Citrus Sinensis ID: 003468
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 817 | 2.2.26 [Sep-21-2011] | |||||||
| P92939 | 1061 | Calcium-transporting ATPa | yes | no | 0.969 | 0.746 | 0.823 | 0.0 | |
| Q9XES1 | 1061 | Calcium-transporting ATPa | yes | no | 0.969 | 0.746 | 0.821 | 0.0 | |
| Q42883 | 1048 | Calcium-transporting ATPa | N/A | no | 0.946 | 0.737 | 0.645 | 0.0 | |
| O23087 | 1054 | Calcium-transporting ATPa | no | no | 0.946 | 0.733 | 0.641 | 0.0 | |
| P70083 | 996 | Sarcoplasmic/endoplasmic | N/A | no | 0.910 | 0.746 | 0.492 | 0.0 | |
| P13585 | 994 | Sarcoplasmic/endoplasmic | yes | no | 0.905 | 0.744 | 0.489 | 0.0 | |
| Q92105 | 994 | Sarcoplasmic/endoplasmic | N/A | no | 0.908 | 0.746 | 0.489 | 0.0 | |
| Q9YGL9 | 1042 | Sarcoplasmic/endoplasmic | yes | no | 0.902 | 0.707 | 0.474 | 0.0 | |
| Q0VCY0 | 993 | Sarcoplasmic/endoplasmic | yes | no | 0.905 | 0.745 | 0.491 | 0.0 | |
| P04191 | 1001 | Sarcoplasmic/endoplasmic | yes | no | 0.905 | 0.739 | 0.485 | 0.0 |
| >sp|P92939|ECA1_ARATH Calcium-transporting ATPase 1, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1329 bits (3440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/794 (82%), Positives = 721/794 (90%), Gaps = 2/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKGS++ K+ + + N +TFPAWAKDV ECEE + V+ + GLS EV KR +IYG
Sbjct: 1 MGKGSEDLVKKESLNSTPVNSDTFPAWAKDVAECEEHFVVSREKGLSSDEVLKRHQIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRILL AAV+SFVLA++DG+EGGEM ITAFVEPLVIF
Sbjct: 61 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ SL AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 241 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP+GRMDANLQ IAKI+A+CNDA VEQS +V+ GMPTEAALKV+VEKMGFP
Sbjct: 421 RDGKIEDWPMGRMDANLQMIAKIAAICNDANVEQSDQQFVSRGMPTEAALKVLVEKMGFP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG+N SS DVLRCC+LW+ LEQR ATLEFDRDRKSMGV+V+SSSGNK LLVKGAVE
Sbjct: 481 EGLNEASSDG--DVLRCCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGNKLLLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLDGS ELDQYSRDLILQSL++MS +ALRCLGFAY D +F TYDG E
Sbjct: 539 NVLERSTHIQLLDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NYSSIES L+FVG VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 599 DHPAHQQLLNPSNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TG EFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 659 TAEAICREIGVFEADEDISSRSLTGIEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASDMVLADDNF TIVAAVGE
Sbjct: 719 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the endoplasmic reticulum lumen. Also regulate manganese ion homeostasis by pumping it into endomembrane compartments. Can also transport zinc. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9XES1|ECA4_ARATH Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1326 bits (3431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/794 (82%), Positives = 717/794 (90%), Gaps = 2/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKG ++ G + E +TFPAW KDV ECEEK+GV+ + GLS EV KR +IYG
Sbjct: 1 MGKGGEDCGNKQTNSSELVKSDTFPAWGKDVSECEEKFGVSREKGLSTDEVLKRHQIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRILL AAV+SFVLA++DG+EGGEM ITAFVEPLVIF
Sbjct: 61 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ SL AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 241 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP GRMDANLQ IAKI+A+CNDA VE+S +V+ GMPTEAALKV+VEKMGFP
Sbjct: 421 RDGKIEDWPTGRMDANLQMIAKIAAICNDANVEKSDQQFVSRGMPTEAALKVLVEKMGFP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG+N SS +VLRCC+LW+ LEQR ATLEFDRDRKSMGV+V+SSSG K LLVKGAVE
Sbjct: 481 EGLNEASSDG--NVLRCCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLDGS ELDQYSRDLILQSL +MS +ALRCLGFAY D +F TYDG E
Sbjct: 539 NVLERSTHIQLLDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NYSSIES LVFVG VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 599 DHPAHQQLLNPSNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TGKEFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 659 TAEAICREIGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASD+VLADDNF TIVAAVGE
Sbjct: 719 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q42883|ECAP_SOLLC Calcium-transporting ATPase, endoplasmic reticulum-type OS=Solanum lycopersicum GN=LCA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/788 (64%), Positives = 606/788 (76%), Gaps = 15/788 (1%)
Query: 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFN 80
E+ FPAW+ V++C ++Y V + GLS EV KRRE YG NELEK +G +++L+LEQF+
Sbjct: 3 EKPFPAWSWSVDQCLKEYQVKLEKGLSTYEVDKRRERYGLNELEKEKGKPLWRLVLEQFD 62
Query: 81 DTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKA 140
DTLV+ILL AA +SFVLA+ + +E GE A+VEPLVI IL++NAIVG+WQESNAEKA
Sbjct: 63 DTLVKILLGAAFISFVLAYVNQDETGESGFEAYVEPLVILWILVLNAIVGVWQESNAEKA 122
Query: 141 LEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVE 200
LEALKE+Q E A V RDG +P AKELVPGDIVEL+VGDKVPADMR+ L SST+RVE
Sbjct: 123 LEALKEMQGESAKVLRDGYLVPDFPAKELVPGDIVELRVGDKVPADMRVATLKSSTLRVE 182
Query: 201 QGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259
Q SLTGES V+K+ + ++ ++Q K+ MVFAGTTVVNG+C C+V NTGM TEIGK+
Sbjct: 183 QSSLTGESMPVTKSTDFLATDDCELQAKENMVFAGTTVVNGSCICIVVNTGMCTEIGKIQ 242
Query: 260 SQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKF 319
QIH+AS E DTPLKKKL++FG LT IGV+C +VW IN KYFL+WE VD WP +F+F
Sbjct: 243 RQIHDASMEESDTPLKKKLDEFGNRLTFAIGVVCLVVWAINYKYFLSWEVVDDWPSDFRF 302
Query: 320 SFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTV 379
SFEKC YYF+IAVALAVAAIPEGLP+VITTCLALGTRKMAQKNA+VRKL SVETLGCTTV
Sbjct: 303 SFEKCAYYFKIAVALAVAAIPEGLPSVITTCLALGTRKMAQKNAIVRKLQSVETLGCTTV 362
Query: 380 ICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQT 439
ICSDKTGTLTTNQM+V++ +G + R F V+GTTY+P DG I W +MDANL
Sbjct: 363 ICSDKTGTLTTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANLLL 422
Query: 440 IAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDV----- 494
+A+I A+CNDAGV G + A+G+PTEAALKV+VEKMG P+ + V
Sbjct: 423 MAEICAICNDAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSYLI 482
Query: 495 ------LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSF 548
L CC W +R ATLEFDR RKSMGV+V +G+ +LLVKGA E+LLERS++
Sbjct: 483 DRNTVKLGCCDWWMKRSKRVATLEFDRVRKSMGVIVREPNGSNRLLVKGAFESLLERSTY 542
Query: 549 VQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLL 608
VQL DGS V LD+ R L+L EMSS LRCLG AYKDDL E Y HPAH+ L
Sbjct: 543 VQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYA-ATHPAHKKL 601
Query: 609 LNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE 668
L+P+ YSSIES LVFVG+VGLRDPPREEV +A+ DC+ AGI++MVITGDNK+TAEA+CRE
Sbjct: 602 LDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCRE 661
Query: 669 IGVFGAHEDISSQSITGKEFMDIHNQKN--YLRQDGGLLFSRAEPRHKQEIVRLLKEDGE 726
I +F E++ S TGKEFM +Q+ L QDGG +FSRAEPRHKQEIVR+LKE GE
Sbjct: 662 IQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMGE 721
Query: 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYN 786
+VAMTGDGVNDAPALKLADIG+AMGI GTEVAKEASDMVLADDNF TIV+AV EGRSIYN
Sbjct: 722 IVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYN 781
Query: 787 NMKAFIRY 794
NMKAFIRY
Sbjct: 782 NMKAFIRY 789
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O23087|ECA2_ARATH Calcium-transporting ATPase 2, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/786 (64%), Positives = 611/786 (77%), Gaps = 13/786 (1%)
Query: 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFN 80
E++F AW+ VE+C ++Y GL+ +V+ RR+ YG+NEL K +G ++ L+LEQF+
Sbjct: 4 EKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQFD 63
Query: 81 DTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKA 140
DTLV+ILL AA +SFVLA+ E G AFVEP VI LILI+NA+VG+WQESNAEKA
Sbjct: 64 DTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEKA 123
Query: 141 LEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVE 200
LEALKE+Q E A V RDG +P+L A+ELVPGDIVEL VGDKVPADMR+ L +ST+RVE
Sbjct: 124 LEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRVE 183
Query: 201 QGSLTGESEAVSKTVK-TVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259
Q SLTGE+ V K V ++ ++QGK+ MVFAGTTVVNG+C C+VT+ GM+TEIGK+
Sbjct: 184 QSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKIQ 243
Query: 260 SQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGW-PRNFK 318
QIHEAS E +TPLKKKL++FG LT I ++C LVW+IN K F++W+ VDG+ P N K
Sbjct: 244 RQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNIK 303
Query: 319 FSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTT 378
FSFEKCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTT
Sbjct: 304 FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTT 363
Query: 379 VICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQ 438
VICSDKTGTLTTNQM+ T+ +G + T R F+V GTTY+P DG I W MDANLQ
Sbjct: 364 VICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIVDWGCNNMDANLQ 423
Query: 439 TIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEG--------VNHGSSSS 490
+A+I ++CNDAGV G + A+G+PTEAALKV+VEKMG PE V + S +
Sbjct: 424 AVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEEVTNFSDNG 483
Query: 491 PEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQ 550
L CC WN ++ ATLEFDR RKSM V+V+ +G +LLVKGA E++LERSSF Q
Sbjct: 484 SSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERSSFAQ 543
Query: 551 LLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLN 610
L DGS+V LD+ SR++IL+ EM+S LRCLG AYKD+L EF Y E+HP+H+ LL+
Sbjct: 544 LADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDY-SSEEHPSHKKLLD 602
Query: 611 PTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670
P++YS+IE+ L+FVG+VGLRDPPREEV +AIEDC+ AGIRVMVITGDNK+TAEAIC EI
Sbjct: 603 PSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICCEIR 662
Query: 671 VFGAHEDISSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVV 728
+F +ED+S S TGKEFM + + L + GG +FSRAEPRHKQEIVR+LKE GE+V
Sbjct: 663 LFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMGEIV 722
Query: 729 AMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNM 788
AMTGDGVNDAPALKLADIG+AMGI GTEVAKEASDMVLADDNF TIV+AV EGRSIYNNM
Sbjct: 723 AMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNM 782
Query: 789 KAFIRY 794
KAFIRY
Sbjct: 783 KAFIRY 788
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P70083|AT2A1_MAKNI Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Makaira nigricans GN=atp2a1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/782 (49%), Positives = 506/782 (64%), Gaps = 38/782 (4%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A K EC +GVN GLS + KK + +GYNEL EG SI+ LI+EQF D LVR
Sbjct: 4 AHTKSPAECLSYFGVNEHTGLSPDQFKKNLDKFGYNELPAEEGKSIWDLIVEQFEDLLVR 63
Query: 86 ILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
ILL+AA +SFVLAW+ E GE ITAFVEP VI LILI NAIVG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+E+VPGDIVE+ VGDKVPAD+R++ + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRSDRKSVQRIKAREIVPGDIVEVSVGDKVPADIRIVSIKSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K ++VP+ + Q KK M+F+GT + G + TG++TEIGK+ Q+
Sbjct: 181 TGESVSVIKHTESVPDPRAVNQDKKNMLFSGTNIAAGKAIGVAIATGVSTEIGKIRDQM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ +E TPL+ KL++FGE L+ +I +IC VW IN+ +F + W R
Sbjct: 240 -AATEQEKTPLQAKLDEFGEQLSKVISLICVAVWAINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAGT---LRSFNVQGTTYNPSDGRIEGWPVGRMDA--NLQ 438
KTGTLTTNQM VTK+ V S G L +F++ G+ Y P G A L
Sbjct: 352 KTGTLTTNQMCVTKMFIVKSVDGDHVDLNAFDISGSKYTPEGEVSHGGSKTNCSAYDGLV 411
Query: 439 TIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLR 496
+A I A+CND+ ++ +S Y G TE AL +VEKM N + S E
Sbjct: 412 ELATICALCNDSSLDYNESKKIYEKVGEATETALCCLVEKMNVFNS-NVKNLSRIERANA 470
Query: 497 CCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGN--KKLLVKGAVENLLERSSFVQLLDG 554
CC + L ++ TLEF RDRKSM V + G+ K+ VKGA E +++R ++V++
Sbjct: 471 CCTVIKQLMKKNFTLEFSRDRKSMSVYCTPAKGDGGAKMFVKGAPEGVIDRCAYVRV-GT 529
Query: 555 SVVELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPT 612
+ V L ++ I+ +++ + LRCL A +D + E + L + T
Sbjct: 530 TRVPLTSAIKEKIMAVIRDWGTGRDTLRCLALATRDTPLKVEEMN----------LEDST 579
Query: 613 NYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672
++ E+ + FVG VG+ DPPR+EV +IE C+ AGIRV++ITGDNK TA AICR IG+F
Sbjct: 580 KFADYETDMTFVGCVGMLDPPRKEVTGSIELCRDAGIRVIMITGDNKGTAIAICRRIGIF 639
Query: 673 GAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 732
ED+S+++ TG+EF D+ +Q F+R EP HK +IV L+ + ++ AMTG
Sbjct: 640 KEDEDVSNKAYTGREFDDLPSQDQAEAVRRACCFARVEPSHKSKIVEFLQGNDDITAMTG 699
Query: 733 DGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFI 792
DGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF +IVAAV EGR+IYNNMK FI
Sbjct: 700 DGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFI 758
Query: 793 RY 794
RY
Sbjct: 759 RY 760
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Makaira nigricans (taxid: 13604) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P13585|AT2A1_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Gallus gallus GN=ATP2A1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/789 (48%), Positives = 516/789 (65%), Gaps = 49/789 (6%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A AK EEC +GVN +GLS +V++ E YG+NEL EG +I++L++EQF D LVR
Sbjct: 4 AHAKTAEECLAFFGVNESVGLSGEQVRRALEKYGHNELPAEEGKTIWELVVEQFEDLLVR 63
Query: 86 ILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
ILL+AA +SFVLAW+ E GE ITAFVEP VI LILI NA+VG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAVVGVWQERNAENAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A++LVPGDI E+ VGDKVPAD+R++ + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRADRKAVQRIKARDLVPGDIAEVAVGDKVPADIRIISIKSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K + VP+ + Q KK M+F+GT + G +V TG+NTEIGK+ ++
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIGAGKAVGIVVATGVNTEIGKIRDEM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ ++ TPL++KL++FGE L+ +I +IC VWLIN+ +F + W R
Sbjct: 240 -AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAG---TLRSFNVQGTTYNPSDGRIEG---WPVGRMDANL 437
KTGTLTTNQM+V K+ V G +L F++ G+TY P ++ G+ D L
Sbjct: 352 KTGTLTTNQMSVCKMFIVDKVEGDVCSLNEFSITGSTYAPEGDVLKNEKHIKAGQHDG-L 410
Query: 438 QTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMG-FPEGVNHGSSSSPEDV 494
+A I A+CND+ ++ ++ Y G TE AL +VEKM F V S S E
Sbjct: 411 VELATICALCNDSSLDYNEAKGIYEKVGEATETALTCLVEKMNVFNTDVR--SLSKVERA 468
Query: 495 LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNK-----KLLVKGAVENLLERSSFV 549
C + L ++ TLEF RDRKSM V + + ++ K+ VKGA E +++R ++V
Sbjct: 469 NACNSVIKQLMKKEFTLEFSRDRKSMSVYCSPAKASRAAVGNKMFVKGAPEGVIDRCNYV 528
Query: 550 QLLDGSVVELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAHQL 607
+ + + V L ++ IL ++E + LRCL A +D + E +
Sbjct: 529 R-VGTTRVPLTPAVKEKILAVIKEWGTGRDTLRCLALATRDTPPKME----------DMM 577
Query: 608 LLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR 667
L++ T ++ E+ L FVG VG+ DPPR+EV +I C+ AGIRV++ITGDNK TA AICR
Sbjct: 578 LVDSTKFAEYETDLTFVGCVGMLDPPRKEVMGSIRLCRDAGIRVIMITGDNKGTAIAICR 637
Query: 668 EIGVFGAHEDISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDG 725
IG+F E++S ++ TG+EF D+ Q+ R+ F+R EP HK +IV L+
Sbjct: 638 RIGIFTEDEEVSGRAYTGREFDDLPPAEQREACRR--ACCFARVEPTHKSKIVEFLQSFD 695
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIY 785
E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EGR+IY
Sbjct: 696 EITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIY 754
Query: 786 NNMKAFIRY 794
NNMK FIRY
Sbjct: 755 NNMKQFIRY 763
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rana esculenta GN=ATP2A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/787 (48%), Positives = 509/787 (64%), Gaps = 45/787 (5%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A K EEC +GVN GLS+ +VKK + +G NEL EG S+++L+ EQF D LVR
Sbjct: 4 AHTKTTEECLAYFGVNENTGLSLDQVKKNFDKFGPNELPAEEGKSLWELVAEQFEDLLVR 63
Query: 86 ILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
ILL+AA++SFVLAW+ E GE +TAFVEP VI LILI NA+VG+WQE NAE A+EALK
Sbjct: 64 ILLLAAIISFVLAWF---EEGEETVTAFVEPFVILLILIANAVVGVWQERNAEDAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+ELVPGDIVE+ VGDKVPAD+RL+ + S+T+R++Q L
Sbjct: 121 EYEPEMGKVYRSDRKSVQRIKARELVPGDIVEVAVGDKVPADIRLISIKSTTLRIDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K + VP+ + Q KK M+F+GT V G +V TG NTEIGK+ ++
Sbjct: 181 TGESVSVIKHTEVVPDTRAVNQDKKNMLFSGTNVGAGKAVGVVIATGPNTEIGKIRDEM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ +E TPL++KL++FGE L+ +I +IC VWLIN+ +F + W +
Sbjct: 240 -AATEQEKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPIHGGSW-------IKG 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAG---TLRSFNVQGTTYNPSDGRIE----GWPVGRMDAN 436
KTGTLTTNQM+V ++ + G +L F + G+TY P +G ++ G+ D
Sbjct: 352 KTGTLTTNQMSVCRMFVIDKVEGDVTSLNEFTITGSTYAP-EGDVQKNDKNVKAGQYDG- 409
Query: 437 LQTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDV 494
L +A I A+CND+ ++ +S + G TE AL +VEKM + S S E
Sbjct: 410 LVELATICALCNDSSLDFNESKGVFEKVGEATETALTTLVEKMNV-FNTDVKSLSKVERA 468
Query: 495 LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNK-----KLLVKGAVENLLERSSFV 549
C + L ++ TLEF RDRKSM V + ++ K+ VKGA E +++R ++V
Sbjct: 469 NACNSVIKQLMKKEFTLEFSRDRKSMSVYCIPAKASRAAVGNKMFVKGAPEGVIDRCNYV 528
Query: 550 QLLDGSVVELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAHQL 607
+ + + V L +D IL ++E + LRCL A +D + E DE
Sbjct: 529 R-VGTTRVPLTSAIKDKILSVVKEWGTGRDTLRCLALATRDTPPKREDMVLDE------- 580
Query: 608 LLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR 667
T + E+ L FVG VG+ DPPR+EV +I+ C+ AGIRV++ITGDNK TA AICR
Sbjct: 581 ---ATRFIEYETDLTFVGCVGMLDPPRKEVMGSIQLCREAGIRVIMITGDNKGTAIAICR 637
Query: 668 EIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEV 727
IG+FG +D+S ++ TG+EF D+ + F+R EP HK +IV L+ E+
Sbjct: 638 RIGIFGEDDDVSGRAFTGREFDDLPPAEQREACKRASCFARVEPAHKSKIVEFLQSFDEI 697
Query: 728 VAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNN 787
AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EGR+IYNN
Sbjct: 698 TAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNN 756
Query: 788 MKAFIRY 794
MK FIRY
Sbjct: 757 MKQFIRY 763
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Rana esculenta (taxid: 8401) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9YGL9|AT2A3_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/782 (47%), Positives = 504/782 (64%), Gaps = 45/782 (5%)
Query: 31 VEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVA 90
V++ ++GV GLS +V++ RE YG NEL E S+++L+LEQF D LVRILL+A
Sbjct: 9 VQDVLSRFGVAESCGLSPEQVRRNREKYGPNELPAEERKSLWELVLEQFEDLLVRILLMA 68
Query: 91 AVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE 150
A +SF+LAW+ E GE TAFVEP+VI +ILI NA+VG+WQE NAE A+EALKE + E
Sbjct: 69 AFLSFILAWF---EEGEESTTAFVEPIVIIMILIANAVVGVWQERNAESAIEALKEYEPE 125
Query: 151 QATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESE 209
V R D + + A+++VPGDIVE+ VGDKVPAD+R++ + S+T+RV+Q LTGES
Sbjct: 126 MGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRIIEIRSTTLRVDQSILTGESM 185
Query: 210 AVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQN 268
+V K +P+ + Q KK M+F+GT + G +V TG+ TEIGK+ +Q+ E
Sbjct: 186 SVIKHADPIPDPRAVNQDKKNMLFSGTNIAAGKAVGIVIATGVYTEIGKIRNQMVET--E 243
Query: 269 EEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYF 328
E TPL++KL++F + L+ +I ++C VW+IN+ +F + W F YYF
Sbjct: 244 PEKTPLQQKLDEFSQQLSKVIFLVCIAVWVINISHFSDPVHGGSW-------FRGAIYYF 296
Query: 329 EIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTL 388
+ +VALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSDKTGTL
Sbjct: 297 KTSVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTL 356
Query: 389 TTNQMAVTKLVAVGSRAGT---LRSFNVQGTTYNPSDGRI--EGWPV--GRMDANLQTIA 441
TTNQM+V ++ + GT L F++ G+TY P +G+I + PV G+ D L +A
Sbjct: 357 TTNQMSVCRMFIMEKVEGTQCSLHEFSITGSTYAP-EGQILKDEKPVRCGQYDG-LVELA 414
Query: 442 KISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQ 499
I A+CND+ ++ +S Y G TE AL +VEKM + + S E C
Sbjct: 415 TICALCNDSSLDYNESKKVYEKVGEATETALTCLVEKMNVFD-TDTSKLSKVERANACNS 473
Query: 500 LWNTLEQRFATLEFDRDRKSMGVLVNSS-----SGNKKLLVKGAVENLLERSSFVQLLDG 554
+ L ++ TLEF RDRKSM V + S K+ VKGA E+++ER + V+ +
Sbjct: 474 VIKHLMRKECTLEFSRDRKSMSVYCTPTGPGHNSAGSKMFVKGAPESVIERCTHVR-VGT 532
Query: 555 SVVELDQYSRDLILQSLQE--MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPT 612
+ V L R+ IL +++ M + LRCL A D + ET L + T
Sbjct: 533 AKVPLTPPVREKILSQIRDWGMGTDTLRCLALATHDAPVQRETMQ----------LHDST 582
Query: 613 NYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672
++ E+ L FVG VG+ DPPR+EV +IE C+ AGIRV++ITGDNK TA AICR IG+F
Sbjct: 583 TFTHYETNLTFVGCVGMLDPPRKEVTSSIEMCRKAGIRVIMITGDNKGTAVAICRRIGIF 642
Query: 673 GAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 732
ED++ ++ TG+EF ++ + F+R EP HK IV L+ E+ AMTG
Sbjct: 643 TESEDVAGKAYTGREFDELSPEAQRQACREARCFARVEPAHKSRIVEYLQSFNEITAMTG 702
Query: 733 DGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFI 792
DGVNDAPALK A+IG+AMG +GT VAK A++MVL+DDNF TIV+AV EGR+IYNNMK FI
Sbjct: 703 DGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLSDDNFSTIVSAVEEGRAIYNNMKQFI 761
Query: 793 RY 794
RY
Sbjct: 762 RY 763
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Transports calcium ions from the cytosol into the sarcoplasmic/endoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q0VCY0|AT2A1_BOVIN Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Bos taurus GN=ATP2A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/788 (49%), Positives = 516/788 (65%), Gaps = 48/788 (6%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A +K EEC +GV+ GL+ +VK+ E YG+NEL EG S+++L+LEQF D LVR
Sbjct: 4 AHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVLEQFEDLLVR 63
Query: 86 ILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
ILL+AA +SFVLAW+ E GE +TAFVEP VI LILI NAIVG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+++VPGDIVE+ VGDKVPAD+R+L + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K + VP+ + Q KK M+F+GT + G +V TG+ TEIGK+ Q+
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTEIGKIRDQM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ ++ TPL++KL++FGE L+ +I +IC VWLIN+ +F + W R
Sbjct: 240 -AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAG---TLRSFNVQGTTYNPSDGRIEG-WPV--GRMDANL 437
KTGTLTTNQM+V K+ + G L F+V G+TY P ++ PV G+ D L
Sbjct: 352 KTGTLTTNQMSVCKMFIIDRIDGDLCLLNEFSVTGSTYAPEGEVLKNDKPVRSGQYDG-L 410
Query: 438 QTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMG-FPEGVNHGSSSSPEDV 494
+A I A+CND+ ++ ++ Y G TE AL +VEKM F V + S E
Sbjct: 411 VELATICALCNDSSLDFNETKGIYEKVGEATETALTTLVEKMNVFNTEVRNLSKV--ERA 468
Query: 495 LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGN----KKLLVKGAVENLLERSSFVQ 550
C + L ++ TLEF RDRKSM V + + K+ VKGA E +++R ++V+
Sbjct: 469 NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKMFVKGAPEGVIDRCNYVR 528
Query: 551 LLDGSVVELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAHQLL 608
+ + V + ++ IL ++E + LRCL A +D + E +L
Sbjct: 529 -VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVL 577
Query: 609 LNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE 668
+ T + E+ L FVG+VG+ DPPR+EV +I+ C+ AGIRV++ITGDNK TA AICR
Sbjct: 578 DDSTKFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR 637
Query: 669 IGVFGAHEDISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGE 726
IG+FG +ED++ ++ TG+EF D+ Q+ R+ F+R EP HK +IV L+ E
Sbjct: 638 IGIFGENEDVADRAYTGREFDDLPLAEQREACRR--ACCFARVEPTHKSKIVEYLQSFDE 695
Query: 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYN 786
+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EGR+IYN
Sbjct: 696 ITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYN 754
Query: 787 NMKAFIRY 794
NMK FIRY
Sbjct: 755 NMKQFIRY 762
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P04191|AT2A1_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Oryctolagus cuniculus GN=ATP2A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/789 (48%), Positives = 520/789 (65%), Gaps = 49/789 (6%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A +K EEC +GV+ GL+ +VK+ E YG+NEL EG S+++L++EQF D LVR
Sbjct: 4 AHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVR 63
Query: 86 ILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
ILL+AA +SFVLAW+ E GE ITAFVEP VI LILI NAIVG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+++VPGDIVE+ VGDKVPAD+R+L + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K + VP+ + Q KK M+F+GT + G +V TG++TEIGK+ Q+
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ ++ TPL++KL++FGE L+ +I +IC VWLIN+ +F + W R
Sbjct: 240 -AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAG---TLRSFNVQGTTYNPSDGRIEG-WPV--GRMDANL 437
KTGTLTTNQM+V K+ + G +L F++ G+TY P ++ P+ G+ D L
Sbjct: 352 KTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDG-L 410
Query: 438 QTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMG-FPEGVNHGSSSSPEDV 494
+A I A+CND+ ++ ++ Y G TE AL +VEKM F V + S E
Sbjct: 411 VELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKV--ERA 468
Query: 495 LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNK-----KLLVKGAVENLLERSSFV 549
C + L ++ TLEF RDRKSM V + + ++ K+ VKGA E +++R ++V
Sbjct: 469 NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYV 528
Query: 550 QLLDGSVVELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAHQL 607
+ + + V + ++ IL ++E + LRCL A +D + E +
Sbjct: 529 R-VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMV 577
Query: 608 LLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR 667
L + + + E+ L FVG+VG+ DPPR+EV +I+ C+ AGIRV++ITGDNK TA AICR
Sbjct: 578 LDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR 637
Query: 668 EIGVFGAHEDISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDG 725
IG+FG +E+++ ++ TG+EF D+ Q+ R+ F+R EP HK +IV L+
Sbjct: 638 RIGIFGENEEVADRAYTGREFDDLPLAEQREACRR--ACCFARVEPSHKSKIVEYLQSYD 695
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIY 785
E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EGR+IY
Sbjct: 696 EITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIY 754
Query: 786 NNMKAFIRY 794
NNMK FIRY
Sbjct: 755 NNMKQFIRY 763
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Oryctolagus cuniculus (taxid: 9986) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 817 | ||||||
| 224106565 | 1064 | endoplasmic reticulum [ER]-type calcium | 0.971 | 0.746 | 0.838 | 0.0 | |
| 147858184 | 1061 | hypothetical protein VITISV_034639 [Viti | 0.969 | 0.746 | 0.837 | 0.0 | |
| 225435122 | 1061 | PREDICTED: calcium-transporting ATPase 4 | 0.969 | 0.746 | 0.837 | 0.0 | |
| 15223017 | 1061 | Ca2+-transporting ATPase [Arabidopsis th | 0.969 | 0.746 | 0.823 | 0.0 | |
| 297849064 | 1056 | endoplasmic reticulum-type calcium-trans | 0.963 | 0.745 | 0.822 | 0.0 | |
| 186478235 | 1061 | Ca2+-transporting ATPase [Arabidopsis th | 0.969 | 0.746 | 0.821 | 0.0 | |
| 116248597 | 1061 | endomembrane Ca2+ ATPase 4 [Arabidopsis | 0.969 | 0.746 | 0.817 | 0.0 | |
| 297843570 | 1061 | calcium-transporting ATPase 1, endoplasm | 0.969 | 0.746 | 0.818 | 0.0 | |
| 449470386 | 1065 | PREDICTED: calcium-transporting ATPase 4 | 0.970 | 0.744 | 0.805 | 0.0 | |
| 225439821 | 1063 | PREDICTED: calcium-transporting ATPase 4 | 0.971 | 0.746 | 0.811 | 0.0 |
| >gi|224106565|ref|XP_002314209.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] gi|222850617|gb|EEE88164.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1357 bits (3513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 667/795 (83%), Positives = 727/795 (91%), Gaps = 1/795 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNE-ETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYG 59
MGKG ++ G+R ES N+ + FPAWAK+V+ECEEKY VN + GLS +V+KR +IYG
Sbjct: 1 MGKGGEDYGERDQNGIESQNQGDIFPAWAKEVKECEEKYAVNREFGLSSADVEKRLKIYG 60
Query: 60 YNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVI 119
YNELEKHEG SIF+LIL+QFNDTLVRILL AA+VSFVLAWYDGEEGGEM ITAFVEPLVI
Sbjct: 61 YNELEKHEGVSIFKLILDQFNDTLVRILLAAAIVSFVLAWYDGEEGGEMGITAFVEPLVI 120
Query: 120 FLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKV 179
FLILIVN IVGIWQESNAEKALEALKEIQSE ATV RD KK SL AKELVPGDIVEL+V
Sbjct: 121 FLILIVNGIVGIWQESNAEKALEALKEIQSEHATVIRDRKKFSSLPAKELVPGDIVELRV 180
Query: 180 GDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVN 239
GDKVPADMR+L L SST+RVEQGSLTGESEAVSKT K V E++DIQGKKCMVFAGTTVVN
Sbjct: 181 GDKVPADMRVLNLISSTLRVEQGSLTGESEAVSKTAKPVAESTDIQGKKCMVFAGTTVVN 240
Query: 240 GTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLI 299
G C CLVT TGMNTEIGKVHSQIHEA+QNEEDTPLKKKLN+FGEVLTM+IG+ICALVWLI
Sbjct: 241 GNCICLVTETGMNTEIGKVHSQIHEAAQNEEDTPLKKKLNEFGEVLTMLIGIICALVWLI 300
Query: 300 NVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMA 359
N+KYFLTWEYVDGWP+NFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMA
Sbjct: 301 NLKYFLTWEYVDGWPKNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMA 360
Query: 360 QKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYN 419
QKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GTTY+
Sbjct: 361 QKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRVGTLRSFNVEGTTYS 420
Query: 420 PSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGF 479
P DG+IE WPVGRMD+NLQ IAKI+AVCNDAGVEQSGNHYVA GMPTEAALKVMVEKMGF
Sbjct: 421 PFDGKIEDWPVGRMDSNLQMIAKIAAVCNDAGVEQSGNHYVAGGMPTEAALKVMVEKMGF 480
Query: 480 PEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAV 539
P G++ SS EDVL CC+LWNT+EQR ATLEFDRDRKSMGV+VNSSSG K LLVKGAV
Sbjct: 481 PGGLSKESSLVHEDVLACCRLWNTMEQRIATLEFDRDRKSMGVIVNSSSGKKSLLVKGAV 540
Query: 540 ENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGD 599
ENLL+RS+ +QLLDGSVV LD+ S+DLILQ+L+EMS++ALRCLGFAYK+DL EF TY GD
Sbjct: 541 ENLLDRSTSIQLLDGSVVALDRCSKDLILQNLREMSTSALRCLGFAYKEDLSEFRTYSGD 600
Query: 600 EDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNK 659
EDHPAHQLLL+ NYSSIES L FVG+ GLRDPPR+EVRQAIEDCKAAGIRVMVITGDNK
Sbjct: 601 EDHPAHQLLLDLHNYSSIESNLTFVGLAGLRDPPRKEVRQAIEDCKAAGIRVMVITGDNK 660
Query: 660 NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVR 719
NTAEAIC EIGVFG ++DISS+S+TG+EFM + ++K +LRQ GGLLFSRAEPRHKQEIVR
Sbjct: 661 NTAEAICHEIGVFGPYDDISSKSLTGREFMGLRDKKTHLRQSGGLLFSRAEPRHKQEIVR 720
Query: 720 LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779
LLKEDGEVVAMTGDGVNDAPALKLADIG+AMGIAGTEVAKEASDMVLADDNF TIV AVG
Sbjct: 721 LLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVVAVG 780
Query: 780 EGRSIYNNMKAFIRY 794
EGRSIYNNMKAFIRY
Sbjct: 781 EGRSIYNNMKAFIRY 795
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|147858184|emb|CAN79679.1| hypothetical protein VITISV_034639 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1349 bits (3492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/794 (83%), Positives = 723/794 (91%), Gaps = 2/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKG Q GKR D ++ E F AWAK+V+ECEEK VN + GLS EV+KRREIYGY
Sbjct: 1 MGKGGQGYGKRNPND--ANTVEIFAAWAKNVKECEEKLQVNHEFGLSTAEVEKRREIYGY 58
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEKHEG SI +LIL+QFNDTLVRILLVAAV+SFVLAWYDGEEGGEMEITAFVEPLVIF
Sbjct: 59 NELEKHEGPSILRLILDQFNDTLVRILLVAAVISFVLAWYDGEEGGEMEITAFVEPLVIF 118
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVG+WQESNAEKALEALKEIQSE ATV RDGKK+P+L AKELVPGDIVEL+VG
Sbjct: 119 LILIVNAIVGVWQESNAEKALEALKEIQSEHATVIRDGKKVPNLPAKELVPGDIVELRVG 178
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR+L L SST+RVEQGSLTGESEAV+KT K VPE+SDIQGKKCMVFAGTTVVNG
Sbjct: 179 DKVPADMRVLSLISSTLRVEQGSLTGESEAVNKTTKVVPEDSDIQGKKCMVFAGTTVVNG 238
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
CLVT TGMNTEIGKVH QIHEASQ+EEDTPLKKKLN+FGE+LT IIGVICALVWLIN
Sbjct: 239 NGICLVTETGMNTEIGKVHLQIHEASQSEEDTPLKKKLNEFGELLTAIIGVICALVWLIN 298
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 299 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 358
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV KLVA+G R T+R+FNV+GT+Y+P
Sbjct: 359 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVAMGPRVYTVRNFNVEGTSYSP 418
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DGRI WP GRMDANLQ IAKI+AVCNDA VE SG H+VA+GMPTEAALKV+VEKMG P
Sbjct: 419 FDGRILDWPAGRMDANLQMIAKIAAVCNDADVEDSGQHFVANGMPTEAALKVLVEKMGLP 478
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG ++GSS VLRC QLWN +E R ATLEFDRDRKSMGV+VNSSSG K LLVKGAVE
Sbjct: 479 EGFDNGSSLDNSAVLRCSQLWNKIEHRIATLEFDRDRKSMGVIVNSSSGKKALLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERSS++QLLDGS+VELD+ SRDLILQSL +MS++ALRCLGFAYK+DL EF TY+GDE
Sbjct: 539 NVLERSSYIQLLDGSIVELDRKSRDLILQSLYQMSTSALRCLGFAYKEDLLEFATYNGDE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQLLL P+NYS IES+L+FVG+VGLRDPPR+EVRQAIEDC+AAGIRVMVITGDNKN
Sbjct: 599 DHPAHQLLLRPSNYSVIESKLIFVGLVGLRDPPRKEVRQAIEDCRAAGIRVMVITGDNKN 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVFG+ EDIS +SITGKEFM+ ++QK +LRQ+GGLLFSRAEPRHKQEIVRL
Sbjct: 659 TAEAICREIGVFGSKEDISLKSITGKEFMEHYDQKTHLRQNGGLLFSRAEPRHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKED EVVAMTGDGVNDAPALKLADIG+AMGI GTEVAKEASDMVLADDNF TIVAAVGE
Sbjct: 719 LKEDNEVVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFNTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225435122|ref|XP_002284552.1| PREDICTED: calcium-transporting ATPase 4, endoplasmic reticulum-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1349 bits (3491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/794 (83%), Positives = 723/794 (91%), Gaps = 2/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKG Q GKR D ++ E F AWAK+V+ECEEK VN + GLS EV+KRREIYGY
Sbjct: 1 MGKGGQGYGKRNPND--ANTVEIFAAWAKNVKECEEKLQVNHEFGLSTAEVEKRREIYGY 58
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEKHEG SI +LIL+QFNDTLVRILLVAAV+SFVLAWYDGEEGGEMEITAFVEPLVIF
Sbjct: 59 NELEKHEGPSILRLILDQFNDTLVRILLVAAVISFVLAWYDGEEGGEMEITAFVEPLVIF 118
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVG+WQESNAEKALEALKEIQSE ATV RDGKK+P+L AKELVPGDIVEL+VG
Sbjct: 119 LILIVNAIVGVWQESNAEKALEALKEIQSEHATVIRDGKKVPNLPAKELVPGDIVELRVG 178
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR+L L SST+RVEQGSLTGESEAV+KT K VPE+SDIQGKKCMVFAGTTVVNG
Sbjct: 179 DKVPADMRVLSLISSTLRVEQGSLTGESEAVNKTTKVVPEDSDIQGKKCMVFAGTTVVNG 238
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
CLVT TGMNTEIGKVH QIHEASQ+EEDTPLKKKLN+FGE+LT IIGVICALVWLIN
Sbjct: 239 NGICLVTETGMNTEIGKVHLQIHEASQSEEDTPLKKKLNEFGELLTAIIGVICALVWLIN 298
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 299 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 358
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV KLVA+G R T+R+FNV+GT+Y+P
Sbjct: 359 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVAMGPRVYTVRNFNVEGTSYSP 418
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DGRI WP GRMDANLQ IAKI+AVCNDA VE SG H+VA+GMPTEAALKV+VEKMG P
Sbjct: 419 FDGRILDWPAGRMDANLQMIAKIAAVCNDADVEYSGQHFVANGMPTEAALKVLVEKMGLP 478
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG ++GSS VLRC QLWN +E R ATLEFDRDRKSMGV+VNSSSG K LLVKGAVE
Sbjct: 479 EGFDNGSSLDNSAVLRCSQLWNKIEHRIATLEFDRDRKSMGVIVNSSSGKKALLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERSS++QLLDGS+VELD+ SRDLILQSL +MS++ALRCLGFAYK+DL EF TY+GDE
Sbjct: 539 NVLERSSYIQLLDGSIVELDRKSRDLILQSLYQMSTSALRCLGFAYKEDLLEFATYNGDE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQLLL P+NYS IES+L+FVG+VGLRDPPR+EVRQAIEDC+AAGIRVMVITGDNKN
Sbjct: 599 DHPAHQLLLRPSNYSVIESKLIFVGLVGLRDPPRKEVRQAIEDCRAAGIRVMVITGDNKN 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVFG+ EDIS +SITGKEFM+ ++QK +LRQ+GGLLFSRAEPRHKQEIVRL
Sbjct: 659 TAEAICREIGVFGSKEDISLKSITGKEFMEHYDQKTHLRQNGGLLFSRAEPRHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKED EVVAMTGDGVNDAPALKLADIG+AMGI GTEVAKEASDMVLADDNF TIVAAVGE
Sbjct: 719 LKEDNEVVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFNTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15223017|ref|NP_172259.1| Ca2+-transporting ATPase [Arabidopsis thaliana] gi|12643704|sp|P92939.2|ECA1_ARATH RecName: Full=Calcium-transporting ATPase 1, endoplasmic reticulum-type gi|8439887|gb|AAF75073.1|AC007583_9 Strong similarity to ER-type calcium pump protein from Arabidopsis thaliana gb|U93845. ESTs gb|AA042787 and gb|AI992578 come from this gene [Arabidopsis thaliana] gi|1943751|gb|AAB52420.1| ER-type calcium pump [Arabidopsis thaliana] gi|2078292|gb|AAC68819.1| ER-type Ca2+-pumping ATPase [Arabidopsis thaliana] gi|7106179|gb|AAF36087.1| endoplasmic reticulum-type calcium-transporting ATPase 1 [Arabidopsis thaliana] gi|332190065|gb|AEE28186.1| Ca2+-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1329 bits (3440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/794 (82%), Positives = 721/794 (90%), Gaps = 2/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKGS++ K+ + + N +TFPAWAKDV ECEE + V+ + GLS EV KR +IYG
Sbjct: 1 MGKGSEDLVKKESLNSTPVNSDTFPAWAKDVAECEEHFVVSREKGLSSDEVLKRHQIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRILL AAV+SFVLA++DG+EGGEM ITAFVEPLVIF
Sbjct: 61 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ SL AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 241 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP+GRMDANLQ IAKI+A+CNDA VEQS +V+ GMPTEAALKV+VEKMGFP
Sbjct: 421 RDGKIEDWPMGRMDANLQMIAKIAAICNDANVEQSDQQFVSRGMPTEAALKVLVEKMGFP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG+N SS DVLRCC+LW+ LEQR ATLEFDRDRKSMGV+V+SSSGNK LLVKGAVE
Sbjct: 481 EGLNEASSDG--DVLRCCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGNKLLLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLDGS ELDQYSRDLILQSL++MS +ALRCLGFAY D +F TYDG E
Sbjct: 539 NVLERSTHIQLLDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NYSSIES L+FVG VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 599 DHPAHQQLLNPSNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TG EFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 659 TAEAICREIGVFEADEDISSRSLTGIEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASDMVLADDNF TIVAAVGE
Sbjct: 719 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297849064|ref|XP_002892413.1| endoplasmic reticulum-type calcium-transporting ATPase 4 [Arabidopsis lyrata subsp. lyrata] gi|297338255|gb|EFH68672.1| endoplasmic reticulum-type calcium-transporting ATPase 4 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1327 bits (3434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/794 (82%), Positives = 721/794 (90%), Gaps = 7/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKG ++ G +K++++ +TFPAWAKDV ECEEK+GV+ + GL EV KR +IYG
Sbjct: 1 MGKGGEDCG-----NKQTNSSDTFPAWAKDVAECEEKFGVSREKGLGTDEVLKRHQIYGL 55
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRILL AAV+SFVLA++DG+EGGEM ITAFVEPLVIF
Sbjct: 56 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 115
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ SL AKELVPGDIVEL+VG
Sbjct: 116 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVG 175
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 176 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 235
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 236 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 295
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 296 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 355
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 356 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 415
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP GRMDANLQ IAKI+A+CNDA VEQS +V+ GMPTEAALKV+VEKMGFP
Sbjct: 416 RDGKIEDWPTGRMDANLQMIAKIAAICNDASVEQSEQQFVSRGMPTEAALKVLVEKMGFP 475
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
+G+N SS DVLRCC+LW+ LEQR ATLEFDRDRKSMGV+V+SSSG K LLVKGAVE
Sbjct: 476 QGLNETSSDG--DVLRCCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVE 533
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLDGS+ ELDQYSRDLILQSL +MS +ALRCLGFAY D +F TYDG E
Sbjct: 534 NVLERSTRIQLLDGSIRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSE 593
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NYSSIES LVF G VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 594 DHPAHQQLLNPSNYSSIESNLVFTGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 653
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TGKEFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 654 TAEAICREIGVFEADEDISSRSLTGKEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRL 713
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASDMVLADDNF TIVAAVGE
Sbjct: 714 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGE 773
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 774 GRSIYNNMKAFIRY 787
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186478235|ref|NP_172246.3| Ca2+-transporting ATPase [Arabidopsis thaliana] gi|12643934|sp|Q9XES1.2|ECA4_ARATH RecName: Full=Calcium-transporting ATPase 4, endoplasmic reticulum-type gi|8439902|gb|AAF75088.1|AC007583_24 Strong similarity to ER-type calcium pump protein from Arabidopsis thaliana gb|U93845. It is a member of Na+/K+ ATPase C-terminus PF|00690 and a member of E1-E2 ATPase PF|00122 [Arabidopsis thaliana] gi|332190039|gb|AEE28160.1| Ca2+-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1326 bits (3431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/794 (82%), Positives = 717/794 (90%), Gaps = 2/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKG ++ G + E +TFPAW KDV ECEEK+GV+ + GLS EV KR +IYG
Sbjct: 1 MGKGGEDCGNKQTNSSELVKSDTFPAWGKDVSECEEKFGVSREKGLSTDEVLKRHQIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRILL AAV+SFVLA++DG+EGGEM ITAFVEPLVIF
Sbjct: 61 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ SL AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 241 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP GRMDANLQ IAKI+A+CNDA VE+S +V+ GMPTEAALKV+VEKMGFP
Sbjct: 421 RDGKIEDWPTGRMDANLQMIAKIAAICNDANVEKSDQQFVSRGMPTEAALKVLVEKMGFP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG+N SS +VLRCC+LW+ LEQR ATLEFDRDRKSMGV+V+SSSG K LLVKGAVE
Sbjct: 481 EGLNEASSDG--NVLRCCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLDGS ELDQYSRDLILQSL +MS +ALRCLGFAY D +F TYDG E
Sbjct: 539 NVLERSTHIQLLDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NYSSIES LVFVG VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 599 DHPAHQQLLNPSNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TGKEFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 659 TAEAICREIGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASD+VLADDNF TIVAAVGE
Sbjct: 719 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116248597|gb|ABJ90443.1| endomembrane Ca2+ ATPase 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1321 bits (3420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/794 (81%), Positives = 715/794 (90%), Gaps = 2/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKG ++ G + E +TFPAW KDV ECEEK+GV+ + GLS EV KR +IYG
Sbjct: 1 MGKGGEDCGNKQTNSSELVKSDTFPAWGKDVSECEEKFGVSREKGLSTDEVLKRHQIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRILL AAV+SFVLA++DG+EGGEM ITAFVEPLVIF
Sbjct: 61 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ S AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSFPAKELVPGDIVELRVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 241 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP GRMDANLQ IAKI+A+CNDA VE+S +V+ GMPTEAALKV+VEKMGFP
Sbjct: 421 RDGKIEDWPTGRMDANLQMIAKIAAICNDANVEKSDQQFVSRGMPTEAALKVLVEKMGFP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG+N SS +VLRCC+LW+ LEQR ATLEFDRDRKSMGV+V+SSSG K LLVKGAV+
Sbjct: 481 EGLNEASSDG--NVLRCCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVK 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLDGS ELDQYSRDLILQSL +MS +ALRCLGFAY D +F TYDG E
Sbjct: 539 NVLERSTHIQLLDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NYSSIES LVFVG VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 599 DHPAHQQLLNPSNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TGKEFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 659 TAEAICREIGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKL DIGVAMGI+GTEVAKEASD+VLADDNF TIVAAVGE
Sbjct: 719 LKEDGEVVAMTGDGVNDAPALKLVDIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297843570|ref|XP_002889666.1| calcium-transporting ATPase 1, endoplasmic reticulum-type [Arabidopsis lyrata subsp. lyrata] gi|297335508|gb|EFH65925.1| calcium-transporting ATPase 1, endoplasmic reticulum-type [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1320 bits (3417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/794 (81%), Positives = 718/794 (90%), Gaps = 2/794 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKGS++ ++ + + N +TFPAWAKDV ECEE +GV+ + GLS EV KR +IYG
Sbjct: 1 MGKGSEDLVEKESLNSTPVNSDTFPAWAKDVAECEEHFGVSREKGLSTDEVLKRHQIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRILL AAV+SFVLA++DG+EGGEM ITAFVEPLVIF
Sbjct: 61 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ SL AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 241 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP GRMDANLQ IAKI+A+CNDAGVEQS +V+ GMPTEAALKV+VEKMGFP
Sbjct: 421 RDGKIEDWPTGRMDANLQMIAKIAAICNDAGVEQSEQQFVSRGMPTEAALKVLVEKMGFP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG+N S+ +DVL C +LW+ LEQR ATLEFDRDRKSMGV+V+SSSG K LLVKGAVE
Sbjct: 481 EGLNKVPSN--DDVLSCSRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLD SV ELDQYSRDLILQSL++MS +ALRCLGFAY D +F TYDG E
Sbjct: 539 NVLERSTRIQLLDDSVQELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFTTYDGSE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NY SIES L F G VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 599 DHPAHQQLLNPSNYFSIESNLTFAGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TGKEFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 659 TAEAICREIGVFEADEDISSRSLTGKEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASDMVLADDNF TIVAAVGE
Sbjct: 719 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449470386|ref|XP_004152898.1| PREDICTED: calcium-transporting ATPase 4, endoplasmic reticulum-type-like [Cucumis sativus] gi|449512811|ref|XP_004164146.1| PREDICTED: calcium-transporting ATPase 4, endoplasmic reticulum-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1302 bits (3370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/797 (80%), Positives = 715/797 (89%), Gaps = 4/797 (0%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MG+G +N GK+ F SS +ET+PAWA+DV+EC E Y VNP +GLS EV+ +R+IYGY
Sbjct: 1 MGRGGENYGKKEVFATTSSKKETYPAWARDVQECLEIYQVNPDLGLSTEEVENKRKIYGY 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEKHEGTSIF+LILEQFNDTLVRILL AAVVSFVLAWYDGEEGGEMEITAFVEPLVIF
Sbjct: 61 NELEKHEGTSIFKLILEQFNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQSEQA+V R+GK+ S+ AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQENNAEKALEALKEIQSEQASVLRNGKRT-SILAKELVPGDIVELRVG 179
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPAD+R+LRL SST RVEQGSLTGESEAVSKT K VPE+SDIQGKKCM FAGTTVVNG
Sbjct: 180 DKVPADVRVLRLISSTFRVEQGSLTGESEAVSKTSKAVPEDSDIQGKKCMAFAGTTVVNG 239
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C C+VT TGM+TE+G+VH QI EA+Q+E+DTPLKKKLN+FGE+LT IIGVICALVWLIN
Sbjct: 240 NCICIVTQTGMSTELGQVHCQIQEAAQSEDDTPLKKKLNEFGELLTAIIGVICALVWLIN 299
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFLTWEYVDGWP NFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 300 VKYFLTWEYVDGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 359
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV K+VA+GSR GTLR+F+V+GTTY+P
Sbjct: 360 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKIVALGSRVGTLRAFDVEGTTYDP 419
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+I GW G++DANLQ + KI+AVCNDAGVE+SG+H+VA+GMPTEAALKV+VEKMG P
Sbjct: 420 LDGKIIGWLGGQLDANLQMLGKIAAVCNDAGVEKSGHHFVANGMPTEAALKVLVEKMGLP 479
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG + S + DVLRCCQ WN EQR ATLEFDRDRKSMGV+ NS SG K LLVKGAVE
Sbjct: 480 EGYDSSSVETNGDVLRCCQAWNKNEQRIATLEFDRDRKSMGVITNSKSGKKSLLVKGAVE 539
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYD-GD 599
NLL+RSSF+QLLDG++V LD S+ IL L+EMSS+ALRCLGFAYK+ L EF Y GD
Sbjct: 540 NLLDRSSFIQLLDGTIVNLDSDSKRCILDCLREMSSSALRCLGFAYKEYLPEFSDYTIGD 599
Query: 600 EDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNK 659
EDHPAHQLLL+P+ YS+IES L+F G VGLRDPPR+EV QAI+DCKAAGIRVMVITGDN+
Sbjct: 600 EDHPAHQLLLDPSKYSTIESNLIFAGFVGLRDPPRKEVHQAIQDCKAAGIRVMVITGDNQ 659
Query: 660 NTAEAICREIGVFGAHEDISSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPRHKQEI 717
NTAEAICREIGVFG HE I+S+S+TGKEFM + +QK +LRQDGGLLFSRAEP+HKQEI
Sbjct: 660 NTAEAICREIGVFGQHEAINSRSLTGKEFMTMSREDQKFHLRQDGGLLFSRAEPKHKQEI 719
Query: 718 VRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAA 777
VRLLKEDGEVVAMTGDGVNDAPALKLADIG+AMGIAGTEVAKEASDMVLADDNF TIVAA
Sbjct: 720 VRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAA 779
Query: 778 VGEGRSIYNNMKAFIRY 794
VGEGRSIY+NMKAFIRY
Sbjct: 780 VGEGRSIYDNMKAFIRY 796
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225439821|ref|XP_002277306.1| PREDICTED: calcium-transporting ATPase 4, endoplasmic reticulum-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1299 bits (3362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/794 (81%), Positives = 704/794 (88%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKG ++ GKR + S E FPAW ++V+ECE+ YGV+ + GLS +V+KRR+IYG
Sbjct: 1 MGKGGEDYGKREVSSSKVSGPEVFPAWGREVQECEKHYGVSRRSGLSSSDVEKRRKIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
NELEKHEG SI+ LILEQF DTLVRILLVAAV+SFVLAWYDGEEGGE EITAFVEPLVIF
Sbjct: 61 NELEKHEGPSIWSLILEQFQDTLVRILLVAAVISFVLAWYDGEEGGETEITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILI NAIVG+WQE+NAEKALEALKEIQSEQA V R+ ++IP+L AKELVPGDIVELKVG
Sbjct: 121 LILIANAIVGVWQENNAEKALEALKEIQSEQAAVIRNNQRIPNLPAKELVPGDIVELKVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+R+EQGSLTGESEAV+KT K VPE++DIQGK+CMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVELISSTLRLEQGSLTGESEAVNKTNKPVPEDADIQGKRCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT TGM TEIGKVH+QIH ASQ+EEDTPLKKKLN+FGE LT+IIGVICALVWLIN
Sbjct: 241 NCICLVTQTGMETEIGKVHTQIHVASQSEEDTPLKKKLNEFGESLTVIIGVICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL WEYVDGWP NFKFSFEKCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLNWEYVDGWPSNFKFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV KLVA+GSRAG LR F V GTTY+P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVAMGSRAGALRKFRVDGTTYSP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+I WP GRMDANLQ IAKISAVCNDAGV QS + YVA+GMPTEAALKV+VEKMG P
Sbjct: 421 FDGKIHDWPCGRMDANLQMIAKISAVCNDAGVAQSEHKYVANGMPTEAALKVLVEKMGPP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
+ S SS D+LRCCQ WN E+R ATLEFDRDRKSMGV+VNS SG K LLVKGAVE
Sbjct: 481 AVDDDKSFSSSGDLLRCCQRWNENERRIATLEFDRDRKSMGVIVNSHSGKKSLLVKGAVE 540
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
NLLERS+ VQLLDGSVVEL SR LIL++L EMSS ALRCLGFAYKD+L +F TYDGDE
Sbjct: 541 NLLERSNSVQLLDGSVVELGDNSRSLILEALHEMSSGALRCLGFAYKDELPDFATYDGDE 600
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
+HPAH LLLNP NYSSIE L FVG+VGLRDPPR EV QAIEDC+AAGIRVMVITGDNKN
Sbjct: 601 NHPAHGLLLNPANYSSIERNLTFVGLVGLRDPPRAEVHQAIEDCRAAGIRVMVITGDNKN 660
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAIC EIGVFG +EDI S+S+TGKEFM++ +QK +LRQ+GGLLFSRAEPRHKQEIVRL
Sbjct: 661 TAEAICHEIGVFGPNEDIRSKSLTGKEFMELRDQKAHLRQNGGLLFSRAEPRHKQEIVRL 720
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIG+AMGIAGTEVAKEASDMVLADDNF TIVAAVGE
Sbjct: 721 LKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGE 780
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 781 GRSIYNNMKAFIRY 794
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 817 | ||||||
| TAIR|locus:2026580 | 1061 | ECA1 "ER-type Ca2+-ATPase 1" [ | 0.969 | 0.746 | 0.811 | 0.0 | |
| TAIR|locus:2026555 | 1061 | ECA4 "endomembrane-type CA-ATP | 0.969 | 0.746 | 0.808 | 0.0 | |
| UNIPROTKB|Q42883 | 1048 | LCA1 "Calcium-transporting ATP | 0.946 | 0.737 | 0.634 | 1e-258 | |
| TAIR|locus:2134623 | 1054 | ECA2 "ER-type Ca2+-ATPase 2" [ | 0.946 | 0.733 | 0.631 | 1.7e-258 | |
| ZFIN|ZDB-GENE-020905-1 | 1005 | atp2a1 "ATPase, Ca++ transport | 0.902 | 0.733 | 0.484 | 1.3e-173 | |
| ZFIN|ZDB-GENE-041229-2 | 991 | atp2a1l "ATPase, Ca++ transpor | 0.903 | 0.744 | 0.484 | 4.9e-172 | |
| UNIPROTKB|F1RFH9 | 993 | ATP2A1 "Uncharacterized protei | 0.902 | 0.742 | 0.485 | 1.7e-171 | |
| UNIPROTKB|P70083 | 996 | atp2a1 "Sarcoplasmic/endoplasm | 0.906 | 0.743 | 0.482 | 2.7e-171 | |
| ZFIN|ZDB-GENE-040426-702 | 1042 | atp2a2a "ATPase, Ca++ transpor | 0.902 | 0.707 | 0.483 | 7.2e-171 | |
| UNIPROTKB|Q0VCY0 | 993 | ATP2A1 "Sarcoplasmic/endoplasm | 0.902 | 0.742 | 0.484 | 1.2e-170 |
| TAIR|locus:2026580 ECA1 "ER-type Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3296 (1165.3 bits), Expect = 0., P = 0.
