEcEEEEEEEEccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccccccccEEEEEEEEcccccccccEEEECccccccccccccccccccccHHHHHHHHHHHHcccccEECcccCEEECcccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccEEcccccccccEEEEEccccccEEEEEccccHHHHHHcccccccccEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEECcccccccccccccccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHccccccccccccccccHHHHcccHHHHHHHcccccEEEcccccHHHHHHHHHHHcccEEEEccccccccHHHccccccccccccHHHHHHHcccHHHcccccHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcc
*************************AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHE*S***EDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDKAIFFF
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDKAIFFF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Calcium-transporting ATPase 1, endoplasmic reticulum-type This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the endoplasmic reticulum lumen. Also regulate manganese ion homeostasis by pumping it into endomembrane compartments. Can also transport zinc.probableP92939
Calcium-transporting ATPase 4, endoplasmic reticulum-type This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment.probableQ9XES1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.3.-3'-nucleotidase.probable
3.6.3.8Transferred entry: 3.6.3.8.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3B8C, chain A
Confidence level:very confident
Coverage over the Query: 24-216,229-313,325-401,413-420,434-451,462-478,500-548,560-592,613-807
View the alignment between query and template
View the model in PyMOL
Template: 1MHS, chain A
Confidence level:very confident
Coverage over the Query: 34-98,112-216,229-402,417-420,434-481,500-589,618-806
View the alignment between query and template
View the model in PyMOL
Template: 3AR4, chain A
Confidence level:very confident
Coverage over the Query: 23-596,607-812
View the alignment between query and template
View the model in PyMOL
Template: 3N23, chain A
Confidence level:confident
Coverage over the Query: 117-319,331-419,432-475,496-794
View the alignment between query and template
View the model in PyMOL