Identities = 644/794 (81%), Positives = 710/794 (89%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKGS++ K+ + + N +TFPAWAKDV ECEE + V+ + GLS EV KR +IYG
Sbjct: 1 MGKGSEDLVKKESLNSTPVNSDTFPAWAKDVAECEEHFVVSREKGLSSDEVLKRHQIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRIXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRI ++DG+EGGEM ITAFVEPLVIF
Sbjct: 61 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ SL AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 241 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP+GRMDANLQ IAKI+A+CNDA VEQS +V+ GMPTEAALKV+VEKMGFP
Sbjct: 421 RDGKIEDWPMGRMDANLQMIAKIAAICNDANVEQSDQQFVSRGMPTEAALKVLVEKMGFP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG+N SS DVLRCC+LW+ LEQR ATLEFDRDRKSMGV+V+SSSGNK LLVKGAVE
Sbjct: 481 EGLNEASSDG--DVLRCCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGNKLLLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLDGS ELDQYSRDLILQSL++MS +ALRCLGFAY D +F TYDG E
Sbjct: 539 NVLERSTHIQLLDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NYSSIES L+FVG VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 599 DHPAHQQLLNPSNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TG EFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 659 TAEAICREIGVFEADEDISSRSLTGIEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASDMVLADDNF TIVAAVGE
Sbjct: 719 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
|
| TAIR|locus:2026555 ECA4 "endomembrane-type CA-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3294 (1164.6 bits), Expect = 0., P = 0.
Identities = 642/794 (80%), Positives = 706/794 (88%)
Query: 1 MGKGSQNTGKRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
MGKG ++ G + E +TFPAW KDV ECEEK+GV+ + GLS EV KR +IYG
Sbjct: 1 MGKGGEDCGNKQTNSSELVKSDTFPAWGKDVSECEEKFGVSREKGLSTDEVLKRHQIYGL 60
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRIXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIF 120
NELEK EGTSIF+LILEQFNDTLVRI ++DG+EGGEM ITAFVEPLVIF
Sbjct: 61 NELEKPEGTSIFKLILEQFNDTLVRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIF 120
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
LILIVNAIVGIWQE+NAEKALEALKEIQS+QATV RDG K+ SL AKELVPGDIVEL+VG
Sbjct: 121 LILIVNAIVGIWQETNAEKALEALKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVG 180
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
DKVPADMR++ L SST+RVEQGSLTGESEAVSKT K V EN+DIQGKKCMVFAGTTVVNG
Sbjct: 181 DKVPADMRVVALISSTLRVEQGSLTGESEAVSKTTKHVDENADIQGKKCMVFAGTTVVNG 240
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
C CLVT+TGMNTEIG+VHSQI EA+Q+EEDTPLKKKLN+FGEVLTMIIG+ICALVWLIN
Sbjct: 241 NCICLVTDTGMNTEIGRVHSQIQEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLIN 300
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
VKYFL+WEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ
Sbjct: 301 VKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV+KLVA+GSR GTLRSFNV+GT+++P
Sbjct: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDP 420
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFP 480
DG+IE WP GRMDANLQ IAKI+A+CNDA VE+S +V+ GMPTEAALKV+VEKMGFP
Sbjct: 421 RDGKIEDWPTGRMDANLQMIAKIAAICNDANVEKSDQQFVSRGMPTEAALKVLVEKMGFP 480
Query: 481 EGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540
EG+N SS +VLRCC+LW+ LEQR ATLEFDRDRKSMGV+V+SSSG K LLVKGAVE
Sbjct: 481 EGLNEASSDG--NVLRCCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVE 538
Query: 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDE 600
N+LERS+ +QLLDGS ELDQYSRDLILQSL +MS +ALRCLGFAY D +F TYDG E
Sbjct: 539 NVLERSTHIQLLDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSE 598
Query: 601 DHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660
DHPAHQ LLNP+NYSSIES LVFVG VGLRDPPR+EVRQAI DC+ AGIRVMVITGDNK+
Sbjct: 599 DHPAHQQLLNPSNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKS 658
Query: 661 TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRL 720
TAEAICREIGVF A EDISS+S+TGKEFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRL
Sbjct: 659 TAEAICREIGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRL 718
Query: 721 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780
LKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASD+VLADDNF TIVAAVGE
Sbjct: 719 LKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGE 778
Query: 781 GRSIYNNMKAFIRY 794
GRSIYNNMKAFIRY
Sbjct: 779 GRSIYNNMKAFIRY 792
|
|
| UNIPROTKB|Q42883 LCA1 "Calcium-transporting ATPase, endoplasmic reticulum-type" [Solanum lycopersicum (taxid:4081)] | Back alignment and assigned GO terms |
|---|
Score = 2490 (881.6 bits), Expect = 1.0e-258, P = 1.0e-258
Identities = 500/788 (63%), Positives = 596/788 (75%)
Query: 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFN 80
E+ FPAW+ V++C ++Y V + GLS EV KRRE YG NELEK +G +++L+LEQF+
Sbjct: 3 EKPFPAWSWSVDQCLKEYQVKLEKGLSTYEVDKRRERYGLNELEKEKGKPLWRLVLEQFD 62
Query: 81 DTLVRIXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKA 140
DTLV+I + + +E GE A+VEPLVI IL++NAIVG+WQESNAEKA
Sbjct: 63 DTLVKILLGAAFISFVLAYVNQDETGESGFEAYVEPLVILWILVLNAIVGVWQESNAEKA 122
Query: 141 LEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVE 200
LEALKE+Q E A V RDG +P AKELVPGDIVEL+VGDKVPADMR+ L SST+RVE
Sbjct: 123 LEALKEMQGESAKVLRDGYLVPDFPAKELVPGDIVELRVGDKVPADMRVATLKSSTLRVE 182
Query: 201 QGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259
Q SLTGES V+K+ + ++ ++Q K+ MVFAGTTVVNG+C C+V NTGM TEIGK+
Sbjct: 183 QSSLTGESMPVTKSTDFLATDDCELQAKENMVFAGTTVVNGSCICIVVNTGMCTEIGKIQ 242
Query: 260 SQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKF 319
QIH+AS E DTPLKKKL++FG LT IGV+C +VW IN KYFL+WE VD WP +F+F
Sbjct: 243 RQIHDASMEESDTPLKKKLDEFGNRLTFAIGVVCLVVWAINYKYFLSWEVVDDWPSDFRF 302
Query: 320 SFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTV 379
SFEKC YYF+IAVALAVAAIPEGLP+VITTCLALGTRKMAQKNA+VRKL SVETLGCTTV
Sbjct: 303 SFEKCAYYFKIAVALAVAAIPEGLPSVITTCLALGTRKMAQKNAIVRKLQSVETLGCTTV 362
Query: 380 ICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQT 439
ICSDKTGTLTTNQM+V++ +G + R F V+GTTY+P DG I W +MDANL
Sbjct: 363 ICSDKTGTLTTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANLLL 422
Query: 440 IAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDV----- 494
+A+I A+CNDAGV G + A+G+PTEAALKV+VEKMG P+ + V
Sbjct: 423 MAEICAICNDAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSYLI 482
Query: 495 ------LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSF 548
L CC W +R ATLEFDR RKSMGV+V +G+ +LLVKGA E+LLERS++
Sbjct: 483 DRNTVKLGCCDWWMKRSKRVATLEFDRVRKSMGVIVREPNGSNRLLVKGAFESLLERSTY 542
Query: 549 VQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLL 608
VQL DGS V LD+ R L+L EMSS LRCLG AYKDDL E Y HPAH+ L
Sbjct: 543 VQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYA-ATHPAHKKL 601
Query: 609 LNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE 668
L+P+ YSSIES LVFVG+VGLRDPPREEV +A+ DC+ AGI++MVITGDNK+TAEA+CRE
Sbjct: 602 LDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCRE 661
Query: 669 IGVFGAHEDISSQSITGKEFMDIHNQKNY--LRQDGGLLFSRAEPRHKQEIVRLLKEDGE 726
I +F E++ S TGKEFM +Q+ L QDGG +FSRAEPRHKQEIVR+LKE GE
Sbjct: 662 IQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMGE 721
Query: 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYN 786
+VAMTGDGVNDAPALKLADIG+AMGI GTEVAKEASDMVLADDNF TIV+AV EGRSIYN
Sbjct: 722 IVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYN 781
Query: 787 NMKAFIRY 794
NMKAFIRY
Sbjct: 782 NMKAFIRY 789
|
|
| TAIR|locus:2134623 ECA2 "ER-type Ca2+-ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2488 (880.9 bits), Expect = 1.7e-258, P = 1.7e-258
Identities = 496/786 (63%), Positives = 602/786 (76%)
Query: 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFN 80
E++F AW+ VE+C ++Y GL+ +V+ RR+ YG+NEL K +G ++ L+LEQF+
Sbjct: 4 EKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQFD 63
Query: 81 DTLVRIXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKA 140
DTLV+I + E G AFVEP VI LILI+NA+VG+WQESNAEKA
Sbjct: 64 DTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEKA 123
Query: 141 LEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVE 200
LEALKE+Q E A V RDG +P+L A+ELVPGDIVEL VGDKVPADMR+ L +ST+RVE
Sbjct: 124 LEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRVE 183
Query: 201 QGSLTGESEAVSKTVK-TVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259
Q SLTGE+ V K V ++ ++QGK+ MVFAGTTVVNG+C C+VT+ GM+TEIGK+
Sbjct: 184 QSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKIQ 243
Query: 260 SQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGW-PRNFK 318
QIHEAS E +TPLKKKL++FG LT I ++C LVW+IN K F++W+ VDG+ P N K
Sbjct: 244 RQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNIK 303
Query: 319 FSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTT 378
FSFEKCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTT
Sbjct: 304 FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTT 363
Query: 379 VICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQ 438
VICSDKTGTLTTNQM+ T+ +G + T R F+V GTTY+P DG I W MDANLQ
Sbjct: 364 VICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIVDWGCNNMDANLQ 423
Query: 439 TIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGS-------SSSP 491
+A+I ++CNDAGV G + A+G+PTEAALKV+VEKMG PE N + S +
Sbjct: 424 AVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEEVTNFSDNG 483
Query: 492 EDV-LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQ 550
V L CC WN ++ ATLEFDR RKSM V+V+ +G +LLVKGA E++LERSSF Q
Sbjct: 484 SSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERSSFAQ 543
Query: 551 LLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLN 610
L DGS+V LD+ SR++IL+ EM+S LRCLG AYKD+L EF Y +E HP+H+ LL+
Sbjct: 544 LADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSSEE-HPSHKKLLD 602
Query: 611 PTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670
P++YS+IE+ L+FVG+VGLRDPPREEV +AIEDC+ AGIRVMVITGDNK+TAEAIC EI
Sbjct: 603 PSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICCEIR 662
Query: 671 VFGAHEDISSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVV 728
+F +ED+S S TGKEFM + + L + GG +FSRAEPRHKQEIVR+LKE GE+V
Sbjct: 663 LFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMGEIV 722
Query: 729 AMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNM 788
AMTGDGVNDAPALKLADIG+AMGI GTEVAKEASDMVLADDNF TIV+AV EGRSIYNNM
Sbjct: 723 AMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNM 782
Query: 789 KAFIRY 794
KAFIRY
Sbjct: 783 KAFIRY 788
|
|
| ZFIN|ZDB-GENE-020905-1 atp2a1 "ATPase, Ca++ transporting, cardiac muscle, fast twitch 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1687 (598.9 bits), Expect = 1.3e-173, P = 1.3e-173
Identities = 384/792 (48%), Positives = 511/792 (64%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A K+ EC +GV+ GL+ +VKK + YG+NEL EG SI++L++EQF D LVR
Sbjct: 4 AHTKETPECLAYFGVSESTGLTPEQVKKNQAKYGFNELPAEEGKSIWELVVEQFEDLLVR 63
Query: 86 IXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
I W+ E GE +TAFVEP VI LILI NA+VG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETVTAFVEPFVILLILIANAVVGVWQERNAESAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+E+VPGDIVE+ VGDKVPAD+R+ + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRSDRKSVQRIKAREIVPGDIVEVSVGDKVPADIRITAIRSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K ++VP+ + Q KK M+F+GT + G +V TG++TEIGK+ Q+
Sbjct: 181 TGESVSVIKHTESVPDPRAVNQDKKNMLFSGTNIAAGKAIGVVVATGVSTEIGKIRDQM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ +E TPL++KL++FGE L+ +I +IC VWLIN+ +F + W R
Sbjct: 240 -AATEQEKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAG---TLRSFNVQGTTYNPSDGRI--EGWPV--GRMDAN 436
KTGTLTTNQM VTK+ + G TL +++ G+ Y P +G + G PV G+ D
Sbjct: 352 KTGTLTTNQMCVTKMFVIEKVEGESVTLDQYDISGSKYTP-EGEVTKNGLPVKCGQFDG- 409
Query: 437 LQTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMG-FPEGVNHGSSSSPED 493
L +A I A+CND+ ++ +S Y G TE AL +VEKM F V S E
Sbjct: 410 LVELATICALCNDSSLDYNESKGIYEKVGEATETALCCLVEKMNVFNTDVR--GLSKVER 467
Query: 494 VLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNK-----KLLVKGAVENLLERSSF 548
CC + L ++ TLEF RDRKSM V + + +K K+ VKGA E +++R ++
Sbjct: 468 ANTCCAVIKQLMKKDFTLEFSRDRKSMSVYCSPAKASKAPVGNKMFVKGAPEGVIDRCAY 527
Query: 549 VQLLDGSV-VELDQYSRDLILQSLQEMSS--TALRCLGFAYKDD-LREFETYDGDEDHPA 604
V++ G+ V L +D I+ ++E + LRCL A +D+ LR P
Sbjct: 528 VRV--GTTRVPLTGPVKDKIMAVIKEWGTGRDTLRCLALATRDNPLR-----------PE 574
Query: 605 HQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEA 664
L + T ++ E+ L FVG VG+ DPPR+EV +IE C+AAGIRV++ITGDNK TA A
Sbjct: 575 EMNLEDSTKFAEYETDLTFVGCVGMLDPPRKEVVGSIELCRAAGIRVIMITGDNKGTAVA 634
Query: 665 ICREIGVFGAHEDISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRHKQEIVRLLK 722
ICR IG+F ED++ ++ TG+EF D+ Q+ +R+ ++R EP HK +IV L+
Sbjct: 635 ICRRIGIFSDDEDVTGRAFTGREFDDLPLPQQREAVRK--ACCYARVEPSHKSKIVEFLQ 692
Query: 723 EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGR 782
E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF +IVAAV EGR
Sbjct: 693 GFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGR 751
Query: 783 SIYNNMKAFIRY 794
+IYNNMK FIRY
Sbjct: 752 AIYNNMKQFIRY 763
|
|
| ZFIN|ZDB-GENE-041229-2 atp2a1l "ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 like" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1672 (593.6 bits), Expect = 4.9e-172, P = 4.9e-172
Identities = 382/788 (48%), Positives = 504/788 (63%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A K EC + V+ GLS + KK YGYNEL EG SI++LI+EQF D LVR
Sbjct: 4 AHTKGPAECLAYFSVSETTGLSPEQFKKNLAKYGYNELPAEEGKSIWELIIEQFEDLLVR 63
Query: 86 IXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
I W+ E GE ITAFVEP VI LILI NA+VG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAVVGVWQERNAESAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+E+VPGDIVE+ VGDKVPAD+R+ + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRSDRKSVQMIKAREIVPGDIVEVSVGDKVPADIRITHIRSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K + VP+ + Q KK M+F+GT + G + TG+ TEIGK+ Q+
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAVGVAVATGVATEIGKIRDQM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ +E TPL++KL++FGE L+ +I +IC VW+IN+ +F + W R
Sbjct: 240 -AATEQEKTPLQQKLDEFGEQLSKVISLICVAVWMINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAGT---LRSFNVQGTTYNPSDGRIEGWPVG-RMDAN--- 436
KTGTLTTNQM VTK+ + G L SF++ G+ Y P +G + +G ++D +
Sbjct: 352 KTGTLTTNQMCVTKMFVIDRIDGDHVELDSFDISGSKYTP-EGEVT--KLGAKVDCSQYD 408
Query: 437 -LQTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPED 493
L +A I A+CND+ ++ ++ Y G TE AL +VEKM + N G+ S E
Sbjct: 409 GLVELATICALCNDSSLDYNETKKIYEKVGEATETALCCLVEKMNVFKS-NVGNLSKVER 467
Query: 494 VLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGN--KKLLVKGAVENLLERSSFVQL 551
CC + L ++ TLEF RDRKSM V G+ K+ VKGA E +++R ++V++
Sbjct: 468 ANACCSVVKQLMKKNFTLEFSRDRKSMSVYCTPVKGDAGSKMFVKGAPEGVIDRCTYVRV 527
Query: 552 LDGSV-VELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAHQLL 608
GS V L +D I+ ++E + LRCL A +D + E + L
Sbjct: 528 --GSTRVPLTGAVKDKIMNVIKEWGTGRDTLRCLALATRDSPLKVEEMN----------L 575
Query: 609 LNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE 668
+ T ++ E+ L FVG VG+ DPPR+EV +IE C+AAGIRV++ITGDNK TA AICR
Sbjct: 576 EDSTKFADYETDLTFVGCVGMLDPPRKEVTGSIELCRAAGIRVIMITGDNKGTAVAICRR 635
Query: 669 IGVFGAHEDISSQSITGKEFMDI-HN-QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGE 726
IG+F ED++ ++ TG+EF D+ H+ Q +R+ F+R EP HK +IV L+ E
Sbjct: 636 IGIFSEDEDVTGKAYTGREFDDLPHSEQSEAVRR--ACCFARVEPSHKSKIVEFLQGYDE 693
Query: 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYN 786
+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF +IVAAV EGR+IYN
Sbjct: 694 ITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYN 752
Query: 787 NMKAFIRY 794
NMK FIRY
Sbjct: 753 NMKQFIRY 760
|
|
| UNIPROTKB|F1RFH9 ATP2A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1667 (591.9 bits), Expect = 1.7e-171, P = 1.7e-171
Identities = 384/791 (48%), Positives = 511/791 (64%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A +K EEC +GV+ GL+ +VK+ E YG+NEL EG S+++L++EQF D LVR
Sbjct: 4 AHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVR 63
Query: 86 IXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
I W+ EEG E +TAFVEP VI LILI NAIVG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF--EEGEET-VTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+++VPGDIVE+ VGDKVPAD+R+L + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRADRKAVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K + VP+ + Q KK M+F+GT + G +V TG+NTEIGK+ Q+
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVNTEIGKIRDQM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ ++ TPL++KL++FGE L+ +I +IC VWLIN+ +F + W R
Sbjct: 240 -AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAGT---LRSFNVQGTTYNPSDGRI--EGWPV--GRMDAN 436
KTGTLTTNQM+V K+ + G L F++ G+TY P +G + PV G+ D
Sbjct: 352 KTGTLTTNQMSVCKMFVIDKVEGDICLLNEFSITGSTYAP-EGEVLKNDKPVRAGQYDG- 409
Query: 437 LQTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMG-FPEGVNHGSSSSPED 493
L +A I A+CND+ ++ ++ Y G TE AL +VEKM F V + S E
Sbjct: 410 LVELATICALCNDSSLDFNEAKGVYEKVGEATETALTTLVEKMNVFNTDVRN--LSKVER 467
Query: 494 VLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSS-----GNKKLLVKGAVENLLERSSF 548
C + L ++ TLEF RDRKSM V + + GNK + VKGA E ++ER ++
Sbjct: 468 ANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNK-MFVKGAPEGVIERCNY 526
Query: 549 VQLLDGSV-VELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAH 605
V++ G+ V + ++ IL ++E + LRCL A +D T ED
Sbjct: 527 VRV--GTTRVPMTGPVKERILSVIKEWGTGRDTLRCLALATRD------TPPKRED---- 574
Query: 606 QLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAI 665
+L + + E+ L FVG+VG+ DPPR+EV +I+ C+ AGIRV++ITGDNK TA AI
Sbjct: 575 MVLDDSARFMEYETDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAI 634
Query: 666 CREIGVFGAHEDISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKE 723
CR IG+FG +ED++ ++ TG+EF D+ Q+ R+ F+R EP HK +IV L+
Sbjct: 635 CRRIGIFGENEDVADRAYTGREFDDLPLPEQREACRR--ACCFARVEPSHKSKIVEYLQS 692
Query: 724 DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRS 783
E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EGR+
Sbjct: 693 YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRA 751
Query: 784 IYNNMKAFIRY 794
IYNNMK FIRY
Sbjct: 752 IYNNMKQFIRY 762
|
|
| UNIPROTKB|P70083 atp2a1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Makaira nigricans (taxid:13604)] | Back alignment and assigned GO terms |
|---|
Score = 1665 (591.2 bits), Expect = 2.7e-171, P = 2.7e-171
Identities = 379/785 (48%), Positives = 500/785 (63%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A K EC +GVN GLS + KK + +GYNEL EG SI+ LI+EQF D LVR
Sbjct: 4 AHTKSPAECLSYFGVNEHTGLSPDQFKKNLDKFGYNELPAEEGKSIWDLIVEQFEDLLVR 63
Query: 86 IXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
I W+ E GE ITAFVEP VI LILI NAIVG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+E+VPGDIVE+ VGDKVPAD+R++ + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRSDRKSVQRIKAREIVPGDIVEVSVGDKVPADIRIVSIKSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K ++VP+ + Q KK M+F+GT + G + TG++TEIGK+ Q+
Sbjct: 181 TGESVSVIKHTESVPDPRAVNQDKKNMLFSGTNIAAGKAIGVAIATGVSTEIGKIRDQM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ +E TPL+ KL++FGE L+ +I +IC VW IN+ +F + W R
Sbjct: 240 -AATEQEKTPLQAKLDEFGEQLSKVISLICVAVWAINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAGT---LRSFNVQGTTYNPSDGRIE-GWPVGRMDA--NL 437
KTGTLTTNQM VTK+ V S G L +F++ G+ Y P +G + G A L
Sbjct: 352 KTGTLTTNQMCVTKMFIVKSVDGDHVDLNAFDISGSKYTP-EGEVSHGGSKTNCSAYDGL 410
Query: 438 QTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMG-FPEGVNHGSSSSPEDV 494
+A I A+CND+ ++ +S Y G TE AL +VEKM F V + S E
Sbjct: 411 VELATICALCNDSSLDYNESKKIYEKVGEATETALCCLVEKMNVFNSNVKN--LSRIERA 468
Query: 495 LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGN--KKLLVKGAVENLLERSSFVQLL 552
CC + L ++ TLEF RDRKSM V + G+ K+ VKGA E +++R ++V++
Sbjct: 469 NACCTVIKQLMKKNFTLEFSRDRKSMSVYCTPAKGDGGAKMFVKGAPEGVIDRCAYVRV- 527
Query: 553 DGSV-VELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAHQLLL 609
G+ V L ++ I+ +++ + LRCL A +D + E + L
Sbjct: 528 -GTTRVPLTSAIKEKIMAVIRDWGTGRDTLRCLALATRDTPLKVEEMN----------LE 576
Query: 610 NPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI 669
+ T ++ E+ + FVG VG+ DPPR+EV +IE C+ AGIRV++ITGDNK TA AICR I
Sbjct: 577 DSTKFADYETDMTFVGCVGMLDPPRKEVTGSIELCRDAGIRVIMITGDNKGTAIAICRRI 636
Query: 670 GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVA 729
G+F ED+S+++ TG+EF D+ +Q F+R EP HK +IV L+ + ++ A
Sbjct: 637 GIFKEDEDVSNKAYTGREFDDLPSQDQAEAVRRACCFARVEPSHKSKIVEFLQGNDDITA 696
Query: 730 MTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK 789
MTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF +IVAAV EGR+IYNNMK
Sbjct: 697 MTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMK 755
Query: 790 AFIRY 794
FIRY
Sbjct: 756 QFIRY 760
|
|
| ZFIN|ZDB-GENE-040426-702 atp2a2a "ATPase, Ca++ transporting, cardiac muscle, slow twitch 2a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1661 (589.8 bits), Expect = 7.2e-171, P = 7.2e-171
Identities = 382/790 (48%), Positives = 503/790 (63%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A K VEE + VN GL++ +VK+ R+ +G NEL EG SI++L++EQF D LVR
Sbjct: 4 AHTKSVEEVYSNFSVNESTGLTLDQVKRNRDKWGPNELPAEEGKSIWELVIEQFEDLLVR 63
Query: 86 IXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
I W+ E GE ITAFVEP VI LILI NAIVG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + AK++VPGDIVE+ VGDKVPAD+R+ + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEVAVGDKVPADIRISAIKSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K VP+ + Q KK M+F+GT + G +V TG+NTEIGK+ ++
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAIGVVVATGVNTEIGKIRDEM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
AS +E TPL++KL++FGE L+ +I +IC VW+IN+ +F + W R
Sbjct: 240 -ASTEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAG---TLRSFNVQGTTYNPS-----DGRIEGWPVGRMDA 435
KTGTLTTNQM+V ++ + G +L F + G+TY P D RI + D
Sbjct: 352 KTGTLTTNQMSVCRMFIIDKAEGENCSLTEFTISGSTYAPEGDVCLDNRIV--KCSQYDG 409
Query: 436 NLQTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMG-FPEGVNHGSSSSPE 492
L +A I A+CND+ ++ +S Y G TE AL +VEKM F V + S E
Sbjct: 410 -LVELATICALCNDSSLDFNESKGVYEKVGEATETALTCLVEKMNVFDTDVRN--LSKIE 466
Query: 493 DVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVN---SSSGNKKLLVKGAVENLLERSSFV 549
C + L ++ TLEF RDRKSM V + + S + K+ VKGA E +++R ++V
Sbjct: 467 RANACNAVIKQLMKKEFTLEFSRDRKSMSVYCSPNKAKSSSSKMFVKGAPEGVIDRCAYV 526
Query: 550 QLLDGSVVELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAHQL 607
++ GS V L Q +D I+ ++E + LRCL A +D+ + E ++
Sbjct: 527 RV-GGSKVPLTQGIKDKIMSVIREYGTGRDTLRCLALATRDNPLKKE-----------EM 574
Query: 608 LLNPT-NYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC 666
+L+ T ++ ES L FVG VG+ DPPR EV +I+ C+ AGIRV++ITGDNK TA AIC
Sbjct: 575 VLSDTARFADYESDLTFVGCVGMLDPPRTEVAASIKLCRHAGIRVIMITGDNKGTAVAIC 634
Query: 667 REIGVFGAHEDISSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKED 724
R IG+F +D+ + TG+EF D+ H Q+ + F+R EP HK +IV L+
Sbjct: 635 RRIGIFSDEDDVHRMAFTGREFDDLSPHAQREAVTV--ARCFARVEPSHKSKIVEFLQGF 692
Query: 725 GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSI 784
E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EGR+I
Sbjct: 693 DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAI 751
Query: 785 YNNMKAFIRY 794
YNNMK FIRY
Sbjct: 752 YNNMKQFIRY 761
|
|
| UNIPROTKB|Q0VCY0 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1659 (589.1 bits), Expect = 1.2e-170, P = 1.2e-170
Identities = 383/791 (48%), Positives = 510/791 (64%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A +K EEC +GV+ GL+ +VK+ E YG+NEL EG S+++L+LEQF D LVR
Sbjct: 4 AHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVLEQFEDLLVR 63
Query: 86 IXXXXXXXXXXXXWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
I W+ EEG E +TAFVEP VI LILI NAIVG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF--EEGEET-VTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 146 EIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204
E + E V R D K + + A+++VPGDIVE+ VGDKVPAD+R+L + S+T+RV+Q L
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 205 TGESEAVSKTVKTVPENSDI-QGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
TGES +V K + VP+ + Q KK M+F+GT + G +V TG+ TEIGK+ Q+
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTEIGKIRDQM- 239
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A+ ++ TPL++KL++FGE L+ +I +IC VWLIN+ +F + W R
Sbjct: 240 -AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRG------- 291
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICSD
Sbjct: 292 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 351
Query: 384 KTGTLTTNQMAVTKLVAVGSRAGTL---RSFNVQGTTYNPSDGRI--EGWPV--GRMDAN 436
KTGTLTTNQM+V K+ + G L F+V G+TY P +G + PV G+ D
Sbjct: 352 KTGTLTTNQMSVCKMFIIDRIDGDLCLLNEFSVTGSTYAP-EGEVLKNDKPVRSGQYDG- 409
Query: 437 LQTIAKISAVCNDAGVE--QSGNHYVASGMPTEAALKVMVEKMG-FPEGVNHGSSSSPED 493
L +A I A+CND+ ++ ++ Y G TE AL +VEKM F V + S E
Sbjct: 410 LVELATICALCNDSSLDFNETKGIYEKVGEATETALTTLVEKMNVFNTEVRN--LSKVER 467
Query: 494 VLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSS-----GNKKLLVKGAVENLLERSSF 548
C + L ++ TLEF RDRKSM V + + GNK + VKGA E +++R ++
Sbjct: 468 ANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNK-MFVKGAPEGVIDRCNY 526
Query: 549 VQLLDGSV-VELDQYSRDLILQSLQEMSS--TALRCLGFAYKDDLREFETYDGDEDHPAH 605
V++ G+ V + ++ IL ++E + LRCL A +D + E
Sbjct: 527 VRV--GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------E 574
Query: 606 QLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAI 665
+L + T + E+ L FVG+VG+ DPPR+EV +I+ C+ AGIRV++ITGDNK TA AI
Sbjct: 575 MVLDDSTKFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAI 634
Query: 666 CREIGVFGAHEDISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKE 723
CR IG+FG +ED++ ++ TG+EF D+ Q+ R+ F+R EP HK +IV L+
Sbjct: 635 CRRIGIFGENEDVADRAYTGREFDDLPLAEQREACRR--ACCFARVEPTHKSKIVEYLQS 692
Query: 724 DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRS 783
E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EGR+
Sbjct: 693 FDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRA 751
Query: 784 IYNNMKAFIRY 794
IYNNMK FIRY
Sbjct: 752 IYNNMKQFIRY 762
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9XES1 | ECA4_ARATH | 3, ., 6, ., 3, ., 8 | 0.8211 | 0.9694 | 0.7464 | yes | no |
| P92939 | ECA1_ARATH | 3, ., 6, ., 3, ., 8 | 0.8236 | 0.9694 | 0.7464 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 817 | |||
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-162 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-134 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-125 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-114 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-113 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 7e-65 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-64 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-44 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-40 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-40 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-38 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-38 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-37 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-37 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 2e-31 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-31 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-29 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 1e-29 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-29 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-28 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-28 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 6e-28 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-26 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-24 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 3e-20 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 5e-20 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 1e-19 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-19 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 5e-19 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-18 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 3e-18 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-18 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 4e-17 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 3e-16 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-14 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 5e-11 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-10 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 7e-10 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-09 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 5e-09 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-06 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 6e-06 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 4e-05 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 9e-05 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 3e-04 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 4e-04 | |
| TIGR01488 | 177 | TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superf | 6e-04 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 0.001 | |
| pfam12710 | 122 | pfam12710, HAD, haloacid dehalogenase-like hydrola | 0.002 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.004 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 1006 bits (2602), Expect = 0.0
Identities = 420/727 (57%), Positives = 511/727 (70%), Gaps = 36/727 (4%)
Query: 75 ILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQE 134
+LEQF D LVRILL+AA VSFVLAW+ E GE +TAFVEP VI LIL+ NAIVG+WQE
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWF---EEGEETVTAFVEPFVILLILVANAIVGVWQE 57
Query: 135 SNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTS 194
NAEKA+EALKE +SE A V RDG+ + AK+LVPGDIVEL VGDKVPAD+R+L L
Sbjct: 58 RNAEKAIEALKEYESEHAKVLRDGRWSV-IKAKDLVPGDIVELAVGDKVPADIRVLSL-- 114
Query: 195 STVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNT 253
T+RV+Q LTGES +V+K ++VP E + Q KK M+F+GT VV G +V TGM+T
Sbjct: 115 KTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMST 174
Query: 254 EIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGW 313
EIGK+ ++ A Q EDTPL+KKL++FGE+L+ +IG+IC LVW+IN+ +F GW
Sbjct: 175 EIGKIRDEMRAAEQ--EDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232
Query: 314 PRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVET 373
+ YYF+IAVALAVAAIPEGLPAVITTCLALGTRKMA+KNA+VRKLPSVET
Sbjct: 233 -------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVET 285
Query: 374 LGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGR- 432
LGCTTVICSDKTGTLTTNQM+V K+VA+ + +L F V GTTY P G I+
Sbjct: 286 LGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAG 345
Query: 433 -MDANLQTIAKISAVCNDAGV---EQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSS 488
DA L+ +A I+A+CND+ + E+ G Y G TEAALKV+VEKMG P N G S
Sbjct: 346 GQDAGLEELATIAALCNDSSLDFNERKGV-YEKVGEATEAALKVLVEKMGLPATKN-GVS 403
Query: 489 SSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSF 548
S L C +WN ++ ATLEF RDRKSM VL S+GNK L VKGA E +LER +
Sbjct: 404 SKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNK-LFVKGAPEGVLERCTH 462
Query: 549 VQLLDGSVVELDQYSRDLILQSLQEMSST-ALRCLGFAYKDDLREFETYDGDEDHPAHQL 607
+ DG V L ++ IL ++EM +T ALRCL A+KD E +
Sbjct: 463 ILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSD------- 515
Query: 608 LLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR 667
P N+ +IES L F+G+VG+ DPPR EV AIE C+ AGIRV++ITGDNK TAEAICR
Sbjct: 516 ---PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICR 572
Query: 668 EIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEV 727
IG+F ED++ +S TG+EF ++ K +LFSR EP HK E+V LL+E GE+
Sbjct: 573 RIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEI 632
Query: 728 VAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNN 787
VAMTGDGVNDAPALK ADIG+AMG +GTEVAKEASDMVLADDNF TIVAAV EGR+IYNN
Sbjct: 633 VAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNN 691
Query: 788 MKAFIRY 794
MK FIRY
Sbjct: 692 MKQFIRY 698
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 643 bits (1660), Expect = 0.0
Identities = 301/777 (38%), Positives = 422/777 (54%), Gaps = 98/777 (12%)
Query: 27 WAKDVEECE--EKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLV 84
VE E + +P GLS EVK+R + YG NEL + + S+ + L QF D +
Sbjct: 24 HPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFI 83
Query: 85 RILLVAAVVSFVL-AWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEA 143
+LLVAA++S + W D V+ +VI L++++NA++G QE AEKALEA
Sbjct: 84 ILLLVAALLSAFVGDWVDA----------GVDAIVILLVVVINALLGFVQEYRAEKALEA 133
Query: 144 LKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGS 203
LK++ S +A V RDGK + + A ELVPGDIV L+ GD VPAD+RLL SS + V++ +
Sbjct: 134 LKKMSSPKAKVLRDGKFV-EIPASELVPGDIVLLEAGDVVPADLRLL--ESSDLEVDESA 190
Query: 204 LTGESEAVSK--TVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQ 261
LTGES V K T + + M+F+GTTVV+G +V TG TE GK+
Sbjct: 191 LTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARL 250
Query: 262 IHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSF 321
+ ++ E TPL++KLN+ G+ L ++ V+ ALV+++ + +G +F
Sbjct: 251 L--PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-----NGLLESFLT-- 301
Query: 322 EKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVIC 381
A+ALAVAA+PEGLPAV+T LALG ++MA+ NA+VR L ++ETLG VIC
Sbjct: 302 ---------ALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVIC 352
Query: 382 SDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIA 441
SDKTGTLT N+M V K+ G G + D + L
Sbjct: 353 SDKTGTLTQNKMTVKKIYINGG-----------GKDIDDKDLKDS--------PALLRFL 393
Query: 442 KISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLW 501
+A+CN E++G + PTE AL EK+GF ++
Sbjct: 394 LAAALCNSVTPEKNGWYQAGD--PTEGALVEFAEKLGFSLDLSG---------------L 436
Query: 502 NTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQ 561
A + FD +RK M V+V + G L VKGA E +LER + G + L +
Sbjct: 437 EVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTE 492
Query: 562 YSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRL 621
+ ++++E++S LR L AYK R + + DE IES L
Sbjct: 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDE----------------IESDL 536
Query: 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQ 681
VF+G+ G+ DPPRE+V++AIE+ + AGI+V +ITGD+ TA AI +E G+ E S+
Sbjct: 537 VFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEA--EAESAL 594
Query: 682 SITGKEF--MDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAP 739
I G E + + + +F+R P K IV L++ G VVAMTGDGVNDAP
Sbjct: 595 VIDGAELDALSDEELAELVEELS--VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAP 652
Query: 740 ALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGF 796
ALK AD+G+AMG GT+ AKEA+D+VL DDNF TIV AV EGR +Y N+K FI Y
Sbjct: 653 ALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLL 709
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 492 bits (1269), Expect = e-162
Identities = 274/775 (35%), Positives = 408/775 (52%), Gaps = 108/775 (13%)
Query: 31 VEECEEKYGVNPKIGL-SVGEVKKRREIYGYNELEKHEGTSIFQLILEQF-NDTLVRILL 88
VEE K + + GL S E RR +G+NE + E S+++ L QF + L+ +L+
Sbjct: 9 VEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLI 68
Query: 89 VAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQ 148
+AV+S + D + + I L +++ VG QE +EK+LEAL ++
Sbjct: 69 ASAVISVFMGNID-------------DAVSITLAILIVVTVGFVQEYRSEKSLEALNKLV 115
Query: 149 SEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGES 208
+ + R+GK L A LVPGD+V L VGD+VPAD+R++ + +++ +LTGE+
Sbjct: 116 PPECHLIREGKLEHVL-ASTLVPGDLVCLSVGDRVPADLRIVEAVD--LSIDESNLTGET 172
Query: 209 EAVSKTVKTVPENS--DIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEAS 266
VSK +P + D+ + + F GT V G +V TG NTE G V +
Sbjct: 173 TPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIE 232
Query: 267 QNEEDTPLKKKLNQFGEVLTM----IIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFE 322
+ + TPL+K ++ G+ L++ +IGVIC LV K +L
Sbjct: 233 KPK--TPLQKSMDLLGKQLSLVSFGVIGVIC-LVGWFQGKDWLE---------------- 273
Query: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
F I+V+LAVAAIPEGLP ++T LALG +M++K A+VRKLPSVETLG VICS
Sbjct: 274 ----MFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICS 329
Query: 383 DKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAK 442
DKTGTLT N M VTK+ L + ++ DG G + I +
Sbjct: 330 DKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDG---DVLHGFYTVAVSRILE 386
Query: 443 ISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWN 502
+CN+A + + G PT+ AL ++ K G + L
Sbjct: 387 AGNLCNNAKFRNEADTLL--GNPTDVALIELLMKFGLDD------------------LRE 426
Query: 503 TLEQRFATLEFDRDRKSMGVLVNSSSGNKKLL-VKGAVENLLERSSFVQLLDGSVVELDQ 561
T R A + F +RK M V ++ +KGA E +L+ ++ Q DG + L Q
Sbjct: 427 TY-IRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQ 485
Query: 562 YSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRL 621
RD+I + EM+S LR + FA + + L
Sbjct: 486 QQRDVIQEEAAEMASAGLRVIAFASGPEKGQ----------------------------L 517
Query: 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQ 681
F+G+VG+ DPPR V++A+ G+R+++ITGD++ TA +I R +G+ +SQ
Sbjct: 518 TFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP----SKTSQ 573
Query: 682 SITGKEFMDIHNQKNYLRQ--DGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAP 739
S++G++ + +Q+ L Q +F+RA P HK +IV+ L++ G+VVAMTGDGVNDAP
Sbjct: 574 SVSGEKLDAMDDQQ--LSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAP 631
Query: 740 ALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRY 794
ALKLADIGVAMG GT+VAKEA+DM+L DD+F TI++A+ EG+ I+NN+K FI +
Sbjct: 632 ALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITF 686
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 410 bits (1055), Expect = e-134
Identities = 201/682 (29%), Positives = 297/682 (43%), Gaps = 170/682 (24%)
Query: 118 VIFLILIVNAIVGIWQESNAEKALEALK--EIQSEQATVTRDGKKIPSLSAKELVPGDIV 175
I +++V ++ + Q+ AE L +L + + ATV R+G K + AK+LVPGD+V
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWK--EIPAKDLVPGDVV 58
Query: 176 ELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGT 235
+K G+ VPAD LL S + V++ +LTGES V KT ++ I G +VFAGT
Sbjct: 59 LVKSGETVPADGVLL---SGSCFVDESNLTGESNPVLKTALKETQSGTITG--DLVFAGT 113
Query: 236 TVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEV-LTMIIGVICA 294
V GT +VT TG+ T +G++ + + TPL+ K ++ + + ++
Sbjct: 114 YVFGGTLIVVVTPTGILTTVGRIAVVVKTGFETR--TPLQSKRDRLENFIFILFLLLLAL 171
Query: 295 LVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALG 354
V+L S K A+ + V +P LPA +T LA+G
Sbjct: 172 AVFLYLFIRGWD-----------PNSIFKA---LLRALIVLVIVVPPALPAAVTVALAVG 217
Query: 355 TRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQ 414
++A+K LVR L ++E LG +CSDKTGTLT N+M + V + S V
Sbjct: 218 DARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQG-VYIDGGKEDNSSSLVA 276
Query: 415 GTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMV 474
SG+ P E AL
Sbjct: 277 C----------------------------------DNNYLSGD-------PMEKALLKSA 295
Query: 475 EKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLL 534
E +G + N + F K M V+V + G+ L
Sbjct: 296 ELVGKADKG------------------NKEYKILDVFPFSSVLKRMSVIVETPDGSDLLF 337
Query: 535 VKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFE 594
VKGA E +LER + + + E++ LR L FA K+
Sbjct: 338 VKGAPEFILERCNNYE------------------EKYLELARQGLRVLAFASKE------ 373
Query: 595 TYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVI 654
+E L F+G++ DP R + ++ IE+ KAAGI+V++I
Sbjct: 374 ----------------------LEDDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMI 411
Query: 655 TGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHK 714
TGDN TA+AI +E+G+ F+R P K
Sbjct: 412 TGDNVLTAKAIAKELGIDV--------------------------------FARVSPEQK 439
Query: 715 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTI 774
+IV L++ G +VAMTGDGVNDAPALK AD+G+AMG AK A+D+VL DD+ I
Sbjct: 440 LQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDDLSAI 493
Query: 775 VAAVGEGRSIYNNMKAFIRYGF 796
V AV EGR I++N+K+ I +
Sbjct: 494 VKAVKEGRKIFSNIKSNIFWAI 515
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 398 bits (1024), Expect = e-125
Identities = 238/773 (30%), Positives = 373/773 (48%), Gaps = 84/773 (10%)
Query: 30 DVEECEEKYGVNPKIGLSVG--EVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRIL 87
E K + G+ + +++R ++YG NEL + S Q++ +D + +L
Sbjct: 44 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILL 103
Query: 88 LVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEI 147
VAAVVS VL + EG T ++E + I + +I+ +V + E L
Sbjct: 104 SVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNRE 163
Query: 148 QSEQA-TVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTG 206
+S Q V R G++ +S ++V GDIV L GD VPAD + ++ +++ S+TG
Sbjct: 164 KSAQKIAVIRGGQEQ-QISIHDIVVGDIVSLSTGDVVPADGVFIS--GLSLEIDESSITG 220
Query: 207 ESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEAS 266
ES+ + K + + +GT V G+ LVT G+N+ GK+ ++ +A
Sbjct: 221 ESDPIKKG----------PVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAG 270
Query: 267 QNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTY 326
E+ TPL++KL++ L +IG ++ + + + E
Sbjct: 271 --EDSTPLQEKLSE----LAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQT 324
Query: 327 ---YFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383
+F IAV + V A+PEGLP +T LA +KM + N LVR L + ET+G T ICSD
Sbjct: 325 FLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSD 384
Query: 384 KTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKI 443
KTGTLT N M+V + R FNV+ N +++ I
Sbjct: 385 KTGTLTQNVMSVVQGYIGEQR------FNVRDVLRNVP-------------KHVRNILVE 425
Query: 444 SAVCNDAG--VEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLW 501
N + V G G TE AL + ++V
Sbjct: 426 GISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRD----------YQEVRA----- 470
Query: 502 NTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQ 561
E+ F+ +RK M V+V S G + KGA E +L+ +G +
Sbjct: 471 --EEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISD 528
Query: 562 YSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRL 621
+D ++ ++S ALR + AY+D E +D+P L
Sbjct: 529 DDKDRCADVIEPLASDALRTICLAYRDFAPEEFP---RKDYP--------------NKGL 571
Query: 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQ 681
+G+VG++DP R VR+A+++C+ AGI V ++TGDN +TA+AI R G+ +
Sbjct: 572 TLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL--TFGGLA- 628
Query: 682 SITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 741
+ GKEF + ++ + +R+ P KQ +V +LK+ GEVVA+TGDG NDAPAL
Sbjct: 629 -MEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPAL 687
Query: 742 KLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRY 794
KLAD+G +MGI+GTEVAKEASD++L DDNF +IV AV GR++Y+N++ F+++
Sbjct: 688 KLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQF 740
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-114
Identities = 247/856 (28%), Positives = 423/856 (49%), Gaps = 132/856 (15%)
Query: 23 TFPAWAKDVEECEEKY-GVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFND 81
F A+ D+ + ++ G + GL+ E + R + G N LE G ++L Q +
Sbjct: 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCN 62
Query: 82 TLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKAL 141
+ +L++AA +SF A +D EGG VI I+ +N ++G QE AEK +
Sbjct: 63 AMCMVLIIAAAISF--AMHDWIEGG-----------VISAIIALNILIGFIQEYKAEKTM 109
Query: 142 EALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQ 201
++LK + S A V R+GK ++ + +LVPGDI LK GD +PAD+RL+ + ++
Sbjct: 110 DSLKNLASPMAHVIRNGKS-DAIDSHDLVPGDICLLKTGDTIPADLRLIE--TKNFDTDE 166
Query: 202 GSLTGESEAVSKTVKTV---PENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKV 258
LTGES V K E++ I + + F+ + V G + T +N+EIG +
Sbjct: 167 ALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAI 226
Query: 259 HSQIHEA----SQNEED-----------------------------TPLKKKLNQFGEVL 285
+ + + E+D TPL +KL++ V+
Sbjct: 227 AAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLA-VI 285
Query: 286 TMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPA 345
I +I A++ + K+ + ++ Y A+ LA++ IPE L A
Sbjct: 286 LFCIAIIFAIIVMAAHKFDVD---------------KEVAIY---AICLAISIIPESLIA 327
Query: 346 VITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRA 405
V++ +A+G M+++N +VRKL ++E LG ICSDKTGT+T +M + + + + R
Sbjct: 328 VLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKM-IARQIWI-PRF 385
Query: 406 GTLRSFNVQGTTYNPSDGRIEGWPVGR------------------------------MDA 435
GT+ S + +NP++G + G P +D
Sbjct: 386 GTI-SIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDM 444
Query: 436 NL-QTIAKISAVCNDAGV--EQSGNHYVASGMPTEAALKVMVEKMGFP-------EGVNH 485
+L + + +A+ N A V + + + + A G PTE A+ V +K P E +
Sbjct: 445 DLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLK 504
Query: 486 GSSSSPEDVLRCCQLWNTLEQRF-ATLEFDRDRKSMGVLVNSSSGNK-KLLVKGAVENLL 543
+ + + + + + + F A FD + K M + + G + KGA E ++
Sbjct: 505 SNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERII 564
Query: 544 ERSSFVQLLDG-SVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDH 602
E S DG + L+ R+LI+ +++ +++ LR L FA K ++D +++
Sbjct: 565 ECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASK-------SFDKADNN 617
Query: 603 PAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTA 662
QL N ++ ES L F+G++G+ DPPR E A+E C AGI V ++TGD TA
Sbjct: 618 D-DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETA 676
Query: 663 EAICREIGVFGAH------EDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQE 716
+AI +E+G+ + E + S +TG +F + +++ + L+ +R P+ K +
Sbjct: 677 KAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVK 736
Query: 717 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA 776
++ L AMTGDGVND+P+LK+A++G+AMGI G++VAK+ASD+VL+DDNF +I+
Sbjct: 737 MIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILN 796
Query: 777 AVGEGRSIYNNMKAFI 792
A+ EGR +++N+ F+
Sbjct: 797 AIEEGRRMFDNIMKFV 812
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 367 bits (943), Expect = e-113
Identities = 248/813 (30%), Positives = 396/813 (48%), Gaps = 131/813 (16%)
Query: 31 VEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVA 90
++E E KYG + GLS + G N L T + Q +L +
Sbjct: 22 LDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIG 81
Query: 91 AVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE 150
A++ F+ E + +V+ ++I+ +QE+ + K +E+ K + +
Sbjct: 82 AILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQ 141
Query: 151 QATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEA 210
QA V RDG+K S++A+++V GD+VE+K GD++PAD+R++ ++ +V+ SLTGESE
Sbjct: 142 QALVIRDGEK-MSINAEQVVVGDLVEVKGGDRIPADLRII--SAQGCKVDNSSLTGESEP 198
Query: 211 VSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNE- 269
+++ + EN ++ + + F T V GT +V NTG T +G++ S AS E
Sbjct: 199 QTRSPEFTHENP-LETRN-IAFFSTNCVEGTARGIVVNTGDRTVMGRIASL---ASGLEN 253
Query: 270 EDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYF---LTWEYVDGWPRNFKFSFEKCTY 326
TP+ ++ F I +I + + V +F L Y W F
Sbjct: 254 GKTPIAIEIEHF-------IHIITGVAVFLGVSFFILSLILGYT--WLEAVIF------- 297
Query: 327 YFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTG 386
+ + VA +PEGL A +T CL L ++MA+KN LV+ L +VETLG T+ ICSDKTG
Sbjct: 298 ----LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 353
Query: 387 TLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAV 446
TLT N+M V + + + G ++ D W +++I+ +
Sbjct: 354 TLTQNRMTVAHMWFDNQIHEADTTEDQSGVSF---DKSSATW---------LALSRIAGL 401
Query: 447 CNDAGVEQSGNHYVA------SGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQL 500
CN A V ++G V +G +E+AL L+C +L
Sbjct: 402 CNRA-VFKAGQENVPILKRAVAGDASESAL------------------------LKCIEL 436
Query: 501 --WNTLEQRFATLEFDRDRKSMGVLVNS-------------SSGNKKLLV-KGAVENLLE 544
+ +E R +R+ K + + NS + LLV KGA E +LE
Sbjct: 437 CLGSVMEMR------ERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILE 490
Query: 545 RSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHP- 603
R S + L+ G LD+ ++ + E+ R LGF Y DE P
Sbjct: 491 RCSSI-LIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFC--------HLYLPDEQFPE 541
Query: 604 AHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE 663
Q + N+ + L FVG++ + DPPR V A+ C++AGI+V+++TGD+ TA+
Sbjct: 542 GFQFDTDDVNFPT--DNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 599
Query: 664 AICREIGVFGAH----EDISSQ----------------SITGKEFMDIHNQK--NYLRQD 701
AI + +G+ EDI+++ + G + D+ +++ L+
Sbjct: 600 AIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYH 659
Query: 702 GGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEA 761
++F+R P+ K IV + G +VA+TGDGVND+PALK ADIGVAMGIAG++V+K+A
Sbjct: 660 TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA 719
Query: 762 SDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRY 794
+DM+L DDNF +IV V EGR I++N+K I Y
Sbjct: 720 ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 752
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 231 bits (590), Expect = 7e-65
Identities = 114/359 (31%), Positives = 185/359 (51%), Gaps = 49/359 (13%)
Query: 45 GLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLA-WYDGE 103
GL+ E KKR YG NEL + + + + + L F + L ++ AA+++ L W D
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKF-LGFFWNPLSWVMEAAAIIAIALENWVDF- 58
Query: 104 EGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPS 163
++I +L++NA +G +E+ A A+EALK+ + +A V RDGK
Sbjct: 59 -------------VIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQ-E 104
Query: 164 LSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSD 223
+ A ELVPGD+V LK+GD VPAD RL ++V+Q +LTGES V+K
Sbjct: 105 IPASELVPGDVVRLKIGDIVPADCRLF--EGDYIQVDQAALTGESLPVTK---------- 152
Query: 224 IQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGE 283
+ ++G+TV G +VT TGMNT GK + + L+K L++ G
Sbjct: 153 --KTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGH--LQKILSKIGL 208
Query: 284 VLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGL 343
L ++IGV+ + ++ F E + A+ L V IP +
Sbjct: 209 FLIVLIGVLVLIELVVL----------------FFGRGESFREGLQFALVLLVGGIPIAM 252
Query: 344 PAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVG 402
PAV++ +A+G ++A+K A+V +L ++E L ++CSDKTGTLT N++++ +++
Sbjct: 253 PAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFF 311
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 213 bits (545), Expect = 5e-64
Identities = 92/257 (35%), Positives = 142/257 (55%), Gaps = 36/257 (14%)
Query: 118 VIFLILIVNAIVGIWQESNAEKALEALKEIQSEQA-TVTRDGKKIPSLSAKELVPGDIVE 176
+I L++++NA++ +QE A KAL+ALK++ A TV RDGK+ + A ELV GDIV
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEE-EIPADELVVGDIVL 59
Query: 177 LKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTT 236
LK GD+VPAD R++ ++ V++ +LTGES V K+ + VFAGT
Sbjct: 60 LKPGDRVPADGRII---EGSLEVDESALTGESLPVEKS------------RGDTVFAGTV 104
Query: 237 VVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALV 296
V++G +VT TG +TE+GK+ + EA + TPL++ L++ ++L I+ + LV
Sbjct: 105 VLSGELKVIVTATGEDTELGKIARLVEEAKSAK--TPLQRLLDKLAKILVPIVLALAILV 162
Query: 297 WLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTR 356
+LI F A+A+ VAA PE LP + LA+G
Sbjct: 163 FLIWF-----------------FRGGDFLEALLRALAVLVAACPEALPLAVPLALAVGAG 205
Query: 357 KMAQKNALVRKLPSVET 373
++A+K LV+ L ++ET
Sbjct: 206 RLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 173 bits (439), Expect = 1e-44
Identities = 105/373 (28%), Positives = 187/373 (50%), Gaps = 44/373 (11%)
Query: 32 EECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAA 91
E K GV+ GL+ EV +R +G N+ + + +L++ FN+ + IL +
Sbjct: 21 ETLLRKLGVHET-GLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLM 79
Query: 92 VVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQ 151
VS++ ++E T ++I L+++ + ++G QES AE+A ALK +
Sbjct: 80 GVSYLTD--------DLEAT-----VIIALMVLASGLLGFIQESRAERAAYALKNMVKNT 126
Query: 152 ATVTRDGKKIPS-----LSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTG 206
ATV R + + + LVPGD++EL GD +PAD R++ ++ + + Q +LTG
Sbjct: 127 ATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVI--SARDLFINQSALTG 184
Query: 207 ESEAVSKTVKTV-PENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEA 265
ES V K V+ + +I ++ + F GT V++G +V TG +T G +
Sbjct: 185 ESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA--- 241
Query: 266 SQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDG-WPRNFKFSFEKC 324
++ T K + ++L + V+ +V +IN + G W F F
Sbjct: 242 TERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMIN-------GLMKGDWLEAFLF----- 289
Query: 325 TYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDK 384
A+A+AV PE LP ++++ LA G M++K +V++L +++ G ++C+DK
Sbjct: 290 ------ALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDK 343
Query: 385 TGTLTTNQMAVTK 397
TGTLT +++ + K
Sbjct: 344 TGTLTQDKIELEK 356
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 1e-40
Identities = 175/791 (22%), Positives = 291/791 (36%), Gaps = 178/791 (22%)
Query: 40 VNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAW 99
GL+ G++ +R+ YG NE+E S +L+ E+ + V V S V+ W
Sbjct: 134 AGHSNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEV----LHPFYVFQVFS-VILW 187
Query: 100 YDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEI--QSEQATVTRD 157
E + L I + +I + K ++ L+++ + + V R+
Sbjct: 188 LLDE--------YYYYSLCIVFMSST-SISLSVYQI--RKQMQRLRDMVHKPQSVIVIRN 236
Query: 158 GKKIPSLSAKELVPGDIVELKV--GDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTV 215
GK + +++ ELVPGDIV + +P D LL S + V + LTGES V K
Sbjct: 237 GKWVT-IASDELVPGDIVSIPRPEEKTMPCDSVLL---SGSCIVNESMLTGESVPVLKFP 292
Query: 216 KTVPENSD----IQG--KKCMVFAGTTVV-------NGTCTCLVTNTGMNTEIGK-VHSQ 261
+ D + KK ++F GT ++ + C +V TG +T G+ V S
Sbjct: 293 IPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI 352
Query: 262 IHEASQNEEDTPLKKKLNQ--FGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKF 319
++ P K + F +L + + + ++ T + R
Sbjct: 353 LYP-------KPRVFKFYKDSFKFILFLAVLALIGFIY--------TIIELIKDGRPLGK 397
Query: 320 SFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTV 379
+ I V P LPA ++ + ++ +K + G V
Sbjct: 398 IILRSLDIITIVV-------PPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDV 450
Query: 380 ICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQT 439
C DKTGTLT + + + V S + ++ PS
Sbjct: 451 CCFDKTGTLTEDGLDLRG-VQGLSGNQEFLKIVTEDSSLKPSI----------------- 492
Query: 440 IAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMG--FPEGVNHGSSSSPEDVLRC 497
K A C+ + + G G P + K M E G E +S V+R
Sbjct: 493 THKALATCH-SLTKLEG---KLVGDPLD---KKMFEATGWTLEEDDESAEPTSILAVVRT 545
Query: 498 CQLWNTLE--QRFATLEFDRDRKSMGVLVNSSSGNKKLL-VKGAVENLLERSSFVQLLDG 554
L +RF +F + M V+V+++ VKGA E + S +
Sbjct: 546 DDPPQELSIIRRF---QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETV--- 599
Query: 555 SVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNY 614
+L+S + R L AYK + Q + +
Sbjct: 600 ------PSDYQEVLKSY---TREGYRVLALAYK-----------ELPKLTLQKAQD-LSR 638
Query: 615 SSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG-VFG 673
++ES L F+G + +P + + ++ I++ K A IR ++ITGDN TA + RE G V
Sbjct: 639 DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNP 698
Query: 674 AH--------------------EDISSQS----------------------------ITG 685
++ E I S ++G
Sbjct: 699 SNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSG 758
Query: 686 KEFMDI-HNQKNYLRQDGGLL-----FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAP 739
K F + + L + LL F+R P K+ +V LL++ V M GDG ND
Sbjct: 759 KAFAVLQAHSPELLLR---LLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCG 815
Query: 740 ALKLADIGVAM 750
ALK AD+G+++
Sbjct: 816 ALKQADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 1e-40
Identities = 88/284 (30%), Positives = 146/284 (51%), Gaps = 31/284 (10%)
Query: 513 FDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQ 572
FD +R+ M V+V ++ + +L+ KGA+E +L S V+ +G +V LD I +
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTD 507
Query: 573 EMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSI-ESRLVFVGMVGLRD 631
++ LR + A K PA + +Y ES L+ G + D
Sbjct: 508 TLNRQGLRVVAVATKY-------------LPARE-----GDYQRADESDLILEGYIAFLD 549
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGK--EFM 689
PP+E A++ KA+G+ V ++TGD++ A +C E+G+ ++ + G E +
Sbjct: 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL--DAGEV----LIGSDIETL 603
Query: 690 DIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749
N + LF+R P HK+ IV LLK +G VV GDG+NDAPAL+ ADIG++
Sbjct: 604 SDDELANLAERT--TLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGIS 661
Query: 750 MGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIR 793
+ ++A+EA+D++L + + + V EGR + NM +I+
Sbjct: 662 VD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIK 704
|
Length = 902 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 1e-38
Identities = 106/357 (29%), Positives = 181/357 (50%), Gaps = 42/357 (11%)
Query: 45 GLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEE 104
GL+ EV+ RE +G NEL + + + + + +L + +S+
Sbjct: 67 GLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------ 120
Query: 105 GGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTR-DGKKIPS 163
++ A VI L++ ++ ++ QE+ + KA +ALK + S ATV R K +
Sbjct: 121 ----DLFAAG---VIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGEN 173
Query: 164 ----LSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTV- 218
+ +LVPGDI++L GD +PAD+R+L + + V Q SLTGES V K T
Sbjct: 174 GWLEIPIDQLVPGDIIKLAAGDMIPADLRIL--QARDLFVAQASLTGESLPVEKFATTRQ 231
Query: 219 PENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKL 278
PE+S+ + F GT VV+GT +V TG NT G++ ++ E Q+ E ++ +
Sbjct: 232 PEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSE--QDSEPNAFQQGI 289
Query: 279 NQFGEVLTMIIGVICALVWLINVKYFLTWEYVDG-WPRNFKFSFEKCTYYFEIAVALAVA 337
++ +L + V+ +V LIN Y G W F A+++AV
Sbjct: 290 SRVSWLLIRFMLVMAPVVLLIN-------GYTKGDWWEAALF-----------ALSVAVG 331
Query: 338 AIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMA 394
PE LP ++T+ LA G K++++ +V++L +++ G ++C+DKTGTLT +++
Sbjct: 332 LTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIV 388
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 153 bits (389), Expect = 2e-38
Identities = 84/289 (29%), Positives = 149/289 (51%), Gaps = 27/289 (9%)
Query: 506 QRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRD 565
++ + FD DR+ + V+V + + +L+ KGAVE +L + + G+VV L + +
Sbjct: 407 KKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKS 465
Query: 566 LILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSI-ESRLVFV 624
+ EM+ +R + A K T E +++ E +L+
Sbjct: 466 ELQDMTAEMNRQGIRVIAVATK-------TLKVGEA-----------DFTKTDEEQLIIE 507
Query: 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSIT 684
G +G DPP+E ++AI GI V V+TGDN+ IC+E+G+ A+ D +
Sbjct: 508 GFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI-DAN-DF----LL 561
Query: 685 GKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 744
G + ++ +++ +F+R P K I+ LLK+ G V GDG+NDAPAL+ A
Sbjct: 562 GADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKA 621
Query: 745 DIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIR 793
D+G+++ A ++AKEASD++L + + + V EGR+ + N+ +++
Sbjct: 622 DVGISVDTA-ADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLK 669
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 1e-37
Identities = 118/371 (31%), Positives = 181/371 (48%), Gaps = 60/371 (16%)
Query: 45 GLSVGEVKKRREIYGYNELEKHEGT--SIFQLILEQFNDTLVRILLVAAVVSFV----LA 98
GL+ + +R + YG NE+ HE ++ QL L+ FN+ + +L+V A +SF L
Sbjct: 45 GLTEEDAAERLQRYGPNEV-AHEKPPHALVQL-LQAFNNPFIYVLMVLAAISFFTDYWLP 102
Query: 99 WYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDG 158
GEE T ++I +++++ ++ WQE + KA EALK + ATV R G
Sbjct: 103 LRRGEE------TDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRG 156
Query: 159 --------KKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEA 210
++IP +ELVPGDIV L GD +PAD+RL+ S + + Q LTGE+
Sbjct: 157 HAGAEPVRREIP---MRELVPGDIVHLSAGDMIPADVRLI--ESRDLFISQAVLTGEALP 211
Query: 211 VSK-------TVKTVPENSDIQGK----KCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259
V K K+ +D +G + F GT VV+GT T +V TG T G +
Sbjct: 212 VEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLA 271
Query: 260 SQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDG-WPRNFK 318
I T + +N +L + V+ +V LIN + G W
Sbjct: 272 KSI---VGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN-------GFTKGDWLEALL 321
Query: 319 FSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTT 378
F A+A+AV PE LP ++++ LA G MA++ +V++L +++ G
Sbjct: 322 F-----------ALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMD 370
Query: 379 VICSDKTGTLT 389
V+C+DKTGTLT
Sbjct: 371 VLCTDKTGTLT 381
|
Length = 903 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 1e-37
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 32/167 (19%)
Query: 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQS 682
VG++ L D R + ++AI KA GI+V+++TGDN+ TAEAI +E+G+
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVR------- 580
Query: 683 ITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 742
LL P K EIVR L+ +G VAM GDG+NDAPAL
Sbjct: 581 -------------------AELL-----PEDKAEIVRELQAEGRKVAMVGDGINDAPALA 616
Query: 743 LADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK 789
AD+G+AMG +GT+VA EA+D+VL D+ + A+ R+ +K
Sbjct: 617 AADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 2e-31
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 62/282 (21%)
Query: 523 LVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCL 582
+ + +G + + KGA + +L L D ++ + E++S R L
Sbjct: 372 VEDPETGKRFKVTKGAPQVIL------DLCDNKKEIEEKVEEKV-----DELASRGYRAL 420
Query: 583 GFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIE 642
G A D+ + F+G++ L DPPR + ++ IE
Sbjct: 421 GVARTDEEGRWH----------------------------FLGLLPLFDPPRHDTKETIE 452
Query: 643 DCKAAGIRVMVITGDNKNTAEAICREIG----VFGAH---EDISSQSITGK--EFMDIHN 693
+ G+ V ++TGD+ A+ R +G ++ A + + + E +
Sbjct: 453 RARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMV---- 508
Query: 694 QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIA 753
DG F+ P HK EIV +L++ G +V MTGDGVNDAPALK AD+G+A +A
Sbjct: 509 ----EDADG---FAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIA--VA 559
Query: 754 G-TEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRY 794
G T+ A+ A+D+VL + IV A+ E R I+ MK+++ Y
Sbjct: 560 GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIY 601
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 3e-31
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 35/202 (17%)
Query: 589 DLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAG 648
+L + + + +++ L+ G++ LRD R E ++AI K AG
Sbjct: 343 ELAIEPISASPDLLNEGESQGKTVVFVAVDGELL--GVIALRDQLRPEAKEAIAALKRAG 400
Query: 649 -IRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707
I+++++TGDN++ AEA+ E+G+ H ++
Sbjct: 401 GIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------------------- 432
Query: 708 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLA 767
P K IV+ L+E+G VVAM GDG+NDAPAL AD+G+AMG AG++VA EA+D+VL
Sbjct: 433 ---PEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLL 488
Query: 768 DDNFGTIVAAVGEGRSIYNNMK 789
+D+ ++ A+ R +K
Sbjct: 489 NDDLSSLPTAIDLSRKTRRIIK 510
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 1e-29
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 45/324 (13%)
Query: 81 DTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKA 140
DTLV +A + ++ + Y E A ++IFL L+ + + A +A
Sbjct: 150 DTLV---ALATIGAYAYSLYATLFPVYFEEAA----MLIFLFLLGRYLEA-RAKGRARRA 201
Query: 141 LEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVE 200
+ AL ++ + ATV R + + +E+ GDIV ++ G+++P D ++ +SS V+
Sbjct: 202 IRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS---VD 258
Query: 201 QGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHS 260
+ LTGES V K G + VFAGT ++G+ T VT G +T + ++
Sbjct: 259 ESMLTGESLPVEKKP----------GDE--VFAGTVNLDGSLTIRVTRVGADTTLARIIR 306
Query: 261 QIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFS 320
+ EA P+++ ++ ++ VI AL F W G
Sbjct: 307 LVEEAQ--SSKAPIQRLADRVASYFVPVVLVIAALT-------FALWPLFGGGDWET--- 354
Query: 321 FEKCTYYFEIAVALAVAAIPEGLPAVITTCLAL--GTRKMAQKNALVRKLPSVETLGCTT 378
A+A+ V A P L + T A+ G + A++ L++ ++E L
Sbjct: 355 ------ALYRALAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEALERLAKVD 406
Query: 379 VICSDKTGTLTTNQMAVTKLVAVG 402
+ DKTGTLT + VT +VA+
Sbjct: 407 TVVFDKTGTLTEGKPEVTDVVALD 430
|
Length = 713 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 1e-29
Identities = 199/831 (23%), Positives = 299/831 (35%), Gaps = 198/831 (23%)
Query: 116 PLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIV 175
PL +LIV AI ++ + KE+ + V + + K+L GDIV
Sbjct: 56 PLAF--VLIVTAIKEAIEDI---RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIV 110
Query: 176 ELKVGDKVPADMRLLRLTSST--VRVEQGSLTGES-----EAVSKTVKTVPENSDIQGKK 228
++K +++PAD+ LL + VE +L GE+ +A+ +T + + + DI+
Sbjct: 111 KVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEET-QKMLDEDDIKNFS 169
Query: 229 CMV-----------FAGTTVVNGT------------CTCLVTNTGMNTEIGKVHSQIHE- 264
+ F G +NG C + NT IG V H+
Sbjct: 170 GEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDW--VIGVVVYTGHDT 227
Query: 265 -ASQNEEDTPLK-----KKLNQ-----FGEVLTM-IIGVICALVWL----INVKYFLTWE 308
+N P K K+LN F + + +I + A +W ++ Y
Sbjct: 228 KLMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDV 287
Query: 309 YVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ-------- 360
N FSF + L + IP I+ ++L K Q
Sbjct: 288 SERNAAANGFFSFLT-------FLILFSSLIP------ISLYVSLELVKSVQAYFINSDL 334
Query: 361 -----KN---ALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGT----- 407
K A VR E LG I SDKTGTLT N M K G G
Sbjct: 335 QMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394
Query: 408 ---LRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKIS--------------AVCNDA 450
+R + N + +E +D L + K + A+C+
Sbjct: 395 KDGIRE-RLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTV 453
Query: 451 --GVEQSGNH---YVASGMPTEAALKVMVEKMGFP-EGVNHGSSSSPEDVLRCCQLWNTL 504
G Y A+ P EAAL +GF S S ++ + + L
Sbjct: 454 VPEFNDDGPEEITYQAAS-PDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEIL 512
Query: 505 EQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSR 564
LEF+ DRK M V+V + G KLL KGA + +R L
Sbjct: 513 N----VLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKR-------------LSSGGN 555
Query: 565 DLI---LQSLQEMSSTALRCLGFAYKD-DLREFETYDGDEDHPAHQLLLNPTN-----YS 615
+ + L+ +S LR L AY++ E+E ++ + + A L +
Sbjct: 556 QVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNE-ASTALTDREEKLDVVAE 614
Query: 616 SIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAI---CR----- 667
SIE L+ +G + D +E V + IE + AGI++ V+TGD TA I CR
Sbjct: 615 SIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRN 674
Query: 668 -EIGVFGAHEDISSQSITGKEF-------MDIHNQKNYLRQ--------DG--------- 702
E V + S T + N L DG
Sbjct: 675 MEQIVITS----DSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDE 730
Query: 703 --------------GLLFSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIG 747
++ R P K ++VRL+K+ G+ GDG ND ++ AD+G
Sbjct: 731 ELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790
Query: 748 VAMGIAGTE--VAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGF 796
V GI+G E A ASD + F T + V GR Y + I Y F
Sbjct: 791 V--GISGKEGMQAVMASDFAIGQFRFLTKLLLV-HGRWSYKRISKMILYFF 838
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 7e-29
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 511 LEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQS 570
L FD R+ + V+V + G L+ KGAVE +L ++ V+ +V LD+ R+ +L
Sbjct: 445 LPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLAL 503
Query: 571 LQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESR-LVFVGMVGL 629
+ ++ R L A + E G+ YS+ + R LV G +
Sbjct: 504 AEAYNADGFRVLLVATR------EIPGGESRAQ----------YSTADERDLVIRGFLTF 547
Query: 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFM 689
DPP+E AI + G+ V V+TGDN ICRE+G+ + + G E
Sbjct: 548 LDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGL------EPGEPLLGTEIE 601
Query: 690 DIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749
+ + + +F++ P K +++ L+ +G V GDG+NDAPAL+ AD+G++
Sbjct: 602 AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGIS 661
Query: 750 MGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRY 794
+ +G ++AKE++D++L + + + V +GR + N+ I+Y
Sbjct: 662 VD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNI---IKY 702
|
Length = 903 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 1e-28
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 32/166 (19%)
Query: 624 VGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSI 683
G++ L D + E ++ I+ K GI +++TGDN+ TA+A+ +E+G+ E++
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI----ENV----- 456
Query: 684 TGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 743
+ P K +++ L+E G+VVAM GDG+NDAPAL
Sbjct: 457 ----------------------RAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQ 494
Query: 744 ADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK 789
AD+G+A+G AGT+VA EA+D+VL ++ + A+ R +K
Sbjct: 495 ADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 3e-28
Identities = 62/296 (20%), Positives = 121/296 (40%), Gaps = 36/296 (12%)
Query: 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVP 171
+E ++ + ++ + + A AL AL + A V + + +EL
Sbjct: 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76
Query: 172 GDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMV 231
GDIV ++ G+++P D ++ S V++ +LTGES V K G + V
Sbjct: 77 GDIVIVRPGERIPVDGVVISGESE---VDESALTGESMPVEKKE----------GDE--V 121
Query: 232 FAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGV 291
FAGT +G+ T VT G ++ + ++ + EA P+++ ++ +
Sbjct: 122 FAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEA--QSSKAPIQRLADRIASYYVPAVLA 179
Query: 292 ICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCL 351
I L +++ W + + + A+A+ V A P L +
Sbjct: 180 IALLTFVV-------WLALGAL-----GALYR-------ALAVLVVACPCALGLATPVAI 220
Query: 352 ALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGT 407
+ A++ L++ ++E L + DKTGTLTT + V + + + +
Sbjct: 221 LVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDIEPLDDASIS 276
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 6e-28
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 32/162 (19%)
Query: 623 FVGMVGLRDPPREEVRQAIEDCKAAGI-RVMVITGDNKNTAEAICREIGVFGAHEDISSQ 681
++G + L D PR + +AI + KA GI +V+++TGD + AE + RE+G+ H ++
Sbjct: 353 YLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-- 410
Query: 682 SITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 741
P K EIV+ L+E VAM GDG+NDAPAL
Sbjct: 411 -----------------------------PEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 742 KLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRS 783
AD+G+AMG +G++VA E +D+VL +D+ + A+ R
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARR 483
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 3e-26
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 57/329 (17%)
Query: 81 DTLVRI-LLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAE- 138
DTL+ + VA S V + G T F ++ +++ G W E A+
Sbjct: 21 DTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILL----GRWLEMLAKG 76
Query: 139 ---KALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSS 195
AL L ++Q AT+ D +I + + L PGDIV + G+K+P D ++ S
Sbjct: 77 RASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES- 135
Query: 196 TVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEI 255
V++ +TGES V K V V AGT G+ T TG +T +
Sbjct: 136 --EVDESLVTGESLPVPKKVGDP------------VIAGTVNGTGSLVVRATATGEDTTL 181
Query: 256 GKVHSQIHEASQNEEDTPLKKKLNQFGEVLT-------MIIGVICALVWLINVKYFLTWE 308
++ + +A Q+ K + + + + + I +I ++WLI
Sbjct: 182 AQIVRLVRQAQQS------KAPIQRLADKVAGYFVPVVIAIALITFVIWLI--------- 226
Query: 309 YVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKL 368
+F F+ E+AV + + A P L T +A+ T A+ L++
Sbjct: 227 ----LGADFVFA-------LEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDG 275
Query: 369 PSVETLGCTTVICSDKTGTLTTNQMAVTK 397
++E + DKTGTLT + VT
Sbjct: 276 DALERAANIDTVVFDKTGTLTQGKPTVTD 304
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 2e-24
Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 52/318 (16%)
Query: 84 VRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEA 143
V +L+ A + A GE E ++ L+ + + + A +AL+A
Sbjct: 1 VDLLMALAALG---AVAIGEYL---------EGALLLLLFSIGETLEEYASGRARRALKA 48
Query: 144 LKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGS 203
L E+ + A V R G + ++ +EL GD+V +K G++VP D +L TS+ V++ +
Sbjct: 49 LMELAPDTARVLRGGS-LEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST---VDESA 104
Query: 204 LTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
LTGES V K VFAG ++G T +VT ++ I K+ + +
Sbjct: 105 LTGESVPVEK------------APGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVE 152
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
EA ++ +++F T ++ I +WL+ ++
Sbjct: 153 EAQ--SRKAKTQRFIDRFARYYTPVVLAIALAIWLVP------------------GLLKR 192
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLAL--GTRKMAQKNALVRKLPSVETLGCTTVIC 381
++ A+ L V A P L VI+ A A+ L++ ++E L +
Sbjct: 193 WPFWVYRALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVA 250
Query: 382 SDKTGTLTTNQMAVTKLV 399
DKTGTLTT + V +V
Sbjct: 251 FDKTGTLTTGRPKVVDVV 268
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 3e-20
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 32/149 (21%)
Query: 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQ 681
+G++ L+D + +++ + + GI+ ++ITGDN TA AI E GV
Sbjct: 437 RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---------- 486
Query: 682 SITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 741
+F+ + A P K ++R + +G +VAMTGDG NDAPAL
Sbjct: 487 ----DDFI-----------------AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPAL 525
Query: 742 KLADIGVAMGIAGTEVAKEASDMVLADDN 770
AD+GVAM +GT+ AKEA++MV D N
Sbjct: 526 AQADVGVAMN-SGTQAAKEAANMVDLDSN 553
|
Length = 681 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 95.1 bits (237), Expect = 5e-20
Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 47/194 (24%)
Query: 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQ 681
+G++ L+D R + RQAI + KA GI+ +++TGDN A AI E+G
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELG----------- 606
Query: 682 SITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 741
+D GLL P K + V L + +AM GDG+NDAPA+
Sbjct: 607 -------IDFR---------AGLL-----PEDKVKAVTELNQH-APLAMVGDGINDAPAM 644
Query: 742 KLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLEN 801
K A IG+AMG +GT+VA E +D L + + + R+ + N IR +N
Sbjct: 645 KAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHAN----IR------QN 693
Query: 802 HCLSLELNLDKAIF 815
++L L KAIF
Sbjct: 694 ITIALGL---KAIF 704
|
Length = 741 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 1e-19
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
VEE + G + + GL+ E ++R E YG NEL + + S++++ L QF D LV
Sbjct: 1 WHTLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 86 ILLVAAVVS 94
ILL+AA+VS
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 3e-19
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 32/148 (21%)
Query: 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQS 682
+G++ L+D + +++ + + GI+ ++ITGDN TA AI E GV D
Sbjct: 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-----D----- 485
Query: 683 ITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 742
+F+ + A P K ++R + +G +VAMTGDG NDAPAL
Sbjct: 486 ----DFL-----------------AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALA 524
Query: 743 LADIGVAMGIAGTEVAKEASDMVLADDN 770
AD+GVAM +GT+ AKEA +MV D N
Sbjct: 525 QADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 5e-19
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 27 WAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRI 86
A +EE E+ + + GLS E +R E YG NEL + TS L QF++ L+ I
Sbjct: 5 HALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYI 64
Query: 87 LLVAAVVSFVL 97
LL AAV+S +L
Sbjct: 65 LLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 90.2 bits (224), Expect = 2e-18
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 37/174 (21%)
Query: 624 VGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSI 683
++ +RDP R + A++ AG R++++TGDN TA AI +E G+ + I
Sbjct: 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI--------DEVI 693
Query: 684 TGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 743
G P K E ++ L+ G VAM GDG+NDAPAL
Sbjct: 694 AG-----------------------VLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQ 730
Query: 744 ADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK-----AFI 792
AD+G+AMG G++VA E + + L + + A+ R+ NMK AFI
Sbjct: 731 ADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFI 783
|
Length = 834 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 89.2 bits (221), Expect = 3e-18
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSIT 684
G++ L+D + +++ + GI+ ++ITGDN+ TA AI E GV
Sbjct: 439 GVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----------- 487
Query: 685 GKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 744
+ A P K ++R + +G++VAMTGDG NDAPAL A
Sbjct: 488 --------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQA 527
Query: 745 DIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSI 784
D+GVAM +GT+ AKEA++MV D + ++ V G+ +
Sbjct: 528 DVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQL 566
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 6e-18
Identities = 81/304 (26%), Positives = 134/304 (44%), Gaps = 50/304 (16%)
Query: 106 GEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLS 165
G + I A E ++ L+ ++ + + S A + + AL + E AT RDG++ ++
Sbjct: 199 GALFIGATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGERE-EVA 257
Query: 166 AKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQ 225
+L PGD++E+ G ++PAD +LL S ++ +LTGES V +
Sbjct: 258 IADLRPGDVIEVAAGGRLPADGKLL---SPFASFDESALTGESIPVERA----------T 304
Query: 226 GKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVL 285
G+K AG T V+ T V + + I ++ I EA E P+++ +++F +
Sbjct: 305 GEKVP--AGATSVDRLVTLEVLSEPGASAIDRILHLIEEAE--ERRAPIERFIDRFSRIY 360
Query: 286 TMIIGVICALVWLINVKYF----LTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPE 341
T I ++ LV L+ F W Y + L + P
Sbjct: 361 TPAIMLVALLVILVPPLLFAAPWQEWIYR--------------------GLTLLLIGCPC 400
Query: 342 GL----PAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTK 397
L PA IT+ LA R + AL++ ++E LG T + DKTGTLT + VT
Sbjct: 401 ALVISTPAAITSGLAAAAR----RGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTD 456
Query: 398 LVAV 401
+
Sbjct: 457 IHPA 460
|
Length = 741 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 79.6 bits (196), Expect = 4e-17
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 587 KDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKA 646
+++L + LL LV +G++ L DP R+A+++ K
Sbjct: 49 REELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKE 108
Query: 647 AGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF 706
AGI++ ++TGDN+ TA AI R +G+F A ++ + + K
Sbjct: 109 AGIKLAILTGDNRLTANAIARLLGLFDA-------LVSADLYGLVGVGK----------- 150
Query: 707 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 745
+P+ + + L E V M GDGVND PA K A
Sbjct: 151 --PDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 3e-16
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 20/108 (18%)
Query: 445 AVCNDAGV--EQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWN 502
A+CNDA + N G PTE+AL V EK+G +
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGI-----------------DVEELR 43
Query: 503 TLEQRFATLEFDRDRKSMGVLVNSSSGNKKLL-VKGAVENLLERSSFV 549
R A + F+ +RK M + + L VKGA E +LER S +
Sbjct: 44 ARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 75.9 bits (186), Expect = 5e-14
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 32/163 (19%)
Query: 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQ 681
+G++ L+D ++ + + + + GI ++ TGDN+ TA I +E GV
Sbjct: 431 EILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV---------- 480
Query: 682 SITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 741
+ +P K ++R + G +VAMTGDG NDAPAL
Sbjct: 481 ---------------------DRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPAL 519
Query: 742 KLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSI 784
A++G+AM +GT AKEA++++ D N ++ V G+ +
Sbjct: 520 AEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQL 561
|
Length = 673 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 5e-11
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 506 QRFATL---EFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQY 562
QRF L EFD DRK M V++ K+ VKGA +S ++D S
Sbjct: 601 QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGA------DTSMFSVIDRS------L 648
Query: 563 SRDLILQS---LQEMSSTALRCLGFAYKD-DLREFETYDGDEDHPAHQLL----LNPTNY 614
+ ++I + L SS LR L ++ + EFE + + + L+ L
Sbjct: 649 NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVA 708
Query: 615 SSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAI 665
S++E+ L +G + D ++ V +AIE + AGI+V V+TGD + TA +I
Sbjct: 709 SNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 64.7 bits (157), Expect = 1e-10
Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 40/291 (13%)
Query: 119 IFLILIVNAIVGIWQESNAE----KALEALKEIQSEQAT--VTRDGKKIPSLSAKELVPG 172
IF+IL++ + + E+ AE AL++ Q+E + +DG + A +L G
Sbjct: 68 IFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGS-YEMIDASDLKKG 126
Query: 173 DIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVF 232
IV + G+++P D +++ V++ ++TGES V K + G V
Sbjct: 127 HIVRVATGEQIPNDGKVI---KGLATVDESAITGESAPVIK---------ESGGDFDNVI 174
Query: 233 AGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVI 292
GT+V + +T+ ++ + K+ + A++ + TP ++ F ++T+ I +
Sbjct: 175 GGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKK--TP--NEIALFTLLMTLTIIFL 230
Query: 293 CALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLA 352
++ + + FL NF S + +ALAV IP + +++
Sbjct: 231 VVILTMYPLAKFL----------NFNLSIA-------MLIALAVCLIPTTIGGLLSAIGI 273
Query: 353 LGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGS 403
G ++ Q N L + SVET G V+ DKTGT+T + V S
Sbjct: 274 AGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS 324
|
Length = 673 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 7e-10
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIH 692
V++A+++ K GI++ + T ++ + E+G+ + + IT +
Sbjct: 25 LYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPV----ITSNGAAIYY 80
Query: 693 NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK-LADIGVAM 750
++ G + P ++LL D E V M GD +ND K +GVA+
Sbjct: 81 PKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 2e-09
Identities = 76/320 (23%), Positives = 131/320 (40%), Gaps = 54/320 (16%)
Query: 89 VAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAE---KAL-EAL 144
V ++++ L + GG F L I +IL + + E+ AE KA ++L
Sbjct: 40 VGSILTTFLTIFPDLFGGTGGSRLFN--LAITIILWFTVLFANFAEAVAEGRGKAQADSL 97
Query: 145 KEIQSE-QATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGS 203
++ ++E A + R I + A EL GDIV ++ G+ +P+D ++ +S V++ +
Sbjct: 98 RKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS---VDESA 154
Query: 204 LTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263
+TGES V + + G V GT V++ +T T + ++ + +
Sbjct: 155 ITGESAPVIR---------ESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVE 205
Query: 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEK 323
A + + TP + L LT+I + A ++ Y G +
Sbjct: 206 GAERQK--TPNEIALTILLSGLTLIFLLAVATLYPFA-------IYSGGGAASVT----- 251
Query: 324 CTYYFEIAVALAVAAIPEGLPAVITTCLAL-------GTRKMAQKNALVRKLPSVETLGC 376
+ VAL V IP TT L G ++ Q N + +VE G
Sbjct: 252 ------VLVALLVCLIP-------TTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGD 298
Query: 377 TTVICSDKTGTLTT-NQMAV 395
+ DKTGT+T N+ A
Sbjct: 299 VDTLLLDKTGTITLGNRQAS 318
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 5e-09
Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 38/291 (13%)
Query: 117 LVIFLILIVNAIVGIWQESNAE---KA-LEALKEIQSEQ-ATVTRDGKKIPSLSAKELVP 171
+I IL + + + E+ AE KA ++LK + A + RD I + A +L
Sbjct: 67 AIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKK 126
Query: 172 GDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMV 231
GDIV ++ GD +P D ++ +S V++ ++TGES V K D V
Sbjct: 127 GDIVLVEAGDVIPCDGEVIEGVAS---VDESAITGESAPVIKE-----SGGDFAS----V 174
Query: 232 FAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGV 291
GT +++ T T + ++ + + A + + TP + L LT++ +
Sbjct: 175 TGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRK--TPNEIALTILLIALTLVFLL 232
Query: 292 ICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCL 351
+ A +W F + G + + VAL V IP + +++
Sbjct: 233 VTATLWP-----FAAYG---GNAISVT-----------VLVALLVCLIPTTIGGLLSAIG 273
Query: 352 ALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVG 402
G ++ N + +VE G + DKTGT+T ++ +
Sbjct: 274 IAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQ 324
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 31/142 (21%), Positives = 48/142 (33%), Gaps = 31/142 (21%)
Query: 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFM 689
+ + KAAG +V++I+G E I +G+
Sbjct: 75 FLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI------------------ 116
Query: 690 DIHNQKNYLRQDGGLLFSRAE------PRHKQEIVRLLKEDG----EVVAMTGDGVNDAP 739
+ N L D G L R + + L E G E VA GD ND P
Sbjct: 117 -DYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLEETVAY-GDSANDLP 174
Query: 740 ALKLADIGVAMGIAGTEVAKEA 761
L+ A + +A+ ++ A
Sbjct: 175 MLEAAGLPIAVN-PKPKLRALA 195
|
Length = 212 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 6e-06
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 706 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA-MGIAGT-EVAKEASD 763
F+ A+P K +I+R LK+ E V M G+G ND AL+ AD+G+ + G E +D
Sbjct: 74 FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTAD 133
Query: 764 MVLAD 768
+VL +
Sbjct: 134 VVLKE 138
|
Length = 152 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 4e-05
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 37/260 (14%)
Query: 139 KALEALKEIQSEQA-TVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTV 197
KALE L ++ A VT +G+K L+ ++ PG ++ L GD+VP D +T
Sbjct: 312 KALEKLLDLTPPTARVVTDEGEKSVPLA--DVQPGMLLRLTTGDRVPVDG---EITQGEA 366
Query: 198 RVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGK 257
+++ LTGE K V AGT V +G+ + G +T + +
Sbjct: 367 WLDEAMLTGEPIPQQKGEGDS------------VHAGTVVQDGSVLFRASAVGSHTTLSR 414
Query: 258 VHSQIHEA-SQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRN 316
+ + +A S E L K++ + ++I ++ A +W YF P
Sbjct: 415 IIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIW-----YFFG-------PA- 461
Query: 317 FKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGC 376
+ Y IA + + A P L + G + A+ LVR +++
Sbjct: 462 -----PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRAST 516
Query: 377 TTVICSDKTGTLTTNQMAVT 396
+ DKTGTLT + V
Sbjct: 517 LDTLVFDKTGTLTEGKPQVV 536
|
Length = 834 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 23/102 (22%)
Query: 674 AHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKE-----DGEVV 728
E+ S +G ++I + K ++ L E +V+
Sbjct: 165 ELEENVSVVSSGPYSIEITAKGV----------------SKGSALQSLAEALGISLEDVI 208
Query: 729 AMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
A GDG+ND L+ A GVAMG A E K +D V +N
Sbjct: 209 AF-GDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDSNN 248
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 9e-05
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 717 IVRLLKEDG----EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFG 772
+ L K G EV+A GDG ND L+LA +GVAMG A + K A+D V +N
Sbjct: 191 LKALAKHLGIDLEEVIAF-GDGENDIEMLELAGLGVAMGNA-SPEVKAAADYVTGSNNED 248
Query: 773 TI 774
+
Sbjct: 249 GV 250
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 3e-04
Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 66/288 (22%)
Query: 167 KELVPGDIVELKVGDKVPADMRLLRLTSST--VRVEQGSLTGESE-----AVSKTVKTVP 219
K++ G+I++++ D +P DM LL + T V+ +L GES A +T+ +P
Sbjct: 187 KDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIP 246
Query: 220 E----------------------NSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGK 257
E N ++ GK+ + ++ G C + NT +
Sbjct: 247 EKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRG---CELKNTAWAIGVAV 303
Query: 258 VHSQIHEASQNEEDTPLKKK------------LNQFGEVLTMIIGVICALVWLINVK--- 302
+ +A N P K+ L+ F L I+ V CA VWL +
Sbjct: 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSV-CAAVWLRRHRDEL 362
Query: 303 ----YFLTWEYVDGWPRNFK---------FSFEKCTYYFEIAVALAVAAIPEGLPAVITT 349
++ ++ +G P+N+ F+F F+I + +++ I L V
Sbjct: 363 DTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLY-ISMELVRVGQA 421
Query: 350 CLALGTRKMAQKNA----LVRKLPSVETLGCTTVICSDKTGTLTTNQM 393
+ +M + + R L E LG + SDKTGTLT N+M
Sbjct: 422 YFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKM 469
|
Length = 1178 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 4e-04
Identities = 73/325 (22%), Positives = 125/325 (38%), Gaps = 60/325 (18%)
Query: 86 ILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAE---KAL- 141
++ V ++++ +L F L I L L + + E+ AE KA
Sbjct: 38 VVEVGSILTTILTIAPLLFQSGGP-AGFN--LAITLWLWFTVLFANFAEALAEGRGKAQA 94
Query: 142 EALKEIQSE-QATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVE 200
++L+ + + A R+ + A EL GDIV ++ G+ +PAD ++ +S V+
Sbjct: 95 DSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVAS---VD 151
Query: 201 QGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHS 260
+ ++TGES V + + G V GT V++ +T + + ++ +
Sbjct: 152 ESAITGESAPVIR---------ESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIA 202
Query: 261 QIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFS 320
+ A + TP + L LT+I ++ A + Y G
Sbjct: 203 LVEGA--KRQKTPNEIALTILLAGLTIIFLLVVATLPPFA-------AYSGG-------- 245
Query: 321 FEKCTYYFEIAV--ALAVAAIPEGLPAVITTCLAL-------GTRKMAQKNALVRKLPSV 371
I V AL V IP TT L G ++ Q N + +V
Sbjct: 246 ------ALSITVLVALLVCLIP-------TTIGGLLSAIGIAGMDRVLQANVIATSGRAV 292
Query: 372 ETLGCTTVICSDKTGTLTT-NQMAV 395
E G + DKTGT+T N+ A
Sbjct: 293 EAAGDVDTLLLDKTGTITLGNRQAS 317
|
Length = 679 |
| >gnl|CDD|233435 TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDI 691
R R+ I K GI ++++G E + ++G+ +D+ + +
Sbjct: 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGI----DDVFAN--------RL 120
Query: 692 HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEV----VAMTGDGVNDAPALKLA 744
N L E K ++++ L E+ ++ + GD VND P LKLA
Sbjct: 121 EFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177
|
This model represents a subfamily of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. Subfamily IA, B, C and D are distinguished from the rest of the superfamily by the presence of a variable domain between the first and second conserved catalytic motifs. In subfamilies IA and IB, this domain consists of an alpha-helical bundle. It was necessary to model these two subfamilies separately, breaking them at a an apparent phylogenetic bifurcation, so that the resulting model(s) are not so broadly defined that members of subfamily III (which lack the variable domain) are included. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMV 765
EV A+ GD ND ++A GVA+ A E KEA+D V
Sbjct: 175 EVAAI-GDSENDLEMFEVAGFGVAVANA-DEELKEAADYV 212
|
Length = 230 |
| >gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 17/128 (13%)
Query: 617 IESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHE 676
+S + ++ R + D + V++++G + + + +G
Sbjct: 10 TDSDTALLLLLEALAEDRRLGLLGLSDAEELLELVVIVSGSPEPLVRPVAKALG-IDDVN 68
Query: 677 DISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVR--LLKEDGEVVAMTGDG 734
+ ++ G L + + K ++ K V GD
Sbjct: 69 VVGTELENVLVD--------------GRLTGKLDGEGKAAALKRLAQKIGRYPVVAVGDS 114
Query: 735 VNDAPALK 742
++D PALK
Sbjct: 115 ISDLPALK 122
|
Length = 122 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.004
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 634 REEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN 693
+E R+++ED ++ ++G ++NT G A D + I G + + +
Sbjct: 780 KESCRKSLEDALVMSKKLTTVSGISQNTG-------GSSAAASDPVALIIDGTSLVYVLD 832
Query: 694 Q--KNYLRQDGG----LLFSRAEPRHKQEIVRLLKE-DGEVVAMTGDGVNDAPALKLADI 746
+ L Q +L R P K IV L+K ++ GDG ND +++AD+
Sbjct: 833 SELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADV 892
Query: 747 GVAMGIAGTE--VAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGF 796
GV GI+G E A ASD + F + V G Y M I Y F
Sbjct: 893 GV--GISGQEGRQAVMASDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNF 941
|
Length = 1178 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 817 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.85 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.79 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.56 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.51 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.49 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.38 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.34 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.34 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.33 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.3 | |
| PLN02887 | 580 | hydrolase family protein | 99.28 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.26 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.25 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.2 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.2 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.19 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.1 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.09 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.09 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.07 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.05 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.03 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.0 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.88 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.8 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.79 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.7 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.66 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.59 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.54 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.51 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.48 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.4 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.37 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.37 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.28 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.25 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.18 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.15 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.15 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.15 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.13 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.08 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.07 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.01 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.0 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.98 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.96 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.95 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.89 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.87 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.86 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.75 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.69 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.68 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.64 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.61 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.6 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.56 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.53 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.52 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.51 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.46 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.42 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.4 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.38 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.29 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.29 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.28 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.27 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.18 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.13 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.05 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.05 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.99 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.98 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.88 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.87 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.87 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.86 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.85 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.83 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.76 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.76 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.68 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.64 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.62 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.61 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.6 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.54 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.45 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.43 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.39 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.38 | |
| PLN02940 | 382 | riboflavin kinase | 96.29 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.21 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.21 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.19 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.15 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.09 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.03 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.0 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 95.87 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.79 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.73 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.71 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.63 | |
| PLN02811 | 220 | hydrolase | 95.47 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.29 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.24 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.1 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.05 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.05 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 95.03 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 94.78 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 94.76 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.75 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 94.67 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 94.45 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.44 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.4 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 94.07 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.88 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.81 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.8 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 93.3 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.23 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 92.82 | |
| PLN02580 | 384 | trehalose-phosphatase | 92.31 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 91.43 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.43 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 90.81 | |
| PLN02423 | 245 | phosphomannomutase | 90.58 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 90.12 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 90.01 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 89.84 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 89.15 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 88.88 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 88.65 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 87.22 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 87.08 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 86.54 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 85.3 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 83.06 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 81.99 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 81.98 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 81.14 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 80.45 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-141 Score=1146.65 Aligned_cols=752 Identities=53% Similarity=0.784 Sum_probs=676.3
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCC
Q 003468 24 FPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGE 103 (817)
Q Consensus 24 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 103 (817)
.++|..+++|++..|+||+.+|||.+|+.+|+++||+|+++.....++|+++++||.++++.+|+++|++||++.+
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~---- 77 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD---- 77 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh----
Confidence 5678899999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcc
Q 003468 104 EGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKV 183 (817)
Q Consensus 104 ~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~i 183 (817)
|.++++|.+++++++.+++||||+++|++++|+++.|+.++|+|+|+. ..++++||||||||.|+-||+|
T Consensus 78 ---------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~-~~i~A~eLVPGDiV~l~vGDkV 147 (972)
T KOG0202|consen 78 ---------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKL-QHILARELVPGDIVELKVGDKI 147 (972)
T ss_pred ---------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcc-cceehhccCCCCEEEEecCCcc
Confidence 557888999999999999999999999999999999999999999987 9999999999999999999999
Q ss_pred cccEEEEeecCCeEEEeecCCCCCccccccccccCC--CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhH
Q 003468 184 PADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP--ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQ 261 (817)
Q Consensus 184 PaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~--~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 261 (817)
|||.||++. -++.||||+|||||.||.|.....+ ++.+..+++|++|+||.|..|.++|+|+.||.+|.+|++.++
T Consensus 148 PADlRl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~ 225 (972)
T KOG0202|consen 148 PADLRLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKM 225 (972)
T ss_pred ccceeEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHH
Confidence 999999984 4599999999999999999887765 677889999999999999999999999999999999999999
Q ss_pred hhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccC
Q 003468 262 IHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPE 341 (817)
Q Consensus 262 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~ 341 (817)
++.. +++++|||++++.+...++.++.++++.+|++.+.++.+....+.| +....++|.+++++.++++|+
T Consensus 226 m~~~--e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~-------fk~~~~~f~IaVsLAVAAIPE 296 (972)
T KOG0202|consen 226 MQAT--ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSW-------FKGALYYFKIAVSLAVAAIPE 296 (972)
T ss_pred Hhcc--CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccc-------hhchhhhhhHHHHHHHHhccC
Confidence 9988 8889999999999999999889999999998876655433222224 666788999999999999999
Q ss_pred chHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCC
Q 003468 342 GLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPS 421 (817)
Q Consensus 342 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (817)
|||+.+++++++|.+||+|++++||+++++|+||++++||+|||||||+|+|++.++|+.+.......++...+..|++.
T Consensus 297 GLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~ 376 (972)
T KOG0202|consen 297 GLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPE 376 (972)
T ss_pred CCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988777778888899999998
Q ss_pred CCcccCCCC----CCCCHHHHHHHHHHhHhcCCeeeecC-CeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhh
Q 003468 422 DGRIEGWPV----GRMDANLQTIAKISAVCNDAGVEQSG-NHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLR 496 (817)
Q Consensus 422 ~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 496 (817)
+....+... ......+..++.++++||++.+++.. +.|...|.|+|.||..+++++|+........ ++.....
T Consensus 377 g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~--s~~~~~~ 454 (972)
T KOG0202|consen 377 GEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNL--SNEEASA 454 (972)
T ss_pred CceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcc--ccccccc
Confidence 776655532 23567788999999999999888654 6788899999999999999999876431111 1111235
Q ss_pred hhhhccccccceEeeccCCCCceEEEEEeecCCc--EEEEEeCcchHHHhccccccccCC-ceeecCHHHHHHHHHHHHH
Q 003468 497 CCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGN--KKLLVKGAVENLLERSSFVQLLDG-SVVELDQYSRDLILQSLQE 573 (817)
Q Consensus 497 ~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~--~~~~~KGa~e~il~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 573 (817)
|+..+...++...++||+|+||+|||.+.+..++ +.+|+|||+|.|+++|+.+...+| ..+|+++..|+.+.+...+
T Consensus 455 c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~ 534 (972)
T KOG0202|consen 455 CNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYE 534 (972)
T ss_pred chhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHH
Confidence 6666777778889999999999999999876654 799999999999999988887776 5599999999999999999
Q ss_pred HHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEE
Q 003468 574 MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMV 653 (817)
Q Consensus 574 ~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~ 653 (817)
|+++|+|||++|+++.+. ..+.+..+.+..++..+|+||+|+|++++.||||++++++|+.|+++||+|+|
T Consensus 535 ~g~~gLRvLalA~~~~~~---------~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~m 605 (972)
T KOG0202|consen 535 MGSEGLRVLALASKDSPG---------QVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIM 605 (972)
T ss_pred HhhccceEEEEEccCCcc---------cChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEE
Confidence 999999999999997653 12233445566778889999999999999999999999999999999999999
Q ss_pred ECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcC
Q 003468 654 ITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGD 733 (817)
Q Consensus 654 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GD 733 (817)
+|||+..||.+||+++|+...++++....++|.+++++..+..........+|+|++|.+|.++|+.||++|+.|+|+||
T Consensus 606 ITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGD 685 (972)
T KOG0202|consen 606 ITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGD 685 (972)
T ss_pred EcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCC
Confidence 99999999999999999999888888899999999999444333333478899999999999999999999999999999
Q ss_pred CccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 734 GVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 734 g~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
|.||+|+||.||||||||.+|+++||+|||+|+.||||++|+.++++||.+|+||++|+.|+++.|++.+...++...
T Consensus 686 GVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa 763 (972)
T KOG0202|consen 686 GVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAA 763 (972)
T ss_pred CccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888777654
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-124 Score=1012.30 Aligned_cols=715 Identities=34% Similarity=0.488 Sum_probs=610.9
Q ss_pred CCHHHHHHHhCCCCCCCCCH--HHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003468 29 KDVEECEEKYGVNPKIGLSV--GEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGG 106 (817)
Q Consensus 29 ~~~~~~~~~l~~~~~~GL~~--~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 106 (817)
-++++++++|+|||..||+. +|..+|++.||.|.+|++++++||+++|+.|.+...++|.++|++++.++++... .
T Consensus 101 gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g--~ 178 (1034)
T KOG0204|consen 101 GGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPG--I 178 (1034)
T ss_pred cCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCC--C
Confidence 36999999999999999986 8899999999999999999999999999999999999999999999999988652 2
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcc-cceEEecCCccceeeecCCccCCcEEEecCCCcccc
Q 003468 107 EMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQS-EQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPA 185 (817)
Q Consensus 107 ~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~-~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPa 185 (817)
+ ..|++++.|++.+++..++....+|+.++++++|++... .++.|+|+|+. ++|+..|||||||+.|+.||.+||
T Consensus 179 ~---~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r-~~isI~diVVGDIv~lk~GDqvPA 254 (1034)
T KOG0204|consen 179 E---DGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRR-QQISIYDLVVGDIVQLKIGDQVPA 254 (1034)
T ss_pred C---cccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEE-EEEEEeeeeeccEEEeecCCcccc
Confidence 2 379999999999888889999999999999999986543 48999999998 999999999999999999999999
Q ss_pred cEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhh
Q 003468 186 DMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEA 265 (817)
Q Consensus 186 D~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 265 (817)
||++++ +.++.+|||++||||+++.|... .++++++||++.+|+++++|+++|.+|..|+++..+...
T Consensus 255 DGvli~--gn~L~iDESSlTGESd~v~k~~~----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 255 DGVLIQ--GNSLKIDESSLTGESDHVQKSLD----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred ceEEEe--ccceeEecccccCCCcceeccCC----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 999997 57899999999999999999864 357999999999999999999999999999999998887
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCC-CC--cccccchhhHHHHHHHHHHHHhhhccCc
Q 003468 266 SQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDG-WP--RNFKFSFEKCTYYFEIAVALAVAAIPEG 342 (817)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~i~llv~~iP~~ 342 (817)
..+++|+|-++++++..+..+.++++++++++.+..|....+..+ -+ .......+.+..+|.+++.++++++|+|
T Consensus 323 --~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEG 400 (1034)
T KOG0204|consen 323 --GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEG 400 (1034)
T ss_pred --CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCC
Confidence 668999999999999999998888888887776655432221111 10 1111225667788889999999999999
Q ss_pred hHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCC
Q 003468 343 LPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSD 422 (817)
Q Consensus 343 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (817)
||+++++++++++++|.+++.+||++++||++|+.++||+|||||||+|+|+|.+.|+.+..+. .+. +.
T Consensus 401 LPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k------~~~----~~- 469 (1034)
T KOG0204|consen 401 LPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYK------VNS----PK- 469 (1034)
T ss_pred ccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccc------ccC----cc-
Confidence 9999999999999999999999999999999999999999999999999999999998764322 110 00
Q ss_pred CcccCCCCCCCCHHHHH-HHHHHhHhcCCeee-ecC--CeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhh
Q 003468 423 GRIEGWPVGRMDANLQT-IAKISAVCNDAGVE-QSG--NHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCC 498 (817)
Q Consensus 423 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~-~~~--~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 498 (817)
. ...++.+.. +....+...+..+. ++. ..++..|+|+|.||+.+...+|.+.+.
T Consensus 470 --~-----~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~--------------- 527 (1034)
T KOG0204|consen 470 --S-----SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD--------------- 527 (1034)
T ss_pred --c-----ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh---------------
Confidence 0 012333333 33333333333332 232 378889999999999999999875432
Q ss_pred hhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhh
Q 003468 499 QLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTA 578 (817)
Q Consensus 499 ~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 578 (817)
.+....+++.+||+|.||+|+++++.+++..++++|||+|.++..|+++...+|+..++++..+..+.+.++.|+++|
T Consensus 528 --~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~ 605 (1034)
T KOG0204|consen 528 --VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEG 605 (1034)
T ss_pred --hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhh
Confidence 123456789999999999999999977776349999999999999999999999999999999999999999999999
Q ss_pred hceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCC
Q 003468 579 LRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDN 658 (817)
Q Consensus 579 ~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~ 658 (817)
+|++++|||++..... .+.+..+.+..+.+|+++|+++++||+||+++++|+.|+++||.|.|+||||
T Consensus 606 LRti~lAy~df~~~~~------------~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDN 673 (1034)
T KOG0204|consen 606 LRTICLAYRDFVAGPD------------EEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDN 673 (1034)
T ss_pred hheeeEEeeccccCCC------------CCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCc
Confidence 9999999998654300 0111222345678999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCH
Q 003468 659 KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDA 738 (817)
Q Consensus 659 ~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~ 738 (817)
..||++||.+|||..++.+ ...++|.+|.++.++...-..++-.|+||.+|.+|..+|+.+++.|++|+++|||.||+
T Consensus 674 I~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDa 751 (1034)
T KOG0204|consen 674 INTAKAIARECGILTPGGD--FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDA 751 (1034)
T ss_pred HHHHHHHHHHcccccCCCc--cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCc
Confidence 9999999999999987665 57889999998844333333347789999999999999999999999999999999999
Q ss_pred HHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 739 PALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 739 ~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
|||+.||||.|||++|+|+|||+||+|++||||++|+++++|||+.|.||+||+||+++.|+..++..|.+...
T Consensus 752 PALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~ 825 (1034)
T KOG0204|consen 752 PALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACA 825 (1034)
T ss_pred hhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999887776665543
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-120 Score=1084.04 Aligned_cols=744 Identities=32% Similarity=0.504 Sum_probs=606.5
Q ss_pred ccccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 003468 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWY 100 (817)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 100 (817)
.+..+||..+++++++.|+|++..|||++||++|+++||+|+++.++++++|+++++||+++++++|+++++++++++
T Consensus 2 ~~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-- 79 (1053)
T TIGR01523 2 AEFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-- 79 (1053)
T ss_pred CCCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--
Confidence 345789999999999999999889999999999999999999999888999999999999999999999999999864
Q ss_pred cCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCC
Q 003468 101 DGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180 (817)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G 180 (817)
.|.++++|+++++++++++++||+++++++++|+++.+++++|+|||++ ++|+++||||||||.|++|
T Consensus 80 -----------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~-~~I~a~eLVpGDIv~L~~G 147 (1053)
T TIGR01523 80 -----------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKS-DAIDSHDLVPGDICLLKTG 147 (1053)
T ss_pred -----------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCee-eecCHhhCCCCCEEEECCC
Confidence 6889999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred CcccccEEEEeecCCeEEEeecCCCCCccccccccccCC---CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhh
Q 003468 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP---ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGK 257 (817)
Q Consensus 181 ~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~---~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~ 257 (817)
|+||||++|++ ++++.||||+|||||.||.|.+.... ++.++.++.|++|+||.|.+|++.++|++||.+|.+|+
T Consensus 148 d~VPAD~rLi~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 148 DTIPADLRLIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGA 225 (1053)
T ss_pred CEeeccEEEEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHH
Confidence 99999999998 57899999999999999999875432 33456678899999999999999999999999999999
Q ss_pred hHhHhhhhcc---C------------------------------CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003468 258 VHSQIHEASQ---N------------------------------EEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYF 304 (817)
Q Consensus 258 i~~~~~~~~~---~------------------------------~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 304 (817)
|++++..... + ..+||+|+++++++.++..++++++++++++...
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-- 303 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-- 303 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 9998865321 0 1249999999999998887777777666654211
Q ss_pred ccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCC
Q 003468 305 LTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDK 384 (817)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DK 384 (817)
..+ ...+.++++++++++|++||++++++++++++||++++++||+++++|+||++++||+||
T Consensus 304 ------~~~-----------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDK 366 (1053)
T TIGR01523 304 ------DVD-----------KEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDK 366 (1053)
T ss_pred ------hhh-----------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecC
Confidence 000 234557889999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccEEEEEEEeCCcCCccceeeec--CCccCCCCCc---------------------c--------cC--CCCC
Q 003468 385 TGTLTTNQMAVTKLVAVGSRAGTLRSFNVQ--GTTYNPSDGR---------------------I--------EG--WPVG 431 (817)
Q Consensus 385 TGTLT~~~m~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------------------~--------~~--~~~~ 431 (817)
|||||+|+|+|.++|..+..+ +.+. +..|.+.... . .. .+..
T Consensus 367 TGTLT~N~M~V~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1053)
T TIGR01523 367 TGTITQGKMIARQIWIPRFGT-----ISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPED 441 (1053)
T ss_pred cCccccceEEEEEEEEcCCce-----EEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999998754110 0011 0111111000 0 00 0000
Q ss_pred CCCHHHHHHHHHHhHhcCCeeeec--CCeeEeCCChhHHHHHHHHHHcCCCCCCCCC--CC-CCch----hhh-hhhhhc
Q 003468 432 RMDANLQTIAKISAVCNDAGVEQS--GNHYVASGMPTEAALKVMVEKMGFPEGVNHG--SS-SSPE----DVL-RCCQLW 501 (817)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~--~~-~~~~----~~~-~~~~~~ 501 (817)
..+..+..++.++++||++.+... ++.+...|+|+|.||+.++.+.|+....... .. .... .+. ......
T Consensus 442 ~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1053)
T TIGR01523 442 IDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPG 521 (1053)
T ss_pred cccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccccccc
Confidence 012345668888899998876542 2345567999999999999988874210000 00 0000 000 000011
Q ss_pred cccccceEeeccCCCCceEEEEEeecCC-cEEEEEeCcchHHHhccccccccCC-ceeecCHHHHHHHHHHHHHHHHhhh
Q 003468 502 NTLEQRFATLEFDRDRKSMGVLVNSSSG-NKKLLVKGAVENLLERSSFVQLLDG-SVVELDQYSRDLILQSLQEMSSTAL 579 (817)
Q Consensus 502 ~~~~~~l~~~~F~s~~k~msvvv~~~~~-~~~~~~KGa~e~il~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~ 579 (817)
...+++++++||+|+||||+++++..++ .+++|+|||||.|+++|+.+...+| ...++++..++.+.+.+++|+++|+
T Consensus 522 ~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~Gl 601 (1053)
T TIGR01523 522 SAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGL 601 (1053)
T ss_pred ccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCC
Confidence 2356789999999999999999986544 4789999999999999997765454 5678999999999999999999999
Q ss_pred ceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCH
Q 003468 580 RCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNK 659 (817)
Q Consensus 580 r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~ 659 (817)
||+++|||++..+.. ... ....+...++.+|+||+|+|+++|+||+|++++++|+.|+++||+++|+|||++
T Consensus 602 RvLa~A~r~l~~~~~--~~~------~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~ 673 (1053)
T TIGR01523 602 RVLAFASKSFDKADN--NDD------QLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFP 673 (1053)
T ss_pred eEEEEEEEECCchhc--cch------hhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCH
Confidence 999999998754210 000 000001123457899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCc------cccccccChhHHHHHHH-HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEc
Q 003468 660 NTAEAICREIGVFGAHE------DISSQSITGKEFMDIHN-QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 732 (817)
Q Consensus 660 ~~a~~ia~~~gi~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~G 732 (817)
.||.++|+++|+...+. .....+++|.+++.+.+ +...+. ....||+|++|+||.++|+.+|+.|+.|+|+|
T Consensus 674 ~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~-~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~G 752 (1053)
T TIGR01523 674 ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK-ALCLVIARCAPQTKVKMIEALHRRKAFCAMTG 752 (1053)
T ss_pred HHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh-hcCeEEEecCHHHHHHHHHHHHhcCCeeEEeC
Confidence 99999999999975321 11235788999887732 222222 25679999999999999999999999999999
Q ss_pred CCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 733 DGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 733 Dg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
||.||+|||++||||||||.+|+++|+++||+++.+|+|++|+.++++||++|+||+|++.|.+++|+.++++++++.+.
T Consensus 753 DGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~ 832 (1053)
T TIGR01523 753 DGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAF 832 (1053)
T ss_pred CCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999988887765
Q ss_pred c
Q 003468 813 A 813 (817)
Q Consensus 813 ~ 813 (817)
.
T Consensus 833 ~ 833 (1053)
T TIGR01523 833 R 833 (1053)
T ss_pred h
Confidence 3
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-119 Score=1066.90 Aligned_cols=709 Identities=42% Similarity=0.604 Sum_probs=615.9
Q ss_pred CCccccccccccCCHH--HHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHH
Q 003468 17 ESSNEETFPAWAKDVE--ECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVS 94 (817)
Q Consensus 17 ~~~~~~~~~~~~~~~~--~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 94 (817)
.+.+.....||..+.+ ++...+.+++..||+.+|+.+|++.||+|+++..+..++|+.++.+|++++.++|+++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s 93 (917)
T COG0474 14 SSTPVTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLS 93 (917)
T ss_pred ccccCCcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556788999999 99999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcE
Q 003468 95 FVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDI 174 (817)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDI 174 (817)
+++..+... .....+|+++++++.+++++||+++++++++|++..+.+++|+|||++ ++|+++|||||||
T Consensus 94 ~~~~~~~~~---------~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~-~~i~a~eLVpGDi 163 (917)
T COG0474 94 AFVGDWVDA---------GVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKF-VEIPASELVPGDI 163 (917)
T ss_pred HHhhccccc---------CcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcE-EEecHHHCCCCcE
Confidence 988754210 034456777888899999999999999999999999999999999999 9999999999999
Q ss_pred EEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCC-CccceeeeCcEEeeCeEEEEEeeeCCc
Q 003468 175 VELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQ-GKKCMVFAGTTVVNGTCTCLVTNTGMN 252 (817)
Q Consensus 175 I~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~-~~~~~l~~Gt~v~~g~~~~~V~~tG~~ 252 (817)
|.|++||+||||++|+++ .+++||||+|||||.|+.|.+.+.. ++.+.. +++|++|+||.|.+|++.++|++||.+
T Consensus 164 V~l~~gd~vPAD~rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~ 241 (917)
T COG0474 164 VLLEAGDVVPADLRLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFE 241 (917)
T ss_pred EEECCCCccccceEEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCc
Confidence 999999999999999985 3379999999999999999987655 455565 889999999999999999999999999
Q ss_pred cchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHH
Q 003468 253 TEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAV 332 (817)
Q Consensus 253 T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 332 (817)
|.+|++++.+... ....+|+++.++++...+..++++++++++++.++... .+| ...|..++
T Consensus 242 T~~G~ia~~~~~~--~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-----~~~-----------~~~~~~~v 303 (917)
T COG0474 242 TEFGKIARLLPTK--KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-----NGL-----------LESFLTAL 303 (917)
T ss_pred cHHHHHHHhhccc--cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ccH-----------HHHHHHHH
Confidence 9999999998876 46789999999999999999888888888877633211 112 45688899
Q ss_pred HHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceee
Q 003468 333 ALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFN 412 (817)
Q Consensus 333 ~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~ 412 (817)
+++++++|++||+.+++++++++.+|+++++++|+++++|+||++++||||||||||+|+|+|.+++..+..
T Consensus 304 ~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~-------- 375 (917)
T COG0474 304 ALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG-------- 375 (917)
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCc--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999987410
Q ss_pred ecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCch
Q 003468 413 VQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPE 492 (817)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~ 492 (817)
...++ ........+..++..+++||+...... + ++..|||+|.||+.++++.|+.. .
T Consensus 376 ---~~~~~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~-~~~~gdptE~Al~~~a~~~~~~~-~--------- 432 (917)
T COG0474 376 ---KDIDD--------KDLKDSPALLRFLLAAALCNSVTPEKN-G-WYQAGDPTEGALVEFAEKLGFSL-D--------- 432 (917)
T ss_pred ---ccccc--------cccccchHHHHHHHHHHhcCccccccc-C-ceecCCccHHHHHHHHHhcCCcC-C---------
Confidence 00000 001123444567788889999887766 5 88899999999999999988632 0
Q ss_pred hhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHH
Q 003468 493 DVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQ 572 (817)
Q Consensus 493 ~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (817)
...+...+++++++||+|+|||||++++..++++.+++|||||.|+++|++. ++..+++++.++.+.+..+
T Consensus 433 -----~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~ 503 (917)
T COG0474 433 -----LSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVK 503 (917)
T ss_pred -----HHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHH
Confidence 1123344578999999999999999999777779999999999999999976 7778899999999999999
Q ss_pred HHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEE
Q 003468 573 EMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVM 652 (817)
Q Consensus 573 ~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~ 652 (817)
+|+++||||+++|||..+... ..... +..|+||+|+|+++|+||||++++++|+.|+++||+++
T Consensus 504 ~la~~glRvla~A~k~~~~~~---------------~~~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 504 ELASEGLRVLAVAYKKLDRAE---------------KDDEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred HHHHHHHHHHHHHhccCCccc---------------ccchh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 999999999999999654311 00111 56799999999999999999999999999999999999
Q ss_pred EECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHH--hHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEE
Q 003468 653 VITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQ--KNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAM 730 (817)
Q Consensus 653 ~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~ 730 (817)
|+|||+..||++||++||+...... ..+++|.++..+.+. ...+. +..||||++|+||.++|+.+|+.|+.|+|
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~~~--~~vi~G~el~~l~~~el~~~~~--~~~VfARvsP~qK~~IV~~lq~~g~vVam 643 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEAES--ALVIDGAELDALSDEELAELVE--ELSVFARVSPEQKARIVEALQKSGHVVAM 643 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCCc--eeEeehHHhhhcCHHHHHHHhh--hCcEEEEcCHHHHHHHHHHHHhCCCEEEE
Confidence 9999999999999999998765322 458899999888332 33444 34499999999999999999999999999
Q ss_pred EcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhh
Q 003468 731 TGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNL 810 (817)
Q Consensus 731 ~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 810 (817)
+|||.||+||||+||||||||.+|+|++|++||+++.++++..++.+++|||++|.|++|++.|.+++|++..++++++.
T Consensus 644 tGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~ 723 (917)
T COG0474 644 TGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYS 723 (917)
T ss_pred eCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999998887
Q ss_pred ccccc
Q 003468 811 DKAIF 815 (817)
Q Consensus 811 ~~~~f 815 (817)
+...|
T Consensus 724 ~~~~~ 728 (917)
T COG0474 724 LFNLF 728 (917)
T ss_pred HHhcc
Confidence 77665
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-115 Score=1048.54 Aligned_cols=729 Identities=30% Similarity=0.459 Sum_probs=603.5
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCC
Q 003468 24 FPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGE 103 (817)
Q Consensus 24 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 103 (817)
-+||..+++++++.|+|++.+|||++||++|+++||+|++++++++++|+.++++|+++++++++++++++++++.+...
T Consensus 15 ~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~ 94 (997)
T TIGR01106 15 MDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAS 94 (997)
T ss_pred CCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc
Confidence 47899999999999999999999999999999999999999888899999999999999999999999998876544211
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcc
Q 003468 104 EGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKV 183 (817)
Q Consensus 104 ~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~i 183 (817)
.+.......|++++++++++++++++++++|+|+++.+++++++.+.+++|+|+|++ ++|+++||||||+|.|++||+|
T Consensus 95 ~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~-~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 95 TEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK-MSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred cCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEeeHHHCCCCCEEEECCCCEE
Confidence 011112236888999999999999999999999999999999998999999999998 9999999999999999999999
Q ss_pred cccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhh
Q 003468 184 PADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263 (817)
Q Consensus 184 PaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~ 263 (817)
||||+|++ ++.+.||||+|||||.|+.|.++.. ...+.+.+|++|+||.|++|++.++|++||.+|.+|++.+.+.
T Consensus 174 PaD~~il~--~~~l~VdeS~LTGES~pv~K~~~~~--~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 249 (997)
T TIGR01106 174 PADLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT--HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLAS 249 (997)
T ss_pred eeeEEEEE--ccCcEEEccccCCCCCceeccCCCc--ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhh
Confidence 99999997 3468999999999999999987632 2223467899999999999999999999999999999999887
Q ss_pred hhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCch
Q 003468 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGL 343 (817)
Q Consensus 264 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L 343 (817)
.. ..+++|+++.+++++..++.+++++++++++++.... ..| ...+.+++++++++|||+|
T Consensus 250 ~~--~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----------~~~~~~~i~v~v~~iP~~L 310 (997)
T TIGR01106 250 GL--ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG------YTW-----------LEAVIFLIGIIVANVPEGL 310 (997)
T ss_pred hc--ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCH-----------HHHHHHHHHHHhhcCCccc
Confidence 76 5678999999999999988887777776665543211 111 3356678889999999999
Q ss_pred HHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCC
Q 003468 344 PAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDG 423 (817)
Q Consensus 344 ~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (817)
|++++++++.++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+. ..+. +.+.+.
T Consensus 311 ~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~------~~~~-~~~~~~ 383 (997)
T TIGR01106 311 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE------ADTT-EDQSGV 383 (997)
T ss_pred hHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEe------cCCc-cCCCCc
Confidence 999999999999999999999999999999999999999999999999999999997653211 1110 011000
Q ss_pred cccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCC-----eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhh
Q 003468 424 RIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGN-----HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCC 498 (817)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 498 (817)
...........+..++++||++.+....+ ..+..|+|+|.||+.++.+.+...
T Consensus 384 -----~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~----------------- 441 (997)
T TIGR01106 384 -----SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV----------------- 441 (997)
T ss_pred -----cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH-----------------
Confidence 00011234456778889999876543211 234579999999999987644311
Q ss_pred hhccccccceEeeccCCCCceEEEEEeec---CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHH
Q 003468 499 QLWNTLEQRFATLEFDRDRKSMGVLVNSS---SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMS 575 (817)
Q Consensus 499 ~~~~~~~~~l~~~~F~s~~k~msvvv~~~---~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (817)
...+..+.+++.+||+|+||||++++... ++.+++|+|||||.|+++|+.+. .+|...+++++.++.+.+.+++|+
T Consensus 442 ~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a 520 (997)
T TIGR01106 442 MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELG 520 (997)
T ss_pred HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHH
Confidence 11234567789999999999999988642 24578999999999999999775 578888999999999999999999
Q ss_pred HhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEEC
Q 003468 576 STALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVIT 655 (817)
Q Consensus 576 ~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~T 655 (817)
++|+||+++|||.+..+.. .... .......+..|+||+|+|+++++||+|++++++|++|+++||+++|+|
T Consensus 521 ~~GlRvla~A~k~l~~~~~--~~~~-------~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~T 591 (997)
T TIGR01106 521 GLGERVLGFCHLYLPDEQF--PEGF-------QFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 591 (997)
T ss_pred hcCCEEEEEEEeecCcccc--cccc-------cccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEEC
Confidence 9999999999998754210 0000 000011123488999999999999999999999999999999999999
Q ss_pred CCCHhhHHHHHHHhCCCCCCcc--------------------ccccccChhHHHHHH--HHhHhhccCCceEEEecCccc
Q 003468 656 GDNKNTAEAICREIGVFGAHED--------------------ISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRH 713 (817)
Q Consensus 656 Gd~~~~a~~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~r~~p~~ 713 (817)
||++.+|.++|+++|+...+.. -...+++|.+++.+. +....+......||||++|+|
T Consensus 592 Gd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeq 671 (997)
T TIGR01106 592 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQ 671 (997)
T ss_pred CCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHH
Confidence 9999999999999999754321 012478888888762 223333333456999999999
Q ss_pred HHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHH
Q 003468 714 KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIR 793 (817)
Q Consensus 714 K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 793 (817)
|.++|+.+|+.|+.|+|+|||.||+|||++||||||||++|++++|++||+++.+|+|+.|++++++||++|.|++++++
T Consensus 672 K~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~ 751 (997)
T TIGR01106 672 KLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIA 751 (997)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHhhhccccc
Q 003468 794 YGFCHLENHCLSLELNLDKAIF 815 (817)
Q Consensus 794 ~~~~~n~~~~~~~~~~~~~~~f 815 (817)
|.++.|+..+++.+++.+...|
T Consensus 752 ~~l~~ni~~~~~~~~~~~~~~~ 773 (997)
T TIGR01106 752 YTLTSNIPEITPFLIFIIANIP 773 (997)
T ss_pred HHHHhhHHHHHHHHHHHHHcCc
Confidence 9999999999999888776554
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-113 Score=1016.88 Aligned_cols=671 Identities=29% Similarity=0.450 Sum_probs=576.0
Q ss_pred ccccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 003468 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWY 100 (817)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 100 (817)
+++...+..+.+++++.|++++ +|||++||++|+++||+|+++.++++++|+.++++|++|++++++++++++++++
T Consensus 44 ~~~~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-- 120 (902)
T PRK10517 44 ARCLKAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-- 120 (902)
T ss_pred HHHHHHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--
Confidence 3467778899999999999997 6999999999999999999999999999999999999999999999999988753
Q ss_pred cCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecC------CccceeeecCCccCCcE
Q 003468 101 DGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRD------GKKIPSLSAKELVPGDI 174 (817)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~------g~~~~~i~~~dLv~GDI 174 (817)
.|.++++|+++++++.+++++||+|+++++++|+++.+++++|+|+ |++ ++|+++|||||||
T Consensus 121 -----------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~-~~I~~~eLvpGDi 188 (902)
T PRK10517 121 -----------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGW-LEIPIDQLVPGDI 188 (902)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeE-EEEEHHhCCCCCE
Confidence 6778899999999999999999999999999999999999999999 567 8999999999999
Q ss_pred EEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCcc
Q 003468 175 VELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNT 253 (817)
Q Consensus 175 I~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T 253 (817)
|.|++||+|||||+|++ +..+.||||+|||||.||.|.+++.. +..++.+.+|++|+||.|.+|++.++|++||.+|
T Consensus 189 V~l~~Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T 266 (902)
T PRK10517 189 IKLAAGDMIPADLRILQ--ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANT 266 (902)
T ss_pred EEECCCCEEeeeEEEEE--cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEecccc
Confidence 99999999999999997 45689999999999999999987643 3345667889999999999999999999999999
Q ss_pred chhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHH
Q 003468 254 EIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVA 333 (817)
Q Consensus 254 ~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 333 (817)
.+|+|.+++.++ ..+++|+++.+++++.+++.++++++.++++++.... .+| ...+.++++
T Consensus 267 ~~GkI~~~v~~~--~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~------~~~-----------~~~l~~als 327 (902)
T PRK10517 267 WFGQLAGRVSEQ--DSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK------GDW-----------WEAALFALS 327 (902)
T ss_pred HHHHHHHHhhcc--CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc------CCH-----------HHHHHHHHH
Confidence 999999999887 6778999999999999888877777766665542211 112 345778899
Q ss_pred HHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeee
Q 003468 334 LAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNV 413 (817)
Q Consensus 334 llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~ 413 (817)
+++++|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.++....
T Consensus 328 v~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~----------- 396 (902)
T PRK10517 328 VAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS----------- 396 (902)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred cCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchh
Q 003468 414 QGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPED 493 (817)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~ 493 (817)
+ ... ..++..+++|... + ...+||+|.|++.+++..+..
T Consensus 397 -~----------------~~~---~~ll~~a~l~~~~--~------~~~~~p~d~All~~a~~~~~~------------- 435 (902)
T PRK10517 397 -G----------------KTS---ERVLHSAWLNSHY--Q------TGLKNLLDTAVLEGVDEESAR------------- 435 (902)
T ss_pred -C----------------CCH---HHHHHHHHhcCCc--C------CCCCCHHHHHHHHHHHhcchh-------------
Confidence 0 001 1233333343321 1 114899999999987643210
Q ss_pred hhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHH
Q 003468 494 VLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQE 573 (817)
Q Consensus 494 ~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (817)
.....+.++.++||+|++|+|+++++..++...+++||+||.++++|+.+. .+|...+++++.++.+.+..++
T Consensus 436 ------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~ 508 (902)
T PRK10517 436 ------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDT 508 (902)
T ss_pred ------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHH
Confidence 011245677899999999999999987777788999999999999999775 4667788999888899999999
Q ss_pred HHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEE
Q 003468 574 MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMV 653 (817)
Q Consensus 574 ~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~ 653 (817)
++++|+|++++|||++..+... .. ...|+|++|+|+++|+||+||+++++|++|+++||+++|
T Consensus 509 ~a~~G~rvlavA~k~~~~~~~~----------------~~-~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~m 571 (902)
T PRK10517 509 LNRQGLRVVAVATKYLPAREGD----------------YQ-RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKI 571 (902)
T ss_pred HHhcCCEEEEEEEecCCccccc----------------cc-cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEE
Confidence 9999999999999976431100 00 112689999999999999999999999999999999999
Q ss_pred ECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHH--HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEE
Q 003468 654 ITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN--QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMT 731 (817)
Q Consensus 654 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~ 731 (817)
+|||++.||.++|+++||.. ..+++|.+++.+.+ ....+. +..+|+|++|+||.++|+.+|++|+.|+|+
T Consensus 572 iTGD~~~tA~~IA~~lGI~~------~~v~~G~el~~l~~~el~~~~~--~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~ 643 (902)
T PRK10517 572 LTGDSELVAAKVCHEVGLDA------GEVLIGSDIETLSDDELANLAE--RTTLFARLTPMHKERIVTLLKREGHVVGFM 643 (902)
T ss_pred EcCCCHHHHHHHHHHcCCCc------cCceeHHHHHhCCHHHHHHHHh--hCcEEEEcCHHHHHHHHHHHHHCCCEEEEE
Confidence 99999999999999999953 24678888887722 222333 567999999999999999999999999999
Q ss_pred cCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 732 GDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 732 GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
|||.||+|||++|||||||| +|+|+||++||+|+++|+|..|++++++||++|+||+|++.|.+++|+..+++++++.+
T Consensus 644 GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~ 722 (902)
T PRK10517 644 GDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASA 722 (902)
T ss_pred CCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999988877654
Q ss_pred c
Q 003468 812 K 812 (817)
Q Consensus 812 ~ 812 (817)
.
T Consensus 723 ~ 723 (902)
T PRK10517 723 F 723 (902)
T ss_pred H
Confidence 3
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-113 Score=1017.34 Aligned_cols=695 Identities=27% Similarity=0.436 Sum_probs=582.7
Q ss_pred CCCCCCCCCCCc---ccc----ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHh
Q 003468 8 TGKRGNFDKESS---NEE----TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFN 80 (817)
Q Consensus 8 ~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~ 80 (817)
++-|+|+++.|+ ||| +...|..+++++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~ 80 (903)
T PRK15122 2 IKARRTNRKASEARKNHKKSMRIAREAANSLEETLANLNTHR-QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFN 80 (903)
T ss_pred chhhhhhhhhhhhhhccccchHHHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 345677777665 444 66778999999999999995 7999999999999999999999888899999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCC--
Q 003468 81 DTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDG-- 158 (817)
Q Consensus 81 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g-- 158 (817)
+|+.++|+++++++++++++.... ......|.++++|+++++++.+++++||+++++++++|+++.+.+++|+|+|
T Consensus 81 ~~~~~iL~~aa~ls~~~~~~~~~~--~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~ 158 (903)
T PRK15122 81 NPFIYVLMVLAAISFFTDYWLPLR--RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHA 158 (903)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcc--CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCcc
Confidence 999999999999999986542110 0112368899999999999999999999999999999999999999999995
Q ss_pred ----ccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCcccccccccc-----------CCCCCC
Q 003468 159 ----KKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKT-----------VPENSD 223 (817)
Q Consensus 159 ----~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~-----------~~~~~~ 223 (817)
++ ++|+++||||||+|.|++||+|||||+|++ +..+.||||+|||||.|+.|.+.+ ..+..+
T Consensus 159 ~~~g~~-~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~ 235 (903)
T PRK15122 159 GAEPVR-REIPMRELVPGDIVHLSAGDMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGS 235 (903)
T ss_pred CCCCeE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE--cCceEEEccccCCCCcceeeeccccccccccccccccccCC
Confidence 66 899999999999999999999999999997 456899999999999999998621 112344
Q ss_pred CCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003468 224 IQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKY 303 (817)
Q Consensus 224 ~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 303 (817)
+.+++|++|+||.|.+|++.++|++||.+|.+|+|.+++.. ...++|+++.++++...+..+..+++.+++++....
T Consensus 236 ~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~---~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~ 312 (903)
T PRK15122 236 LLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG---TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT 312 (903)
T ss_pred cccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 56778999999999999999999999999999999998866 345789999999998888776666655554443211
Q ss_pred hccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecC
Q 003468 304 FLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383 (817)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~D 383 (817)
. .+| ...+.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||
T Consensus 313 ~------~~~-----------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~D 375 (903)
T PRK15122 313 K------GDW-----------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTD 375 (903)
T ss_pred c------CCH-----------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEec
Confidence 1 111 34567889999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCC
Q 003468 384 KTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASG 463 (817)
Q Consensus 384 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 463 (817)
||||||+|+|+|.+++..+. . ... .++..++++... + ...+
T Consensus 376 KTGTLT~~~m~V~~~~~~~~--------------~--------------~~~---~~l~~a~l~s~~--~------~~~~ 416 (903)
T PRK15122 376 KTGTLTQDRIILEHHLDVSG--------------R--------------KDE---RVLQLAWLNSFH--Q------SGMK 416 (903)
T ss_pred CCcccccCeEEEEEEEcCCC--------------C--------------ChH---HHHHHHHHhCCC--C------CCCC
Confidence 99999999999998764220 0 011 122333332211 1 1258
Q ss_pred ChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHH
Q 003468 464 MPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLL 543 (817)
Q Consensus 464 ~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il 543 (817)
||+|.|++.++.+.+... ....+..+.++||++.+|+|+++++..++++++++|||||.++
T Consensus 417 ~p~e~All~~a~~~~~~~-------------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il 477 (903)
T PRK15122 417 NLMDQAVVAFAEGNPEIV-------------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEML 477 (903)
T ss_pred ChHHHHHHHHHHHcCchh-------------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHH
Confidence 999999999988765311 0123457789999999999999998767788999999999999
Q ss_pred hccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEE
Q 003468 544 ERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVF 623 (817)
Q Consensus 544 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 623 (817)
++|++.. .+|...++++..++++.+..++++.+|+|++++|||++..+... ....+..|+||+|
T Consensus 478 ~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~---------------~~~~~~~e~~l~~ 541 (903)
T PRK15122 478 AVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR---------------AQYSTADERDLVI 541 (903)
T ss_pred Hhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccc---------------cccccccccCcEE
Confidence 9999764 46777889999999999999999999999999999976431100 0011224789999
Q ss_pred EEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHH--HhHhhccC
Q 003468 624 VGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN--QKNYLRQD 701 (817)
Q Consensus 624 lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 701 (817)
+|+++|+||+||+++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|.+++.+.+ ....+.
T Consensus 542 lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~-- 613 (903)
T PRK15122 542 RGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVE-- 613 (903)
T ss_pred EEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhh--
Confidence 99999999999999999999999999999999999999999999999953 24678888887722 223333
Q ss_pred CceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHh
Q 003468 702 GGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 702 ~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~g 781 (817)
+..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+|+||++||+|+++|+|+.|++++++|
T Consensus 614 ~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~g 692 (903)
T PRK15122 614 ERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKG 692 (903)
T ss_pred hCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHH
Confidence 56699999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 782 RSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 782 R~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
|++|+||+|++.|.++.|+..+++.+++.+
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~~~~~~~~~~ 722 (903)
T PRK15122 693 RETFGNIIKYLNMTASSNFGNVFSVLVASA 722 (903)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999999887766544
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-112 Score=1019.94 Aligned_cols=708 Identities=33% Similarity=0.477 Sum_probs=583.9
Q ss_pred CCHHHHHHHhCCCCCCCCC--HHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003468 29 KDVEECEEKYGVNPKIGLS--VGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGG 106 (817)
Q Consensus 29 ~~~~~~~~~l~~~~~~GL~--~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 106 (817)
.+.+++++.|+||++.||| ++||++|+++||+|+++.++++++|++++++|+++++++|+++++++++++.+......
T Consensus 42 ~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~ 121 (941)
T TIGR01517 42 GGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGK 121 (941)
T ss_pred CCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhccccccc
Confidence 3799999999999999999 99999999999999999999999999999999999999999999999998754211112
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-cccceEEecCCccceeeecCCccCCcEEEecCCCcccc
Q 003468 107 EMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEI-QSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPA 185 (817)
Q Consensus 107 ~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPa 185 (817)
..+...|+++++++++++++.++++++|++++++++++++. .+.+++|+|||++ ++|+++||||||||.|++||+|||
T Consensus 122 ~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~-~~I~~~~Lv~GDiV~l~~Gd~IPa 200 (941)
T TIGR01517 122 ADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQE-QQISIHDIVVGDIVSLSTGDVVPA 200 (941)
T ss_pred CccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEE-EEEeHHHCCCCCEEEECCCCEecc
Confidence 23345789999999999999999999999999999999864 4668999999998 999999999999999999999999
Q ss_pred cEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhh
Q 003468 186 DMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEA 265 (817)
Q Consensus 186 D~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 265 (817)
||+|++ +..+.||||+|||||.|+.|.++ .+|++|+||.|.+|++.++|++||.+|.+|++.+++..+
T Consensus 201 D~~li~--g~~l~VdES~LTGES~pv~K~~~----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~ 268 (941)
T TIGR01517 201 DGVFIS--GLSLEIDESSITGESDPIKKGAP----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAE 268 (941)
T ss_pred cEEEEE--cCcEEEEecccCCCCCcccccCC----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccC
Confidence 999996 34899999999999999999875 247999999999999999999999999999999988765
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHH
Q 003468 266 SQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPA 345 (817)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~ 345 (817)
. .++|++++++++..++..+++++++++++++...+.......+.. ........+...+..++++++++|||+||+
T Consensus 269 --~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~al~llv~~iP~~Lp~ 344 (941)
T TIGR01517 269 --G-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR-DTEEDAQTFLDHFIIAVTIVVVAVPEGLPL 344 (941)
T ss_pred --C-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-ccchhhHHHHHHHHHHHHHHHhhCCCchHH
Confidence 3 567999999999999988777777666655432211000001100 000011234556788999999999999999
Q ss_pred HHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcc
Q 003468 346 VITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRI 425 (817)
Q Consensus 346 ~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (817)
+++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+. .++. .
T Consensus 345 ~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~------~~~~--------~ 410 (941)
T TIGR01517 345 AVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFN------VRDV--------L 410 (941)
T ss_pred HHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEe------cCcc--------c
Confidence 9999999999999999999999999999999999999999999999999999986542111 0000 0
Q ss_pred cCCCCCCCCHHHHHHHHHHhHhcCCeeee-c-CCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccc
Q 003468 426 EGWPVGRMDANLQTIAKISAVCNDAGVEQ-S-GNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNT 503 (817)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (817)
. ........++..++.||+..... . .+..+..|+|+|.|++.++...|.+.. ..+.
T Consensus 411 ~-----~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~-----------------~~~~ 468 (941)
T TIGR01517 411 R-----NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ-----------------EVRA 468 (941)
T ss_pred c-----cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-----------------HHHh
Confidence 0 01122334444445555443221 1 223356799999999999987764321 0122
Q ss_pred cccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceee
Q 003468 504 LEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLG 583 (817)
Q Consensus 504 ~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~ 583 (817)
.+++++.+||+|.||||+++++..++++++++|||||.++++|+.+...+|...++++ .++.+.+.+++++++|+|+++
T Consensus 469 ~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~ 547 (941)
T TIGR01517 469 EEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTIC 547 (941)
T ss_pred hchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEE
Confidence 3456788999999999999999776778999999999999999987656777778877 788899999999999999999
Q ss_pred eeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH
Q 003468 584 FAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE 663 (817)
Q Consensus 584 ~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 663 (817)
+||+++..+. + ...+..|+||+|+|+++|+||+|++++++|++|+++||+++|+|||++.||.
T Consensus 548 ~A~~~~~~~~--~---------------~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~ 610 (941)
T TIGR01517 548 LAYRDFAPEE--F---------------PRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAK 610 (941)
T ss_pred EEEEecCccc--c---------------ccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHH
Confidence 9999764310 0 0012247899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccccccccChhHHHHHH-H-HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHh
Q 003468 664 AICREIGVFGAHEDISSQSITGKEFMDIH-N-QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 741 (817)
Q Consensus 664 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l 741 (817)
++|+++|+...+. .+++|++++.+. + ....+. +..+|||++|+||.++|+.+|+.|+.|+|+|||.||+|||
T Consensus 611 ~iA~~~GI~~~~~----~vi~G~~~~~l~~~el~~~i~--~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapAL 684 (941)
T TIGR01517 611 AIARNCGILTFGG----LAMEGKEFRRLVYEEMDPILP--KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPAL 684 (941)
T ss_pred HHHHHcCCCCCCc----eEeeHHHhhhCCHHHHHHHhc--cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHH
Confidence 9999999976432 478888888762 2 222332 5679999999999999999999999999999999999999
Q ss_pred hhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhccc
Q 003468 742 KLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDKA 813 (817)
Q Consensus 742 ~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~ 813 (817)
++||||||||.+|+|+|+++||+++++|+|+.|++++++||++|+||+|+++|.+++|+..++..+++.+..
T Consensus 685 k~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~ 756 (941)
T TIGR01517 685 KLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCIS 756 (941)
T ss_pred HhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988999999999999999999999999999999999999999999999999888877765443
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-112 Score=1009.97 Aligned_cols=693 Identities=38% Similarity=0.599 Sum_probs=589.4
Q ss_pred cccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCccCCCCCCCHHHHHHHHH-hhHHHHHHHHHHHHHHHHhhcc
Q 003468 24 FPAWAKDVEECEEKYGVNPKIGLS-VGEVKKRREIYGYNELEKHEGTSIFQLILEQF-NDTLVRILLVAAVVSFVLAWYD 101 (817)
Q Consensus 24 ~~~~~~~~~~~~~~l~~~~~~GL~-~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~~~ 101 (817)
++||..+++++++.|+|++..||| ++|+++|+++||+|+++.++++++|+.++++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 789999999999999999999999 89999999999999999988899999999999 8999999999999998764
Q ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCC
Q 003468 102 GEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGD 181 (817)
Q Consensus 102 ~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~ 181 (817)
.|.++++++++++++..+++++|+++++.+++|+++.+.+++|+|||++ ++|+++||||||||.|++||
T Consensus 79 ----------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~-~~I~~~eLv~GDiv~l~~Gd 147 (884)
T TIGR01522 79 ----------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKL-EHVLASTLVPGDLVCLSVGD 147 (884)
T ss_pred ----------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEEEHHHCccCCEEEecCCC
Confidence 5778888888888899999999999999999999999999999999998 89999999999999999999
Q ss_pred cccccEEEEeecCCeEEEeecCCCCCccccccccccCCC--CCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhH
Q 003468 182 KVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPE--NSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259 (817)
Q Consensus 182 ~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~--~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~ 259 (817)
+|||||+|++ +..+.||||+|||||.|+.|.+++.+. ..+..+++|++|+||.|.+|++.++|++||.+|.+|+|.
T Consensus 148 ~IPaDg~ii~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 148 RVPADLRIVE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred EEeeeEEEEE--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHH
Confidence 9999999997 346899999999999999999875431 234567789999999999999999999999999999999
Q ss_pred hHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhc
Q 003468 260 SQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAI 339 (817)
Q Consensus 260 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~i 339 (817)
++++.+ ...++|+++.+++++.++++++++++++++++.+... .+| ...+..++++++++|
T Consensus 226 ~~v~~~--~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~-----------~~~~~~~v~llv~ai 286 (884)
T TIGR01522 226 KMMQAI--EKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG------KDW-----------LEMFTISVSLAVAAI 286 (884)
T ss_pred HHhccC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCH-----------HHHHHHHHHHHHHHc
Confidence 999877 6678999999999999887766555544444432110 112 346778899999999
Q ss_pred cCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccC
Q 003468 340 PEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYN 419 (817)
Q Consensus 340 P~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 419 (817)
||+||++++++++.+++||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+.. .....++
T Consensus 287 P~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-----~~~~~~~ 361 (884)
T TIGR01522 287 PEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-----LNAVSLN 361 (884)
T ss_pred cchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-----ccCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999875421100 0111111
Q ss_pred CCCCccc-CC-CCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhh
Q 003468 420 PSDGRIE-GW-PVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRC 497 (817)
Q Consensus 420 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 497 (817)
+...... .. .....+.....++.++++||++..+..+++ ..|+|+|.|++.++++.|+..
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--~~g~p~e~All~~~~~~~~~~---------------- 423 (884)
T TIGR01522 362 QFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADT--LLGNPTDVALIELLMKFGLDD---------------- 423 (884)
T ss_pred CCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCC--cCCChHHHHHHHHHHHcCcHh----------------
Confidence 1111000 00 001123345667778889998866543333 358999999999998776521
Q ss_pred hhhccccccceEeeccCCCCceEEEEEeec-CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHH
Q 003468 498 CQLWNTLEQRFATLEFDRDRKSMGVLVNSS-SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSS 576 (817)
Q Consensus 498 ~~~~~~~~~~l~~~~F~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (817)
.+..+..++++||+|.||||+++++.. ++++++++|||||.++.+|+.+...+|...+++++.++.+.+.++++++
T Consensus 424 ---~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~ 500 (884)
T TIGR01522 424 ---LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500 (884)
T ss_pred ---HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHh
Confidence 112356788999999999999998763 5678899999999999999987766788888999889999999999999
Q ss_pred hhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECC
Q 003468 577 TALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITG 656 (817)
Q Consensus 577 ~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TG 656 (817)
+|+|++++||+++ +.+|+|+|+++|+||+||+++++|+.|+++|++++|+||
T Consensus 501 ~G~rvl~~A~~~~----------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTG 552 (884)
T TIGR01522 501 AGLRVIAFASGPE----------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552 (884)
T ss_pred cCCEEEEEEEEcC----------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECC
Confidence 9999999999853 357999999999999999999999999999999999999
Q ss_pred CCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHH--HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCC
Q 003468 657 DNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN--QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 734 (817)
Q Consensus 657 d~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg 734 (817)
|+..+|.++|+++|+..... ..++|++++.+.+ ....+ .+..+|+|++|+||..+++.+|+.|+.|+|+|||
T Consensus 553 D~~~tA~~ia~~~Gi~~~~~----~~v~g~~l~~~~~~~l~~~~--~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDG 626 (884)
T TIGR01522 553 DSQETAVSIARRLGMPSKTS----QSVSGEKLDAMDDQQLSQIV--PKVAVFARASPEHKMKIVKALQKRGDVVAMTGDG 626 (884)
T ss_pred CCHHHHHHHHHHcCCCCCCC----ceeEhHHhHhCCHHHHHHHh--hcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 99999999999999975432 3567888877632 22223 3678999999999999999999999999999999
Q ss_pred ccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 735 VNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 735 ~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
.||+|||++||||||||.+|+++++++||+++.+|+++.+++++++||++|+||++++.|.++.|+..++..+++.+
T Consensus 627 vND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 627 VNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred cccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999779999999999999999999999999999999999999999999999998877665544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-111 Score=1000.86 Aligned_cols=667 Identities=28% Similarity=0.462 Sum_probs=571.2
Q ss_pred ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Q 003468 23 TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDG 102 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 102 (817)
+.+.|..+.+++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|++|++++++++++++++.+
T Consensus 12 ~~~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~---- 86 (867)
T TIGR01524 12 LLKESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD---- 86 (867)
T ss_pred HHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh----
Confidence 56778899999999999986 7999999999999999999999888899999999999999999999999998763
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEec------CCccceeeecCCccCCcEEE
Q 003468 103 EEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTR------DGKKIPSLSAKELVPGDIVE 176 (817)
Q Consensus 103 ~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r------~g~~~~~i~~~dLv~GDII~ 176 (817)
.|.++++|+++++++.++++++|+|+++++++|+++.+..++|+| ||++ ++|+++||||||||.
T Consensus 87 ---------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~-~~I~~~eLv~GDiV~ 156 (867)
T TIGR01524 87 ---------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSM-DEVPIDALVPGDLIE 156 (867)
T ss_pred ---------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeE-EEEEhhcCCCCCEEE
Confidence 678889999999999999999999999999999999999999999 8998 899999999999999
Q ss_pred ecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccch
Q 003468 177 LKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEI 255 (817)
Q Consensus 177 l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~ 255 (817)
|++||+|||||+|++ +..+.||||+|||||.|+.|.+++.. ++.+..+.+|++|+||.|.+|.+.++|++||.+|.+
T Consensus 157 l~~Gd~VPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~ 234 (867)
T TIGR01524 157 LAAGDIIPADARVIS--ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWF 234 (867)
T ss_pred ECCCCEEcccEEEEe--cCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHH
Confidence 999999999999997 44689999999999999999987542 445567788999999999999999999999999999
Q ss_pred hhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHH
Q 003468 256 GKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALA 335 (817)
Q Consensus 256 g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll 335 (817)
|+|.+.+.+ ...++|+++.+++++.++..+++++++++++++.... .+| ...+.++++++
T Consensus 235 gki~~~v~~---~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~------~~~-----------~~~~~~al~l~ 294 (867)
T TIGR01524 235 GSLAIAATE---RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK------GDW-----------LEAFLFALAVA 294 (867)
T ss_pred HHHHHHhhC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc------CCH-----------HHHHHHHHHHH
Confidence 999998876 3457899999999999988877777766655542211 112 34577889999
Q ss_pred hhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecC
Q 003468 336 VAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQG 415 (817)
Q Consensus 336 v~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~ 415 (817)
+++|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 295 v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~------------ 362 (867)
T TIGR01524 295 VGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG------------ 362 (867)
T ss_pred HHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC------------
Confidence 99999999999999999999999999999999999999999999999999999999999998752210
Q ss_pred CccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhh
Q 003468 416 TTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVL 495 (817)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~ 495 (817)
.. ...++.++++++.. + ...+||+|.|++.++......
T Consensus 363 ----------------~~---~~~~l~~a~l~~~~--~------~~~~~p~~~Al~~~~~~~~~~--------------- 400 (867)
T TIGR01524 363 ----------------ET---SERVLKMAWLNSYF--Q------TGWKNVLDHAVLAKLDESAAR--------------- 400 (867)
T ss_pred ----------------CC---HHHHHHHHHHhCCC--C------CCCCChHHHHHHHHHHhhchh---------------
Confidence 00 11233333333321 1 114699999999987643210
Q ss_pred hhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHH
Q 003468 496 RCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMS 575 (817)
Q Consensus 496 ~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (817)
.....+.++..+||+|+||+|+++++..++...+++||+||.++++|+.+. .+|...+++++.++++.+.+++++
T Consensus 401 ----~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a 475 (867)
T TIGR01524 401 ----QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMN 475 (867)
T ss_pred ----hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHH
Confidence 011245677889999999999999986655688999999999999998764 467778899888889999999999
Q ss_pred HhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEEC
Q 003468 576 STALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVIT 655 (817)
Q Consensus 576 ~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~T 655 (817)
++|+|++++|||++..+..+ . ....|++|+|+|+++|+||+|++++++|++|+++||+++|+|
T Consensus 476 ~~G~rvlavA~~~~~~~~~~-------------~----~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiT 538 (867)
T TIGR01524 476 RQGIRVIAVATKTLKVGEAD-------------F----TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLT 538 (867)
T ss_pred hcCCEEEEEEEeccCccccc-------------c----cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEc
Confidence 99999999999976431100 0 011267899999999999999999999999999999999999
Q ss_pred CCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHH--HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcC
Q 003468 656 GDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN--QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGD 733 (817)
Q Consensus 656 Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GD 733 (817)
||+..+|.++|+++|+... ..++|.+++.+.+ ....+. +..+|+|++|+||.++|+.+|++|+.|+|+||
T Consensus 539 GD~~~tA~aIA~~lGI~~~------~v~~g~~l~~~~~~el~~~~~--~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GD 610 (867)
T TIGR01524 539 GDNEIVTARICQEVGIDAN------DFLLGADIEELSDEELARELR--KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGD 610 (867)
T ss_pred CCCHHHHHHHHHHcCCCCC------CeeecHhhhhCCHHHHHHHhh--hCeEEEECCHHHHHHHHHHHHhCCCEEEEECC
Confidence 9999999999999999632 3577877776622 222232 56799999999999999999999999999999
Q ss_pred CccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 734 GVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 734 g~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
|.||+|||++|||||||| +|+|+||++||+|+++|+|+.|+.++++||++|+||+|+++|.++.|+..+++++++.+
T Consensus 611 GvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~ 687 (867)
T TIGR01524 611 GINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASA 687 (867)
T ss_pred CcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999 89999999999999999999999999999999999999999999999999988776554
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-108 Score=981.34 Aligned_cols=710 Identities=58% Similarity=0.890 Sum_probs=579.3
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEE
Q 003468 75 ILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATV 154 (817)
Q Consensus 75 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V 154 (817)
+++||++|++++|+++++++++++++.. +......|+++++|++++++++.++++||+++++.+++|+++.+.+++|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~---~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~V 77 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEE---GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKV 77 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccc---cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 4789999999999999999999876542 1122347999999999999999999999999999999999998999999
Q ss_pred ecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCCCccceeee
Q 003468 155 TRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFA 233 (817)
Q Consensus 155 ~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~~~l~~ 233 (817)
+|+|++ ++|+++||||||||.|++||+|||||+|++ ++.+.||||+|||||.|+.|.++..+ +.....+++|++|+
T Consensus 78 iRdg~~-~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~--~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~ 154 (917)
T TIGR01116 78 LRDGRW-SVIKAKDLVPGDIVELAVGDKVPADIRVLS--LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFS 154 (917)
T ss_pred EECCEE-EEEEHHHCCCCCEEEECCCCEeeccEEEEE--ecceEEEcccccCCCCcccccccccCccccCcccccceeee
Confidence 999998 999999999999999999999999999997 34799999999999999999886443 22344567899999
Q ss_pred CcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 003468 234 GTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGW 313 (817)
Q Consensus 234 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 313 (817)
||.+.+|++.++|++||.+|.+|+|.+.+..+ ..+++|+++++++++..++.+++++++++|+++...+.......+|
T Consensus 155 GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~--~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (917)
T TIGR01116 155 GTLVVAGKARGVVVRTGMSTEIGKIRDEMRAA--EQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232 (917)
T ss_pred CCEEecceEEEEEEEeCCCCHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 99999999999999999999999999988876 6678999999999999998877777777766543322111111122
Q ss_pred CcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCcc
Q 003468 314 PRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQM 393 (817)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m 393 (817)
+..+...+..++++++++|||+||+++++++++++++|+++++++|+++++|+||++|+||||||||||+|+|
T Consensus 233 -------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m 305 (917)
T TIGR01116 233 -------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 305 (917)
T ss_pred -------HHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeE
Confidence 2334456667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeCCcCCccceeeecCCccCCCCCcccCCC--CCCCCHHHHHHHHHHhHhcCCeeeecC--CeeEeCCChhHHH
Q 003468 394 AVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWP--VGRMDANLQTIAKISAVCNDAGVEQSG--NHYVASGMPTEAA 469 (817)
Q Consensus 394 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~p~e~a 469 (817)
+|.+++..+..+.....+...+..|++......... ..........++.++++||++.+...+ ..+...|+|+|.|
T Consensus 306 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~A 385 (917)
T TIGR01116 306 SVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAA 385 (917)
T ss_pred EEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHH
Confidence 999999876433223334444555555332111100 001223456778889999998765422 2344569999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccc
Q 003468 470 LKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFV 549 (817)
Q Consensus 470 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~ 549 (817)
|+.++++.|+............ ........++..+++++++||+|+|||||++++. ++++.+|+|||||.|+++|+++
T Consensus 386 Ll~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~ 463 (917)
T TIGR01116 386 LKVLVEKMGLPATKNGVSSKRR-PALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHI 463 (917)
T ss_pred HHHHHHHcCCCchhcccccccc-cccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccce
Confidence 9999999887543211100000 0000011223456789999999999999999985 4678999999999999999988
Q ss_pred cccCCceeecCHHHHHHHHHHHHHHHH-hhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEec
Q 003468 550 QLLDGSVVELDQYSRDLILQSLQEMSS-TALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVG 628 (817)
Q Consensus 550 ~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~ 628 (817)
...+|...+++++.++++.+.+++|++ +|+||+++|||+++.+..... ..+...++.+|+||+|+|+++
T Consensus 464 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~----------~~~~~~~~~~e~~l~~lGl~~ 533 (917)
T TIGR01116 464 LNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDL----------LSDPANFEAIESDLTFIGVVG 533 (917)
T ss_pred ecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccc----------cccchhhhhhcCCcEEEEEee
Confidence 776788899999999999999999999 999999999998754211100 011123456799999999999
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 629 LRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 629 ~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
++||+|++++++|+.|+++|++++|+|||+..+|.++|+++|+..++..+....++|.++..+.+........+..+|+|
T Consensus 534 ~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar 613 (917)
T TIGR01116 534 MLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR 613 (917)
T ss_pred eeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe
Confidence 99999999999999999999999999999999999999999998665544445678888877633222222346789999
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhH
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNM 788 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 788 (817)
++|+||.++++.+|+.|+.|+|+|||.||+|||++|||||||| +|++.+|++||+++.+|+|..|++++++||++|+|+
T Consensus 614 ~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni 692 (917)
T TIGR01116 614 VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNM 692 (917)
T ss_pred cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 789 KAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 789 ~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
+++++|.+++|+..+++++++.+.
T Consensus 693 ~k~i~~~l~~ni~~~~~~~~~~~~ 716 (917)
T TIGR01116 693 KQFIRYMISSNIGEVVCIFLTAAL 716 (917)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHH
Confidence 999999999999999988877554
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-106 Score=946.86 Aligned_cols=616 Identities=31% Similarity=0.496 Sum_probs=524.6
Q ss_pred CCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHH
Q 003468 45 GLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILI 124 (817)
Q Consensus 45 GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i 124 (817)
|||++||++|+++||+|+++. +++++|+.|+++|++|++++++++++++++++ .|.++++++++++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------------~~~~~~~i~~~~~ 66 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------------NWVDFVIILGLLL 66 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------------chhhhhhhhhhhH
Confidence 899999999999999999987 44578899999999999999999999998864 5778889999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCC
Q 003468 125 VNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204 (817)
Q Consensus 125 ~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~L 204 (817)
++..++++||+++++++++|+++.+++++|+|||++ ++|+++||||||+|.|++||+|||||+|++ +..+.||||+|
T Consensus 67 i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~-~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~--g~~~~VDeS~L 143 (755)
T TIGR01647 67 LNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKW-QEIPASELVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAAL 143 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEE-EEEEhhhCcCCCEEEECCCCEEeceEEEEe--cCceEEEcccc
Confidence 999999999999999999999999999999999998 899999999999999999999999999996 33489999999
Q ss_pred CCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHH
Q 003468 205 TGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEV 284 (817)
Q Consensus 205 TGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~ 284 (817)
||||.||.|.++ +.+|+||.|.+|++.++|++||.+|.+|+|.++++++ +.+++|+++.+++++.+
T Consensus 144 TGES~PV~K~~~------------~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~--~~~~~~lq~~~~~i~~~ 209 (755)
T TIGR01647 144 TGESLPVTKKTG------------DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQST--ETGSGHLQKILSKIGLF 209 (755)
T ss_pred cCCccceEeccC------------CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhcc--CCCCCcHHHHHHHHHHH
Confidence 999999999875 6799999999999999999999999999999999887 66788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhcccc
Q 003468 285 LTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAL 364 (817)
Q Consensus 285 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~il 364 (817)
+++++++++++++++++.... .+| ...+.+++++++++|||+||++++++++.++++|+|+|++
T Consensus 210 ~~~~~~~~~~i~~~~~~~~~~-----~~~-----------~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gil 273 (755)
T TIGR01647 210 LIVLIGVLVLIELVVLFFGRG-----ESF-----------REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAI 273 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-----CCH-----------HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeE
Confidence 988888877777766543110 111 4467788999999999999999999999999999999999
Q ss_pred ccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHH
Q 003468 365 VRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKIS 444 (817)
Q Consensus 365 vk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (817)
+|+++++|+||++|+||||||||||+|+|+|.+++..+.. ++ ...++..+
T Consensus 274 vk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------------~~-----------------~~~~l~~a 323 (755)
T TIGR01647 274 VTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-------------FD-----------------KDDVLLYA 323 (755)
T ss_pred EcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC-------------CC-----------------HHHHHHHH
Confidence 9999999999999999999999999999999998864310 00 11234444
Q ss_pred hHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEE
Q 003468 445 AVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLV 524 (817)
Q Consensus 445 ~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv 524 (817)
++|++. ..+||+|.|++.++.+.+. ....++++..+||++.+|+|++++
T Consensus 324 ~~~~~~----------~~~~pi~~Ai~~~~~~~~~---------------------~~~~~~~~~~~pf~~~~k~~~~~v 372 (755)
T TIGR01647 324 ALASRE----------EDQDAIDTAVLGSAKDLKE---------------------ARDGYKVLEFVPFDPVDKRTEATV 372 (755)
T ss_pred HHhCCC----------CCCChHHHHHHHHHHHhHH---------------------HHhcCceEEEeccCCCCCeEEEEE
Confidence 555421 1478999999998764321 012345678899999999999998
Q ss_pred eecC-CcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcc
Q 003468 525 NSSS-GNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHP 603 (817)
Q Consensus 525 ~~~~-~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~ 603 (817)
+..+ |+.++++||+||.++++|+.. +..++++.+.+++++.+|+|++++||++.
T Consensus 373 ~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~~-------------- 427 (755)
T TIGR01647 373 EDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTDE-------------- 427 (755)
T ss_pred EeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEcC--------------
Confidence 8654 677889999999999999732 23456678888999999999999999731
Q ss_pred hhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcccccccc
Q 003468 604 AHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSI 683 (817)
Q Consensus 604 ~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 683 (817)
|.+|+|+|+++|+||+||+++++|++|+++||+++|+|||++.+|.++|+++||..... -.....
T Consensus 428 --------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~-~~~~l~ 492 (755)
T TIGR01647 428 --------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIY-TADVLL 492 (755)
T ss_pred --------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc-CHHHhc
Confidence 46899999999999999999999999999999999999999999999999999964200 000111
Q ss_pred ChhHHHHH--HHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhh
Q 003468 684 TGKEFMDI--HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEA 761 (817)
Q Consensus 684 ~~~~~~~~--~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ 761 (817)
++++.+.+ .+..+.+. +..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| +|+|+||++
T Consensus 493 ~~~~~~~~~~~~~~~~~~--~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkea 569 (755)
T TIGR01647 493 KGDNRDDLPSGELGEMVE--DADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSA 569 (755)
T ss_pred CCcchhhCCHHHHHHHHH--hCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHh
Confidence 22222222 11222222 45699999999999999999999999999999999999999999999999 799999999
Q ss_pred cCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 762 SDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 762 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
||+|+++|+++.|+.++++||++|+||+|++.|.++.|+..+++++++.+
T Consensus 570 ADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l 619 (755)
T TIGR01647 570 ADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLIL 619 (755)
T ss_pred CCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876665543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-107 Score=878.37 Aligned_cols=728 Identities=31% Similarity=0.486 Sum_probs=613.1
Q ss_pred ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Q 003468 23 TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDG 102 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 102 (817)
..+.|.++.+|++++|.+|..+|||.+++.+++.+.|+|.+++|+..+-|..|.+|+++.+.+++|++++++++.+.+..
T Consensus 36 ~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~ 115 (1019)
T KOG0203|consen 36 SMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQA 115 (1019)
T ss_pred eeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999887754
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCc
Q 003468 103 EEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDK 182 (817)
Q Consensus 103 ~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~ 182 (817)
.....-+....+.++++..++++..+..+||+.+..+.++.++++.|..++|+|+|+. ..+.++||||||+|.++-|++
T Consensus 116 s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k-~~i~~eelVvGD~v~vk~Gdr 194 (1019)
T KOG0203|consen 116 STEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEK-MTINAEELVVGDLVEVKGGDR 194 (1019)
T ss_pred ccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeeccee-EEechhhcccccceeeccCCc
Confidence 3322223345666777777888888999999999999999999999999999999998 899999999999999999999
Q ss_pred ccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHh
Q 003468 183 VPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQI 262 (817)
Q Consensus 183 iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 262 (817)
||||.+++. +..++||+|+|||||.|....+....++. .+.+|+.|.+|.+++|.+.++|++||.+|.+|+|+.+-
T Consensus 195 VPADiRiis--~~g~~vdnsslTGesEP~~~~~~~t~~~~--~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~ 270 (1019)
T KOG0203|consen 195 VPADIRIIS--ATGCKVDNSSLTGESEPQTRSPEFTHENP--LETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLA 270 (1019)
T ss_pred ccceeEEEE--ecceeEeccccccccCCccCCccccccCc--hhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhh
Confidence 999999997 57799999999999999998876543333 77889999999999999999999999999999999876
Q ss_pred hhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCc
Q 003468 263 HEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEG 342 (817)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~ 342 (817)
... +..++|++..++++..++..+++.+++.+|++..... .+| ...+.+.++++++.+|+|
T Consensus 271 ~~~--~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g------y~~-----------l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 271 SGL--EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG------YEW-----------LRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred ccC--CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc------chh-----------HHHhhhhheeEEecCcCC
Confidence 655 7788999999999999888877777777665554321 122 334445788999999999
Q ss_pred hHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCC
Q 003468 343 LPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSD 422 (817)
Q Consensus 343 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (817)
|+.+++.++..-.+||+++++++|++.+.|+||..++||+|||||||+|+|+|.++|..+.-......-+..+..+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~---- 407 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSF---- 407 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccc----
Confidence 9999999999999999999999999999999999999999999999999999999998764221111000111111
Q ss_pred CcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCC-----eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhh
Q 003468 423 GRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGN-----HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRC 497 (817)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 497 (817)
...+.....+..++.+||.+.....+. .....|++.|.||+++++..-..
T Consensus 408 --------~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~----------------- 462 (1019)
T KOG0203|consen 408 --------DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGS----------------- 462 (1019)
T ss_pred --------cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcch-----------------
Confidence 123566778899999999987764221 23446899999999998753221
Q ss_pred hhhccccccceEeeccCCCCceEEEEEeecC---CcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHH
Q 003468 498 CQLWNTLEQRFATLEFDRDRKSMGVLVNSSS---GNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEM 574 (817)
Q Consensus 498 ~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~---~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (817)
....+.....+.+.||+|.+|..-.+.+..+ .+..+.+|||||.++++|+.+.. +|+..|+++..++.+.+...++
T Consensus 463 ~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~l 541 (1019)
T KOG0203|consen 463 VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLEL 541 (1019)
T ss_pred HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHh
Confidence 1223455677899999999999988877544 46778899999999999998766 8899999999999999999999
Q ss_pred HHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEE
Q 003468 575 SSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVI 654 (817)
Q Consensus 575 ~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~ 654 (817)
...|.||++||++.++++ ++.... ..+......--.+|.|+|++++-||+|..+++++..|+.+||+++|+
T Consensus 542 g~~GerVlgF~~~~l~~~--~~p~~~-------~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimV 612 (1019)
T KOG0203|consen 542 GGLGERVLGFCDLELPDE--KFPRGF-------QFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMV 612 (1019)
T ss_pred hhcchHHHHHHHHhcchh--cCCCce-------EeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEE
Confidence 999999999999887653 111110 00111112224689999999999999999999999999999999999
Q ss_pred CCCCHhhHHHHHHHhCCCCCCccc--------------------cccccChhHHHHH--HHHhHhhccCCceEEEecCcc
Q 003468 655 TGDNKNTAEAICREIGVFGAHEDI--------------------SSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 655 TGd~~~~a~~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~r~~p~ 712 (817)
|||++.||+++|+..||....... ...+++|.|+.++ ++....+.+....||||.+|+
T Consensus 613 TgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPq 692 (1019)
T KOG0203|consen 613 TGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQ 692 (1019)
T ss_pred ecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCcc
Confidence 999999999999999986532211 1235778888777 344556666778999999999
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFI 792 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i 792 (817)
||..||+..|+.|..|+++|||.||+||||+||||||||.+|+|++|++||+|++||||++|+..+++||.+|+|+||.|
T Consensus 693 QKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsI 772 (1019)
T KOG0203|consen 693 QKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSI 772 (1019)
T ss_pred ceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHhhhccc
Q 003468 793 RYGFCHLENHCLSLELNLDKA 813 (817)
Q Consensus 793 ~~~~~~n~~~~~~~~~~~~~~ 813 (817)
.|.+++|+.++.+.++|++..
T Consensus 773 AYTLTsNipEI~PfL~fi~~g 793 (1019)
T KOG0203|consen 773 AYTLTSNIPEITPFLLFILFG 793 (1019)
T ss_pred HHHHHhcchhHhHHHHHHHhC
Confidence 999999999999999888754
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-103 Score=950.77 Aligned_cols=673 Identities=22% Similarity=0.307 Sum_probs=530.7
Q ss_pred CCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHH
Q 003468 43 KIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLI 122 (817)
Q Consensus 43 ~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 122 (817)
..|||.+|+++|+++||+|+++.++ +++|++++++|.+|++++++++++++++. .+|+++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------------~~~~~~~~i~~i 202 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD-------------EYYYYSLCIVFM 202 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh-------------hhHHHHHHHHHH
Confidence 4699999999999999999998864 79999999999999999888876665532 167889999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEec--CCCcccccEEEEeecCCeEEEe
Q 003468 123 LIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELK--VGDKVPADMRLLRLTSSTVRVE 200 (817)
Q Consensus 123 ~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~--~G~~iPaD~~ll~~~~g~~~Vd 200 (817)
++++.+++.++++++.+.++++.. .+..++|+|+|++ ++|+++||||||||.|+ +|++|||||+|++ |++.||
T Consensus 203 ~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~-~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~Vd 277 (1054)
T TIGR01657 203 SSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKW-VTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVN 277 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEE-EEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEe
Confidence 999999999999999888888755 4578999999998 99999999999999999 9999999999995 689999
Q ss_pred ecCCCCCccccccccccCC--C----CCCCCCccceeeeCcEEee-------CeEEEEEeeeCCccchhhhHhHhhhhcc
Q 003468 201 QGSLTGESEAVSKTVKTVP--E----NSDIQGKKCMVFAGTTVVN-------GTCTCLVTNTGMNTEIGKVHSQIHEASQ 267 (817)
Q Consensus 201 es~LTGEs~pv~K~~~~~~--~----~~~~~~~~~~l~~Gt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 267 (817)
||+|||||.|+.|.+.+.. . .....+++|++|+||.|++ |.+.++|++||.+|..|++.+.+..+
T Consensus 278 ES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~-- 355 (1054)
T TIGR01657 278 ESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355 (1054)
T ss_pred cccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCC--
Confidence 9999999999999885431 1 1123467899999999995 78999999999999999999998876
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHH
Q 003468 268 NEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVI 347 (817)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~ 347 (817)
....+++++.+.++...+..++++.++++++.... .+. .....+..+++++++++|++||+++
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~--------~~~---------~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIK--------DGR---------PLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCC---------cHHHHHHHHHHHHHhhcCchHHHHH
Confidence 56678888888777665544433322222221111 111 1144577889999999999999999
Q ss_pred HHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccC
Q 003468 348 TTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEG 427 (817)
Q Consensus 348 ~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (817)
+++++++++||+|+|++||++.++|++|++|++|||||||||+|+|+|.+++..+.... . ......
T Consensus 419 ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~----~--~~~~~~-------- 484 (1054)
T TIGR01657 419 SIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQE----F--LKIVTE-------- 484 (1054)
T ss_pred HHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccc----c--cccccc--------
Confidence 99999999999999999999999999999999999999999999999999987542110 0 000000
Q ss_pred CCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCch---hhhhhhhhcccc
Q 003468 428 WPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPE---DVLRCCQLWNTL 504 (817)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~ 504 (817)
........+..+++.||+.... ++ ...|||+|.|+++++. +............. .+. .......
T Consensus 485 ----~~~~~~~~~~~~~a~C~~~~~~--~~--~~~Gdp~E~al~~~~~---~~~~~~~~~~~~~~~~~~i~--~~~~~~~ 551 (1054)
T TIGR01657 485 ----DSSLKPSITHKALATCHSLTKL--EG--KLVGDPLDKKMFEATG---WTLEEDDESAEPTSILAVVR--TDDPPQE 551 (1054)
T ss_pred ----ccccCchHHHHHHHhCCeeEEE--CC--EEecCHHHHHHHHhCC---CEEECCCCccccccccccee--ccCCCce
Confidence 0001223455667899986532 22 4579999999998753 21110000000000 000 0001235
Q ss_pred ccceEeeccCCCCceEEEEEeecC-CcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceee
Q 003468 505 EQRFATLEFDRDRKSMGVLVNSSS-GNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLG 583 (817)
Q Consensus 505 ~~~l~~~~F~s~~k~msvvv~~~~-~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~ 583 (817)
+.+++++||+|++|||||+++..+ ++.++|+|||||.|+++|+... .++.+.+.+++|+++|+||+|
T Consensus 552 ~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~------------~p~~~~~~~~~~a~~G~RVLa 619 (1054)
T TIGR01657 552 LSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET------------VPSDYQEVLKSYTREGYRVLA 619 (1054)
T ss_pred EEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC------------CChhHHHHHHHHHhcCCEEEE
Confidence 678999999999999999998654 4578999999999999998421 125677889999999999999
Q ss_pred eeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH
Q 003468 584 FAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE 663 (817)
Q Consensus 584 ~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 663 (817)
+|||++.... +. ......++.+|+||+|+|+++|+||+||+++++|+.|+++||+++|+|||++.||.
T Consensus 620 lA~k~l~~~~--~~----------~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~ 687 (1054)
T TIGR01657 620 LAYKELPKLT--LQ----------KAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAV 687 (1054)
T ss_pred EEEeecCccc--hh----------hhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 9999875310 00 01112356689999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccc-------------------------------------------------cccccChhHHHHHHH-
Q 003468 664 AICREIGVFGAHEDI-------------------------------------------------SSQSITGKEFMDIHN- 693 (817)
Q Consensus 664 ~ia~~~gi~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~~- 693 (817)
++|+++||...+..+ +..+++|+++..+.+
T Consensus 688 ~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~ 767 (1054)
T TIGR01657 688 HVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH 767 (1054)
T ss_pred HHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHh
Confidence 999999997543110 023567888766521
Q ss_pred ----HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccC
Q 003468 694 ----QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADD 769 (817)
Q Consensus 694 ----~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~ 769 (817)
....+. +..||||++|+||.++|+.+|+.|+.|+|+|||.||+||||+||||||||+ + |+ ..+||+++.++
T Consensus 768 ~~~~l~~~~~--~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~-~-da-s~AA~f~l~~~ 842 (1054)
T TIGR01657 768 SPELLLRLLS--HTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSE-A-EA-SVAAPFTSKLA 842 (1054)
T ss_pred hHHHHHHHHh--cCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecc-c-cc-eeecccccCCC
Confidence 222333 567999999999999999999999999999999999999999999999994 2 44 58999999999
Q ss_pred CccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhh
Q 003468 770 NFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELN 809 (817)
Q Consensus 770 ~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 809 (817)
++++|+++|++||+++.|++++++|.+.+++..++++++.
T Consensus 843 ~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l 882 (1054)
T TIGR01657 843 SISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSIL 882 (1054)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887776553
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-96 Score=893.84 Aligned_cols=724 Identities=23% Similarity=0.254 Sum_probs=545.6
Q ss_pred cCCCccCCCCCCCH---HHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 003468 58 YGYNELEKHEGTSI---FQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQE 134 (817)
Q Consensus 58 ~G~N~~~~~~~~~~---~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e 134 (817)
|.+|.+...|++.+ ++.+++||+++.+++|+++++++++..+.+. ..+...++++++++++.+.+.+++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--------~~~t~~~pL~~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--------YRGTSIVPLAFVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--------CccHhHHhHHHHHHHHHHHHHHHH
Confidence 67899988888775 8999999999999999999999998654322 122334455556667788899999
Q ss_pred hHHHHHHHHHHhhcccceEEecC-CccceeeecCCccCCcEEEecCCCcccccEEEEeecC--CeEEEeecCCCCCcccc
Q 003468 135 SNAEKALEALKEIQSEQATVTRD-GKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTS--STVRVEQGSLTGESEAV 211 (817)
Q Consensus 135 ~~~~~~~~~l~~~~~~~~~V~r~-g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~--g~~~Vdes~LTGEs~pv 211 (817)
++++++.+.+ +++.++|+|+ |++ ++++++||+|||||.|++||+||||++|+++++ |.|+||||+|||||.|+
T Consensus 73 ~~r~~~d~~~---n~~~~~v~~~~~~~-~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~ 148 (1057)
T TIGR01652 73 IRRRRRDKEV---NNRLTEVLEGHGQF-VEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLK 148 (1057)
T ss_pred HHHHHhHHHH---hCcEEEEECCCCcE-EEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecce
Confidence 9888877654 4568999997 787 899999999999999999999999999998764 78999999999999999
Q ss_pred ccccccCC--------------------C----------------CCCCCCccceeeeCcEEee-CeEEEEEeeeCCccc
Q 003468 212 SKTVKTVP--------------------E----------------NSDIQGKKCMVFAGTTVVN-GTCTCLVTNTGMNTE 254 (817)
Q Consensus 212 ~K~~~~~~--------------------~----------------~~~~~~~~~~l~~Gt~v~~-g~~~~~V~~tG~~T~ 254 (817)
.|.+.+.. | .....+.+|++++||.+.+ |++.|+|++||.+|+
T Consensus 149 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk 228 (1057)
T TIGR01652 149 LRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTK 228 (1057)
T ss_pred EeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhh
Confidence 99864211 1 1123456899999999999 999999999999999
Q ss_pred hhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcc----cccchhhHHHHHHH
Q 003468 255 IGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRN----FKFSFEKCTYYFEI 330 (817)
Q Consensus 255 ~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 330 (817)
+++... .. ..+.++++++++++..++..+.++++++++++...+... .....|... .......++..|..
T Consensus 229 ~~~n~~---~~--~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~ 302 (1057)
T TIGR01652 229 LMRNAT---QA--PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDA-HGKDLWYIRLDVSERNAAANGFFSFLT 302 (1057)
T ss_pred hhhcCC---CC--cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecc-cCCCccceecCcccccchhHHHHHHHH
Confidence 876532 22 456799999999999888877777777776654332210 000122111 01112233446778
Q ss_pred HHHHHhhhccCchHHHHHHHHHhHH------HHHhhc----cccccccccccccCCeeEEecCCCcccccCccEEEEEEE
Q 003468 331 AVALAVAAIPEGLPAVITTCLALGT------RKMAQK----NALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVA 400 (817)
Q Consensus 331 ~i~llv~~iP~~L~~~~~~~~~~~~------~~l~k~----~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~ 400 (817)
++.++..++|++|+++++++..+++ .+|.++ ++++|+.+++|+||+|++||+|||||||+|+|+++++++
T Consensus 303 ~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i 382 (1057)
T TIGR01652 303 FLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSI 382 (1057)
T ss_pred HHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEE
Confidence 8889999999999999999999999 788764 599999999999999999999999999999999999998
Q ss_pred eCCcCCccce----eeecCCc-cCCCC-------C--------cccCC-CCCCCCHHHHHHHHHHhHhcCCeeee-cCC-
Q 003468 401 VGSRAGTLRS----FNVQGTT-YNPSD-------G--------RIEGW-PVGRMDANLQTIAKISAVCNDAGVEQ-SGN- 457 (817)
Q Consensus 401 ~~~~~~~~~~----~~~~~~~-~~~~~-------~--------~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~- 457 (817)
.+..|+.... ....... +.+.. . ..... ...........++.++++||++.++. .++
T Consensus 383 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~ 462 (1057)
T TIGR01652 383 AGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGP 462 (1057)
T ss_pred CCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCC
Confidence 7765432100 0000000 00000 0 00000 00011234567888999999987663 111
Q ss_pred --eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEE
Q 003468 458 --HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLV 535 (817)
Q Consensus 458 --~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~ 535 (817)
..+..++|+|.||+.+|+..|+......... ..+..........+++++.+||+|+||||||+++.+++++.+|+
T Consensus 463 ~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~---~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~ 539 (1057)
T TIGR01652 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKS---ISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLC 539 (1057)
T ss_pred CceEEEccCCcHHHHHHHHHHCCCEEEEecCCc---eEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEE
Confidence 3355799999999999999998654221110 00000011123457889999999999999999998888889999
Q ss_pred eCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccc-cccC----CCCCcchhhccCC
Q 003468 536 KGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREF-ETYD----GDEDHPAHQLLLN 610 (817)
Q Consensus 536 KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~-~~~~----~~~~~~~~~~~~~ 610 (817)
|||||.|+++|+.. ++..++.+.+.+++|+.+|+||+++|||.++++. .++. .......++....
T Consensus 540 KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~ 609 (1057)
T TIGR01652 540 KGADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKL 609 (1057)
T ss_pred eCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 99999999999731 2345677888999999999999999999986531 1111 0000000000001
Q ss_pred CCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc------------
Q 003468 611 PTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI------------ 678 (817)
Q Consensus 611 ~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------ 678 (817)
...++.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+...+..+
T Consensus 610 ~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~ 689 (1057)
T TIGR01652 610 DVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR 689 (1057)
T ss_pred HHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH
Confidence 11234679999999999999999999999999999999999999999999999999999998654321
Q ss_pred -------------------------cccccChhHHHHHHH------HhHhhccCCceEEEecCcccHHHHHHHHhcC-CC
Q 003468 679 -------------------------SSQSITGKEFMDIHN------QKNYLRQDGGLLFSRAEPRHKQEIVRLLKED-GE 726 (817)
Q Consensus 679 -------------------------~~~~~~~~~~~~~~~------~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-~~ 726 (817)
...+++|+++..+.+ ....+..++..||||++|+||.++|+.+|+. |+
T Consensus 690 ~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~ 769 (1057)
T TIGR01652 690 SVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGK 769 (1057)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCC
Confidence 012577777765422 1223444567899999999999999999998 99
Q ss_pred EEEEEcCCccCHHHhhhCCceEEeCCCccH--HHHhhcCEEeccCCccHHHHHH-HHhHHHHHhHHHHHHHHhhhhHHHH
Q 003468 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTE--VAKEASDMVLADDNFGTIVAAV-GEGRSIYNNMKAFIRYGFCHLENHC 803 (817)
Q Consensus 727 ~v~~~GDg~ND~~~l~~A~vgiamg~~~~~--~ak~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~n~~~~ 803 (817)
.|+|+|||.||++||++|||||++. |.+ .|+.+||+++.+ |..+.+++ .|||++|+|+++++.|.|++|+..+
T Consensus 770 ~vl~iGDG~ND~~mlk~AdVGIgi~--g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~ 845 (1057)
T TIGR01652 770 TTLAIGDGANDVSMIQEADVGVGIS--GKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFA 845 (1057)
T ss_pred eEEEEeCCCccHHHHhhcCeeeEec--ChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999763 555 589999999986 99999987 8999999999999999999999999
Q ss_pred HHHHhhhcccccc
Q 003468 804 LSLELNLDKAIFF 816 (817)
Q Consensus 804 ~~~~~~~~~~~f~ 816 (817)
++++++.+.++|+
T Consensus 846 ~~~~~~~~~~~~s 858 (1057)
T TIGR01652 846 IIQFWYSFYNGFS 858 (1057)
T ss_pred HHHHHHHHHHcCC
Confidence 9999988877664
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-93 Score=855.89 Aligned_cols=725 Identities=22% Similarity=0.243 Sum_probs=545.5
Q ss_pred hhcCCCccCCCCCCC---HHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 003468 56 EIYGYNELEKHEGTS---IFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIW 132 (817)
Q Consensus 56 ~~~G~N~~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~ 132 (817)
.+|..|.+...|++. +++.+++||+++.+++|+++++++++..+... ..+...+++++++++..+.+.+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--------~~~t~~~PL~~vl~v~~ike~~ 156 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--------GRGASILPLAFVLLVTAVKDAY 156 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--------CcchHHHHHHHHHHHHHHHHHH
Confidence 368999999888864 78999999999999999999999987654322 1334456677777777788888
Q ss_pred HHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecC--CeEEEeecCCCCCccc
Q 003468 133 QESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTS--STVRVEQGSLTGESEA 210 (817)
Q Consensus 133 ~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~--g~~~Vdes~LTGEs~p 210 (817)
++++++++.+.. ++..++|+|+|.+ ++++|++|+|||+|+|++||+||||++|+++++ |.|+||||+|||||.|
T Consensus 157 Ed~~r~k~d~~~---N~~~~~v~~~~~~-~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~ 232 (1178)
T PLN03190 157 EDWRRHRSDRIE---NNRLAWVLVDDQF-QEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232 (1178)
T ss_pred HHHHHHHhHHhh---cCcEEEEEECCeE-EEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeee
Confidence 888887776655 3568999999998 899999999999999999999999999998664 7899999999999999
Q ss_pred cccccccCC------------------CCC---------------CCCCccceeeeCcEEeeC-eEEEEEeeeCCccchh
Q 003468 211 VSKTVKTVP------------------ENS---------------DIQGKKCMVFAGTTVVNG-TCTCLVTNTGMNTEIG 256 (817)
Q Consensus 211 v~K~~~~~~------------------~~~---------------~~~~~~~~l~~Gt~v~~g-~~~~~V~~tG~~T~~g 256 (817)
+.|.+++.. |+. ...+.+|++++||.+.+. ++.|+|++||.+|++.
T Consensus 233 k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~ 312 (1178)
T PLN03190 233 KTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM 312 (1178)
T ss_pred eEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh
Confidence 999875321 110 123667999999999985 8999999999999953
Q ss_pred hhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccccCCCCccc--------ccch---
Q 003468 257 KVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLT----WEYVDGWPRNF--------KFSF--- 321 (817)
Q Consensus 257 ~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~--------~~~~--- 321 (817)
++......+.+++++.++++..++..+.+++|+++.++...+... ..| -.|.... ...+
T Consensus 313 -----~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~y-l~~~~~~~~~~~~~~~~~~~~~ 386 (1178)
T PLN03190 313 -----LNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDT-IPFYRRKDFSEGGPKNYNYYGW 386 (1178)
T ss_pred -----hcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc-cccccccccccccccccccchh
Confidence 333322467799999999999888877777777766654332210 001 0111100 0000
Q ss_pred -hhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhcc----------ccccccccccccCCeeEEecCCCccccc
Q 003468 322 -EKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKN----------ALVRKLPSVETLGCTTVICSDKTGTLTT 390 (817)
Q Consensus 322 -~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~----------ilvk~~~~le~lg~v~~I~~DKTGTLT~ 390 (817)
...+..|..++.++..++|.+|+++++++...++.+|.++. +.+|+.+.+|+||+|++||+|||||||+
T Consensus 387 ~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~ 466 (1178)
T PLN03190 387 GWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTE 466 (1178)
T ss_pred hHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcccc
Confidence 01123344556677799999999999999988788887655 7899999999999999999999999999
Q ss_pred CccEEEEEEEeCCcCCcccee----------eecCCccCCCCCcc------cCCC---CCCCCHHHHHHHHHHhHhcCCe
Q 003468 391 NQMAVTKLVAVGSRAGTLRSF----------NVQGTTYNPSDGRI------EGWP---VGRMDANLQTIAKISAVCNDAG 451 (817)
Q Consensus 391 ~~m~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~l~~~~~ 451 (817)
|+|+++++++.+..|+..... ...+..+.+..... .... .......+..++.++++||++.
T Consensus 467 N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~ 546 (1178)
T PLN03190 467 NKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIV 546 (1178)
T ss_pred ceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCce
Confidence 999999999987666421110 00111111110000 0000 0011233567889999999987
Q ss_pred eee-cC--C-----eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEE
Q 003468 452 VEQ-SG--N-----HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVL 523 (817)
Q Consensus 452 ~~~-~~--~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvv 523 (817)
++. ++ + ..+..++|+|.||+.+|.+.|+....+... .+..........+++++.+||+|+||||||+
T Consensus 547 ~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~-----~i~i~~~~~~~~~~il~~~pF~S~rKrMSvI 621 (1178)
T PLN03190 547 PIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSG-----HIVIDIHGERQRFNVLGLHEFDSDRKRMSVI 621 (1178)
T ss_pred eeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCC-----eEEEeeccceecceeEEEecccccccEEEEE
Confidence 642 11 1 235667999999999999999865543211 1111122234578899999999999999999
Q ss_pred EeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccccc-ccccCC----
Q 003468 524 VNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLRE-FETYDG---- 598 (817)
Q Consensus 524 v~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~-~~~~~~---- 598 (817)
++.++++..+|+|||||.|+++|+... ++..++.+.+.+++|+++|+|||++|||.++++ +.+|..
T Consensus 622 v~~~~~~~~l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 622 LGCPDKTVKVFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred EEcCCCcEEEEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 998788899999999999999997431 223456788899999999999999999998653 222211
Q ss_pred CCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc
Q 003468 599 DEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI 678 (817)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~ 678 (817)
.......+........+.+|+||+++|+++++|++|++++++|+.|+++||++||+|||+..||.+||+.||+...+...
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 00000011111112235689999999999999999999999999999999999999999999999999999997543210
Q ss_pred ---------------------------------------------cccccChhHHHHHH------HHhHhhccCCceEEE
Q 003468 679 ---------------------------------------------SSQSITGKEFMDIH------NQKNYLRQDGGLLFS 707 (817)
Q Consensus 679 ---------------------------------------------~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~ 707 (817)
...+++|..+..+. ........+..+|||
T Consensus 773 i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~c 852 (1178)
T PLN03190 773 IIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCC 852 (1178)
T ss_pred EEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEe
Confidence 01346677666552 122334455677999
Q ss_pred ecCcccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCceEEeCCCccH--HHHhhcCEEeccCCccHHHHHH-HHhHH
Q 003468 708 RAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVAMGIAGTE--VAKEASDMVLADDNFGTIVAAV-GEGRS 783 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~--~ak~~ad~vl~~~~~~~i~~~i-~~gR~ 783 (817)
|++|.||.++|+.+|+. ++.|+|+|||.||++||++||||| |..|+| .|..+||+++.. |..+.+++ .|||+
T Consensus 853 R~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~ 928 (1178)
T PLN03190 853 RVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHW 928 (1178)
T ss_pred cCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHH
Confidence 99999999999999987 579999999999999999999999 556777 789999999987 77788874 69999
Q ss_pred HHHhHHHHHHHHhhhhHHHHHHHHhhhcccccc
Q 003468 784 IYNNMKAFIRYGFCHLENHCLSLELNLDKAIFF 816 (817)
Q Consensus 784 ~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f~ 816 (817)
+|+|+.++++|.|++|+.+++++++|.+.++||
T Consensus 929 ~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fS 961 (1178)
T PLN03190 929 NYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFT 961 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999886
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-91 Score=789.03 Aligned_cols=559 Identities=23% Similarity=0.328 Sum_probs=452.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHH----HhHHHHHHHHHHhhccc-c
Q 003468 77 EQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQ----ESNAEKALEALKEIQSE-Q 151 (817)
Q Consensus 77 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~----e~~~~~~~~~l~~~~~~-~ 151 (817)
.+|++|+.++++++++++++++.+....+. ..+ ..++++.|+++++++.+++.|+ |+|++++++.|+++.++ +
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~-~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~ 105 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQ-ESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMK 105 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhccc-ccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 467899999999999999988766321111 111 1234556666666666666666 78999999999998876 6
Q ss_pred eE-EecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccce
Q 003468 152 AT-VTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCM 230 (817)
Q Consensus 152 ~~-V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~ 230 (817)
++ |.|||++ ++|++++|+|||+|.|++||+|||||+|++ |...||||+|||||.||.|.++. ++ +.
T Consensus 106 a~~v~rdg~~-~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~--------d~-~~ 172 (673)
T PRK14010 106 ARRIKQDGSY-EMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG--------DF-DN 172 (673)
T ss_pred EEEEEeCCEE-EEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC--------cc-Ce
Confidence 75 7799998 899999999999999999999999999996 56799999999999999999861 11 33
Q ss_pred eeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 003468 231 VFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYV 310 (817)
Q Consensus 231 l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 310 (817)
+|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..+..+...++. +++++++|+..+..+
T Consensus 173 V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a--~~~ktp~e~~l~~l~~~l~i--i~l~~~~~~~~~~~~------ 242 (673)
T PRK14010 173 VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGA--TRKKTPNEIALFTLLMTLTI--IFLVVILTMYPLAKF------ 242 (673)
T ss_pred eecCceeecceEEEEEEEecccCHHHHHHHHHhhc--cccCCHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhh------
Confidence 99999999999999999999999999999999988 66789999776554433322 222222222111000
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCccccc
Q 003468 311 DGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTT 390 (817)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~ 390 (817)
.++ ...+.+++++++++|||+|+..++++.+.+++||+|+|+++|+++++|+||++|+||||||||||+
T Consensus 243 ~~~-----------~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~ 311 (673)
T PRK14010 243 LNF-----------NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITY 311 (673)
T ss_pred ccH-----------HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCC
Confidence 011 234566778888899999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHH
Q 003468 391 NQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAAL 470 (817)
Q Consensus 391 ~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al 470 (817)
|++.+.++...+. .....++..+.+|+.. ..||++.|+
T Consensus 312 Gn~~~~~~~~~~~-------------------------------~~~~~ll~~a~~~~~~-----------s~~P~~~AI 349 (673)
T PRK14010 312 GNRMADAFIPVKS-------------------------------SSFERLVKAAYESSIA-----------DDTPEGRSI 349 (673)
T ss_pred CCeEEEEEEeCCC-------------------------------ccHHHHHHHHHHhcCC-----------CCChHHHHH
Confidence 8887776543210 1112344555566643 248999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhcccccc
Q 003468 471 KVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQ 550 (817)
Q Consensus 471 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~ 550 (817)
+.++++.++... ......+||++++|+|++.++ + ..+.||+++.++++|+.
T Consensus 350 v~~a~~~~~~~~----------------------~~~~~~~pF~~~~k~~gv~~~---g--~~i~kGa~~~il~~~~~-- 400 (673)
T PRK14010 350 VKLAYKQHIDLP----------------------QEVGEYIPFTAETRMSGVKFT---T--REVYKGAPNSMVKRVKE-- 400 (673)
T ss_pred HHHHHHcCCCch----------------------hhhcceeccccccceeEEEEC---C--EEEEECCHHHHHHHhhh--
Confidence 999987665311 001134799999999998754 2 25669999999999974
Q ss_pred ccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccC
Q 003468 551 LLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLR 630 (817)
Q Consensus 551 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 630 (817)
+|...+. .+.+..++++++|+|+++++. |++++|+++++
T Consensus 401 --~g~~~~~------~~~~~~~~~a~~G~~~l~v~~---------------------------------~~~~lG~i~l~ 439 (673)
T PRK14010 401 --AGGHIPV------DLDALVKGVSKKGGTPLVVLE---------------------------------DNEILGVIYLK 439 (673)
T ss_pred --cCCCCch------HHHHHHHHHHhCCCeEEEEEE---------------------------------CCEEEEEEEee
Confidence 2221111 245566788999999988752 45799999999
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
||+|||++++|++|+++||+++|+|||++.||.++|+++|+.. +|+|++
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------------------v~A~~~ 488 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-------------------------------FVAECK 488 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------EEcCCC
Confidence 9999999999999999999999999999999999999999942 789999
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHH
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKA 790 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 790 (817)
|+||.++|+.+|++|+.|+|+|||.||+|+|++|||||||| +|+++||++||+|+++||++.|++++++||++|.|+++
T Consensus 489 PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~ 567 (673)
T PRK14010 489 PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGS 567 (673)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHhhhccccc
Q 003468 791 FIRYGFCHLENHCLSLELNLDKAIF 815 (817)
Q Consensus 791 ~i~~~~~~n~~~~~~~~~~~~~~~f 815 (817)
++.|.++.|++..+..+...|...|
T Consensus 568 ~~~f~~~~~~~~~~~i~~a~~~~~~ 592 (673)
T PRK14010 568 LTTFSIANDIAKYFAILPAMFMAAM 592 (673)
T ss_pred HHheeeeccHHHHHHHHHHHHHHhc
Confidence 9999999999999888877766543
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-91 Score=764.24 Aligned_cols=687 Identities=22% Similarity=0.322 Sum_probs=518.8
Q ss_pred CCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHH
Q 003468 43 KIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLI 122 (817)
Q Consensus 43 ~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 122 (817)
.+||+.+++..|+..||+|.+..+. +++++++.++..+|++++..+ ++++|+.+. +++++..|+++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~f----Sv~lW~~d~---------Y~~YA~cI~ii 223 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAF----SVALWLADS---------YYYYAFCIVII 223 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhH----Hhhhhhccc---------chhhhhHHHHH
Confidence 5799999999999999999998754 699999999999998865544 455554433 45567778888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecC-CCcccccEEEEeecCCeEEEee
Q 003468 123 LIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKV-GDKVPADMRLLRLTSSTVRVEQ 201 (817)
Q Consensus 123 ~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~-G~~iPaD~~ll~~~~g~~~Vde 201 (817)
.+.+.++..|+.++..+.++++-+. +..++|+|+|.+ ++|.++|||||||+.+.+ |-..|||++|+ +|+|.|||
T Consensus 224 sv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g~~-~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNE 298 (1140)
T KOG0208|consen 224 SVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDGFW-ETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECCEE-EEEeccccccccEEEECCCCeEeecceEEE---eCcEEeec
Confidence 8888999999999888888887654 357999999998 999999999999999988 99999999999 69999999
Q ss_pred cCCCCCccccccccccCCCC-------CCCCCccceeeeCcEEee------CeEEEEEeeeCCccchhhhHhHhhhhccC
Q 003468 202 GSLTGESEAVSKTVKTVPEN-------SDIQGKKCMVFAGTTVVN------GTCTCLVTNTGMNTEIGKVHSQIHEASQN 268 (817)
Q Consensus 202 s~LTGEs~pv~K~~~~~~~~-------~~~~~~~~~l~~Gt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 268 (817)
|+|||||.||.|.+.+...+ +.....+|++|+||.+++ +.+.++|++||.+|..|++.+++..+ +
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP--k 376 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP--K 376 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC--C
Confidence 99999999999998752211 223467899999999986 67999999999999999999999887 2
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHH
Q 003468 269 EEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVIT 348 (817)
Q Consensus 269 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~ 348 (817)
+.+++ +-+-+..++.++.+++++.+++....+.. .|.+ .-..+.+++.++.+.+|++||++++
T Consensus 377 --P~~fk--fyrds~~fi~~l~~ia~~gfiy~~i~l~~----~g~~---------~~~iiirsLDliTi~VPPALPAalt 439 (1140)
T KOG0208|consen 377 --PVNFK--FYRDSFKFILFLVIIALIGFIYTAIVLNL----LGVP---------LKTIIIRSLDLITIVVPPALPAALT 439 (1140)
T ss_pred --CcccH--HHHHHHHHHHHHHHHHHHHHHHHhHhHHH----cCCC---------HHHHhhhhhcEEEEecCCCchhhhh
Confidence 23333 33333334444445555554443332211 2221 1345778999999999999999999
Q ss_pred HHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCc---CCccceeeecCCccCCCCCcc
Q 003468 349 TCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSR---AGTLRSFNVQGTTYNPSDGRI 425 (817)
Q Consensus 349 ~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 425 (817)
++..++.+||.|+||+|.+++.+...|++|++|||||||||++.+.+..+.....+ .+.+....... .+..
T Consensus 440 vG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~------~~~~ 513 (1140)
T KOG0208|consen 440 VGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDS------LQLF 513 (1140)
T ss_pred HHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhh------ccce
Confidence 99999999999999999999999999999999999999999999999999875432 11111100000 0000
Q ss_pred cCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCC---------CCCC-----CCc
Q 003468 426 EGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVN---------HGSS-----SSP 491 (817)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~---------~~~~-----~~~ 491 (817)
..............+..+++.||+... -++ ...|+|.|..+.+.. |+..... .+.. .++
T Consensus 514 ~~l~~~~~~~~~~~~~~a~atCHSL~~--v~g--~l~GDPLdlkmfe~t---~w~~ee~~~~~~~~~~~~~~~p~v~~p~ 586 (1140)
T KOG0208|consen 514 YKLSLRSSSLPMGNLVAAMATCHSLTL--VDG--TLVGDPLDLKMFEST---GWVYEEADIEDEATREFNTLIPTVVRPP 586 (1140)
T ss_pred eeccccccCCchHHHHHHHhhhceeEE--eCC--eeccCceeeeeeecc---ceEEEeccccchhhhhhCCccCCEeCCC
Confidence 000000111123456777888995432 222 235778776554432 2211000 0000 000
Q ss_pred hhhhhh-hhhccccccceEeeccCCCCceEEEEEeec-CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHH
Q 003468 492 EDVLRC-CQLWNTLEQRFATLEFDRDRKSMGVLVNSS-SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQ 569 (817)
Q Consensus 492 ~~~~~~-~~~~~~~~~~l~~~~F~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (817)
...... .+...+.+.+++.+||+|..+|||||++.. +.+..+|+|||||.|.+.|+....+ ..+.+
T Consensus 587 ~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP------------~dy~e 654 (1140)
T KOG0208|consen 587 ENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVP------------ADYQE 654 (1140)
T ss_pred cccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCC------------ccHHH
Confidence 000000 001112467899999999999999999975 4567899999999999999876554 35788
Q ss_pred HHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCC
Q 003468 570 SLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGI 649 (817)
Q Consensus 570 ~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi 649 (817)
.++.|+.+|+|++|+|+|++... .+ .......++.+|+||+|+|++.|++++|++++.+|++|.++.|
T Consensus 655 vl~~Yt~~GfRVIAlA~K~L~~~--~~----------~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnI 722 (1140)
T KOG0208|consen 655 VLKEYTHQGFRVIALASKELETS--TL----------QKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANI 722 (1140)
T ss_pred HHHHHHhCCeEEEEEecCccCcc--hH----------HHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcc
Confidence 99999999999999999998652 00 0123356788999999999999999999999999999999999
Q ss_pred eEEEECCCCHhhHHHHHHHhCCCCCCccc---------------------------------------------------
Q 003468 650 RVMVITGDNKNTAEAICREIGVFGAHEDI--------------------------------------------------- 678 (817)
Q Consensus 650 ~v~~~TGd~~~~a~~ia~~~gi~~~~~~~--------------------------------------------------- 678 (817)
|++|+||||..||..+||+||+..+...+
T Consensus 723 RtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 802 (1140)
T KOG0208|consen 723 RTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKD 802 (1140)
T ss_pred eEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccce
Confidence 99999999999999999999996432111
Q ss_pred cccccChhHHHHHHH----Hh-HhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCC
Q 003468 679 SSQSITGKEFMDIHN----QK-NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIA 753 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~----~~-~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~ 753 (817)
+...++|+.+..+.+ .. ..+. +..|||||+|.||.++|+.+|+.|..|+|+|||+||+.|||+|||||+++.
T Consensus 803 yhlA~sG~~f~~i~~~~~~l~~~Il~--~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe- 879 (1140)
T KOG0208|consen 803 YHLAMSGKTFQVILEHFPELVPKILL--KGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE- 879 (1140)
T ss_pred eEEEecCchhHHHHhhcHHHHHHHHh--cCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh-
Confidence 112355555555521 11 2222 677999999999999999999999999999999999999999999999873
Q ss_pred ccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhh
Q 003468 754 GTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELN 809 (817)
Q Consensus 754 ~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 809 (817)
..|.-||.++..-.+.+.+.+.|++||+.+..--..++|+-.+.+...+++++.
T Consensus 880 --aEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L 933 (1140)
T KOG0208|consen 880 --AEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL 933 (1140)
T ss_pred --hhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee
Confidence 356778999999889999999999999999999999999988877777665543
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-88 Score=765.67 Aligned_cols=547 Identities=24% Similarity=0.338 Sum_probs=451.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhccCCC-CCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhccc-ceEE
Q 003468 77 EQFNDTLVRILLVAAVVSFVLAWYDGEE-GGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE-QATV 154 (817)
Q Consensus 77 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 154 (817)
.||++|+.++++++++++++++++.... +.......|+..+++++.+++..+++.++|+|+++.++.|+++.++ .++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5788999999999999999988653211 1112234667777788888888899999999999999999998886 6999
Q ss_pred ecCCc-cceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeee
Q 003468 155 TRDGK-KIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFA 233 (817)
Q Consensus 155 ~r~g~-~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~ 233 (817)
+|+|+ + ++|++++|+|||+|.|++||+|||||+|++ |.+.||||+|||||.||.|.++.. .+.+|+
T Consensus 109 ir~g~~~-~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~~---------~~~V~a 175 (679)
T PRK01122 109 LREPGAA-EEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGGD---------FSSVTG 175 (679)
T ss_pred EECCCEE-EEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCCc---------cCeEEe
Confidence 99988 6 899999999999999999999999999996 568999999999999999998632 234999
Q ss_pred CcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 003468 234 GTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGW 313 (817)
Q Consensus 234 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 313 (817)
||.+.+|++.++|+++|.+|.+|++.++++++ +.+++|++..++.+...++.+++++++.++.+. ++ .++
T Consensus 176 GT~v~~G~~~i~Vta~g~~S~lgki~~lve~a--~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~--~~------~g~ 245 (679)
T PRK01122 176 GTRVLSDWIVIRITANPGESFLDRMIALVEGA--KRQKTPNEIALTILLAGLTIIFLLVVATLPPFA--AY------SGG 245 (679)
T ss_pred ceEEEeeeEEEEEEEecccCHHHHHHHHHHhc--cccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHH--HH------hCc
Confidence 99999999999999999999999999999988 677899998888776665544333333322221 11 111
Q ss_pred CcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCcc
Q 003468 314 PRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQM 393 (817)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m 393 (817)
...+.+++++++++|||+|+.+.+.....++.||+|+|+++|++.++|+||++|+||||||||||+|+|
T Consensus 246 -----------~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~ 314 (679)
T PRK01122 246 -----------ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNR 314 (679)
T ss_pred -----------hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcE
Confidence 124677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHH
Q 003468 394 AVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVM 473 (817)
Q Consensus 394 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~ 473 (817)
.+.+++..+. .+ ...++.++++|+.. ..||...|++.+
T Consensus 315 ~v~~~~~~~~-----------------------------~~--~~~ll~~a~~~s~~-----------s~hP~~~AIv~~ 352 (679)
T PRK01122 315 QASEFLPVPG-----------------------------VT--EEELADAAQLSSLA-----------DETPEGRSIVVL 352 (679)
T ss_pred EEEEEEeCCC-----------------------------CC--HHHHHHHHHHhcCC-----------CCCchHHHHHHH
Confidence 9998864321 00 12345555566543 246888999999
Q ss_pred HHH-cCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhcccccccc
Q 003468 474 VEK-MGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLL 552 (817)
Q Consensus 474 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~ 552 (817)
++. .+.... +..+.....+||++.+|+|++.++ | ..++||++|.+++.|..
T Consensus 353 a~~~~~~~~~-------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~---- 404 (679)
T PRK01122 353 AKQRFNLRER-------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVES---- 404 (679)
T ss_pred HHhhcCCCch-------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----
Confidence 876 233110 001234567899999988887653 2 57999999999999963
Q ss_pred CCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCC
Q 003468 553 DGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDP 632 (817)
Q Consensus 553 ~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 632 (817)
+|... .+++.+.+++++++|+|++++|+ |++++|+++++|+
T Consensus 405 ~g~~~------~~~~~~~~~~~a~~G~~~l~va~---------------------------------~~~~lG~i~l~D~ 445 (679)
T PRK01122 405 NGGHF------PAELDAAVDEVARKGGTPLVVAE---------------------------------DNRVLGVIYLKDI 445 (679)
T ss_pred cCCcC------hHHHHHHHHHHHhCCCcEEEEEE---------------------------------CCeEEEEEEEecc
Confidence 22211 14566778889999999999984 3569999999999
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+|||++++|++|+++||+++|+|||++.+|.++|+++|+.. +++|++|+
T Consensus 446 ~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~-------------------------------v~A~~~Pe 494 (679)
T PRK01122 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FLAEATPE 494 (679)
T ss_pred CchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-------------------------------EEccCCHH
Confidence 99999999999999999999999999999999999999942 78999999
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFI 792 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i 792 (817)
+|.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+++||++||+|++|||++.|++++++||++.-.--.+-
T Consensus 495 dK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~ 573 (679)
T PRK01122 495 DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALT 573 (679)
T ss_pred HHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhh
Confidence 999999999999999999999999999999999999999 8999999999999999999999999999999885544455
Q ss_pred HHHhhh
Q 003468 793 RYGFCH 798 (817)
Q Consensus 793 ~~~~~~ 798 (817)
.|.+.-
T Consensus 574 ~f~~~n 579 (679)
T PRK01122 574 TFSIAN 579 (679)
T ss_pred hhhHHH
Confidence 676653
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-85 Score=737.05 Aligned_cols=554 Identities=23% Similarity=0.356 Sum_probs=450.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhccCCCCCc-c--hhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhccc-ce
Q 003468 77 EQFNDTLVRILLVAAVVSFVLAWYDGEEGGE-M--EITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE-QA 152 (817)
Q Consensus 77 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~-~~ 152 (817)
.||++|+.+++++++++++++++++...+.. . .|..+...+++++.+++..+++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 5789999999999999999987653211111 1 122233345566667788889999999999999999998877 48
Q ss_pred EEec-CCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCcccee
Q 003468 153 TVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMV 231 (817)
Q Consensus 153 ~V~r-~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l 231 (817)
+|+| +|++ ++|++++|+|||+|.|++||+|||||++++ |.+.||||+|||||.||.|++++. ...+
T Consensus 108 ~vlr~dg~~-~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~---------~~~V 174 (675)
T TIGR01497 108 KLLRDDGAI-DKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD---------FASV 174 (675)
T ss_pred EEEeeCCEE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC---------ccee
Confidence 8875 8887 899999999999999999999999999996 678999999999999999998732 1239
Q ss_pred eeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 003468 232 FAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVD 311 (817)
Q Consensus 232 ~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 311 (817)
|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..++.+...+.++.+++++.+|.+.. + .
T Consensus 175 ~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a--~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~-----~---~ 244 (675)
T TIGR01497 175 TGGTRILSDWLVVECTANPGETFLDRMIALVEGA--QRRKTPNEIALTILLIALTLVFLLVTATLWPFAA-----Y---G 244 (675)
T ss_pred ecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhc--ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h---c
Confidence 9999999999999999999999999999999988 6678999988887765554433333322222110 0 1
Q ss_pred CCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccC
Q 003468 312 GWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTN 391 (817)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~ 391 (817)
+. ...+..++++++++|||+|+...+.....++.||+++|+++|++.++|+||++|+||||||||||+|
T Consensus 245 ~~-----------~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g 313 (675)
T TIGR01497 245 GN-----------AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLG 313 (675)
T ss_pred Ch-----------hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCC
Confidence 11 1245667889999999988887777777899999999999999999999999999999999999999
Q ss_pred ccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHH
Q 003468 392 QMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALK 471 (817)
Q Consensus 392 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~ 471 (817)
+|++.+++..+. .....++..+++|+.. ..||.+.|++
T Consensus 314 ~~~v~~~~~~~~-------------------------------~~~~~ll~~aa~~~~~-----------s~hP~a~Aiv 351 (675)
T TIGR01497 314 NRLASEFIPAQG-------------------------------VDEKTLADAAQLASLA-----------DDTPEGKSIV 351 (675)
T ss_pred CeEEEEEEecCC-------------------------------CcHHHHHHHHHHhcCC-----------CCCcHHHHHH
Confidence 999999875320 0112344555556533 2579999999
Q ss_pred HHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccc
Q 003468 472 VMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQL 551 (817)
Q Consensus 472 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~ 551 (817)
.++++.|..... ..+......||++.++++++.+. + ...++||++|.+++.|..
T Consensus 352 ~~a~~~~~~~~~-------------------~~~~~~~~~pf~~~~~~sg~~~~--~--g~~~~kGa~e~i~~~~~~--- 405 (675)
T TIGR01497 352 ILAKQLGIREDD-------------------VQSLHATFVEFTAQTRMSGINLD--N--GRMIRKGAVDAIKRHVEA--- 405 (675)
T ss_pred HHHHHcCCCccc-------------------cccccceEEEEcCCCcEEEEEEe--C--CeEEEECCHHHHHHHHHh---
Confidence 999876653210 01123467899999887776543 2 357999999999988752
Q ss_pred cCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCC
Q 003468 552 LDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRD 631 (817)
Q Consensus 552 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d 631 (817)
+|... ...+.+.+++++++|.|++++|+. .+++|+++++|
T Consensus 406 -~g~~~------~~~~~~~~~~~a~~G~r~l~va~~---------------------------------~~~lG~i~l~D 445 (675)
T TIGR01497 406 -NGGHI------PTDLDQAVDQVARQGGTPLVVCED---------------------------------NRIYGVIYLKD 445 (675)
T ss_pred -cCCCC------cHHHHHHHHHHHhCCCeEEEEEEC---------------------------------CEEEEEEEecc
Confidence 22211 134667788899999999999952 36999999999
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++||+++++|++|+++|++++|+|||+..+|.++|+++|+.. +++|++|
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------------------v~a~~~P 494 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------------------FIAEATP 494 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------EEcCCCH
Confidence 999999999999999999999999999999999999999942 7899999
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAF 791 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 791 (817)
++|.++++.+|+.|+.|+|+|||.||+|||++|||||||| +|++.++++||++++++|++.|++++++||+++-+...+
T Consensus 495 edK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~ 573 (675)
T TIGR01497 495 EDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGAL 573 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHH
Q 003468 792 IRYGFCHLENHCL 804 (817)
Q Consensus 792 i~~~~~~n~~~~~ 804 (817)
..|.++-+++--+
T Consensus 574 ~t~~~~~~~~~~~ 586 (675)
T TIGR01497 574 TTFSIANDVAKYF 586 (675)
T ss_pred heeeecccHHHHH
Confidence 9999877765433
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-84 Score=678.23 Aligned_cols=653 Identities=29% Similarity=0.403 Sum_probs=522.3
Q ss_pred CCCccccccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHH
Q 003468 16 KESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSF 95 (817)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ 95 (817)
.++.+++..+--..+++++.+.|.... .|||.+|+++|+++||+|++..+ +.+.+..|+--|.+|+.|+.-.+|++..
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~-~GLt~~E~~eRlk~fG~NkleEk-ken~~lKFl~Fm~~PlswVMEaAAimA~ 85 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTR-EGLTSDEVEERLKIFGPNKLEEK-KESKFLKFLGFMWNPLSWVMEAAAIMAI 85 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCC-CCCchHHHHHHHHhhCchhhhhh-hhhHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 355666666777789999999999875 49999999999999999999964 4566667778888999999999999877
Q ss_pred HHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEE
Q 003468 96 VLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIV 175 (817)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII 175 (817)
.+.- + .....+|.....|...+++|+.+++.+|+++.++.+.|++...+++.|+|||+| .++.+++|||||||
T Consensus 86 ~Lan--g----~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw-~E~eAs~lVPGDIl 158 (942)
T KOG0205|consen 86 GLAN--G----GGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKW-SEQEASILVPGDIL 158 (942)
T ss_pred HHhc--C----CCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCee-eeeeccccccCcee
Confidence 6642 1 112247888888888899999999999999999999999988899999999999 99999999999999
Q ss_pred EecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccch
Q 003468 176 ELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEI 255 (817)
Q Consensus 176 ~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~ 255 (817)
.++.|++||||++|++ ...+.||+|.|||||.||.|.++ +.+|+||.|.+|++.++|++||.+|+.
T Consensus 159 sik~GdIiPaDaRLl~--gD~LkiDQSAlTGESLpvtKh~g------------d~vfSgSTcKqGE~eaVViATg~~TF~ 224 (942)
T KOG0205|consen 159 SIKLGDIIPADARLLE--GDPLKIDQSALTGESLPVTKHPG------------DEVFSGSTCKQGEIEAVVIATGVHTFF 224 (942)
T ss_pred eeccCCEecCccceec--CCccccchhhhcCCccccccCCC------------CceecccccccceEEEEEEEeccceee
Confidence 9999999999999998 45899999999999999999997 459999999999999999999999999
Q ss_pred hhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHH
Q 003468 256 GKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALA 335 (817)
Q Consensus 256 g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll 335 (817)
|+-+.++... .....+++.++.+.++++..+.+..++.+++.+... ...+ .........++
T Consensus 225 GkAA~LVdst---~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q-~R~~---------------r~~i~nLlvll 285 (942)
T KOG0205|consen 225 GKAAHLVDST---NQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQ-HRLY---------------RDGIDNLLVLL 285 (942)
T ss_pred hhhHHhhcCC---CCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhh-hhhh---------------hhhhhheheee
Confidence 9999988774 456789999999888776655444433333322111 0000 11111223344
Q ss_pred hhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEE--EEEeCCcCCccceeee
Q 003468 336 VAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTK--LVAVGSRAGTLRSFNV 413 (817)
Q Consensus 336 v~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~--~~~~~~~~~~~~~~~~ 413 (817)
+..+|.++|..++..+++++.||+++|.++++++++|.|+.+|++|+|||||||.|+++|.+ +... +
T Consensus 286 IGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~-----------v 354 (942)
T KOG0205|consen 286 IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF-----------V 354 (942)
T ss_pred ecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee-----------e
Confidence 55599999999999999999999999999999999999999999999999999999999977 2111 1
Q ss_pred cCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchh
Q 003468 414 QGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPED 493 (817)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~ 493 (817)
.+ . ++....+.. |-.+..+ -.+..|.|++.....
T Consensus 355 ~g--v---------------~~D~~~L~A----~rAsr~e--------n~DAID~A~v~~L~d----------------- 388 (942)
T KOG0205|consen 355 KG--V---------------DKDDVLLTA----ARASRKE--------NQDAIDAAIVGMLAD----------------- 388 (942)
T ss_pred cC--C---------------ChHHHHHHH----HHHhhhc--------ChhhHHHHHHHhhcC-----------------
Confidence 11 1 111111111 1112222 135778888765432
Q ss_pred hhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHH
Q 003468 494 VLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQE 573 (817)
Q Consensus 494 ~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (817)
+......++.++.+||++..||.+..+.+++|+.....|||||.|++.|+. +++.++.+...+++
T Consensus 389 ----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~ 453 (942)
T KOG0205|consen 389 ----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDK 453 (942)
T ss_pred ----HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHH
Confidence 112345677889999999999999999999999999999999999999973 33456778889999
Q ss_pred HHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEE
Q 003468 574 MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMV 653 (817)
Q Consensus 574 ~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~ 653 (817)
|+++|+|.+++|++..++...... ..-..|+|+.-+-||+|.+..++|++....|+.|.|
T Consensus 454 ~AeRGlRSLgVArq~v~e~~~~~~--------------------g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkm 513 (942)
T KOG0205|consen 454 FAERGLRSLAVARQEVPEKTKESP--------------------GGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 513 (942)
T ss_pred HHHhcchhhhhhhhccccccccCC--------------------CCCcccccccccCCCCccchHHHHHHHHhccceeee
Confidence 999999999999987765321111 234679999999999999999999999999999999
Q ss_pred ECCCCHhhHHHHHHHhCCCCCCc---ccc----ccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCC
Q 003468 654 ITGDNKNTAEAICREIGVFGAHE---DIS----SQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGE 726 (817)
Q Consensus 654 ~TGd~~~~a~~ia~~~gi~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~ 726 (817)
+|||...-++..++++|+-.+-. .+. ...+.+.+.+++-+ +..-|+.+.|++|.++|+.||++++
T Consensus 514 itgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie--------~adgfAgVfpehKy~iV~~Lq~r~h 585 (942)
T KOG0205|consen 514 ITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIE--------KADGFAGVFPEHKYEIVKILQERKH 585 (942)
T ss_pred ecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhh--------hccCccccCHHHHHHHHHHHhhcCc
Confidence 99999999999999999843210 000 11222222222211 2335778899999999999999999
Q ss_pred EEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHH
Q 003468 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSL 806 (817)
Q Consensus 727 ~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 806 (817)
.++|+|||.||+|+|+.||+|||+. .+++.|+.++|+|++.+.++-|..++..+|.+|+|++.+..|.++..+-.++.+
T Consensus 586 i~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gf 664 (942)
T KOG0205|consen 586 IVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 664 (942)
T ss_pred eecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHH
Confidence 9999999999999999999999999 899999999999999999999999999999999999999999998877766555
Q ss_pred Hhhhc
Q 003468 807 ELNLD 811 (817)
Q Consensus 807 ~~~~~ 811 (817)
++..+
T Consensus 665 ml~al 669 (942)
T KOG0205|consen 665 MLIAL 669 (942)
T ss_pred HHHHH
Confidence 44443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-80 Score=695.18 Aligned_cols=511 Identities=30% Similarity=0.438 Sum_probs=430.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEec-CCccceeeecCCccCCcEEEecCCCcccccEEEE
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLL 190 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll 190 (817)
+|.++..+++++.++.+++.+...|++++++.|.++.|+++++++ ||++ ++||.++|++||+|.|+|||+||+||+|+
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~-~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEE-EEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcE-EEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 346677888888899999999999999999999999999997776 5654 89999999999999999999999999999
Q ss_pred eecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCC
Q 003468 191 RLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEE 270 (817)
Q Consensus 191 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 270 (817)
+ |...||||+|||||.||.|.++ +.||+||.+.+|....+|+++|.+|.+++|.++++++ +..
T Consensus 252 ~---G~s~vDeS~iTGEs~PV~k~~G------------d~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~A--q~~ 314 (713)
T COG2217 252 S---GSSSVDESMLTGESLPVEKKPG------------DEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEA--QSS 314 (713)
T ss_pred e---CcEEeecchhhCCCCCEecCCC------------CEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHH--hhC
Confidence 5 7779999999999999999997 4699999999999999999999999999999999999 888
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHH
Q 003468 271 DTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTC 350 (817)
Q Consensus 271 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~ 350 (817)
++|.|+..|+++.++++.+++++++.+++|+++.. .+| ...+..++++++++|||+|.+++|++
T Consensus 315 Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~-----~~~-----------~~a~~~a~avLVIaCPCALgLAtP~a 378 (713)
T COG2217 315 KAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG-----GDW-----------ETALYRALAVLVIACPCALGLATPTA 378 (713)
T ss_pred CchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-----CcH-----------HHHHHHHHhheeeeCccHHHhHHHHH
Confidence 99999999999999999888888888876654321 112 34678999999999999999999999
Q ss_pred HHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCC
Q 003468 351 LALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPV 430 (817)
Q Consensus 351 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (817)
+..++.+.+++|+++|+..++|.++++|+++||||||||+|+|.|.++...+.
T Consensus 379 i~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--------------------------- 431 (713)
T COG2217 379 ILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--------------------------- 431 (713)
T ss_pred HHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC---------------------------
Confidence 99999999999999999999999999999999999999999999999886431
Q ss_pred CCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEe
Q 003468 431 GRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFAT 510 (817)
Q Consensus 431 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 510 (817)
.+..+..++. ++-. .+.||...|+++.++..|..... ....
T Consensus 432 --~e~~~L~laA--alE~------------~S~HPiA~AIv~~a~~~~~~~~~-----------------------~~~~ 472 (713)
T COG2217 432 --DEDELLALAA--ALEQ------------HSEHPLAKAIVKAAAERGLPDVE-----------------------DFEE 472 (713)
T ss_pred --CHHHHHHHHH--HHHh------------cCCChHHHHHHHHHHhcCCCCcc-----------------------ceee
Confidence 0112222222 2211 24689999999998876632110 0111
Q ss_pred eccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccc
Q 003468 511 LEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDL 590 (817)
Q Consensus 511 ~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~ 590 (817)
+| .+.+...+ +| ..+.-|++..+.+.-. ..+. ..+..+.+..+|..++.++.
T Consensus 473 i~----G~Gv~~~v---~g--~~v~vG~~~~~~~~~~----------~~~~-----~~~~~~~~~~~G~t~v~va~---- 524 (713)
T COG2217 473 IP----GRGVEAEV---DG--ERVLVGNARLLGEEGI----------DLPL-----LSERIEALESEGKTVVFVAV---- 524 (713)
T ss_pred ec----cCcEEEEE---CC--EEEEEcCHHHHhhcCC----------Cccc-----hhhhHHHHHhcCCeEEEEEE----
Confidence 11 22222222 12 5566788877654211 0110 23445667778877666663
Q ss_pred ccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC
Q 003468 591 REFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
|..++|+++++|++|++++++|++|++.|++++|+|||+..+|.++|+++|
T Consensus 525 -----------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lG 575 (713)
T COG2217 525 -----------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG 575 (713)
T ss_pred -----------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 346999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 671 VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 671 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
|.. +++.+.|++|.++|+.+|.+|+.|+|+|||.||+|+|.+|||||||
T Consensus 576 Id~-------------------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm 624 (713)
T COG2217 576 IDE-------------------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM 624 (713)
T ss_pred hHh-------------------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee
Confidence 953 6788999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 751 g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
| +|+|+|+++||+++++|++..++.+++.+|+++++||+++.|.|.+|...+...+++++
T Consensus 625 G-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l 684 (713)
T COG2217 625 G-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLL 684 (713)
T ss_pred c-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9 79999999999999999999999999999999999999999999999988877776543
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-82 Score=731.27 Aligned_cols=730 Identities=22% Similarity=0.222 Sum_probs=555.6
Q ss_pred HHhhcCCCccCCCCCCC---HHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHH
Q 003468 54 RREIYGYNELEKHEGTS---IFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVG 130 (817)
Q Consensus 54 r~~~~G~N~~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~ 130 (817)
+...|-.|.+...|++. +++.+++||.++.+++|++.++++++. +. ++..|...+++++++.++++.+
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~--------~~~~~~~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS--------PFNPYTTLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc--------ccCccceeeceeeeehHHHHHH
Confidence 55689999999888864 799999999999999999999999987 32 2335667778888888899999
Q ss_pred HHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeec--CCeEEEeecCCCCCc
Q 003468 131 IWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLT--SSTVRVEQGSLTGES 208 (817)
Q Consensus 131 ~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~--~g~~~Vdes~LTGEs 208 (817)
.++++|+.+....++ ..++.|.|++...++..|++|+|||+|.+..++.+|||.+|+.++ +|.|+|++++|+||+
T Consensus 99 ~~eD~rR~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEt 175 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGET 175 (1151)
T ss_pred HHhhhhhhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCcc
Confidence 999999988777665 457889886442389999999999999999999999999999866 478999999999999
Q ss_pred cccccccccCC--------------------CC--------------CC-CCCccceeeeCcEEeeC-eEEEEEeeeCCc
Q 003468 209 EAVSKTVKTVP--------------------EN--------------SD-IQGKKCMVFAGTTVVNG-TCTCLVTNTGMN 252 (817)
Q Consensus 209 ~pv~K~~~~~~--------------------~~--------------~~-~~~~~~~l~~Gt~v~~g-~~~~~V~~tG~~ 252 (817)
+.+.|+..+.. |+ .. +.++++++++|+.+.+. ++.+.|+.||.+
T Consensus 176 nLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~d 255 (1151)
T KOG0206|consen 176 NLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHD 255 (1151)
T ss_pred ccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCc
Confidence 99888753211 00 01 45678899999999996 789999999999
Q ss_pred cchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-C-CCCcccccchhhHHHHHHH
Q 003468 253 TEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYV-D-GWPRNFKFSFEKCTYYFEI 330 (817)
Q Consensus 253 T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 330 (817)
|++++-... ...+++++++.++.....+..+.++++++..+....+....... . .|..............|..
T Consensus 256 tK~~~n~~~-----~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t 330 (1151)
T KOG0206|consen 256 TKLMQNSGK-----PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLT 330 (1151)
T ss_pred chHHHhcCC-----CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHH
Confidence 999654322 25677888999998877776666666666555443332210000 0 1111101012233556777
Q ss_pred HHHHHhhhccCchHHHHHHHHHhHHHHHh----------hccccccccccccccCCeeEEecCCCcccccCccEEEEEEE
Q 003468 331 AVALAVAAIPEGLPAVITTCLALGTRKMA----------QKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVA 400 (817)
Q Consensus 331 ~i~llv~~iP~~L~~~~~~~~~~~~~~l~----------k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~ 400 (817)
++.++...+|.+|++++.+....++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+
T Consensus 331 ~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi 410 (1151)
T KOG0206|consen 331 FIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSI 410 (1151)
T ss_pred HHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccc
Confidence 78888999999999999998888775442 34688999999999999999999999999999999999999
Q ss_pred eCCcCCccceeeecCC----------------ccCCCCCcccCCC-CCCCCHHHHHHHHHHhHhcCCeeee-cC--CeeE
Q 003468 401 VGSRAGTLRSFNVQGT----------------TYNPSDGRIEGWP-VGRMDANLQTIAKISAVCNDAGVEQ-SG--NHYV 460 (817)
Q Consensus 401 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-~~--~~~~ 460 (817)
.|..|+...+-...+. .+.. .......+ ..........+..++++||+..++. .+ ...+
T Consensus 411 ~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y 489 (1151)
T KOG0206|consen 411 NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFED-SRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSY 489 (1151)
T ss_pred cCcccccCCChhhcccCccccccccccccccceecc-chhhccccccccCcchHHHHhhHHhccceeeeccCCCccceee
Confidence 9988764321110000 0000 00111111 1123455678889999999988877 22 3577
Q ss_pred eCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcch
Q 003468 461 ASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540 (817)
Q Consensus 461 ~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e 540 (817)
.+.+|+|.|++..|+..|+....+......-. .......+++++.++|+|.|||||||||.++|+..+|||||+.
T Consensus 490 ~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~-----~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADs 564 (1151)
T KOG0206|consen 490 EAESPDEAALVEAARELGFVFLGRTPDSVTIR-----ELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADS 564 (1151)
T ss_pred ecCCCcHHHHHHHHHhcCceeeeccCceEEEe-----ccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcch
Confidence 88999999999999999998754432211111 1113457899999999999999999999999999999999999
Q ss_pred HHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchh-----hccCCCCccc
Q 003468 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAH-----QLLLNPTNYS 615 (817)
Q Consensus 541 ~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 615 (817)
+|.+++.. -....++...+++++|+.+|+|++++|||.++++.++.+......+. +.....+.++
T Consensus 565 vI~erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae 634 (1151)
T KOG0206|consen 565 VIFERLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAE 634 (1151)
T ss_pred hhHhhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHH
Confidence 99999874 12345667788999999999999999999998864433333222221 2222234567
Q ss_pred cccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc-----------------
Q 003468 616 SIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI----------------- 678 (817)
Q Consensus 616 ~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~----------------- 678 (817)
.+|+||+++|.+++||+++++++++|+.|++|||++|++|||..+||.+|+..|++...+..+
T Consensus 635 ~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~ 714 (1151)
T KOG0206|consen 635 EIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDAT 714 (1151)
T ss_pred HHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhH
Confidence 899999999999999999999999999999999999999999999999999999997643221
Q ss_pred --------------------------cccccChhHHHHHH------HHhHhhccCCceEEEecCcccHHHHHHHHhc-CC
Q 003468 679 --------------------------SSQSITGKEFMDIH------NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKE-DG 725 (817)
Q Consensus 679 --------------------------~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~-~~ 725 (817)
...+++|+.+.... ........+..+++||++|-||+.+|+..++ .+
T Consensus 715 ~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~ 794 (1151)
T KOG0206|consen 715 AALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLK 794 (1151)
T ss_pred HHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCC
Confidence 11233343333221 1223344568899999999999999999974 48
Q ss_pred CEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHH
Q 003468 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLS 805 (817)
Q Consensus 726 ~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~ 805 (817)
..+++||||+||++|++.|||||..+...-..|..+||+.+....+-.-.. +.|||+.|.|+.+++.|.|++|+.+.++
T Consensus 795 ~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLL-LVHGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 795 AVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLL-LVHGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred ceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhh-eeecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999996653333468899999998844443333 3599999999999999999999999999
Q ss_pred HHhhhccccccC
Q 003468 806 LELNLDKAIFFF 817 (817)
Q Consensus 806 ~~~~~~~~~f~~ 817 (817)
+++|.|.++||+
T Consensus 874 ~fwy~f~~gfSg 885 (1151)
T KOG0206|consen 874 LFWYQFFNGFSG 885 (1151)
T ss_pred HHHhhhcCCCCC
Confidence 999999999985
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-80 Score=654.52 Aligned_cols=706 Identities=21% Similarity=0.284 Sum_probs=525.3
Q ss_pred HHHhhcCCCccCCCCCC---CHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHH
Q 003468 53 KRREIYGYNELEKHEGT---SIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIV 129 (817)
Q Consensus 53 ~r~~~~G~N~~~~~~~~---~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~ 129 (817)
.++++|-+|.+...|++ .++..+++||+-++++++++.++.+++..+..+ ....+|.....++++.++...+
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig-----~l~ty~~pl~fvl~itl~keav 148 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIG-----YLSTYWGPLGFVLTITLIKEAV 148 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheec-----chhhhhHHHHHHHHHHHHHHHH
Confidence 56778889999877764 478899999999999999999998887665432 1122444444555555555555
Q ss_pred HHHHHhHHHHHHHHHHhhcccceEE-ecCCccceeeecCCccCCcEEEecCCCcccccEEEEeec--CCeEEEeecCCCC
Q 003468 130 GIWQESNAEKALEALKEIQSEQATV-TRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLT--SSTVRVEQGSLTG 206 (817)
Q Consensus 130 ~~~~e~~~~~~~~~l~~~~~~~~~V-~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~--~g~~~Vdes~LTG 206 (817)
+.+++++..+.. +.+..++ -|+|.. ..++++|++||+|.+..+++||||.++|+++ +|.|.|-+-.|+|
T Consensus 149 dd~~r~~rd~~~------Nse~y~~ltr~~~~--~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDG 220 (1051)
T KOG0210|consen 149 DDLKRRRRDREL------NSEKYTKLTRDGTR--REPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDG 220 (1051)
T ss_pred HHHHHHHhhhhh------hhhhheeeccCCcc--cccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCC
Confidence 555555444322 2333444 467754 3499999999999999999999999999977 5789999999999
Q ss_pred CccccccccccCC-----------------------------------CCCCCCCccceeeeCcEEeeCeEEEEEeeeCC
Q 003468 207 ESEAVSKTVKTVP-----------------------------------ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGM 251 (817)
Q Consensus 207 Es~pv~K~~~~~~-----------------------------------~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~ 251 (817)
|++.+.|-|.+.. +..+..+-.|+++++|.+.+|.+.|+|++||.
T Consensus 221 ETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~ 300 (1051)
T KOG0210|consen 221 ETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGR 300 (1051)
T ss_pred cccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecc
Confidence 9998877654211 01123456799999999999999999999999
Q ss_pred ccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHH
Q 003468 252 NTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIA 331 (817)
Q Consensus 252 ~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (817)
+|.. .++......+-.-+...+|.+.+++..+++++++++...-. +. +.| -..+.++
T Consensus 301 dtRs-----vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g--~~-----~~w-----------yi~~~Rf 357 (1051)
T KOG0210|consen 301 DTRS-----VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG--FG-----SDW-----------YIYIIRF 357 (1051)
T ss_pred cHHH-----HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc--CC-----Cch-----------HHHHHHH
Confidence 9975 34544334445557788888888887777766665543311 11 223 2346677
Q ss_pred HHHHhhhccCchHHHHHHHHHhHHHHHhhc----cccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCc
Q 003468 332 VALAVAAIPEGLPAVITTCLALGTRKMAQK----NALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGT 407 (817)
Q Consensus 332 i~llv~~iP~~L~~~~~~~~~~~~~~l~k~----~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~ 407 (817)
+.++...+|.+|.+.+.++...-...+.++ |.++|+...-|+||+|+++.+|||||||+|.|.+++++.+.-.++.
T Consensus 358 llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~ 437 (1051)
T KOG0210|consen 358 LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSA 437 (1051)
T ss_pred HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccH
Confidence 888889999999999999999888888765 6789999999999999999999999999999999999987544432
Q ss_pred cceeeecC---CccCC---CCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecC--CeeEeCCChhHHHHHHHHHHcCC
Q 003468 408 LRSFNVQG---TTYNP---SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSG--NHYVASGMPTEAALKVMVEKMGF 479 (817)
Q Consensus 408 ~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~p~e~al~~~~~~~g~ 479 (817)
...-.++. ..+.+ .+......-.......+..+..++++||+..+..++ ...++..+|+|.||+.+.+..|.
T Consensus 438 e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl 517 (1051)
T KOG0210|consen 438 ETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGL 517 (1051)
T ss_pred hHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecce
Confidence 10000000 00111 111111111234556677888899999998877655 67888899999999999999998
Q ss_pred CCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeec-CCcEEEEEeCcchHHHhccccccccCCceee
Q 003468 480 PEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSS-SGNKKLLVKGAVENLLERSSFVQLLDGSVVE 558 (817)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~ 558 (817)
....++....... ........|+++..|||+|+.|||+++|+++ .++...|.|||+..|...-.
T Consensus 518 ~L~~Rd~~~itL~----~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----------- 582 (1051)
T KOG0210|consen 518 KLAKRDRHAITLR----VPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----------- 582 (1051)
T ss_pred EEeecccceEEEe----cCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc-----------
Confidence 7655432211110 1122345788999999999999999999976 68889999999988765432
Q ss_pred cCHHHHHHHHHHHHHHHHhhhceeeeeeecccccc-cccCC----CCCcchhhccCCCCcc-ccccCCeEEEEEeccCCC
Q 003468 559 LDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREF-ETYDG----DEDHPAHQLLLNPTNY-SSIESRLVFVGMVGLRDP 632 (817)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~-~~~~~----~~~~~~~~~~~~~~~~-~~~e~~l~~lG~~~~~d~ 632 (817)
-+ +++++...+|+++|+|++.+|.|.+.++. +.++. ++-+..++...-.... ..+|.||.++|+.|.||+
T Consensus 583 ~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDk 658 (1051)
T KOG0210|consen 583 YN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDK 658 (1051)
T ss_pred cc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHH
Confidence 12 46777788999999999999999998762 22221 1111111000000111 257899999999999999
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc------------------------cccccChhHH
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI------------------------SSQSITGKEF 688 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------------------~~~~~~~~~~ 688 (817)
++++++.+++.||+|||++||+|||..+||..+|+..++...+..+ ...+++|+.+
T Consensus 659 LQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 659 LQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESL 738 (1051)
T ss_pred HhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchH
Confidence 9999999999999999999999999999999999999997654432 1245666655
Q ss_pred HHH-----HHHhHhhccCCceEEEecCcccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhc
Q 003468 689 MDI-----HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEAS 762 (817)
Q Consensus 689 ~~~-----~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~a 762 (817)
+-. .+..+........++||++|.||+++++.+|+. ++.|+++|||.||+.|+++||+||..-...-..|.-||
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 433 344555667788999999999999999999876 89999999999999999999999975323334578899
Q ss_pred CEEeccCCccHHHHH-HHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhccccccC
Q 003468 763 DMVLADDNFGTIVAA-VGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDKAIFFF 817 (817)
Q Consensus 763 d~vl~~~~~~~i~~~-i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f~~ 817 (817)
|+.+.. |..+.++ +.|||+.|+|..+.-+|.+ .-+++++.+.++|++.|+|
T Consensus 819 DfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfVi--HRGL~Is~~Qavfs~v~yF 870 (1051)
T KOG0210|consen 819 DFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVI--HRGLIISTMQAVFSSVFYF 870 (1051)
T ss_pred cccHHH--HHHHHHHhhccccchHHHHHHHHHHHH--hhhHHHHHHHHHHHHHhhh
Confidence 999987 8888887 5799999999999998887 5688889999999999987
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-77 Score=692.65 Aligned_cols=506 Identities=27% Similarity=0.412 Sum_probs=428.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEe
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLR 191 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~ 191 (817)
.|.++..++++++++.+++.+++.|+++.+++|.++.|++++|+|+|++ ++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~-~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGER-EEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 4667788888899999999999999999999999999999999999998 899999999999999999999999999996
Q ss_pred ecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCC
Q 003468 192 LTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEED 271 (817)
Q Consensus 192 ~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 271 (817)
|.+.||||+|||||.|+.|.++ +.||+||.+.+|.+.++|+++|.+|.+|+|.++++++ +.++
T Consensus 284 ---g~~~vdes~lTGEs~Pv~k~~G------------d~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a--~~~k 346 (741)
T PRK11033 284 ---PFASFDESALTGESIPVERATG------------EKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEA--EERR 346 (741)
T ss_pred ---CcEEeecccccCCCCCEecCCC------------CeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHh--hccC
Confidence 6789999999999999999987 5699999999999999999999999999999999998 7778
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHH
Q 003468 272 TPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCL 351 (817)
Q Consensus 272 ~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~ 351 (817)
+|+++.+++++.+++++++++++++|+++...+. .+| ...+..++++++++|||+|++++|+++
T Consensus 347 ~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~-----~~~-----------~~~i~~a~svlviacPcaL~latP~a~ 410 (741)
T PRK11033 347 APIERFIDRFSRIYTPAIMLVALLVILVPPLLFA-----APW-----------QEWIYRGLTLLLIGCPCALVISTPAAI 410 (741)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CCH-----------HHHHHHHHHHHHHhchhhhhhhhHHHH
Confidence 9999999999999999999999988887633221 112 335678899999999999999999999
Q ss_pred HhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCC
Q 003468 352 ALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVG 431 (817)
Q Consensus 352 ~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (817)
..+..+++|+|+++|+..++|+|+++|+||||||||||+|+|+|.+++..+. +
T Consensus 411 ~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------~------------- 463 (741)
T PRK11033 411 TSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG--------------I------------- 463 (741)
T ss_pred HHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC--------------C-------------
Confidence 9999999999999999999999999999999999999999999999875321 0
Q ss_pred CCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEee
Q 003468 432 RMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATL 511 (817)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 511 (817)
... .++..++.. +. .+.||.+.|++++++..+.. +
T Consensus 464 -~~~---~~l~~aa~~-----e~------~s~hPia~Ai~~~a~~~~~~------------------------------~ 498 (741)
T PRK11033 464 -SES---ELLALAAAV-----EQ------GSTHPLAQAIVREAQVRGLA------------------------------I 498 (741)
T ss_pred -CHH---HHHHHHHHH-----hc------CCCCHHHHHHHHHHHhcCCC------------------------------C
Confidence 011 122222111 11 14689999999998765542 3
Q ss_pred ccCCCCceEE-EEEee-cCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecc
Q 003468 512 EFDRDRKSMG-VLVNS-SSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDD 589 (817)
Q Consensus 512 ~F~s~~k~ms-vvv~~-~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~ 589 (817)
||.++++.+. .-++. .+|.. +..|+++.+.+ ++ +.+.+.++.+..+|+|++++|+
T Consensus 499 ~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~--- 555 (741)
T PRK11033 499 PEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR--- 555 (741)
T ss_pred CCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE---
Confidence 4445555442 11221 23332 34578776643 11 2244456778899999999985
Q ss_pred cccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh
Q 003468 590 LREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI 669 (817)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 669 (817)
|..++|+++|+|++||+++++|++|+++|++++|+|||+..++..+|+++
T Consensus 556 ------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 556 ------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred ------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 24699999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 670 GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 670 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+. .+++..|++|..+++.+++. +.|+|+|||.||+|||+.||||||
T Consensus 606 gi~--------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia 652 (741)
T PRK11033 606 GID--------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIA 652 (741)
T ss_pred CCC--------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEE
Confidence 994 24568899999999999965 589999999999999999999999
Q ss_pred eCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhh
Q 003468 750 MGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNL 810 (817)
Q Consensus 750 mg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 810 (817)
|| ++++.++++||+++.++++.++..+++.||++++||++++.|.+.+|+..+...++++
T Consensus 653 ~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~ 712 (741)
T PRK11033 653 MG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGI 712 (741)
T ss_pred ec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99 7999999999999999999999999999999999999999999999988777666543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-76 Score=648.77 Aligned_cols=525 Identities=24% Similarity=0.348 Sum_probs=429.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCC
Q 003468 116 PLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSS 195 (817)
Q Consensus 116 ~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g 195 (817)
+..++.++.+..+++.....++..++.+|..+.|.++.++.+|+..++|+.+.|++||+|+|.||++||+||++++ |
T Consensus 344 ~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~---G 420 (951)
T KOG0207|consen 344 SPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD---G 420 (951)
T ss_pred cHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEe---C
Confidence 4444445555556666666666788999999999999999999623899999999999999999999999999995 7
Q ss_pred eEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhH
Q 003468 196 TVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLK 275 (817)
Q Consensus 196 ~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~ 275 (817)
+++||||++|||+.||.|+++ ..|.+||++.+|+....++++|.+|.+++|.++++++ +..++|+|
T Consensus 421 ss~VDEs~iTGEs~PV~Kk~g------------s~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEA--Q~sKapiQ 486 (951)
T KOG0207|consen 421 SSEVDESLITGESMPVPKKKG------------STVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEA--QLSKAPIQ 486 (951)
T ss_pred ceeechhhccCCceecccCCC------------CeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHH--HcccchHH
Confidence 889999999999999999987 5799999999999999999999999999999999999 78899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHH
Q 003468 276 KKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGT 355 (817)
Q Consensus 276 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~ 355 (817)
+.+|+++.++++++++++++.|++|++..... ..++..+ +..+...|..++++++++|||+|+++.|++.+.+.
T Consensus 487 q~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---~~~~~~~---~~~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 487 QLADKIAGYFVPVVIVLSLATFVVWILIGKIV---FKYPRSF---FDAFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred HHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---ccCcchh---hHHHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 99999999999999999999988887654210 1111111 36667889999999999999999999999999999
Q ss_pred HHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCH
Q 003468 356 RKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDA 435 (817)
Q Consensus 356 ~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (817)
...+++|+|+|..+.+|.+.++++|+||||||||+|+|.|.++....+. ....
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------------------------~~~~ 613 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------------------------ISLK 613 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc---------------------------ccHH
Confidence 9999999999999999999999999999999999999999998875421 0011
Q ss_pred HHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCC
Q 003468 436 NLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDR 515 (817)
Q Consensus 436 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s 515 (817)
....+.. +.-. .+.||...|++.+++......... ..+..-.|.-
T Consensus 614 e~l~~v~--a~Es------------~SeHPig~AIv~yak~~~~~~~~~---------------------~~~~~~~~pg 658 (951)
T KOG0207|consen 614 EALALVA--AMES------------GSEHPIGKAIVDYAKEKLVEPNPE---------------------GVLSFEYFPG 658 (951)
T ss_pred HHHHHHH--HHhc------------CCcCchHHHHHHHHHhcccccCcc---------------------ccceeecccC
Confidence 1111111 1111 146899999999999876321100 0111111222
Q ss_pred CCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccc
Q 003468 516 DRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFET 595 (817)
Q Consensus 516 ~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~ 595 (817)
+.+...+.+. ++. .+-|.-+.+...- .. .+ +.+++.+++....|..+..++.
T Consensus 659 ~g~~~~~~~~---~~~--i~iGN~~~~~r~~--------~~--~~----~~i~~~~~~~e~~g~tvv~v~v--------- 710 (951)
T KOG0207|consen 659 EGIYVTVTVD---GNE--VLIGNKEWMSRNG--------CS--IP----DDILDALTESERKGQTVVYVAV--------- 710 (951)
T ss_pred CCcccceEEe---eeE--EeechHHHHHhcC--------CC--Cc----hhHHHhhhhHhhcCceEEEEEE---------
Confidence 2222222222 111 5667766665431 11 11 2366777778888988888874
Q ss_pred cCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCC
Q 003468 596 YDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH 675 (817)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~ 675 (817)
|.+++|+++++|++|+|+..+|+.|++.|++++|+|||+..+|+++|+++|+.
T Consensus 711 ------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--- 763 (951)
T KOG0207|consen 711 ------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--- 763 (951)
T ss_pred ------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---
Confidence 44699999999999999999999999999999999999999999999999963
Q ss_pred ccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCcc
Q 003468 676 EDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGT 755 (817)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~ 755 (817)
.||+...|+||.++|+.+|+.+..|+|+|||.||+|+|.+|||||||| .|+
T Consensus 764 ----------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs 814 (951)
T KOG0207|consen 764 ----------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGS 814 (951)
T ss_pred ----------------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-ccc
Confidence 389999999999999999999999999999999999999999999999 789
Q ss_pred HHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhh
Q 003468 756 EVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELN 809 (817)
Q Consensus 756 ~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 809 (817)
++|.++||+|++.|++..++.+++.+|++++|||.++.|.+.+|+..+...+..
T Consensus 815 ~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagv 868 (951)
T KOG0207|consen 815 DVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGV 868 (951)
T ss_pred HHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheec
Confidence 999999999999999999999999999999999999999999999866554443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-75 Score=657.68 Aligned_cols=480 Identities=41% Similarity=0.591 Sum_probs=419.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHh--hcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEE
Q 003468 121 LILIVNAIVGIWQESNAEKALEALKE--IQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVR 198 (817)
Q Consensus 121 ~~~i~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~ 198 (817)
++++++.+++.++++++++.++.+.+ ..+++++|+|+| + +.|++++|+|||+|.+++||+|||||+|++ |.+.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~-~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~ 78 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-W-KEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCF 78 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-e-EEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEE
Confidence 34566677899999999999999988 788899999999 6 899999999999999999999999999995 6899
Q ss_pred EeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHH
Q 003468 199 VEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKL 278 (817)
Q Consensus 199 Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l 278 (817)
||||+|||||.|+.|.++ +.+++||.+.+|++.+.|+++|.+|..+++...+..+ ...++++++++
T Consensus 79 vdes~LTGEs~pv~k~~g------------~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~--~~~k~~~~~~~ 144 (499)
T TIGR01494 79 VDESNLTGESVPVLKTAG------------DAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTG--FETKTPLQPKL 144 (499)
T ss_pred EEcccccCCCCCeeeccC------------CccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhc--CCCCCchHHHH
Confidence 999999999999999986 4589999999999999999999999999999998877 55578999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHH
Q 003468 279 NQFG-EVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRK 357 (817)
Q Consensus 279 ~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~ 357 (817)
+++. .+++++++++++++++++...+. .. ..+...+..++++++++|||+|++++++++..+..+
T Consensus 145 ~~~~~~~~~~~~~~la~~~~~~~~~~~~-----~~---------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~ 210 (499)
T TIGR01494 145 DRLSDIIFILFVLLIALAVFLFWAIGLW-----DP---------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDAR 210 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cc---------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 9998 67777777777777666543211 00 012456788999999999999999999999999999
Q ss_pred HhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHH
Q 003468 358 MAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANL 437 (817)
Q Consensus 358 l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (817)
|+++|+++|+++++|+||+++++|||||||||+|+|+|.+++..+.
T Consensus 211 ~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------- 256 (499)
T TIGR01494 211 LAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------- 256 (499)
T ss_pred HHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------------
Confidence 9999999999999999999999999999999999999999875320
Q ss_pred HHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCC
Q 003468 438 QTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDR 517 (817)
Q Consensus 438 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~ 517 (817)
.+.++||.+.|++.+++.. .+...||++.+
T Consensus 257 ---------------------~~~s~hp~~~ai~~~~~~~-----------------------------~~~~~~f~~~~ 286 (499)
T TIGR01494 257 ---------------------EYLSGHPDERALVKSAKWK-----------------------------ILNVFEFSSVR 286 (499)
T ss_pred ---------------------CcCCCChHHHHHHHHhhhc-----------------------------CcceeccCCCC
Confidence 0114689999999887531 12457999999
Q ss_pred ceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccC
Q 003468 518 KSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYD 597 (817)
Q Consensus 518 k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~ 597 (817)
++|+++++..++ .++||+++.++++|.. +.+..+.++.+|+|++++|++.
T Consensus 287 ~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a~~~--------- 336 (499)
T TIGR01494 287 KRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVASKE--------- 336 (499)
T ss_pred ceEEEEEecCCc---EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEEECC---------
Confidence 999999985222 4789999999998852 1233456788999999999752
Q ss_pred CCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcc
Q 003468 598 GDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHED 677 (817)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~ 677 (817)
.++|+++++|++|++++++|+.|+++|++++|+|||+..++..+|+++|+
T Consensus 337 ------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------ 386 (499)
T TIGR01494 337 ------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------ 386 (499)
T ss_pred ------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------
Confidence 48999999999999999999999999999999999999999999999986
Q ss_pred ccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH
Q 003468 678 ISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV 757 (817)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ 757 (817)
+++.+|++|.++++.+|..|+.|+|+|||.||+|||++||||||||
T Consensus 387 ----------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------ 432 (499)
T TIGR01494 387 ----------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------ 432 (499)
T ss_pred ----------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------
Confidence 3678999999999999999999999999999999999999999997
Q ss_pred HHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 758 AKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 758 ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
++++||+++.++++..+..++.+||++++++++++.|.+++|+..+...+++.+
T Consensus 433 a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~ 486 (499)
T TIGR01494 433 AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV 486 (499)
T ss_pred hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999998877776544
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-74 Score=656.98 Aligned_cols=515 Identities=26% Similarity=0.375 Sum_probs=426.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCC-ccceeeecCCccCCcEEEecCCCcccccEEEE
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDG-KKIPSLSAKELVPGDIVELKVGDKVPADMRLL 190 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g-~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll 190 (817)
.|.+++.++++++++.+++.++++|+++.+++|.+..|+.++|+|+| ++ ++|++++|+|||+|.|++||+|||||+|+
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi 95 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSE-EEVPVEELQVGDIVIVRPGERIPVDGVVI 95 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEeccceEEE
Confidence 56788899999999999999999999999999999999999999996 87 89999999999999999999999999999
Q ss_pred eecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCC
Q 003468 191 RLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEE 270 (817)
Q Consensus 191 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 270 (817)
+ |.+.||||+|||||.|+.|.++ +.+|+||.+.+|+++++|++||.+|.+|++.+++.++ ..+
T Consensus 96 ~---g~~~vdes~lTGEs~pv~k~~g------------~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~--~~~ 158 (556)
T TIGR01525 96 S---GESEVDESALTGESMPVEKKEG------------DEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA--QSS 158 (556)
T ss_pred e---cceEEeehhccCCCCCEecCCc------------CEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH--hhc
Confidence 5 6789999999999999999976 5799999999999999999999999999999999887 677
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHH
Q 003468 271 DTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTC 350 (817)
Q Consensus 271 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~ 350 (817)
++|+++.+++++.+++++++++++++|++++... .+ ..+..++++++++|||+|++++|++
T Consensus 159 ~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------~~------------~~~~~~~~vlv~~~P~al~l~~~~~ 219 (556)
T TIGR01525 159 KAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------AL------------GALYRALAVLVVACPCALGLATPVA 219 (556)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cc------------hHHHHHHHHHhhccccchhehhHHH
Confidence 8999999999999999988888888887764321 00 3567889999999999999999999
Q ss_pred HHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCC
Q 003468 351 LALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPV 430 (817)
Q Consensus 351 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (817)
+..+.++++++|+++|+++++|+||++|++|||||||||+|+|+|.++...+.. .
T Consensus 220 ~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------~----------- 274 (556)
T TIGR01525 220 ILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA--------------S----------- 274 (556)
T ss_pred HHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC--------------C-----------
Confidence 999999999999999999999999999999999999999999999998754310 0
Q ss_pred CCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEe
Q 003468 431 GRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFAT 510 (817)
Q Consensus 431 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 510 (817)
... ..++..++.+.. ...||.+.|+++++++.|..... + + ....
T Consensus 275 -~~~---~~~l~~a~~~e~-----------~~~hp~~~Ai~~~~~~~~~~~~~------~--------------~-~~~~ 318 (556)
T TIGR01525 275 -ISE---EELLALAAALEQ-----------SSSHPLARAIVRYAKKRGLELPK------Q--------------E-DVEE 318 (556)
T ss_pred -ccH---HHHHHHHHHHhc-----------cCCChHHHHHHHHHHhcCCCccc------c--------------c-CeeE
Confidence 001 112222111111 13689999999999876653210 0 0 0011
Q ss_pred eccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccc
Q 003468 511 LEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDL 590 (817)
Q Consensus 511 ~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~ 590 (817)
++ .+++. .+++|+++..+..|++... ++. .. ....+.+..+..+|+|++.++.
T Consensus 319 ~~----~~gi~-----------~~~~g~~~~~lg~~~~~~~-~~~--~~-----~~~~~~~~~~~~~g~~~~~v~~---- 371 (556)
T TIGR01525 319 VP----GKGVE-----------ATVDGQEEVRIGNPRLLEL-AAE--PI-----SASPDLLNEGESQGKTVVFVAV---- 371 (556)
T ss_pred ec----CCeEE-----------EEECCeeEEEEecHHHHhh-cCC--Cc-----hhhHHHHHHHhhCCcEEEEEEE----
Confidence 11 12222 2233333333333332210 111 01 1123455677889999988873
Q ss_pred ccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcC-CeEEEECCCCHhhHHHHHHHh
Q 003468 591 REFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAG-IRVMVITGDNKNTAEAICREI 669 (817)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~g-i~v~~~TGd~~~~a~~ia~~~ 669 (817)
|.+++|.+.++|+++|+++++|++|+++| ++++|+|||+..++..+++++
T Consensus 372 -----------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 372 -----------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred -----------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 34699999999999999999999999999 999999999999999999999
Q ss_pred CCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 670 GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 670 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+.. +|++..|++|.++++.++..++.|+|+|||.||++|++.||+||+
T Consensus 423 gi~~-------------------------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia 471 (556)
T TIGR01525 423 GIDE-------------------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIA 471 (556)
T ss_pred CCCe-------------------------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEE
Confidence 9942 677889999999999999999999999999999999999999999
Q ss_pred eCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 750 MGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 750 mg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
|| ++++.+++.||+++.+++++.+..++++||+++++|++++.|.+.+|+..+...+++++.
T Consensus 472 ~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~ 533 (556)
T TIGR01525 472 MG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLP 533 (556)
T ss_pred eC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99 789999999999999999999999999999999999999999999999998887776653
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-73 Score=645.63 Aligned_cols=495 Identities=28% Similarity=0.419 Sum_probs=416.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEe
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLR 191 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~ 191 (817)
.|+++..++++++++.+++.++++|+++.+++|.+..+++++|+|+|++ +++++++|+|||+|.|++||+|||||+|++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~ 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSL-EEVAVEELKVGDVVVVKPGERVPVDGVVLS 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEE-EEEEHHHCCCCCEEEEcCCCEeecceEEEe
Confidence 5778888989999999999999999999999999999999999999998 899999999999999999999999999995
Q ss_pred ecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCC
Q 003468 192 LTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEED 271 (817)
Q Consensus 192 ~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 271 (817)
|.+.||||+|||||.|+.|+++ +.+|+||.+.+|++.++|++||.+|.+|++.+++.++ ..++
T Consensus 96 ---g~~~vdes~lTGEs~pv~k~~g------------~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~--~~~~ 158 (536)
T TIGR01512 96 ---GTSTVDESALTGESVPVEKAPG------------DEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA--QSRK 158 (536)
T ss_pred ---CcEEEEecccCCCCCcEEeCCC------------CEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHH--hhCC
Confidence 6789999999999999999986 5799999999999999999999999999999999887 6678
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHH
Q 003468 272 TPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCL 351 (817)
Q Consensus 272 ~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~ 351 (817)
+|+++.+++++.+++++++++++++|+++..+ ..| ...+.+++++++++|||+|++++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----------~~~~~~~~svlv~~~P~aL~la~~~~~ 220 (536)
T TIGR01512 159 AKTQRFIDRFARYYTPVVLAIALAIWLVPGLL-------KRW-----------PFWVYRALVLLVVASPCALVISAPAAY 220 (536)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccc-----------HHHHHHHHHHHhhcCccccccchHHHH
Confidence 99999999999999999888888877765432 112 125677899999999999999999999
Q ss_pred HhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCC
Q 003468 352 ALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVG 431 (817)
Q Consensus 352 ~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (817)
..+.++++++|+++|+++++|++|++|++|||||||||+|+|+|.+++..
T Consensus 221 ~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------ 270 (536)
T TIGR01512 221 LSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------ 270 (536)
T ss_pred HHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------
Confidence 99999999999999999999999999999999999999999999987521
Q ss_pred CCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEee
Q 003468 432 RMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATL 511 (817)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 511 (817)
.++..++.+. . ...||.+.|+++++++.+ .. .....+
T Consensus 271 -------~~l~~a~~~e-----~------~~~hp~~~Ai~~~~~~~~-~~------------------------~~~~~~ 307 (536)
T TIGR01512 271 -------EVLRLAAAAE-----Q------ASSHPLARAIVDYARKRE-NV------------------------ESVEEV 307 (536)
T ss_pred -------HHHHHHHHHh-----c------cCCCcHHHHHHHHHHhcC-CC------------------------cceEEe
Confidence 1111111111 1 136899999999987643 00 001111
Q ss_pred ccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccc
Q 003468 512 EFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLR 591 (817)
Q Consensus 512 ~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~ 591 (817)
| .+.+...+ +|. .+..|+++.+.+.. . ..+..+|.+++.++
T Consensus 308 ~----g~gi~~~~---~g~--~~~ig~~~~~~~~~------------~------------~~~~~~~~~~~~v~------ 348 (536)
T TIGR01512 308 P----GEGVRAVV---DGG--EVRIGNPRSLEAAV------------G------------ARPESAGKTIVHVA------ 348 (536)
T ss_pred c----CCeEEEEE---CCe--EEEEcCHHHHhhcC------------C------------cchhhCCCeEEEEE------
Confidence 1 12222222 222 23457765443210 0 02344565554443
Q ss_pred cccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCC-eEEEECCCCHhhHHHHHHHhC
Q 003468 592 EFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGI-RVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi-~v~~~TGd~~~~a~~ia~~~g 670 (817)
.|..++|.+.++|+++|+++++|++|+++|+ +++|+|||+..++..+++++|
T Consensus 349 ---------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lg 401 (536)
T TIGR01512 349 ---------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG 401 (536)
T ss_pred ---------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcC
Confidence 3567999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 671 VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 671 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
+.. +|++..|++|..+++.++..++.|+|+|||.||++|++.||+||+|
T Consensus 402 i~~-------------------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~ 450 (536)
T TIGR01512 402 IDE-------------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM 450 (536)
T ss_pred Chh-------------------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe
Confidence 942 4567889999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 751 g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
|.++++.++++||+++.++++..+.++++.||+++++|++++.|++.+|+..+...+++++.
T Consensus 451 g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~ 512 (536)
T TIGR01512 451 GASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLP 512 (536)
T ss_pred CCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 96688999999999999999999999999999999999999999999998888777766543
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-72 Score=638.99 Aligned_cols=499 Identities=27% Similarity=0.393 Sum_probs=413.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecC-CccceeeecCCccCCcEEEecCCCcccccEEEE
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRD-GKKIPSLSAKELVPGDIVELKVGDKVPADMRLL 190 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~-g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll 190 (817)
+|..+..++++++++.+++.+.++|+++.+++|.++.|++++++|+ |.+ ++|++++|+|||+|.|++||+|||||+|+
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~-~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~ 131 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSI-EEVPVALLQPGDIVKVLPGEKIPVDGTVI 131 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEecCceEEE
Confidence 3444555666777788899999999999999999999999999986 555 89999999999999999999999999999
Q ss_pred eecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCC
Q 003468 191 RLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEE 270 (817)
Q Consensus 191 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 270 (817)
+ |.+.||||+|||||.|+.|+++ +.+|+||.+.+|.+.++|+++|.+|.+|++.++++++ ..+
T Consensus 132 ~---g~~~vdes~lTGEs~pv~k~~g------------d~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a--~~~ 194 (562)
T TIGR01511 132 E---GESEVDESLVTGESLPVPKKVG------------DPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQA--QQS 194 (562)
T ss_pred E---CceEEehHhhcCCCCcEEcCCC------------CEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHH--Hhc
Confidence 5 6789999999999999999987 5699999999999999999999999999999999988 777
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHH
Q 003468 271 DTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTC 350 (817)
Q Consensus 271 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~ 350 (817)
++|+++.+++++.++++++++++++.+++|. ..+..++++++++|||+|++++|++
T Consensus 195 k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------------~~~~~~~svlvvacPcaL~la~p~a 250 (562)
T TIGR01511 195 KAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------------FALEFAVTVLIIACPCALGLATPTV 250 (562)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHhccchhhhHHHHH
Confidence 8999999999999999988888877766542 2456789999999999999999999
Q ss_pred HHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCC
Q 003468 351 LALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPV 430 (817)
Q Consensus 351 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (817)
+..+..+++++|+++|++.++|+|+++|+||||||||||+|+|++.++...+..
T Consensus 251 ~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-------------------------- 304 (562)
T TIGR01511 251 IAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-------------------------- 304 (562)
T ss_pred HHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------------------------
Confidence 999999999999999999999999999999999999999999999998653210
Q ss_pred CCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEe
Q 003468 431 GRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFAT 510 (817)
Q Consensus 431 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 510 (817)
....+ +..+.+++.. +.||.+.|+++++++.+...... .....
T Consensus 305 --~~~~~--l~~aa~~e~~------------s~HPia~Ai~~~~~~~~~~~~~~---------------------~~~~~ 347 (562)
T TIGR01511 305 --DRTEL--LALAAALEAG------------SEHPLAKAIVSYAKEKGITLVEV---------------------SDFKA 347 (562)
T ss_pred --CHHHH--HHHHHHHhcc------------CCChHHHHHHHHHHhcCCCcCCC---------------------CCeEE
Confidence 01111 1112222221 35899999999998766532100 00111
Q ss_pred eccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccc
Q 003468 511 LEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDL 590 (817)
Q Consensus 511 ~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~ 590 (817)
+| .+.+...++ | ..+..|+++.+.+.. . .++ .+..+|.+++.++
T Consensus 348 ~~----g~Gi~~~~~---g--~~~~iG~~~~~~~~~--------~--~~~------------~~~~~g~~~~~~~----- 391 (562)
T TIGR01511 348 IP----GIGVEGTVE---G--TKIQLGNEKLLGENA--------I--KID------------GKAEQGSTSVLVA----- 391 (562)
T ss_pred EC----CceEEEEEC---C--EEEEEECHHHHHhCC--------C--CCC------------hhhhCCCEEEEEE-----
Confidence 11 233333332 2 335678877654321 0 011 1234677766554
Q ss_pred ccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC
Q 003468 591 REFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
.|.+++|++.++|++||+++++|++|++.|++++|+|||+..++..+++++|
T Consensus 392 ----------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lg 443 (562)
T TIGR01511 392 ----------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG 443 (562)
T ss_pred ----------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcC
Confidence 3567999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 671 VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 671 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
+. +|++..|++|.++++.++..++.|+|+|||.||++|++.||+||+|
T Consensus 444 i~--------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~ 491 (562)
T TIGR01511 444 IN--------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI 491 (562)
T ss_pred Cc--------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe
Confidence 82 4567889999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 751 g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
| .+++.+++.||+++.++++..+..+++.||+++++|++++.|.+.+|+..+...+.++.-
T Consensus 492 g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~ 552 (562)
T TIGR01511 492 G-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYP 552 (562)
T ss_pred C-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 9 789999999999999999999999999999999999999999999999877666644433
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-75 Score=622.97 Aligned_cols=636 Identities=23% Similarity=0.315 Sum_probs=447.8
Q ss_pred CCCCCCCCCccccccccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHH
Q 003468 10 KRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLS-VGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILL 88 (817)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GL~-~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll 88 (817)
+|+..++| .+-+.....+.++....|..+ +|+. ..++.....+||+|+...+.+ +|..+|.+.-..|++.+..
T Consensus 132 ~ry~~~~e---~~~F~~~~fp~~~~~g~~~k~--~G~~~~~~i~~a~~~~G~N~fdi~vP-tF~eLFkE~A~aPfFVFQV 205 (1160)
T KOG0209|consen 132 KRYLYDEE---KGKFSRLTFPTDEPFGYFQKS--TGHEEESEIKLAKHKYGKNKFDIVVP-TFSELFKEHAVAPFFVFQV 205 (1160)
T ss_pred eeEEEccc---ccceeccccCcCCcchhhhhc--cCcchHHHHHHHHHHhcCCccccCCc-cHHHHHHHhccCceeeHhH
Confidence 34444443 223334445666666666655 4666 344555556699999987654 7888888888877776655
Q ss_pred HHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh--cccceEEecCCccceeeec
Q 003468 89 VAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEI--QSEQATVTRDGKKIPSLSA 166 (817)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~--~~~~~~V~r~g~~~~~i~~ 166 (817)
++..+|+ .+. +|+.++.-+++++.-..--.+|+.++ +..++++ .|..+.|.|+++| +.+.+
T Consensus 206 FcvgLWC----LDe---------yWYySlFtLfMli~fE~tlV~Qrm~~---lse~R~Mg~kpy~I~v~R~kKW-~~l~s 268 (1160)
T KOG0209|consen 206 FCVGLWC----LDE---------YWYYSLFTLFMLIAFEATLVKQRMRT---LSEFRTMGNKPYTINVYRNKKW-VKLMS 268 (1160)
T ss_pred HhHHHHH----hHH---------HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCceEEEEEecCcc-eeccc
Confidence 5554444 332 67777777666665444444555444 4444443 4557899999999 89999
Q ss_pred CCccCCcEEEecC---CCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCC-----CCCCccceeeeCcEEe
Q 003468 167 KELVPGDIVELKV---GDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENS-----DIQGKKCMVFAGTTVV 238 (817)
Q Consensus 167 ~dLv~GDII~l~~---G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~-----~~~~~~~~l~~Gt~v~ 238 (817)
+||.|||+|.+.. ...||||.+|| .|.|.|||++|||||.|.-|.+....+.. .-.++.+++|.||.++
T Consensus 269 eeLlPgDvVSI~r~~ed~~vPCDllLL---~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkiv 345 (1160)
T KOG0209|consen 269 EELLPGDVVSIGRGAEDSHVPCDLLLL---RGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIV 345 (1160)
T ss_pred cccCCCceEEeccCcccCcCCceEEEE---ecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEE
Confidence 9999999999976 66899999999 58999999999999999999876433211 1235788999999998
Q ss_pred e-------------CeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003468 239 N-------------GTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFL 305 (817)
Q Consensus 239 ~-------------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 305 (817)
+ |-+.+.|++||.+|..|++.+.+... .++-|.-.+ +.+ .++.+.++++++... +.
T Consensus 346 Qht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~--aervTaNn~--Etf--~FILFLlVFAiaAa~--Yv--- 414 (1160)
T KOG0209|consen 346 QHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFS--AERVTANNR--ETF--IFILFLLVFAIAAAG--YV--- 414 (1160)
T ss_pred EecCCccccccCCCCCeEEEEEeccccccCCceeeeEEec--ceeeeeccH--HHH--HHHHHHHHHHHHhhh--eE---
Confidence 4 56999999999999999999988875 233332211 122 122222222222111 11
Q ss_pred cccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCC
Q 003468 306 TWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKT 385 (817)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKT 385 (817)
|. .|........ ...|.-++.++...+|+-||+-++++...+...|+|.++.|..+-.+.-.|+||+.|||||
T Consensus 415 -wv--~Gskd~~Rsr----YKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKT 487 (1160)
T KOG0209|consen 415 -WV--EGSKDPTRSR----YKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKT 487 (1160)
T ss_pred -EE--ecccCcchhh----hheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCC
Confidence 11 1110000000 1223345567788899999999999999999999999999999999999999999999999
Q ss_pred cccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCCh
Q 003468 386 GTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMP 465 (817)
Q Consensus 386 GTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 465 (817)
||||+..|.|.++-......+.. +. .+. .....+. .++.||+... .+++ ..|||
T Consensus 488 GTLT~d~lvv~Gvag~~~~~~~~---------~~-----~s~----~p~~t~~----vlAscHsLv~-le~~---lVGDP 541 (1160)
T KOG0209|consen 488 GTLTEDDLVVEGVAGLSADEGAL---------TP-----ASK----APNETVL----VLASCHSLVL-LEDK---LVGDP 541 (1160)
T ss_pred CccccccEEEEecccccCCcccc---------cc-----hhh----CCchHHH----HHHHHHHHHH-hcCc---ccCCh
Confidence 99999999999986532211100 00 000 1122233 3345554211 1111 57999
Q ss_pred hHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecC----CcEEEEEeCcchH
Q 003468 466 TEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSS----GNKKLLVKGAVEN 541 (817)
Q Consensus 466 ~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~----~~~~~~~KGa~e~ 541 (817)
.|.|.+.. .|+.....+... +.+ ..-...++.+++.|.|..|||||+++... -++++.+|||||.
T Consensus 542 lEKA~l~~---v~W~~~k~~~v~--p~~------~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEv 610 (1160)
T KOG0209|consen 542 LEKATLEA---VGWNLEKKNSVC--PRE------GNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEV 610 (1160)
T ss_pred HHHHHHHh---cCcccccCcccC--CCc------CCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHH
Confidence 99998865 344432221110 000 00113456789999999999999987532 3578899999999
Q ss_pred HHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCe
Q 003468 542 LLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRL 621 (817)
Q Consensus 542 il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 621 (817)
|.++.... ...+.+...+|+++|.||+|++||++..-. .....+.+++.+|+||
T Consensus 611 i~~ml~dv--------------P~dY~~iYk~ytR~GsRVLALg~K~l~~~~------------~~q~rd~~Re~vEsdL 664 (1160)
T KOG0209|consen 611 IQEMLRDV--------------PKDYDEIYKRYTRQGSRVLALGYKPLGDMM------------VSQVRDLKREDVESDL 664 (1160)
T ss_pred HHHHHHhC--------------chhHHHHHHHHhhccceEEEEecccccccc------------hhhhhhhhhhhhhhcc
Confidence 99876532 245778899999999999999999885311 0112345678899999
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCC------------ccc-----------
Q 003468 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH------------EDI----------- 678 (817)
Q Consensus 622 ~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~------------~~~----------- 678 (817)
+|.|++.|..|+++|++++|+.|++.+++++|+|||++.||.++|+++|+.... .++
T Consensus 665 tFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~l 744 (1160)
T KOG0209|consen 665 TFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVL 744 (1160)
T ss_pred eeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceee
Confidence 999999999999999999999999999999999999999999999999995420 000
Q ss_pred --------------cccccChhHHHHHHHHh--HhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhh
Q 003468 679 --------------SSQSITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 742 (817)
Q Consensus 679 --------------~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~ 742 (817)
+...++|+.++.+.... ..+ .....||||+.|.||..++..+++.|..++|+|||.||+.|||
T Consensus 745 p~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l-~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK 823 (1160)
T KOG0209|consen 745 PLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRL-IPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALK 823 (1160)
T ss_pred cCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHh-hhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhh
Confidence 22356677777763322 222 1257799999999999999999999999999999999999999
Q ss_pred hCCceEEeCCC
Q 003468 743 LADIGVAMGIA 753 (817)
Q Consensus 743 ~A~vgiamg~~ 753 (817)
+||||||+=++
T Consensus 824 ~AhVGVALL~~ 834 (1160)
T KOG0209|consen 824 QAHVGVALLNN 834 (1160)
T ss_pred hcccceehhcC
Confidence 99999998533
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-71 Score=657.77 Aligned_cols=507 Identities=24% Similarity=0.339 Sum_probs=423.4
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEe
Q 003468 113 FVE-PLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLR 191 (817)
Q Consensus 113 ~~~-~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~ 191 (817)
|++ +..+++++.++.+++.+.+.|+++.+++|.++.|+.++|+|+|++ ++|+.++|+|||+|.|++||+|||||+|++
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~-~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~ 363 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGE-KSVPLADVQPGMLLRLTTGDRVPVDGEITQ 363 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcE-EEEEHHHcCCCCEEEEcCCCEeeeeEEEEE
Confidence 444 677777888899999999999999999999999999999999998 899999999999999999999999999996
Q ss_pred ecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCC
Q 003468 192 LTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEED 271 (817)
Q Consensus 192 ~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 271 (817)
|.+.||||+|||||.|+.|.++ +.+|+||.+.+|.+.++|+++|.+|.+|+|.++++++ +..+
T Consensus 364 ---g~~~vdeS~lTGEs~pv~k~~g------------d~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a--~~~k 426 (834)
T PRK10671 364 ---GEAWLDEAMLTGEPIPQQKGEG------------DSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA--QSSK 426 (834)
T ss_pred ---ceEEEeehhhcCCCCCEecCCC------------CEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHH--hccC
Confidence 6789999999999999999987 5699999999999999999999999999999999988 6678
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHH
Q 003468 272 TPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCL 351 (817)
Q Consensus 272 ~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~ 351 (817)
+++++.+++++.++++++++++++.+++|+.. +.+ ..+...+.+++++++++|||+|++++|+++
T Consensus 427 ~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~-------~~~--------~~~~~~~~~a~~vlv~acPcaL~la~p~a~ 491 (834)
T PRK10671 427 PEIGQLADKISAVFVPVVVVIALVSAAIWYFF-------GPA--------PQIVYTLVIATTVLIIACPCALGLATPMSI 491 (834)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCc--------hHHHHHHHHHHHHHHHhcccchhhhHHHHH
Confidence 99999999999999999888888877766432 111 012345778999999999999999999999
Q ss_pred HhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCC
Q 003468 352 ALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVG 431 (817)
Q Consensus 352 ~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (817)
..++.+++++|+++|+++++|+|+++|++|||||||||+|+|+|.+++..+. .
T Consensus 492 ~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------~------------- 544 (834)
T PRK10671 492 ISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG--------------V------------- 544 (834)
T ss_pred HHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC--------------C-------------
Confidence 9999999999999999999999999999999999999999999998764320 0
Q ss_pred CCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEee
Q 003468 432 RMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATL 511 (817)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 511 (817)
.... .+..+.+++.. +.||.+.|++++++....... -
T Consensus 545 -~~~~--~l~~a~~~e~~------------s~hp~a~Ai~~~~~~~~~~~~----------------------------~ 581 (834)
T PRK10671 545 -DEAQ--ALRLAAALEQG------------SSHPLARAILDKAGDMTLPQV----------------------------N 581 (834)
T ss_pred -CHHH--HHHHHHHHhCC------------CCCHHHHHHHHHHhhCCCCCc----------------------------c
Confidence 0111 12222233322 368999999988753221100 0
Q ss_pred ccCCC-CceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccc
Q 003468 512 EFDRD-RKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDL 590 (817)
Q Consensus 512 ~F~s~-~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~ 590 (817)
+|... .+.+...+ +| ..+.+|+++.+.+.. +. ++.+.+.++.+..+|.+++.+++.
T Consensus 582 ~~~~~~g~Gv~~~~---~g--~~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~~~v~va~~--- 638 (834)
T PRK10671 582 GFRTLRGLGVSGEA---EG--HALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGATPVLLAVD--- 638 (834)
T ss_pred cceEecceEEEEEE---CC--EEEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCCeEEEEEEC---
Confidence 11110 12222222 22 245679998764421 11 123455667788899999888852
Q ss_pred ccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC
Q 003468 591 REFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
..++|++.+.|++||+++++|++|++.|++++|+|||+..++..+++++|
T Consensus 639 ------------------------------~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 639 ------------------------------GKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred ------------------------------CEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 35899999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 671 VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 671 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
+.. ++++..|++|.++++.++..++.|+|+|||.||++|++.||+||||
T Consensus 689 i~~-------------------------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 689 IDE-------------------------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred CCE-------------------------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 942 6788899999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHH
Q 003468 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLE 807 (817)
Q Consensus 751 g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 807 (817)
| ++++.++++||+++.++++++|..++++||+++++|++++.|.+.+|+..+...+
T Consensus 738 g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 738 G-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred c-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 7999999999999999999999999999999999999999999999988766554
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-61 Score=493.02 Aligned_cols=533 Identities=25% Similarity=0.363 Sum_probs=410.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCCc--chhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhccc-ceEEec
Q 003468 80 NDTLVRILLVAAVVSFVLAWYDGEEGGE--MEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE-QATVTR 156 (817)
Q Consensus 80 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V~r 156 (817)
++|..++.++.+++..++.+++...++. +..++....+++++.+++.-+-+.+.|-|.+.+-+.|++...+ .+++++
T Consensus 31 kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~ 110 (681)
T COG2216 31 KNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLR 110 (681)
T ss_pred hCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhc
Confidence 5666677777777777665555443332 2222233344555566666777788888877777778765544 567777
Q ss_pred C-CccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCc
Q 003468 157 D-GKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGT 235 (817)
Q Consensus 157 ~-g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt 235 (817)
+ |.+ +.+++.+|..||+|.|++||.||+||.+++ |...||||.+||||.||.|.++-. ..-+-.||
T Consensus 111 ~~g~~-~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asVdESAITGESaPViresGgD---------~ssVtGgT 177 (681)
T COG2216 111 ADGSI-EMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASVDESAITGESAPVIRESGGD---------FSSVTGGT 177 (681)
T ss_pred CCCCe-eeccccccccCCEEEEecCCCccCCCeEEe---eeeecchhhccCCCcceeeccCCC---------cccccCCc
Confidence 7 666 999999999999999999999999999996 778999999999999999998732 23488999
Q ss_pred EEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCc
Q 003468 236 TVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPR 315 (817)
Q Consensus 236 ~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 315 (817)
.+++.|.+.++++...+|++.|+..+++.+ +.++||-+-.+.-+..-++++.++.....+.+. .|. ++-
T Consensus 178 ~v~SD~l~irita~pG~sFlDrMI~LVEgA--~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a--~y~-----~g~-- 246 (681)
T COG2216 178 RVLSDWLKIRITANPGETFLDRMIALVEGA--ERQKTPNEIALTILLSGLTLIFLLAVATLYPFA--IYS-----GGG-- 246 (681)
T ss_pred EEeeeeEEEEEEcCCCccHHHHHHHHhhch--hccCChhHHHHHHHHHHHHHHHHHHHHhhhhHH--HHc-----CCC--
Confidence 999999999999999999999999999998 788899776665544444332222221111111 111 111
Q ss_pred ccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEE
Q 003468 316 NFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV 395 (817)
Q Consensus 316 ~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v 395 (817)
...+...++++++.+|-.++..++..-..++.|+.+.|++-++..++|..|.||++..|||||+|-|+-..
T Consensus 247 ---------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A 317 (681)
T COG2216 247 ---------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQA 317 (681)
T ss_pred ---------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhh
Confidence 11244567899999999999888887788999999999999999999999999999999999999988776
Q ss_pred EEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHH
Q 003468 396 TKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVE 475 (817)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~ 475 (817)
.++.+.+. .. .+.++..+.+++-. ...|.-..++.+++
T Consensus 318 ~~f~p~~g----------------------------v~---~~~la~aa~lsSl~-----------DeTpEGrSIV~LA~ 355 (681)
T COG2216 318 SEFIPVPG----------------------------VS---EEELADAAQLASLA-----------DETPEGRSIVELAK 355 (681)
T ss_pred hheecCCC----------------------------CC---HHHHHHHHHHhhhc-----------cCCCCcccHHHHHH
Confidence 66654321 11 12334433333211 13477788999999
Q ss_pred HcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCc
Q 003468 476 KMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGS 555 (817)
Q Consensus 476 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~ 555 (817)
+.++...... ....-..+||+.+.|++++-.. ++ ..+.|||.+.+.+.-+. .+|+
T Consensus 356 ~~~~~~~~~~------------------~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~---~~g~ 410 (681)
T COG2216 356 KLGIELREDD------------------LQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRE---RGGH 410 (681)
T ss_pred HhccCCCccc------------------ccccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHh---cCCC
Confidence 9886432110 0001246899988877666543 22 67889999999886541 1221
Q ss_pred eeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcH
Q 003468 556 VVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPRE 635 (817)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~ 635 (817)
+ ...+...+++-++.|=..++++. |-.++|++.++|-++|
T Consensus 411 ---~----p~~l~~~~~~vs~~GGTPL~V~~---------------------------------~~~~~GVI~LkDivK~ 450 (681)
T COG2216 411 ---I----PEDLDAAVDEVSRLGGTPLVVVE---------------------------------NGRILGVIYLKDIVKP 450 (681)
T ss_pred ---C----CHHHHHHHHHHHhcCCCceEEEE---------------------------------CCEEEEEEEehhhcch
Confidence 1 13566777888899988888873 3469999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHH
Q 003468 636 EVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQ 715 (817)
Q Consensus 636 ~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 715 (817)
+.++-+.+||+.||+.+|+||||+.||..||++.|++. ..+.++||+|.
T Consensus 451 Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-------------------------------fiAeatPEdK~ 499 (681)
T COG2216 451 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FIAEATPEDKL 499 (681)
T ss_pred hHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-------------------------------hhhcCChHHHH
Confidence 99999999999999999999999999999999999963 34689999999
Q ss_pred HHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHH
Q 003468 716 EIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSI 784 (817)
Q Consensus 716 ~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~ 784 (817)
++++.-|..|+.|+|+|||.||+|+|.+||||+||. +|+..|||++++|=+|.|...+.+.++.|+.+
T Consensus 500 ~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 500 ALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred HHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 999999999999999999999999999999999998 89999999999999999999999999999874
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=304.90 Aligned_cols=228 Identities=35% Similarity=0.567 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccc-eEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeE
Q 003468 119 IFLILIVNAIVGIWQESNAEKALEALKEIQSEQ-ATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTV 197 (817)
Q Consensus 119 il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~ 197 (817)
|+++++++.+++.++++|+++.++++++..+++ ++|.|+|++ +.++++||+|||||.|++||++||||+|++ +|.+
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~-~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~ 78 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRW-QKIPSSELVPGDIIILKAGDIVPADGILLE--SGSA 78 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEE-EEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEecccc-ccchHhhccceeeeecccccccccCcccee--cccc
Confidence 566777888899999999999999999888886 999999998 999999999999999999999999999996 6999
Q ss_pred EEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHH
Q 003468 198 RVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKK 277 (817)
Q Consensus 198 ~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~ 277 (817)
+||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|++.++|++||.+|..|++.+.+..+ ..+++++++.
T Consensus 79 ~vd~s~ltGes~pv~k~~~-------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~--~~~~~~~~~~ 149 (230)
T PF00122_consen 79 YVDESALTGESEPVKKTPL-------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS--ESKKSPLERK 149 (230)
T ss_dssp EEECHHHHSBSSEEEESSS-------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS--CSS-THHHHH
T ss_pred ccccccccccccccccccc-------cccccchhhccccccccccccccceeeecccccccccccccc--cccchhhhhh
Confidence 9999999999999999953 234458999999999999999999999999999999988776 5567999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHH
Q 003468 278 LNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRK 357 (817)
Q Consensus 278 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~ 357 (817)
++++..++.+++++++++++++++... . ...+...+..++++++++||++||+++++++..+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~ 214 (230)
T PF00122_consen 150 LNKIAKILIIIILAIAILVFIIWFFND----S-----------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARR 214 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHTGS----T-----------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcccccchhhhccceecc----c-----------ccccccccccccceeeeecccceeehHHHHHHHHHHH
Confidence 999999998888888877775544310 0 1112456778899999999999999999999999999
Q ss_pred Hhhccccccccccccc
Q 003468 358 MAQKNALVRKLPSVET 373 (817)
Q Consensus 358 l~k~~ilvk~~~~le~ 373 (817)
|+++|+++|+++++|+
T Consensus 215 ~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 215 LAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHTTEEESSTTHHHH
T ss_pred HHHCCEEEeCcccccC
Confidence 9999999999999984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-21 Score=195.35 Aligned_cols=97 Identities=47% Similarity=0.844 Sum_probs=92.1
Q ss_pred CeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhc
Q 003468 620 RLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLR 699 (817)
Q Consensus 620 ~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (817)
++.++|.+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 56799999999999999999999999999999999999999999999999994
Q ss_pred cCCceEEEec--CcccH--HHHHHHHhcCCCEEEEEcCCccCHHHhhhCC
Q 003468 700 QDGGLLFSRA--EPRHK--QEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 745 (817)
Q Consensus 700 ~~~~~v~~r~--~p~~K--~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~ 745 (817)
+..+|++. +|++| .++++.++..++.|+|+|||.||++|+++||
T Consensus 168 --~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 --DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 45689999 99999 9999999988789999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-17 Score=175.07 Aligned_cols=274 Identities=16% Similarity=0.226 Sum_probs=184.9
Q ss_pred eCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccc-cCCCC--------------
Q 003468 536 KGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFET-YDGDE-------------- 600 (817)
Q Consensus 536 KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~-~~~~~-------------- 600 (817)
-|-.+.+.+.|+.+++ +.++.|++..+|.++.+.+.+..-.|+ +++||||+....... ..++.
T Consensus 697 ~g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T 774 (1354)
T KOG4383|consen 697 FGFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIET 774 (1354)
T ss_pred ccHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhh
Confidence 4666788899999886 557889999999999999888888886 889999975432110 00000
Q ss_pred ------Ccchhhc---cC-----------CCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHh
Q 003468 601 ------DHPAHQL---LL-----------NPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660 (817)
Q Consensus 601 ------~~~~~~~---~~-----------~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~ 660 (817)
..+..++ .. ..+.....-++.+|.|++.+..+.+++..+.|+.|.++.||++..|-.+..
T Consensus 775 ~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdEL 854 (1354)
T KOG4383|consen 775 ACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDEL 854 (1354)
T ss_pred hccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHH
Confidence 0000000 00 011122334567899999999999999999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCc---------cccc-------ccc------ChhHHHHH------------HHH------------
Q 003468 661 TAEAICREIGVFGAHE---------DISS-------QSI------TGKEFMDI------------HNQ------------ 694 (817)
Q Consensus 661 ~a~~ia~~~gi~~~~~---------~~~~-------~~~------~~~~~~~~------------~~~------------ 694 (817)
..+-+|+++|+..... +... ... -.+++.++ ++.
T Consensus 855 kSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds 934 (1354)
T KOG4383|consen 855 KSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS 934 (1354)
T ss_pred HHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc
Confidence 9999999999953211 0000 000 00111111 000
Q ss_pred -----------------hHhhccC---------CceEEEecCcccHHHHHHHHhcCCCEEEEEcCCcc--CHHHhhhCCc
Q 003468 695 -----------------KNYLRQD---------GGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVN--DAPALKLADI 746 (817)
Q Consensus 695 -----------------~~~~~~~---------~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~N--D~~~l~~A~v 746 (817)
...+... -.-+|..++|+...++++.+|++|++|+++|...| ....+-+||+
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccce
Confidence 0000000 12268999999999999999999999999999988 4456689999
Q ss_pred eEEeCCCc------------cHH------------------HHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHh
Q 003468 747 GVAMGIAG------------TEV------------------AKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGF 796 (817)
Q Consensus 747 giamg~~~------------~~~------------------ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 796 (817)
+||+..-. +.. ..-++|+.+.....-.+..+|+.+|..+..+|+++.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99985110 000 111334444444455777889999999999999999999
Q ss_pred hhhHHHHHHHHhhhc
Q 003468 797 CHLENHCLSLELNLD 811 (817)
Q Consensus 797 ~~n~~~~~~~~~~~~ 811 (817)
++.+......++.+|
T Consensus 1095 q~qL~l~Vi~flSc~ 1109 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCF 1109 (1354)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988877766666554
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.2e-14 Score=121.32 Aligned_cols=125 Identities=26% Similarity=0.362 Sum_probs=107.6
Q ss_pred eEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhcc
Q 003468 621 LVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQ 700 (817)
Q Consensus 621 l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (817)
+...+.++---++-++++++|++|++. ++++++|||..-+....|+..|+..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--------------------------- 70 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--------------------------- 70 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce---------------------------
Confidence 346788888888999999999999999 9999999999999999999999853
Q ss_pred CCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe-CC-CccHHHHhhcCEEeccCCccHHHHH
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM-GI-AGTEVAKEASDMVLADDNFGTIVAA 777 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam-g~-~~~~~ak~~ad~vl~~~~~~~i~~~ 777 (817)
..+|+-..|+.|..+++.|+.+++.|+|+|||.||.+||+.||+||.. ++ +..+-+.++||+++.+ ...++++
T Consensus 71 --~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 71 --ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred --eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 457888999999999999999999999999999999999999999874 42 2344567999999875 4444444
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-14 Score=113.39 Aligned_cols=69 Identities=35% Similarity=0.567 Sum_probs=66.1
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHH
Q 003468 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVS 94 (817)
Q Consensus 26 ~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 94 (817)
||..+++++++.|+|+...||+.+||++|+++||+|+++.++++++|+.++++|.+|++++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 799999999999999999999999999999999999999999999999999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.1e-14 Score=118.66 Aligned_cols=88 Identities=35% Similarity=0.482 Sum_probs=69.2
Q ss_pred hHhcCCeeeecCCe--eEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEE
Q 003468 445 AVCNDAGVEQSGNH--YVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGV 522 (817)
Q Consensus 445 ~l~~~~~~~~~~~~--~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msv 522 (817)
++||++.+....+. ....|+|+|.||+.++.+.|.... ....+..+.+++.+||+|+||||+|
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~---------------~~~~~~~~~~~~~~pF~S~rK~msv 65 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID---------------IKEIRSKYKIVAEIPFDSERKRMSV 65 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc---------------HHHHHhhcceeEEEccCcccceeEE
Confidence 47998887654322 237899999999999999875322 1234567789999999999999999
Q ss_pred EEeecCCcEEEEEeCcchHHHhcccc
Q 003468 523 LVNSSSGNKKLLVKGAVENLLERSSF 548 (817)
Q Consensus 523 vv~~~~~~~~~~~KGa~e~il~~~~~ 548 (817)
+++ .++...+|+|||||.|+++|++
T Consensus 66 v~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 66 VVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 998 3335677999999999999985
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.5e-12 Score=131.03 Aligned_cols=155 Identities=25% Similarity=0.320 Sum_probs=106.3
Q ss_pred EEeccCCC-CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC------------CccccccccChhHHHHH
Q 003468 625 GMVGLRDP-PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA------------HEDISSQSITGKEFMDI 691 (817)
Q Consensus 625 G~~~~~d~-~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~------------~~~~~~~~~~~~~~~~~ 691 (817)
|.+.-.+. +.+.++++|+++++.|++++++|||+...+..+.+++++... ++.+....++.+....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444454 899999999999999999999999999999999999998531 11111111122111111
Q ss_pred H-------------------------------------------------------------------HHhHhhccCCce
Q 003468 692 H-------------------------------------------------------------------NQKNYLRQDGGL 704 (817)
Q Consensus 692 ~-------------------------------------------------------------------~~~~~~~~~~~~ 704 (817)
. ............
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 000000000111
Q ss_pred EEEe-------cCc--ccHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCc
Q 003468 705 LFSR-------AEP--RHKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNF 771 (817)
Q Consensus 705 v~~r-------~~p--~~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~ 771 (817)
.+.+ ..| .+|..-++.+.+ ..+.|++|||+.||++||+.|+.||||| ++.+.+|+.||+++.+++.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccc
Confidence 1111 222 356555555443 3457999999999999999999999999 5699999999999999999
Q ss_pred cHHHHHHHH
Q 003468 772 GTIVAAVGE 780 (817)
Q Consensus 772 ~~i~~~i~~ 780 (817)
+||.+++++
T Consensus 251 ~Gv~~~l~~ 259 (264)
T COG0561 251 DGVAEALEK 259 (264)
T ss_pred hHHHHHHHH
Confidence 999999864
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-11 Score=128.87 Aligned_cols=57 Identities=28% Similarity=0.352 Sum_probs=52.0
Q ss_pred cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 723 EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 723 ~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
...+.|++||||.||++||+.|++||||| |+.+.+|++||+|+.+++.+|+.++|++
T Consensus 210 i~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 210 IKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 33478999999999999999999999999 7888899999999999999999999853
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.3e-11 Score=129.03 Aligned_cols=55 Identities=24% Similarity=0.284 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcC--EEeccCCccHHHHHHH
Q 003468 724 DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASD--MVLADDNFGTIVAAVG 779 (817)
Q Consensus 724 ~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad--~vl~~~~~~~i~~~i~ 779 (817)
..+.|++||||.||++||+.|++||||| |+.+.+|++|| +|+.+++.+|+.++|+
T Consensus 205 ~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 205 SLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred CHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 3478999999999999999999999999 78888899988 7888999999999885
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.3e-12 Score=130.43 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=55.0
Q ss_pred cHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCE--EeccCCccHHHHHHH
Q 003468 713 HKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDM--VLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~--vl~~~~~~~i~~~i~ 779 (817)
.|..-++.+ +...+.|++||||.||++||+.|++||||| |+.+.+|++||+ ++.+++.+|+.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 455444444 334578999999999999999999999999 788889999996 777889999999985
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.7e-11 Score=122.71 Aligned_cols=152 Identities=26% Similarity=0.283 Sum_probs=102.0
Q ss_pred EEeccCCC-CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-----Cc---------cccccccChhHHH
Q 003468 625 GMVGLRDP-PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-----HE---------DISSQSITGKEFM 689 (817)
Q Consensus 625 G~~~~~d~-~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~~---------~~~~~~~~~~~~~ 689 (817)
|.+.-.|. +.+.+.++|+++++.|++++++|||+...+..+++.+|+... +. .+....+ +...
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~--~~~~ 89 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDI--EECE 89 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcch--HHHH
Confidence 33333444 789999999999999999999999999999999999998521 00 0000000 0010
Q ss_pred HH----HHH-------------------------------hHhhccCC--ce-----EEEecCcc--cHHHHHHHH----
Q 003468 690 DI----HNQ-------------------------------KNYLRQDG--GL-----LFSRAEPR--HKQEIVRLL---- 721 (817)
Q Consensus 690 ~~----~~~-------------------------------~~~~~~~~--~~-----v~~r~~p~--~K~~iv~~l---- 721 (817)
.+ .+. ...+.... .. .+....|. .|..-++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~ 169 (230)
T PRK01158 90 KAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELM 169 (230)
T ss_pred HHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHh
Confidence 10 000 00000000 00 01122222 355544444
Q ss_pred hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 722 KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 722 ~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+...+.+++|||+.||++|++.|++||||| ++.+.+|++||+|+.+++.+|+.++++
T Consensus 170 ~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 170 GIDPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCCHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 444578999999999999999999999999 788888999999999999999999885
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.7e-11 Score=136.48 Aligned_cols=54 Identities=30% Similarity=0.476 Sum_probs=50.8
Q ss_pred CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 725 GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 725 ~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.+.|++||||.||++||+.|++||||| |+.+.+|++||+|+.+++.+||..+|+
T Consensus 523 ~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 523 PDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 368999999999999999999999999 788888999999999999999999986
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-11 Score=97.20 Aligned_cols=62 Identities=39% Similarity=0.489 Sum_probs=57.6
Q ss_pred HhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 003468 37 KYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLA 98 (817)
Q Consensus 37 ~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 98 (817)
.|++++..||+.+|+++|+++||+|+++.++.+++|+.++++|.+|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888888999999999999999999999888999999999999999999999999998763
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.2e-11 Score=120.71 Aligned_cols=146 Identities=26% Similarity=0.305 Sum_probs=98.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-----C-------ccccccccChhHHHHH-------H
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-----H-------EDISSQSITGKEFMDI-------H 692 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~-------~~~~~~~~~~~~~~~~-------~ 692 (817)
.+.+++.++|++|++.|++++++||++...+..+++.+++... + ..+.........+... .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998521 0 0000000000000000 0
Q ss_pred ----------------------HHhHhhccCCc-------eEEEecCcccHHHHHHHHhc----CCCEEEEEcCCccCHH
Q 003468 693 ----------------------NQKNYLRQDGG-------LLFSRAEPRHKQEIVRLLKE----DGEVVAMTGDGVNDAP 739 (817)
Q Consensus 693 ----------------------~~~~~~~~~~~-------~v~~r~~p~~K~~iv~~l~~----~~~~v~~~GDg~ND~~ 739 (817)
.....+..... .+........|...++.+.+ ..+.+++|||+.||++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00000000000 01111223467666665533 3457999999999999
Q ss_pred HhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 740 ALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 740 ~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
|++.|++|+||+ ++.+.+|+.||+++.+++.+++.+++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999 78999999999999988888887753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.20 E-value=2e-10 Score=116.93 Aligned_cols=147 Identities=23% Similarity=0.244 Sum_probs=97.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-----Cc---------cccccccChhHHHHH-H----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-----HE---------DISSQSITGKEFMDI-H---- 692 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~~---------~~~~~~~~~~~~~~~-~---- 692 (817)
.+.+.+.++|+++++.|++++++|||+...+..+++.+|+... +. .+....+........ .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4789999999999999999999999999999999999996321 00 000000111000000 0
Q ss_pred ------------------------HHhH-hhccCCc-------eEEEecCc--ccHHHHHHHH----hcCCCEEEEEcCC
Q 003468 693 ------------------------NQKN-YLRQDGG-------LLFSRAEP--RHKQEIVRLL----KEDGEVVAMTGDG 734 (817)
Q Consensus 693 ------------------------~~~~-~~~~~~~-------~v~~r~~p--~~K~~iv~~l----~~~~~~v~~~GDg 734 (817)
+... ....... ..+....| ..|..-++.+ +...+.+++|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0000 0000000 00112222 3565555554 3345789999999
Q ss_pred ccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH----HHHHHH
Q 003468 735 VNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT----IVAAVG 779 (817)
Q Consensus 735 ~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~----i~~~i~ 779 (817)
.||++|++.|++|+||+ |+.+.+|+.||+|+.+++.++ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 688888999999999999999 666653
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.1e-10 Score=120.38 Aligned_cols=55 Identities=31% Similarity=0.458 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 724 DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 724 ~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..+.+++|||+.||++|++.|++||||| ++.+.+|+.||+++.+++.+|+..+|+
T Consensus 214 ~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 214 SMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 3468999999999999999999999999 567878999999999999999999985
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=119.58 Aligned_cols=147 Identities=21% Similarity=0.299 Sum_probs=100.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-------------CccccccccChhHHH--------
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-------------HEDISSQSITGKEFM-------- 689 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------~~~~~~~~~~~~~~~-------- 689 (817)
..+.+++.+++++++++|++++++|||....+..+.+++++... .+.+....++.+.+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 34789999999999999999999999999999999999997520 001111111111111
Q ss_pred -------------------------------------------------------------HHHHHhH-hh-------cc
Q 003468 690 -------------------------------------------------------------DIHNQKN-YL-------RQ 700 (817)
Q Consensus 690 -------------------------------------------------------------~~~~~~~-~~-------~~ 700 (817)
.+..... .+ ..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 1100000 00 00
Q ss_pred CCceEEEecCcccHHHHHHHHh----cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHH
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~----~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
....+..-.....|..-++.+. ...+.++++||+.||.+||+.|+.||||+ ++++..|..||+++.+.+.+++++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 0111112223356766555554 34578999999999999999999999999 788888999999999988899988
Q ss_pred HH
Q 003468 777 AV 778 (817)
Q Consensus 777 ~i 778 (817)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 75
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=114.24 Aligned_cols=147 Identities=16% Similarity=0.165 Sum_probs=96.5
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC------CCcccc--------------ccccChhHHHHHH
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG------AHEDIS--------------SQSITGKEFMDIH 692 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~------~~~~~~--------------~~~~~~~~~~~~~ 692 (817)
+.+.++++|++|+++|++++++|||....+..+++++|+.. ++..++ ...++.+.+..+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 56889999999999999999999999999999999999841 111110 1112222222220
Q ss_pred HHh--------------------------------H-----------------------hhccCCceE-----EEecCc-
Q 003468 693 NQK--------------------------------N-----------------------YLRQDGGLL-----FSRAEP- 711 (817)
Q Consensus 693 ~~~--------------------------------~-----------------------~~~~~~~~v-----~~r~~p- 711 (817)
+.. . .+......+ +....|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 000 0 000000000 111222
Q ss_pred -ccHHH----HHHHHhc---CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH-----HHhhcCEEeccCCccHHHHHH
Q 003468 712 -RHKQE----IVRLLKE---DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV-----AKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 -~~K~~----iv~~l~~---~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~-----ak~~ad~vl~~~~~~~i~~~i 778 (817)
..|.. +++.++. ..+.|++||||.||++||+.|++|||||++..+. .+..||+++...+-+|+.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 34543 4444555 5678999999999999999999999999655332 355899999999999999988
Q ss_pred H
Q 003468 779 G 779 (817)
Q Consensus 779 ~ 779 (817)
+
T Consensus 265 ~ 265 (271)
T PRK03669 265 D 265 (271)
T ss_pred H
Confidence 5
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.6e-09 Score=112.21 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=95.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC-----CC--------cc------ccccccChhHHHHHHH
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG-----AH--------ED------ISSQSITGKEFMDIHN 693 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~-----~~--------~~------~~~~~~~~~~~~~~~~ 693 (817)
..+.+.++|++|+++|++++++|||....+..+.+++|+.. ++ .. +....++.+.+..+.+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 45578999999999999999999999999999999999742 00 00 1111122222111100
Q ss_pred H-----------------------------------------------------hHhhccCCceE-----EEecCc--cc
Q 003468 694 Q-----------------------------------------------------KNYLRQDGGLL-----FSRAEP--RH 713 (817)
Q Consensus 694 ~-----------------------------------------------------~~~~~~~~~~v-----~~r~~p--~~ 713 (817)
. ...+......+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0 00000000000 111112 34
Q ss_pred HHHHH----HHHhcC--CCEEEEEcCCccCHHHhhhCCceEEeCCCcc--HHHHhh--c-CEEeccCCccHHHHHHHH
Q 003468 714 KQEIV----RLLKED--GEVVAMTGDGVNDAPALKLADIGVAMGIAGT--EVAKEA--S-DMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 714 K~~iv----~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~--~~ak~~--a-d~vl~~~~~~~i~~~i~~ 780 (817)
|..-+ +.++.. .+.++++||+.||.+||+.|++||||+|+.. +..|+. | ++|+.+++.+|+.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 54433 444444 6789999999999999999999999995432 456886 4 599999999999999863
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.3e-10 Score=117.95 Aligned_cols=127 Identities=18% Similarity=0.282 Sum_probs=96.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+...... . +...+..+-.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an----~---------------lei~dg~ltg~v~g 241 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN----E---------------LEIMDGKLTGNVLG 241 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe----E---------------EEEECCEEEeEecC
Confidence 5799999999999999999999999998888899999998531100 0 00001111111
Q ss_pred --cCcccHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 709 --AEPRHKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 709 --~~p~~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+....|...++.+.+ ..+.|+++|||.||++|++.||+|||| ++.+..++.||+++..+++++++.++-
T Consensus 242 ~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 242 DIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 123567766666543 357899999999999999999999999 467778999999999999998887763
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.1e-10 Score=106.32 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=87.6
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHH
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIV 718 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv 718 (817)
..|+.|+++|+++.++|+.+...+....+.+|+..... .....|+....++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~-----------------------------~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE-----------------------------GIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe-----------------------------cCCCCHHHHHHHH
Confidence 58999999999999999999999999999999952100 0012345556667
Q ss_pred HHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHH
Q 003468 719 RLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 719 ~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
+.++...+.+++|||+.||++|++.|++++||+ ++.+.++..|++|+..++-.+.+.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~v~ 148 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGAVR 148 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCHHH
Confidence 777666788999999999999999999999999 677888999999988766665543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.4e-10 Score=108.62 Aligned_cols=129 Identities=15% Similarity=0.122 Sum_probs=96.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE--ec
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--RA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~ 709 (817)
++.|++.+.|+.+++.| +++++||-....+..+++++|+...-.. ...+.+ ...+-. ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an--~l~~~~----------------~g~~tG~~~~ 128 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD----------------SDRVVGYQLR 128 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce--eeEEec----------------CCeeECeeec
Confidence 57999999999999985 9999999999999999999999531100 000000 000000 13
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHh
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~g 781 (817)
.++.|..+++.++..+..++++|||.||++|++.||+|||+. +.+..+++||=...-.+.+.+..++.++
T Consensus 129 ~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 577899999999888888999999999999999999999997 5555566666555555678888877654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.5e-09 Score=112.68 Aligned_cols=65 Identities=35% Similarity=0.408 Sum_probs=54.2
Q ss_pred cHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.|..-++.+.+ ..+.++++||+.||++|++.|++|+||+ ++.+.+|+.|++++.+++.+|+.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 46555555543 3468999999999999999999999999 67888899999999999999987753
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-09 Score=102.13 Aligned_cols=110 Identities=21% Similarity=0.231 Sum_probs=85.7
Q ss_pred HHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHH
Q 003468 640 AIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVR 719 (817)
Q Consensus 640 ~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 719 (817)
+|++|+++|+++.++|++....+..+++.+|+...- . .....|+-..++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~--------~---------------------~~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY--------Q---------------------GQSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE--------e---------------------cccchHHHHHHHHH
Confidence 899999999999999999999999999999985210 0 00122333344455
Q ss_pred HHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH-HHHHHH
Q 003468 720 LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT-IVAAVG 779 (817)
Q Consensus 720 ~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~-i~~~i~ 779 (817)
.++...+.++++||+.||++|++.|+++++|. ++.+..+..|++++..+.-.+ +.++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 55555678999999999999999999999999 677788999999998775444 666653
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.88 E-value=3e-08 Score=103.78 Aligned_cols=66 Identities=24% Similarity=0.257 Sum_probs=52.8
Q ss_pred cHHHHHHHHh----cCC-CEEEEEcCCccCHHHhhhCCceEEeCCCccHHHH----hhc-CEEe--ccCCccHHHHHHH
Q 003468 713 HKQEIVRLLK----EDG-EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAK----EAS-DMVL--ADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l~----~~~-~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak----~~a-d~vl--~~~~~~~i~~~i~ 779 (817)
.|..-++.+. ... +.|++|||+.||++|++.|++|+||+ |+.+.+| .+| +.+. ..++-+|+.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 5655454443 456 89999999999999999999999999 6777778 666 6777 5667889998885
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.2e-08 Score=99.29 Aligned_cols=119 Identities=21% Similarity=0.233 Sum_probs=86.9
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcccc---ccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDIS---SQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.... ...++ +..+.-
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt-----------------G~v~g~ 138 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT-----------------GRVVGP 138 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe-----------------ceeeee
Confidence 6789999999999999999999999999999999999999964211000 00011 112222
Q ss_pred ecCcccHHHHHHHHhc-C---CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEecc
Q 003468 708 RAEPRHKQEIVRLLKE-D---GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~-~---~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~ 768 (817)
.+..+.|...++.+.+ . .+.+.++|||.||.|||+.||.+||.+ +.+..+..|+.....
T Consensus 139 ~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 139 ICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred ecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcCh
Confidence 3445778777755443 2 356999999999999999999999996 445556666665543
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.1e-08 Score=101.47 Aligned_cols=125 Identities=22% Similarity=0.361 Sum_probs=91.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|+++|++++++|+.....+..+++.+|+.... ...+ ...+..+...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~----~~~~---------------~~~~~~~~~~~~~ 145 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF----ANRL---------------EVEDGKLTGLVEG 145 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE----eeEE---------------EEECCEEEEEecC
Confidence 58999999999999999999999999999999999999985311 0000 0000111111
Q ss_pred --cCcccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHH
Q 003468 709 --AEPRHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAA 777 (817)
Q Consensus 709 --~~p~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~ 777 (817)
..+..|..+++.+ +...+.++++||+.+|++|++.||++++++ +.+.++++||+++.++++..+...
T Consensus 146 ~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 146 PIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 1122355555543 333457999999999999999999999996 567788999999999988777653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.5e-08 Score=94.81 Aligned_cols=103 Identities=22% Similarity=0.250 Sum_probs=81.0
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHH--
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQE-- 716 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~-- 716 (817)
.+|+.|+++|+++.++||+....+..+++++|+... |. ..+.|..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------f~--g~~~k~~~l 101 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------YQ--GQSNKLIAF 101 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-------------------------------ec--CCCcHHHHH
Confidence 589999999999999999999999999999998521 11 1223433
Q ss_pred --HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHH
Q 003468 717 --IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIV 775 (817)
Q Consensus 717 --iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~ 775 (817)
+++.++-..+.++++||+.||++|++.|+++++++ ++.+..+..||+++..+.-.+.+
T Consensus 102 ~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~ 161 (183)
T PRK09484 102 SDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAV 161 (183)
T ss_pred HHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHH
Confidence 34444445678999999999999999999999998 67788899999999755444443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-07 Score=96.32 Aligned_cols=67 Identities=19% Similarity=0.213 Sum_probs=55.3
Q ss_pred cHHHHHHHHhcC----CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcC----EEeccCCccHHHHHHHH
Q 003468 713 HKQEIVRLLKED----GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASD----MVLADDNFGTIVAAVGE 780 (817)
Q Consensus 713 ~K~~iv~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad----~vl~~~~~~~i~~~i~~ 780 (817)
.|...++.+.++ .+.++++||+.||.+||+.|++||+|+ ++.+.+|+.|+ +|+..++-.|+.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 565555555332 347999999999999999999999999 67888899999 88888888999999853
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.59 E-value=5.7e-07 Score=92.77 Aligned_cols=150 Identities=15% Similarity=0.202 Sum_probs=95.4
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcc-------cccc--ccCh-------------hH
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHED-------ISSQ--SITG-------------KE 687 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-------~~~~--~~~~-------------~~ 687 (817)
..+..|...++++++++.|+.++++||+....++.+.+++++..++-. ++.. .... +.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 345789999999999999999999999999999999998887532100 0000 0000 00
Q ss_pred HHHH---------------------------------HHHhHhhccC--Cc-eEE-----EecCc--ccHHHHHHHHhc-
Q 003468 688 FMDI---------------------------------HNQKNYLRQD--GG-LLF-----SRAEP--RHKQEIVRLLKE- 723 (817)
Q Consensus 688 ~~~~---------------------------------~~~~~~~~~~--~~-~v~-----~r~~p--~~K~~iv~~l~~- 723 (817)
+..+ .+....+... .. .+. ....| ..|...++.+.+
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 0000000000 00 011 12233 456666665533
Q ss_pred ---CCCEEEEEcCCccCHHHhhh-CCceEEeCCCccHHHHhhcC-------EEeccCCccHHHHHHHH
Q 003468 724 ---DGEVVAMTGDGVNDAPALKL-ADIGVAMGIAGTEVAKEASD-------MVLADDNFGTIVAAVGE 780 (817)
Q Consensus 724 ---~~~~v~~~GDg~ND~~~l~~-A~vgiamg~~~~~~ak~~ad-------~vl~~~~~~~i~~~i~~ 780 (817)
..+.|+++||+.||++|++. ++.||||+ ++.+..|+.++ ++.....-+|+.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 35789999999999999998 67999999 57777676543 76667677888888853
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.5e-07 Score=84.24 Aligned_cols=115 Identities=21% Similarity=0.311 Sum_probs=87.9
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHH
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIV 718 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv 718 (817)
-.|+.+.+.||++.++||++...+..-|+.+|+..- | .--.+|....
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~-------------------------------~--qG~~dK~~a~ 88 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL-------------------------------Y--QGISDKLAAF 88 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee-------------------------------e--echHhHHHHH
Confidence 479999999999999999999999999999999521 1 1134565444
Q ss_pred HH----HhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH----HHHHHHHhHHHHHh
Q 003468 719 RL----LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT----IVAAVGEGRSIYNN 787 (817)
Q Consensus 719 ~~----l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~----i~~~i~~gR~~~~~ 787 (817)
+. ++-..+.|+++||..||.|+|+..++++|+. .+.+..++.||+|+....-.+ +.++|..++..++-
T Consensus 89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 89 EELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 43 4444678999999999999999999999999 677778999999998654433 33445555544443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.1e-07 Score=90.25 Aligned_cols=125 Identities=20% Similarity=0.308 Sum_probs=89.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE--ec
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--RA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~ 709 (817)
++.|++.++++.|+++ +++.++|+.....+..+.+++|+...-... .... .+..+.. ..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~--~~~~----------------~~~~i~~~~~~ 128 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHS--LEVD----------------EDGMITGYDLR 128 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcce--EEEC----------------CCCeEECcccc
Confidence 3579999999999999 999999999999999999999985310000 0000 0111111 12
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCE-EeccCCccHHHHHH
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDM-VLADDNFGTIVAAV 778 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~-vl~~~~~~~i~~~i 778 (817)
.|..|...++.++..+..++|+|||.||++|.+.|++|++.+ ...+.....+++ ++. ++..+...+
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 467888888888888899999999999999999999999987 444444455565 433 355555444
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.2e-06 Score=94.16 Aligned_cols=67 Identities=22% Similarity=0.273 Sum_probs=50.4
Q ss_pred ccHHHHHHHHhc-------CCCEEEEEcCCccCHHHhhhCC-ceEEeCCCccHHHHhhc--------CEEec-cCCccHH
Q 003468 712 RHKQEIVRLLKE-------DGEVVAMTGDGVNDAPALKLAD-IGVAMGIAGTEVAKEAS--------DMVLA-DDNFGTI 774 (817)
Q Consensus 712 ~~K~~iv~~l~~-------~~~~v~~~GDg~ND~~~l~~A~-vgiamg~~~~~~ak~~a--------d~vl~-~~~~~~i 774 (817)
..|..-++.+.+ ..+.|+++||+.||++||+.|+ .||||| |+.+..|+.+ +++.. +++-+||
T Consensus 174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 357666665533 3468999999999999999999 699999 6777767643 44433 5567889
Q ss_pred HHHHH
Q 003468 775 VAAVG 779 (817)
Q Consensus 775 ~~~i~ 779 (817)
.++|+
T Consensus 253 ~~al~ 257 (413)
T PLN02382 253 IQAIG 257 (413)
T ss_pred HHHHH
Confidence 98885
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.2e-06 Score=87.30 Aligned_cols=117 Identities=21% Similarity=0.279 Sum_probs=79.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+++|++.++++.|+++|++++++|+.....+..+++.+|+... ....+...+ ..... +. .+....|
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~----~~~~~~~~~-------~g~~~-p~--~~~~~~~ 145 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV----YSNELVFDE-------KGFIQ-PD--GIVRVTF 145 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE----EEEEEEEcC-------CCeEe-cc--eeeEEcc
Confidence 5799999999999999999999999999999999999997431 000000000 00000 00 1112335
Q ss_pred ccHHHHHHHHh----cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcC
Q 003468 712 RHKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASD 763 (817)
Q Consensus 712 ~~K~~iv~~l~----~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad 763 (817)
..|...++.+. ...+.++++||+.||++|++.||++++++ .+....+.++|
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 56665555443 23567999999999999999999999997 44444455554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.7e-07 Score=83.30 Aligned_cols=109 Identities=22% Similarity=0.358 Sum_probs=75.5
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++++.++.|++.|.+++++||--..-+..+|.++||+..+. +...+.-+..-+ +.--+.. -.-....
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~--yAN~l~fd~~Gk------~~gfd~~--~ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNI--YANELLFDKDGK------YLGFDTN--EPTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhh--hhheeeeccCCc------ccccccC--CccccCC
Confidence 68999999999999999999999999999999999999974211 000000000000 0000000 0012234
Q ss_pred cHHHHHHHHhcC--CCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 713 HKQEIVRLLKED--GEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 713 ~K~~iv~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.|..+++.+++. .+.++|+|||.||.+|+..|+.=++.|
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 688888888764 467899999999999999988888766
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.5e-06 Score=84.22 Aligned_cols=43 Identities=21% Similarity=0.332 Sum_probs=39.0
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
.+...+++.++|++|+++|++++++||+....+..+++++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999973
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.4e-06 Score=83.30 Aligned_cols=110 Identities=20% Similarity=0.148 Sum_probs=75.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccc--cccChhHHHHHHHHhHhhccCCceEE--
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISS--QSITGKEFMDIHNQKNYLRQDGGLLF-- 706 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~-- 706 (817)
-+++|++.+.++.|++.|++++++||.....+..+.+.++... .+.. ..+.+..+. ...+....+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n~~~~~~~~~~--------~~~p~~~~~~~ 137 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNEADFSNEYIH--------IDWPHPCDGTC 137 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEeceeEeeCCeeE--------EeCCCCCcccc
Confidence 4689999999999999999999999999998888888875421 1110 011111100 000000000
Q ss_pred EecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 707 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.......|..+++.++...+.++|+|||.||.+|++.||+.+|-+
T Consensus 138 ~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 138 QNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred ccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 001134688999988878888999999999999999999988754
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.5e-05 Score=80.76 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=36.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
..+.++++|+.|+++|++++++||++...+..+++.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.3e-05 Score=81.26 Aligned_cols=127 Identities=21% Similarity=0.326 Sum_probs=82.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|+++|+++.++||.....+..+++.+|+.... +....+. + .....+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~~~~~-------------~-~~~g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFANQIL-------------F-GDSGEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEEeEEE-------------E-cCCCcEECccCC
Confidence 37899999999999999999999999999999999999985210 1000000 0 000001111
Q ss_pred ---cCcccHHHHHHHHhcC--CCEEEEEcCCccCHHHhhh--CCceEEeCCCc-cHHHHhhcCEEeccCCccHHHH
Q 003468 709 ---AEPRHKQEIVRLLKED--GEVVAMTGDGVNDAPALKL--ADIGVAMGIAG-TEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 709 ---~~p~~K~~iv~~l~~~--~~~v~~~GDg~ND~~~l~~--A~vgiamg~~~-~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
..+..|...++.+... .+.++++||+.||+.|.+. ++++++.|... .+.....+|+++.+ +..+..
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 1123476666665443 3579999999999999888 45556655222 23345568998864 555443
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.9e-06 Score=82.17 Aligned_cols=92 Identities=25% Similarity=0.455 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc-c
Q 003468 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR-H 713 (817)
Q Consensus 635 ~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~-~ 713 (817)
+++.+.|+.++++|++++++||.....+..+++.+|+..... ....+. .........+.++. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v--~~~~~~--------------~~~~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV--IGNELF--------------DNGGGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE--EEEEEE--------------CTTCCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE--EEEeee--------------ecccceeeeeECCCCC
Confidence 888899999999999999999999999999999999964210 000000 00013345566655 4
Q ss_pred --HHHHHHHH------hcCCCEEEEEcCCccCHHHhh
Q 003468 714 --KQEIVRLL------KEDGEVVAMTGDGVNDAPALK 742 (817)
Q Consensus 714 --K~~iv~~l------~~~~~~v~~~GDg~ND~~~l~ 742 (817)
|...++.+ +.....++++|||.||++|||
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 456789999999999999996
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.15 E-value=1e-05 Score=81.68 Aligned_cols=107 Identities=19% Similarity=0.195 Sum_probs=73.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcccc--ccccChhHHHHHHHHhHhhccCCceE--EE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDIS--SQSITGKEFMDIHNQKNYLRQDGGLL--FS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v--~~ 707 (817)
+++|++.++++.|++.|+++.++|+-....+..+.+.+ +.. ..+. ...++++.+. ...+.... +.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~--------~~kp~p~~~~~~ 142 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYIT--------ITWPHPCDEHCQ 142 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeE--------EeccCCcccccc
Confidence 57999999999999999999999999999999999887 633 1111 0111111100 00000000 00
Q ss_pred ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 708 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
......|..+++.++.....++++|||.||++|.+.||+.+|
T Consensus 143 ~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 143 NHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 000134888999888888899999999999999999999776
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=2e-05 Score=81.72 Aligned_cols=140 Identities=16% Similarity=0.220 Sum_probs=84.3
Q ss_pred CCcHHHHHHHHHHHH-cCCeEEEECCCCHhhHHHHHHHhCCC--CCC--------ccccccccChhHHHHHHHHh-----
Q 003468 632 PPREEVRQAIEDCKA-AGIRVMVITGDNKNTAEAICREIGVF--GAH--------EDISSQSITGKEFMDIHNQK----- 695 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~--~~~--------~~~~~~~~~~~~~~~~~~~~----- 695 (817)
.+.+++.++|+.|++ .|+.++++|||+...+..+.+.+++. ..+ .......+..+....+....
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 467899999999998 79999999999999999888776642 110 00000111211111110000
Q ss_pred --------------------------------Hhhc-cCC------ceEEEecCc--ccHHHHHHHHhc----CCCEEEE
Q 003468 696 --------------------------------NYLR-QDG------GLLFSRAEP--RHKQEIVRLLKE----DGEVVAM 730 (817)
Q Consensus 696 --------------------------------~~~~-~~~------~~v~~r~~p--~~K~~iv~~l~~----~~~~v~~ 730 (817)
..+. ... ..-+....| .+|...++.+.+ ..+.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 000 001112222 466665555433 2468999
Q ss_pred EcCCccCHHHhhhC----CceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 731 TGDGVNDAPALKLA----DIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 731 ~GDg~ND~~~l~~A----~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+||+.||.+||+.+ ++||+||+ +. ..|++.+.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~-a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGT-GA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECC-CC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 99999994 43 347887764 55555554
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=81.50 Aligned_cols=127 Identities=22% Similarity=0.354 Sum_probs=93.8
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA 709 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 709 (817)
...+-|++++++..|+++|++..++|++....+..+.+..|+...-..+.. + ...-....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----~----------------~~~~~~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----G----------------DDVPPPKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc----C----------------CCCCCCCc
Confidence 446789999999999999999999999999999999999999653211100 0 00011123
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCC---ceEEeCCC-ccHHHHhhcCEEeccCCccHHHHHH
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD---IGVAMGIA-GTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~---vgiamg~~-~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.|.....+++.+....+.++||||..+|+.|-+.|+ |||..|.+ ........+|+++.+ +..+...+
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 455556677777766568999999999999999999 77888843 445666779999865 66655544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.7e-05 Score=87.00 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=40.4
Q ss_pred EEeccCCC-CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 625 GMVGLRDP-PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 625 G~~~~~d~-~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
|.+.-.|. ..+.+.++|++|+++|+.++++||+....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44444333 5578899999999999999999999999999999999973
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.7e-05 Score=80.53 Aligned_cols=128 Identities=23% Similarity=0.321 Sum_probs=89.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.++.|++.++++.|++.|++++++|+........+.+.+|+..... ..+..+. .-.....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~----------------~~~~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDS----------------LPNKKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCC----------------CCCCCcC
Confidence 3578999999999999999999999999999999999999853211 0110000 0001112
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEe--CCC-ccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAM--GIA-GTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giam--g~~-~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
|+--..+++.++...+.++++||+.||+.+.+.||+ +|.+ |.. ..+.....+++++. ++..+...+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 333355677777777889999999999999999999 4444 321 23444567888874 47777777644
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.01 E-value=2e-05 Score=77.45 Aligned_cols=114 Identities=21% Similarity=0.223 Sum_probs=75.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe-c
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR-A 709 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~ 709 (817)
-++.+++.+.++.|++.|++++++|+........+.+..|+...-..+ ++.+...+-.... .....+...+.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i----~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEI----YSNPASFDNDGRH-IVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEE----eccCceECCCCcE-EEecCCCCccCcCC
Confidence 368899999999999999999999999999999999999885321111 1100000000000 000000000000 1
Q ss_pred CcccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCceEE
Q 003468 710 EPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
....|..+++.++.. .+.++++|||.||++|.+.||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123588899998887 8899999999999999999988665
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.9e-05 Score=78.85 Aligned_cols=125 Identities=20% Similarity=0.298 Sum_probs=86.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+++++|+++|+++.++|+.....+....+.+|+...-.. .+.. ......+..|
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~----i~~~----------------~~~~~~KP~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH----VIGS----------------DEVPRPKPAP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee----EEec----------------CcCCCCCCCh
Confidence 6789999999999999999999999999999988899998531110 0000 0000112233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE---eCC-CccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA---MGI-AGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia---mg~-~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++-..+.+++|||+.+|+.+-+.||+... -|. ...+..+..+|+++.+ +..+..++
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 33355666676667889999999999999999999743 331 2233456789998754 55555544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.6e-05 Score=77.65 Aligned_cols=104 Identities=18% Similarity=0.229 Sum_probs=74.9
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE---
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF--- 706 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--- 706 (817)
..++++++.+.++.++++|++++++|+.....+..+++.+|+...- ...+. ...+...-
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~----~~~l~--------------~~~~g~~~g~~ 146 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAI----GTRLE--------------ESEDGIYTGNI 146 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceE----ecceE--------------EcCCCEEeCCc
Confidence 4568999999999999999999999999999999999999985310 00000 00000010
Q ss_pred --EecCcccHHHHHHHHh-cC---CCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 707 --SRAEPRHKQEIVRLLK-ED---GEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 707 --~r~~p~~K~~iv~~l~-~~---~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
..+.++.|...++.+. +. .+.++++||+.+|.+|++.|+.++++.
T Consensus 147 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 147 DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 1234567776665543 22 347899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=8.4e-05 Score=76.41 Aligned_cols=54 Identities=24% Similarity=0.281 Sum_probs=42.0
Q ss_pred ccHHHHHHHHhcCCCEEEEEcC----CccCHHHhhhC-CceEEeCCCccHHHHhhcCEEe
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGD----GVNDAPALKLA-DIGVAMGIAGTEVAKEASDMVL 766 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GD----g~ND~~~l~~A-~vgiamg~~~~~~ak~~ad~vl 766 (817)
.+|..-++.+.+..+.|++||| |.||++||+.| -.|++++ ++.+..|..|.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4577777777666789999999 99999999966 5667667 67888787776543
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.9e-05 Score=76.84 Aligned_cols=94 Identities=29% Similarity=0.403 Sum_probs=68.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE------
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF------ 706 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------ 706 (817)
++|++.+.++.+++.|++++++||.....+..+++.+|+... ....+..+ .+..+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~----~~~~~~~~--------------~~g~~~g~~~~~ 135 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV----FANRLEFD--------------DNGLLTGPIEGQ 135 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh----eeeeEEEC--------------CCCEEeCccCCc
Confidence 579999999999999999999999999999999999998531 00000000 000000
Q ss_pred EecCcccHHHHHHHHhcC----CCEEEEEcCCccCHHHhhhC
Q 003468 707 SRAEPRHKQEIVRLLKED----GEVVAMTGDGVNDAPALKLA 744 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~----~~~v~~~GDg~ND~~~l~~A 744 (817)
....+..|...++.+... .+.++++|||.||++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 123457788888776543 46799999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.5e-05 Score=71.02 Aligned_cols=118 Identities=23% Similarity=0.300 Sum_probs=77.2
Q ss_pred ccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 628 GLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 628 ~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
....++.+++.+.++.|+++|++++++||.....+...++.+|+......+ +......................+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPV----ITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhhe----eccchhhhhcccccccccccccccC
Confidence 445688999999999999999999999999999999999999874221111 1000000000000000001122233
Q ss_pred ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC-CceEE
Q 003468 708 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA-DIGVA 749 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A-~vgia 749 (817)
+..|+.+..+.+.+....+.++++||+.+|++|++.+ .-+|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 4556666777777777778899999999999999984 44443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.9e-05 Score=78.66 Aligned_cols=121 Identities=17% Similarity=0.259 Sum_probs=85.0
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE---
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--- 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--- 707 (817)
.++.|++.++++.|++.|++++++|+.+...+..+.+..|+.... +..+.+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--------------------------~~i~~~d~~ 153 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--------------------------RWIIGGDTL 153 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--------------------------eEEEecCCC
Confidence 367899999999999999999999999998888888888874311 111111
Q ss_pred ---ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEe--CCC-ccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 708 ---RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAM--GIA-GTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 708 ---r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iam--g~~-~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
...|+--..+++.++-..+.+++|||+.||+.|.+.||+. +++ |.. ..+..+..+|+++. ++..+..++.
T Consensus 154 ~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred CCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 1222223455666666678899999999999999999984 343 311 22234557899885 4777766543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00014 Score=74.01 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=38.8
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
+...+.+.++|++|+++||.++++||+.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346788999999999999999999999999999999999984
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=9.4e-05 Score=74.39 Aligned_cols=124 Identities=24% Similarity=0.283 Sum_probs=85.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|+++|+++.++|+.....+..+.+..|+...-.. ++..+ ..-..+..|+
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~----i~~~~----------------~~~~~Kp~p~ 142 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV----VITLD----------------DVEHAKPDPE 142 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE----EEecC----------------cCCCCCCCcH
Confidence 679999999999999999999999999999999999998542110 00000 0000122344
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce---EEeCCCccH-HHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---VAMGIAGTE-VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg---iamg~~~~~-~ak~~ad~vl~~~~~~~i~~~i 778 (817)
--.++++.++...+.+++|||+.+|+.+-+.||+- |+-|....+ .....+|+++.+ +..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 44566667766678899999999999999999995 333421222 334568888754 66666654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00029 Score=70.29 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=36.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
++.+++.+++++|++.|++++++||+....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 478999999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0001 Score=74.16 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=82.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+..+.+..|+...-.. ++..+ ..-..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----~~~~~----------------~~~~~Kp~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV----LIGGD----------------SLAQRKPHP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE----EEecC----------------CCCCCCCCh
Confidence 4788999999999999999999999999999999999998532110 00000 000011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE-e--CCCc-cHHHHhhcCEEeccCCccHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA-M--GIAG-TEVAKEASDMVLADDNFGTIV 775 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia-m--g~~~-~~~ak~~ad~vl~~~~~~~i~ 775 (817)
+-=..+++.++...+.++++||+.+|+.+.+.||+-.. + |... .+.....||+++.+ +..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~ 210 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELP 210 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHH
Confidence 33355666666667889999999999999999998754 3 3111 12334568888754 44443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00026 Score=79.04 Aligned_cols=99 Identities=21% Similarity=0.334 Sum_probs=73.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
|++|++.+.+++++++|++++++|+.+...+..+++.+|+... ++..+ . ..+..|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-------Vigsd---------------~---~~~~kg 126 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-------VFASD---------------G---TTNLKG 126 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-------EEeCC---------------C---ccccCC
Confidence 4789999999999999999999999999999999999997310 11000 0 013456
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV 757 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ 757 (817)
+.|...+...... +.+.++||+.+|.+|++.|+-.++++ .+...
T Consensus 127 ~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 127 AAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred chHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 6675544432222 23678899999999999999999998 44443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00058 Score=69.86 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=84.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+++|++.+.++.|++.|+++.++||-....+..+.+++|+......+.+..+.-. .+...-.-..|
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~--------------~dGvltG~~~P 186 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFD--------------EDGVLKGFKGP 186 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEEC--------------CCCeEeCCCCC
Confidence 5799999999999999999999999999999999999998643322211111000 00111111112
Q ss_pred ----ccHHHHH-----HHHh--cCCCEEEEEcCCccCHHHhhhC-C--ceEEeC--CCccH----HHHhhcCEEeccCCc
Q 003468 712 ----RHKQEIV-----RLLK--EDGEVVAMTGDGVNDAPALKLA-D--IGVAMG--IAGTE----VAKEASDMVLADDNF 771 (817)
Q Consensus 712 ----~~K~~iv-----~~l~--~~~~~v~~~GDg~ND~~~l~~A-~--vgiamg--~~~~~----~ak~~ad~vl~~~~~ 771 (817)
..|.+.+ +.++ .....|+++|||.||++|..-. . --+..| |...+ .-+++=|+|+.+|.-
T Consensus 187 ~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t 266 (277)
T TIGR01544 187 LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDET 266 (277)
T ss_pred cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCC
Confidence 3454432 2333 3457899999999999995433 1 112222 22222 356788999998876
Q ss_pred cHHHHHH
Q 003468 772 GTIVAAV 778 (817)
Q Consensus 772 ~~i~~~i 778 (817)
-.++.+|
T Consensus 267 ~~v~~~i 273 (277)
T TIGR01544 267 LEVANSI 273 (277)
T ss_pred chHHHHH
Confidence 6666665
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00026 Score=71.92 Aligned_cols=125 Identities=14% Similarity=0.088 Sum_probs=85.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.+...+..+.+..|+...-.. .+.++ ..-..+..|
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~----i~~~~----------------~~~~~KP~p 154 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAV----LIGGD----------------TLAERKPHP 154 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccE----EEecC----------------cCCCCCCCH
Confidence 4689999999999999999999999999888888888887532110 00000 000112334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE-e--CCC-cc-HHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA-M--GIA-GT-EVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia-m--g~~-~~-~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++...+.+++|||+.+|+.|-+.||+... + |.. .. ......+|+++.+ +..+...+
T Consensus 155 ~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~ 224 (229)
T PRK13226 155 LPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPA 224 (229)
T ss_pred HHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHh
Confidence 44466777787778899999999999999999998743 2 311 11 2234568998854 55555443
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00042 Score=71.33 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=82.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+....+.+|+...-. .++.+++ .-..+..|
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~iv~~~~----------------~~~~KP~p 167 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----AVIIGSE----------------CEHAKPHP 167 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc----EEEecCc----------------CCCCCCCh
Confidence 467899999999999999999999999999999999999854211 0111110 00112334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE-e--CCCccHHHHhhcCEEeccC
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA-M--GIAGTEVAKEASDMVLADD 769 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia-m--g~~~~~~ak~~ad~vl~~~ 769 (817)
+--...++.++...+.+++|||+.+|+.+-+.|++-.. + |....+.....+|+++.+-
T Consensus 168 ~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 168 DPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 44466677777777889999999999999999998633 2 3111223344688888653
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00023 Score=72.04 Aligned_cols=118 Identities=19% Similarity=0.197 Sum_probs=79.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
-++.|++.++++.|++.|++++++|+........+.+.+|+...-.. .+..+ ..-..+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----~~~~~----------------~~~~~Kp~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA----LASAE----------------KLPYSKPH 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE----EEEcc----------------cCCCCCCC
Confidence 35789999999999999999999999999999999999998542110 00000 00011223
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCcc---HHHHhhcCEEecc
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGT---EVAKEASDMVLAD 768 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~---~~ak~~ad~vl~~ 768 (817)
|+-=..+++.++...+.++++||+.||+.+.+.||+....-..+. +.-...||+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 333345556666666889999999999999999998854321221 1223457777643
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00065 Score=67.70 Aligned_cols=106 Identities=15% Similarity=0.133 Sum_probs=74.2
Q ss_pred CCcHHHHHHHH-HHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIE-DCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~-~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.+.|++.++|+ .++++|++++++|+-....+..+|+..++......+ ...+. ....+...-..|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i-~t~le-------------~~~gg~~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLI-ASQIE-------------RGNGGWVLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEE-EEEeE-------------EeCCceEcCccCC
Confidence 46899999995 788899999999999999999999997664321111 11000 0000111112356
Q ss_pred cccHHHHHHH-HhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 711 PRHKQEIVRL-LKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 711 p~~K~~iv~~-l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.++|.+-++. +....+...+-||+.||.|||+.||.+++++
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 6888776654 3434456679999999999999999999986
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00076 Score=69.14 Aligned_cols=69 Identities=26% Similarity=0.288 Sum_probs=44.6
Q ss_pred ccHHHHHHHHhcC----CCEEEEEcCCccCHHHhhhCCceEEeCCCccHH----HHhhc---C-EEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKED----GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV----AKEAS---D-MVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~----ak~~a---d-~vl~~~~~~~i~~~i~ 779 (817)
..|...+++++.+ .+.|+++||+.||.+||..++-||.+||+..+. ..... . +....+.-.||+++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5687777777654 357899999999999999999999999544441 22222 2 4444545567777765
Q ss_pred H
Q 003468 780 E 780 (817)
Q Consensus 780 ~ 780 (817)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00097 Score=66.76 Aligned_cols=106 Identities=15% Similarity=0.093 Sum_probs=74.8
Q ss_pred CCcHHHHHHH-HHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAI-EDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I-~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.+.|++.+.| +.+++.|++++++|+....-+..+++.+|+......+ ...+.. .......-..+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i-~t~l~~-------------~~tg~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI-ASQMQR-------------RYGGWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE-EEEEEE-------------EEccEECCccCC
Confidence 4589999999 6788899999999999999999999999963211111 111000 000111122356
Q ss_pred cccHHHHHHHH-hcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 711 PRHKQEIVRLL-KEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 711 p~~K~~iv~~l-~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.+.|..-++.. ........+-||+.||.|||+.|+.+++++
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 68887766644 444556779999999999999999999996
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00086 Score=69.71 Aligned_cols=119 Identities=13% Similarity=0.179 Sum_probs=82.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA-- 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~-- 709 (817)
++-|++.++++.|++.|+++.++|+.....+..+.+.+|+...-. ..+.+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--------------------------~vi~~~~~~ 195 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--------------------------VVQAGTPIL 195 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--------------------------EEEecCCCC
Confidence 467899999999999999999999999999999999999853211 0111111
Q ss_pred -CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE---eCCCccH-HHHhhcCEEeccCCccHHHHHH
Q 003468 710 -EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA---MGIAGTE-VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 710 -~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia---mg~~~~~-~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.|+--..+++.++...+.+++|||+.+|+.+-+.|++-.. -|.+..+ .....+|+++.+ +..+...+
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 1222233344455556789999999999999999998743 2311212 334568998854 66666654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00055 Score=69.17 Aligned_cols=123 Identities=22% Similarity=0.285 Sum_probs=81.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC--CCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF--GAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
.++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. ..-. ..+...+. -..+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~----~i~~~~~~----------------~~~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD----AVVCPSDV----------------AAGR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC----EEEcCCcC----------------CCCC
Confidence 368999999999999999999999999999999999999985 2111 11111000 0012
Q ss_pred cCcccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCceEE--eCCCcc---H-HHHhhcCEEeccCCccHHHH
Q 003468 709 AEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVA--MGIAGT---E-VAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgia--mg~~~~---~-~ak~~ad~vl~~~~~~~i~~ 776 (817)
..|+-=...++.+... .+.+++|||+.+|+.+-+.||+.++ +. .+. + .....+++++.+ +..+..
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~--~~~l~~ 217 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDS--VADLPA 217 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecC--HHHHHH
Confidence 2333334455556554 4789999999999999999999862 32 221 1 223457777643 444443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00098 Score=69.52 Aligned_cols=101 Identities=19% Similarity=0.169 Sum_probs=68.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++-|++.++++.|++.|+++.++|+.....+..+.+..|+.....+ .++..+ ..-..+..|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d---~i~~~~----------------~~~~~KP~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPD---HVVTTD----------------DVPAGRPYP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCce---EEEcCC----------------cCCCCCCCh
Confidence 4678999999999999999999999999988888887776432100 000000 000112233
Q ss_pred ccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCc---eEEeC
Q 003468 712 RHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADI---GVAMG 751 (817)
Q Consensus 712 ~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~v---giamg 751 (817)
+-=...++.++.. .+.+++|||+.+|+.+-+.||+ ||.-|
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 3334555566543 4679999999999999999997 45444
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0014 Score=67.64 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=80.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-. .++++++ .-.....|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~ii~~~d----------------~~~~KP~P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS----VVLAAED----------------VYRGKPDP 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc----EEEeccc----------------CCCCCCCH
Confidence 468999999999999999999999999999999999999853211 1111110 00112334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeCCCccHHHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg~~~~~~ak~~ad~vl~~ 768 (817)
+-=...++.++-..+.+++|||+.+|+.+-+.||+-+ ++...........+|+++.+
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 4445667777777788999999999999999999853 33212222223357887654
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0011 Score=68.67 Aligned_cols=97 Identities=20% Similarity=0.195 Sum_probs=69.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+..... ..++..++ .-..+..|
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~----------------~~~~KP~p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDD----------------VPAGRPAP 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEcccc----------------CCCCCCCH
Confidence 357899999999999999999999999999999999988854210 01111110 00112334
Q ss_pred ccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCce
Q 003468 712 RHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 712 ~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
+--...++.+... .+.+++|||+.+|+.+-+.||+-
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 4445556666653 57799999999999999999976
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0043 Score=74.24 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=85.8
Q ss_pred CCcHHHHHHHHHHHH-cCCeEEEECCCCHhhHHHHHHHhCCC--C--------CCccccccccCh---------------
Q 003468 632 PPREEVRQAIEDCKA-AGIRVMVITGDNKNTAEAICREIGVF--G--------AHEDISSQSITG--------------- 685 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~--~--------~~~~~~~~~~~~--------------- 685 (817)
.+.+++.+++++|.+ .|+.|+++||+...........+++. . .+..+.......
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 59999999999999888776655531 0 000100000000
Q ss_pred -----------------------hHHHH-----HHHHhHh-hcc-------CCceEEEecCcccHHHHHHHHhcC--CCE
Q 003468 686 -----------------------KEFMD-----IHNQKNY-LRQ-------DGGLLFSRAEPRHKQEIVRLLKED--GEV 727 (817)
Q Consensus 686 -----------------------~~~~~-----~~~~~~~-~~~-------~~~~v~~r~~p~~K~~iv~~l~~~--~~~ 727 (817)
.++.. +...... +.. .+..+-.+....+|...++.+.+. .+.
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 01100 0000001 000 111122223335788777777653 468
Q ss_pred EEEEcCCccCHHHhhhC---CceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 728 VAMTGDGVNDAPALKLA---DIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 728 v~~~GDg~ND~~~l~~A---~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
++++||+.||.+||+.+ +++|+||+ + +.+|++.+.+. +.+...+
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGP-G----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECC-C----CCcceEeCCCH--HHHHHHH
Confidence 99999999999999996 69999994 3 56799999864 4555555
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0013 Score=66.34 Aligned_cols=116 Identities=15% Similarity=0.107 Sum_probs=77.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+....+..|+... ...++.++. -.....|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-----~~i~~~~~~----------------~~~KP~p 141 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-----EVFVTAERV----------------KRGKPEP 141 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-----cEEEEHHHh----------------cCCCCCc
Confidence 4689999999999999999999999887776666666776321 011111110 0012334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCccHHHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~~~ak~~ad~vl~~ 768 (817)
+--....+.++-..+.+++|||+.+|+.+-+.||+- |++...........+|+++.+
T Consensus 142 ~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 142 DAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 444555666777778999999999999999999985 555422222223457777654
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0016 Score=65.61 Aligned_cols=87 Identities=21% Similarity=0.338 Sum_probs=62.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCC----HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDN----KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
.+.++++++++.+++.|+++.++|++. ..++..+.+..|+...+. ...+++
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~-------------------------f~vil~ 168 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM-------------------------NPVIFA 168 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc-------------------------eeEEEc
Confidence 367889999999999999999999975 568888888899942210 011222
Q ss_pred ecCc--ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 708 RAEP--RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 708 r~~p--~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
..++ ..|...++ +.+ .++++||..+|..+-+.||+-
T Consensus 169 gd~~~K~~K~~~l~---~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 169 GDKPGQYTKTQWLK---KKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCCCHHHHHH---hcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 2221 34554443 333 489999999999999999986
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0011 Score=66.79 Aligned_cols=83 Identities=20% Similarity=0.352 Sum_probs=60.4
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCC----CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGD----NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+.+.++++++.++++|+++.++|++ ...++..+.+.+|+.... ..+++.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---------------------------~~i~~~ 167 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---------------------------PVIFAG 167 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---------------------------eEEECC
Confidence 4455999999999999999999998 667899999999995321 111111
Q ss_pred -c----CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 709 -A----EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 709 -~----~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
. .| +|.. .+++.+ .++++||..||+.+-+.|++-
T Consensus 168 d~~~~~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 168 DKPGQYQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCCCCCCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 1 12 2332 334433 479999999999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0014 Score=64.88 Aligned_cols=93 Identities=18% Similarity=0.116 Sum_probs=67.6
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
+++.+.+.++++.|++.|+++.++||.....+..+.+.+|+...-.. .+.. .. +..+..
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~----~~~~----------------~~-~~~KP~ 163 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPV----QIWM----------------ED-CPPKPN 163 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCE----EEee----------------cC-CCCCcC
Confidence 44566679999999999999999999999999999999998532110 0000 00 011334
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 744 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A 744 (817)
|+.-..+++.++...+.+++|||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5554666777777778899999999999987654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0023 Score=68.81 Aligned_cols=120 Identities=15% Similarity=0.178 Sum_probs=82.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+...-.. ++.+++ .......|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~----Iv~sdd----------------v~~~KP~P 275 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV----IVAAED----------------VYRGKPDP 275 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE----EEecCc----------------CCCCCCCH
Confidence 3679999999999999999999999999999999999998532111 111000 00011233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeCCCccHH-HHhhcCEEeccCCccHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMGIAGTEV-AKEASDMVLADDNFGTI 774 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg~~~~~~-ak~~ad~vl~~~~~~~i 774 (817)
+-=...++.++...+.+++|||..+|+.+-+.|++-. ++. .+.+. -...||+++.+ +..+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHH
Confidence 3345567777777889999999999999999999973 333 32222 12358888754 5544
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.002 Score=63.88 Aligned_cols=98 Identities=14% Similarity=0.221 Sum_probs=70.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+++++|+++|++++++|+-+........+.+|+...-. .++..++. -.....|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~----------------~~~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD----AVLSADAV----------------RAYKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh----eeEehhhc----------------CCCCCCH
Confidence 467999999999999999999999999998888889999743111 11111100 0011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
+-=..+.+.++...+.+++|||+.+|+.+-+.||+-..
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 32355666777677889999999999999999998743
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.004 Score=60.63 Aligned_cols=126 Identities=22% Similarity=0.188 Sum_probs=72.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHh---------------hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHh
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKN---------------TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY 697 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (817)
+.|++.+++++|++.|+++.++|..+.. ....+.+..|+... ..+.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-~i~~~~~~~~------------ 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-GIYYCPHHPE------------ 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-eEEECCCCCC------------
Confidence 5799999999999999999999987631 11122333443100 0000000000
Q ss_pred hccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeCCCcc--H-HHHhhc--CEEeccCCc
Q 003468 698 LRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMGIAGT--E-VAKEAS--DMVLADDNF 771 (817)
Q Consensus 698 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg~~~~--~-~ak~~a--d~vl~~~~~ 771 (817)
...-..+..|+--..+++.++...+.+++|||+.+|+.+-+.||+.. .+. .|. + .....+ |+++.+ +
T Consensus 97 ----~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~--l 169 (181)
T PRK08942 97 ----DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS--L 169 (181)
T ss_pred ----CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--H
Confidence 00001123344445666777777789999999999999999999852 232 221 1 122335 777643 5
Q ss_pred cHHHHHH
Q 003468 772 GTIVAAV 778 (817)
Q Consensus 772 ~~i~~~i 778 (817)
..+...+
T Consensus 170 ~el~~~l 176 (181)
T PRK08942 170 ADLPQAL 176 (181)
T ss_pred HHHHHHH
Confidence 5555544
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0083 Score=57.39 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 636 EVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 636 ~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
.+.+.+.+|+++|++|+++|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4568999999999999999999999999999999985
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0038 Score=57.25 Aligned_cols=93 Identities=23% Similarity=0.246 Sum_probs=66.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCC--------HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDN--------KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGG 703 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (817)
++.|++.++++.|+++|++++++|+.. ......+.+.+|+.... .... .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~-----------------~- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-----LYAC-----------------P- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-----EEEC-----------------C-
Confidence 568999999999999999999999998 67778888888874210 0000 0
Q ss_pred eEEEecCcccHHHHHHHH-hcCCCEEEEEcC-CccCHHHhhhCCceE
Q 003468 704 LLFSRAEPRHKQEIVRLL-KEDGEVVAMTGD-GVNDAPALKLADIGV 748 (817)
Q Consensus 704 ~v~~r~~p~~K~~iv~~l-~~~~~~v~~~GD-g~ND~~~l~~A~vgi 748 (817)
-..+..|+-=..+++.+ +-..+.+++||| ..+|+.+-+.|++-.
T Consensus 82 -~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 -HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred -CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 00122233335666677 366788999999 699999999998753
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0019 Score=59.78 Aligned_cols=106 Identities=18% Similarity=0.290 Sum_probs=74.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC----CCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG----VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
.++|+-++.++.+++.+++++++|+....-...+-+.++ +...+ ..+.+....... ...+++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~id------i~sn~~~ih~dg-------~h~i~~~ 139 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCID------IVSNNDYIHIDG-------QHSIKYT 139 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeE------EeecCceEcCCC-------ceeeecC
Confidence 378999999999999999999999998888888887766 21100 000000000000 0112222
Q ss_pred ecC--cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 708 RAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 708 r~~--p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
..+ ..+|...|+.+.+..+.+.++|||..|+++-+.+|+=.|-
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 222 3678999999999999999999999999999999988853
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.003 Score=63.79 Aligned_cols=94 Identities=18% Similarity=0.126 Sum_probs=69.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|+++|+++.++|+.....+....+..|+...- +..+.+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--------------------------d~iv~s~~~~ 146 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--------------------------DLLLSTHTFG 146 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--------------------------CEEEEeeeCC
Confidence 56899999999999999999999999888888877888874311 1112211
Q ss_pred -cC--cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce--EEeC
Q 003468 709 -AE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG--VAMG 751 (817)
Q Consensus 709 -~~--p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg--iamg 751 (817)
.. |+-=..+.+.++-..+.+++|||+.+|+.+-+.||+. +++.
T Consensus 147 ~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 147 YPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred CCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 12 2323445566666678899999999999999999996 4444
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0063 Score=57.44 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=64.4
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH---HHHHHh---C--CCCCCccccccccChhHHHHHHHHhHhhccC
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE---AICREI---G--VFGAHEDISSQSITGKEFMDIHNQKNYLRQD 701 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (817)
+|.+.+++.+++++++++|++++++||+....+. ....++ | +.. . .+ ....+..+....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g-~l--i~~~g~~~~~~~--------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-G-PV--LLSPDRLFAALH--------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-c-eE--EEcCCcchhhhh---------
Confidence 5788999999999999999999999999998874 455552 2 321 0 00 000111110000
Q ss_pred CceEEEecCc-ccHHHHHHHHhc-----CCCEEEEEcCCccCHHHhhhCCce
Q 003468 702 GGLLFSRAEP-RHKQEIVRLLKE-----DGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 702 ~~~v~~r~~p-~~K~~iv~~l~~-----~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
+. +. ...| +.|...++.+.+ ....++.+|++.+|+.+-++++|.
T Consensus 92 ~e-~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 RE-VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred cc-cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 00 11 1223 337666666655 345677899999999998887764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0044 Score=65.92 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=76.2
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 629 LRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 629 ~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
..+++.+++.++++.|++.|++++++||+....+..+.+.+|+..... ......+. ...++..... .+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f---~~i~~~~~------~~~~~~~~~~---~k 251 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF---DDLIGRPP------DMHFQREQGD---KR 251 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch---hhhhCCcc------hhhhcccCCC---CC
Confidence 567899999999999999999999999999999999999998853100 00000000 0000100000 13
Q ss_pred cCcccHHHHHHHHhc-CCCEEEEEcCCccCHHHhhhCCceE
Q 003468 709 AEPRHKQEIVRLLKE-DGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~-~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
..|+-+...++.+.. ....++||||..+|+.+-+.||+-+
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 456677777776655 4578999999999999999999884
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0038 Score=60.18 Aligned_cols=98 Identities=13% Similarity=0.041 Sum_probs=62.2
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHh--------hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCce
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKN--------TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGL 704 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (817)
+-|++++++++|++.|+++.++|+.... ......+..|+... +......+ ...
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~----------------~~~ 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI---YLCPHKHG----------------DGC 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE---EECcCCCC----------------CCC
Confidence 6799999999999999999999987642 12222334444210 00000000 000
Q ss_pred EEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 705 LFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 705 v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
-..+..|+-=..+++.++...+.+++|||..+|+.+-+.|++-..
T Consensus 90 ~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 90 ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 011233444456666676667889999999999999999998754
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0035 Score=63.31 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=70.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|++++++|+-....+....+.+|+...-.. ++..+ ..-..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~----i~~~~----------------~~~~~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDA----VITSE----------------EEGVEKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccE----EEEec----------------cCCCCCCCH
Confidence 4789999999999999999999999998888888888888432110 00000 000012223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce-EEeC
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG-VAMG 751 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg-iamg 751 (817)
+--..+++.+....+.+++|||.. +|+.+-+.||+- |.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 333455666666667899999998 999999999985 4444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0076 Score=63.32 Aligned_cols=119 Identities=18% Similarity=0.202 Sum_probs=76.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+........+.+..+.......+ ..+.+++ .-..+..|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~----------------~~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGL--DVFAGDD----------------VPKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCce--EEEeccc----------------cCCCCCCH
Confidence 47899999999999999999999999888887776655322110000 0001100 00012233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccH--HHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTE--VAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~--~ak~~ad~vl~~ 768 (817)
+-=..+++.++-..+.+++|||+.+|+.+-+.||+.+..-..+.. .....+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 344556677776778899999999999999999988544323321 112357888754
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0023 Score=61.68 Aligned_cols=91 Identities=23% Similarity=0.350 Sum_probs=70.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|++.|++++++|+.+........+.+|+...- +..+.+.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f--------------------------~~i~~~~~~~ 130 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF--------------------------DEIISSDDVG 130 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC--------------------------SEEEEGGGSS
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc--------------------------ccccccchhh
Confidence 56899999999999999999999999999999999999985211 1111111
Q ss_pred ---cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 709 ---AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 709 ---~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
..|+-=..+++.++-..+.+++|||+..|+.+-+.||+--
T Consensus 131 ~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 131 SRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp SSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred hhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 1223335667777777889999999999999999999764
|
... |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0085 Score=60.63 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=77.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|+ +|+++.++|......+....+..|+...- +..+.+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--------------------------d~v~~~~~~~ 147 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--------------------------DLLVISEQVG 147 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--------------------------CEEEEECccC
Confidence 36799999999999 68999999999888888888888874311 1222222
Q ss_pred ---cCcccHHHHHHHHhcC-CCEEEEEcCCc-cCHHHhhhCCce-EEeCCCccH-HHHhhcCEEeccCCccHHHHHH
Q 003468 709 ---AEPRHKQEIVRLLKED-GEVVAMTGDGV-NDAPALKLADIG-VAMGIAGTE-VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 709 ---~~p~~K~~iv~~l~~~-~~~v~~~GDg~-ND~~~l~~A~vg-iamg~~~~~-~ak~~ad~vl~~~~~~~i~~~i 778 (817)
..|+-=..+++.++.. .+.+++|||+. +|+.+-+.||+- |.+...+.. .....+|+++.+ +..+...+
T Consensus 148 ~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 148 VAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred CCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 2222224455666533 36799999998 799999999986 333311211 111246777644 66555544
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0096 Score=56.96 Aligned_cols=112 Identities=12% Similarity=0.047 Sum_probs=73.3
Q ss_pred EEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCC-CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccC
Q 003468 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGD-NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQD 701 (817)
Q Consensus 623 ~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (817)
.....+-+-++.|++.++++.|+++|+++.++|+. ....+..+...+|+........ ....-
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~-----------------~~~~F 98 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVP-----------------MHSLF 98 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCccc-----------------HHHhc
Confidence 44444455568899999999999999999999977 8888888889898742110000 00000
Q ss_pred CceEEEecCcccH--HHHHHHHh------cCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 702 GGLLFSRAEPRHK--QEIVRLLK------EDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 702 ~~~v~~r~~p~~K--~~iv~~l~------~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
+..+.+...+..| ..+.+.+. -..+.+++|||...|+.+-+.|++-++.-
T Consensus 99 d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 99 DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 1122222211122 23445443 33578999999999999999999976543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0066 Score=59.13 Aligned_cols=89 Identities=19% Similarity=0.287 Sum_probs=65.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS---- 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---- 707 (817)
++.|++.++++.|++.|++++++|+..... ..+..++|+...- ...+++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--------------------------~~i~~~~~~~ 137 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--------------------------DVVIFSGDVG 137 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--------------------------CEEEEcCCCC
Confidence 578999999999999999999999988877 5555557874311 111211
Q ss_pred --ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 708 --RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 708 --r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
...|+--..+.+.++...+.+++|||...|+.+-+.+|+-
T Consensus 138 ~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 138 RGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred CCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 1223333556666666678999999999999999999884
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0032 Score=61.50 Aligned_cols=95 Identities=13% Similarity=0.169 Sum_probs=64.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+... +....+.+|+...-. ..+...+ .-..+..|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~----~~~~~~~----------------~~~~kp~p 144 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD----AIVDPAE----------------IKKGKPDP 144 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc----EEEehhh----------------cCCCCCCh
Confidence 5789999999999999999999997543 456677788743211 1111110 00112333
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
+-=....+.++-..+.+++|||+.+|+.+-+.||+-.
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 3334556666655678999999999999999999863
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0038 Score=61.01 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=64.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+...-.. ++...+ .-..+..|
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~----v~~~~~----------------~~~~kp~~ 145 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA----IVDADE----------------VKEGKPHP 145 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE----eeehhh----------------CCCCCCCh
Confidence 57899999999999999999999987 556777788887431110 000000 00011222
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
+--..+.+.++...+.+++|||+.+|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 2224455555555678999999999999999999863
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.014 Score=65.94 Aligned_cols=123 Identities=14% Similarity=0.123 Sum_probs=80.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-.. .+.+++ +.....|
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~----i~~~d~-----------------v~~~~kP 388 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE----TFSIEQ-----------------INSLNKS 388 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce----eEecCC-----------------CCCCCCc
Confidence 5789999999999999999999999999999999999998532111 111100 0011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCC-CccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGI-AGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~-~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+--...++.+ ..+.+++|||+.+|+.+-+.|++- |++.. .+.+.....+|+++.+ +..+...+.
T Consensus 389 ~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 454 (459)
T PRK06698 389 DLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILS 454 (459)
T ss_pred HHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHH
Confidence 3223333333 246799999999999999999985 44421 1222223457888754 666666553
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.012 Score=57.08 Aligned_cols=124 Identities=19% Similarity=0.111 Sum_probs=66.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHh----hH-----------HHHHHHhCCCCCCccccccccChhHHHHHHHHhHh
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKN----TA-----------EAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY 697 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~----~a-----------~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (817)
+.|++.+++++|+++|+++.++|.-+.. .+ ..+....|+.-. .+........+.. .
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~~~~~~~~~-------~ 97 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD--GIYYCPHHPEGVE-------E 97 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc--EEEECCCCCcccc-------c
Confidence 5789999999999999999999987641 11 122222232200 0000000000000 0
Q ss_pred hccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE--EeCCCcc---HHHHhhcCEEecc
Q 003468 698 LRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV--AMGIAGT---EVAKEASDMVLAD 768 (817)
Q Consensus 698 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi--amg~~~~---~~ak~~ad~vl~~ 768 (817)
+. ...-..+..|+-=....+.++-..+.++||||..+|+.+-+.|++.. .+. .|. ......||+++.+
T Consensus 98 ~~--~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 98 FR--QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS 170 (176)
T ss_pred cc--CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc
Confidence 00 00000112233334455556656788999999999999999999853 332 232 1222347888754
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.007 Score=61.21 Aligned_cols=95 Identities=17% Similarity=0.186 Sum_probs=67.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+++++|++. ++++++|+-....+..+.+.+|+...-.. ++.. ...-..+..|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~----i~~~----------------~~~~~~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDD----IFVS----------------EDAGIQKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCE----EEEc----------------CccCCCCCCH
Confidence 4689999999999999 99999999999998888999988532110 0000 0000011223
Q ss_pred ccHHHHHHHH-hcCCCEEEEEcCCc-cCHHHhhhCCce
Q 003468 712 RHKQEIVRLL-KEDGEVVAMTGDGV-NDAPALKLADIG 747 (817)
Q Consensus 712 ~~K~~iv~~l-~~~~~~v~~~GDg~-ND~~~l~~A~vg 747 (817)
+-=...++.+ .-..+.+++|||+. +|+.+-+.+|+-
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 3335566666 65667899999998 899999999974
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0095 Score=65.24 Aligned_cols=116 Identities=16% Similarity=0.148 Sum_probs=76.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHH-HhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR-EIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++++.|++.|+++.++|+.....+....+ ..|+...-. .++.+++ .-.....
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd----~ii~~d~----------------v~~~KP~ 152 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS----VIVGGDE----------------VEKGKPS 152 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC----EEEehhh----------------cCCCCCC
Confidence 367999999999999999999999998888776655 567632110 1111110 0011223
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeCCCcc--HHHHhhcCEEecc
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMGIAGT--EVAKEASDMVLAD 768 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg~~~~--~~ak~~ad~vl~~ 768 (817)
|+-=..+++.++-..+.+++|||+.+|+.+-+.||+.. ++. .+. ......+|.++.+
T Consensus 153 p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 153 PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC
Confidence 33345566667666788999999999999999999873 343 222 2223456666543
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.023 Score=54.52 Aligned_cols=135 Identities=21% Similarity=0.260 Sum_probs=84.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcc-----ccc------------------cccChhHH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHED-----ISS------------------QSITGKEF 688 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-----~~~------------------~~~~~~~~ 688 (817)
.+-|++.++++.+.+.= ..+++|-.-..-+..+|..+|+...+.. +.. ..++|+++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 35689999999998864 4455555555667889999998542211 111 11222221
Q ss_pred H-HHHHHhHhhccCCceEEEecCcc---------------cHHHHHHHHhcC---CCEEEEEcCCccCHHHhhhCC-ce-
Q 003468 689 M-DIHNQKNYLRQDGGLLFSRAEPR---------------HKQEIVRLLKED---GEVVAMTGDGVNDAPALKLAD-IG- 747 (817)
Q Consensus 689 ~-~~~~~~~~~~~~~~~v~~r~~p~---------------~K~~iv~~l~~~---~~~v~~~GDg~ND~~~l~~A~-vg- 747 (817)
. ++. .+|.|..|. .|.++++.+... ....+++||+..|..||+.+. -|
T Consensus 162 fe~lD-----------e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGg 230 (315)
T COG4030 162 FEKLD-----------ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGG 230 (315)
T ss_pred HHHHH-----------HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCc
Confidence 1 111 133444443 344555544332 234688999999999999873 33
Q ss_pred EEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 748 VAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 748 iamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+|+.-||.+-+..-||+.+.+.+.......|
T Consensus 231 lAvaFNGNeYal~eAdVAvisp~~~a~~pvi 261 (315)
T COG4030 231 LAVAFNGNEYALKEADVAVISPTAMAEAPVI 261 (315)
T ss_pred eEEEecCCcccccccceEEeccchhhhhHHH
Confidence 5555578888888899999888877777665
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.011 Score=56.76 Aligned_cols=88 Identities=18% Similarity=0.195 Sum_probs=64.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCC-HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDN-KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.+-+++.++++.|++.|++++++|+.+ ...+..+.+.+|+.... . .....
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~--------------------------~---~~KP~ 93 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP--------------------------H---AVKPP 93 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc--------------------------C---CCCCC
Confidence 567999999999999999999999988 56677777777763100 0 01122
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceE
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGV 748 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgi 748 (817)
|+-=..+++.++...+.+++|||.. .|+.+-+.|++-.
T Consensus 94 p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 94 GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 3333445555655677899999998 7999999999853
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.011 Score=56.08 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=61.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCC---------------HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHh
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDN---------------KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY 697 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (817)
+-|++.+++++|+++|++++++|... ...+..+.+.+|+.- ...+.+.....+
T Consensus 30 ~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-d~ii~~~~~~~~----------- 97 (161)
T TIGR01261 30 FEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF-DDVLICPHFPDD----------- 97 (161)
T ss_pred ECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce-eEEEECCCCCCC-----------
Confidence 56899999999999999999999752 334555666666631 000000000000
Q ss_pred hccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 698 LRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 698 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
..-+....|+-=..+++.++...+.+++|||+.+|+.+-+.|++-..
T Consensus 98 -----~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 -----NCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00000111222234445555456789999999999999999999854
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.014 Score=58.06 Aligned_cols=95 Identities=16% Similarity=0.185 Sum_probs=63.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
.+-|++.++++.|++.|+++.++|+-... .....+.+|+...-.. ++.. ...-..+..|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~----i~~s----------------~~~~~~KP~~ 163 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDF----VVTS----------------YEVGAEKPDP 163 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcce----EEee----------------cccCCCCCCH
Confidence 56789999999999999999999986553 4666777777421110 0000 0000011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG 747 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg 747 (817)
+-=..+++.++...+.+++|||+. +|+.+-+.||+-
T Consensus 164 ~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 164 KIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 333455666666678899999997 899999998864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.041 Score=66.20 Aligned_cols=37 Identities=8% Similarity=0.191 Sum_probs=32.1
Q ss_pred CCcHHHHHHHHHH-HHcCCeEEEECCCCHhhHHHHHHH
Q 003468 632 PPREEVRQAIEDC-KAAGIRVMVITGDNKNTAEAICRE 668 (817)
Q Consensus 632 ~~r~~~~~~I~~l-~~~gi~v~~~TGd~~~~a~~ia~~ 668 (817)
.+.+++.+++++| ++.|+.|+++||+...+.......
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5778999999997 778999999999999998876644
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.012 Score=55.04 Aligned_cols=101 Identities=20% Similarity=0.221 Sum_probs=62.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCH---------------hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNK---------------NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKN 696 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (817)
++.|++.++++.|++.|+++.++|.... ..+..+.+.+|+.... .+.......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~----------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-VLFCPHHPA----------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-EEECCCCCC-----------
Confidence 3689999999999999999999998763 3445566677764110 000000000
Q ss_pred hhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 697 YLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 697 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
...-.....|+-=..+++.++...+.+++|||...|+.+-+.+++-..
T Consensus 95 -----~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 95 -----DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 000000122222244555566566789999999999999999998643
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.034 Score=57.04 Aligned_cols=87 Identities=14% Similarity=0.232 Sum_probs=60.5
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhh---HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNT---AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF 706 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 706 (817)
..++-|++.++++.+++.|++++++|++.... +....+..|+.... ...++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--------------------------~d~ll 169 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--------------------------EEHLL 169 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--------------------------cceEE
Confidence 34577999999999999999999999987443 33556677875321 12233
Q ss_pred EecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhh
Q 003468 707 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 742 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~ 742 (817)
.|-....|..-.+.+.+....++++||..+|.....
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 443334465555566555677999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.022 Score=51.76 Aligned_cols=93 Identities=13% Similarity=0.140 Sum_probs=60.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCC-CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGD-NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA- 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~- 709 (817)
++.+++.++++.|+++|+++.++|+. ....+..+.+..+.. . .+ .. +.... ...+.+..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~--~-~i----~~------l~~~f------~~~~~~~~~ 89 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDF--G-II----FP------LAEYF------DPLTIGYWL 89 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcccc--c-cc----hh------hHhhh------hhhhhcCCC
Confidence 78999999999999999999999999 777777776766610 0 00 00 00000 00011111
Q ss_pred -CcccHHHHHHHHh--cCCCEEEEEcCCccCHHHhhh
Q 003468 710 -EPRHKQEIVRLLK--EDGEVVAMTGDGVNDAPALKL 743 (817)
Q Consensus 710 -~p~~K~~iv~~l~--~~~~~v~~~GDg~ND~~~l~~ 743 (817)
.|+.=..+++.++ -..+.+++|||...|...++.
T Consensus 90 pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 2333345666666 667899999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.019 Score=54.10 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=60.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
..+++.++++.|++.|+++.++|+.....+....+.. +...... ++. ... +..+..|+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~----i~~----------------~~~-~~~Kp~~~ 122 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDL----ILG----------------SDE-FGAKPEPE 122 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcE----EEe----------------cCC-CCCCcCHH
Confidence 3478999999999999999999999999888877765 3211000 000 000 11122333
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCC
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 745 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~ 745 (817)
--..+.+.++... .++++||+.+|+.+-+.|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 3344555565555 8999999999999988775
|
HAD subfamilies caused by an overly broad single model. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.014 Score=54.58 Aligned_cols=95 Identities=14% Similarity=0.078 Sum_probs=66.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+++|++.+.++.|+ .++++.++|.-....+..+.+.+++... +...++..++. .+..|
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~---~f~~i~~~~d~------------------~~~KP 102 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY---FGYRRLFRDEC------------------VFVKG 102 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC---EeeeEEECccc------------------cccCC
Confidence 46999999999999 5799999999999999999999887421 10111111110 01122
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
. -...++.+....+.+++|||..+|+.+-+.|+|-|.
T Consensus 103 ~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 122345566667899999999999999888877664
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.03 Score=56.02 Aligned_cols=99 Identities=13% Similarity=0.117 Sum_probs=69.6
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC---CCCCCccccccccChhHHHHHHHHhHhhccCCceEE
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG---VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF 706 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 706 (817)
+-++.|++.+++++|+++|+++.++|..+......+.+..+ +...-..+ + ...+.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~-------------------f---d~~~g 150 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGY-------------------F---DTTVG 150 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceE-------------------E---EeCcc
Confidence 35689999999999999999999999998877776665542 21100000 0 01111
Q ss_pred EecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 707 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
....|+-=..+++.++-..+.++++||...|+.+-+.||+-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 22334444667777777778899999999999999999997543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.075 Score=52.96 Aligned_cols=81 Identities=21% Similarity=0.224 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhh---HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNT---AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
-|.-|++.++++.+++.|++|+++|||.... +..-.++.|+... ..++-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----------------------------~~LiL 170 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----------------------------KHLIL 170 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----------------------------Ceeee
Confidence 3678999999999999999999999999765 3344556776531 11222
Q ss_pred ecC-------cccHHHHHHHHhcCCC-EEEEEcCCccCHH
Q 003468 708 RAE-------PRHKQEIVRLLKEDGE-VVAMTGDGVNDAP 739 (817)
Q Consensus 708 r~~-------p~~K~~iv~~l~~~~~-~v~~~GDg~ND~~ 739 (817)
|.. .+-|...-+.+.+.|. +++.+||..+|..
T Consensus 171 R~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 171 RGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred cCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 321 1126566656665654 5677999999973
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.035 Score=55.92 Aligned_cols=100 Identities=19% Similarity=0.206 Sum_probs=61.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHH-HHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEA-ICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++|+.|+++|+++.++||-....... ..+..++.... ...+..++. ..-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f----~~i~~~~~~--------------~~~~~KP~ 139 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM----HHVVTGDDP--------------EVKQGKPA 139 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC----CEEEECChh--------------hccCCCCC
Confidence 467999999999999999999999987654332 22222332110 000110000 00001123
Q ss_pred cccHHHHHHHHh---cCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 711 PRHKQEIVRLLK---EDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 711 p~~K~~iv~~l~---~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+--...++.+. -..+.+++|||+..|+.+-+.||+-..
T Consensus 140 p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 140 PDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred cHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 333355566664 446889999999999999999999743
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.046 Score=52.18 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=59.2
Q ss_pred cHHHHHHHHHHHHcCCeEEEECCCCHh------------hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccC
Q 003468 634 REEVRQAIEDCKAAGIRVMVITGDNKN------------TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQD 701 (817)
Q Consensus 634 r~~~~~~I~~l~~~gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (817)
-|++.++++.|+++|+++.++|..... .+..+.+.+|+.. . .+ ...
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~-~-~i---i~~----------------- 101 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI-Q-VL---AAT----------------- 101 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE-E-EE---Eec-----------------
Confidence 489999999999999999999975542 3456677777732 0 00 000
Q ss_pred CceEEEecCcccHHHHHHHHh--cCCCEEEEEcCCc--------cCHHHhhhCCceE
Q 003468 702 GGLLFSRAEPRHKQEIVRLLK--EDGEVVAMTGDGV--------NDAPALKLADIGV 748 (817)
Q Consensus 702 ~~~v~~r~~p~~K~~iv~~l~--~~~~~v~~~GDg~--------ND~~~l~~A~vgi 748 (817)
.........|+-=..+++.++ -..+.++||||.. +|+.+-+.||+-.
T Consensus 102 ~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 102 HAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000000112222244555555 4457899999986 6999999888755
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.06 Score=66.83 Aligned_cols=130 Identities=12% Similarity=0.151 Sum_probs=85.8
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+-|++.++++.|+++|+++.++|+.....+....+..|+.... +..++..++ .-.....|+
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~---Fd~iv~~~~----------------~~~~KP~Pe 222 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM---FDAIVSADA----------------FENLKPAPD 222 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH---CCEEEECcc----------------cccCCCCHH
Confidence 5689999999999999999999999999998888999884110 000111000 000122333
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCC--CccHHHHhhcCEEeccCCccHHHHHHHHh
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGI--AGTEVAKEASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~--~~~~~ak~~ad~vl~~~~~~~i~~~i~~g 781 (817)
-=...++.++...+.+++|||..+|+.+-+.|++- |++.. ...+.....+|+++.+-..-.+..++..|
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 33556677777778899999999999999999985 44431 12233445778888764333455554433
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.098 Score=48.32 Aligned_cols=85 Identities=21% Similarity=0.351 Sum_probs=67.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
...|++++-+..++++|++++++|..+...+...++.+|+.. ++--..|
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f-------------------------------i~~A~KP 94 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF-------------------------------IYRAKKP 94 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce-------------------------------eecccCc
Confidence 478999999999999999999999999999999999999853 1111223
Q ss_pred ccH--HHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce
Q 003468 712 RHK--QEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG 747 (817)
Q Consensus 712 ~~K--~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg 747 (817)
-.+ .+.++.++...+.|+|+||.. .|+-+=+.||+=
T Consensus 95 ~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 95 FGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred cHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 332 456667777789999999995 698887777765
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.06 Score=57.66 Aligned_cols=99 Identities=16% Similarity=0.105 Sum_probs=59.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCC---------------CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGD---------------NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKN 696 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (817)
++.|++.++++.|+++|++++++|+- ....+..+.+..|+.- ...+.......
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~s----------- 97 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPE----------- 97 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCc-----------
Confidence 57899999999999999999999983 1223445556666531 00000000000
Q ss_pred hhccCCceEEEecCccc--HHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 697 YLRQDGGLLFSRAEPRH--KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 697 ~~~~~~~~v~~r~~p~~--K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
+. ..+ ..|.. =..+.+.+......++||||+.+|..+-+.|++-..
T Consensus 98 -----d~-~~~-rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 -----DN-CSC-RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -----cc-CCC-CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00 001 12221 122333344445889999999999999999999844
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.02 Score=57.36 Aligned_cols=104 Identities=20% Similarity=0.251 Sum_probs=64.6
Q ss_pred CCcHHHHHHHHHH--HHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec
Q 003468 632 PPREEVRQAIEDC--KAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l--~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 709 (817)
|+.|+.+++++.+ ++.|+.++++|.-+..-...+.+.-|+...-..++.... .++. ........+.. .-+.++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa---~~~~-~G~l~v~pyh~-h~C~~C 145 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPA---CFDA-DGRLRVRPYHS-HGCSLC 145 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCc---eecC-CceEEEeCccC-CCCCcC
Confidence 5688999999999 457999999999999999999999998542111111100 0000 00000000000 012233
Q ss_pred Ccc-cHHHHHHHHhcC----C---CEEEEEcCCccCHHH
Q 003468 710 EPR-HKQEIVRLLKED----G---EVVAMTGDGVNDAPA 740 (817)
Q Consensus 710 ~p~-~K~~iv~~l~~~----~---~~v~~~GDg~ND~~~ 740 (817)
.|. =|..+++.+... | +.|+++|||.||...
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 332 488888877654 3 789999999999553
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.074 Score=52.60 Aligned_cols=92 Identities=20% Similarity=0.185 Sum_probs=62.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH-hCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE-IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR-- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-- 708 (817)
++.|++.++++.|+++|+++.++|.-+.......... .++... + +..+.+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----------------------f---d~v~~s~~~ 137 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----------------------A---DHIYLSQDL 137 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----------------------c---CEEEEeccc
Confidence 4689999999999999999999999876654432221 222110 0 1112221
Q ss_pred ----cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 709 ----AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 709 ----~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
..|+-=..+++.++...+.+++|||...|+.+-+.||+-..
T Consensus 138 ~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 138 GMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred CCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 22333355667777777889999999999999999999643
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.25 Score=51.02 Aligned_cols=48 Identities=17% Similarity=0.296 Sum_probs=37.9
Q ss_pred EEeccCCC----CcHHHHHHHHHHHHcCCeEEEECCCCHhh---HHHHHHHhCCC
Q 003468 625 GMVGLRDP----PREEVRQAIEDCKAAGIRVMVITGDNKNT---AEAICREIGVF 672 (817)
Q Consensus 625 G~~~~~d~----~r~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~ 672 (817)
|++.-.+. +-|++.++|++|+++|++++++||++..+ .....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555566 88899999999999999999999987776 44455567763
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.022 Score=54.66 Aligned_cols=120 Identities=22% Similarity=0.256 Sum_probs=70.3
Q ss_pred CCcHHHHHHHHHHHHcCC-eEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGI-RVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
|+-|+..++|+.+++.|- .++|+|.-|......+.+..|+.. ++..+++.....+-........++... -|...
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d----~F~~IfTNPa~~da~G~L~v~pyH~~h-sC~~C 158 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD----LFSEIFTNPACVDASGRLLVRPYHTQH-SCNLC 158 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH----HHHHHhcCCcccCCCCcEEeecCCCCC-ccCcC
Confidence 678999999999999997 999999999999888888888731 000001000000000000000000001 12223
Q ss_pred ccc--HHHHHHHHhcC-------CCEEEEEcCCccC-HHHhhhCCceEEeCCCccH
Q 003468 711 PRH--KQEIVRLLKED-------GEVVAMTGDGVND-APALKLADIGVAMGIAGTE 756 (817)
Q Consensus 711 p~~--K~~iv~~l~~~-------~~~v~~~GDg~ND-~~~l~~A~vgiamg~~~~~ 756 (817)
|.. |..++..++.. .+.+.++|||.|| +|+++...--+||-..|=+
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 333 55555555432 2478999999999 5777777777777644443
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.041 Score=56.43 Aligned_cols=70 Identities=21% Similarity=0.284 Sum_probs=49.7
Q ss_pred eEEEecCcccHHHHHHHHhcC----CCEEEEEcCCccCHHHhhhC--------CceEEeCCCccHHHHhhcCEEeccCCc
Q 003468 704 LLFSRAEPRHKQEIVRLLKED----GEVVAMTGDGVNDAPALKLA--------DIGVAMGIAGTEVAKEASDMVLADDNF 771 (817)
Q Consensus 704 ~v~~r~~p~~K~~iv~~l~~~----~~~v~~~GDg~ND~~~l~~A--------~vgiamg~~~~~~ak~~ad~vl~~~~~ 771 (817)
.+-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ++||+|+ .+. .+..|++++.+ .
T Consensus 158 ~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~--~ 232 (244)
T TIGR00685 158 VVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTG--P 232 (244)
T ss_pred EEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCC--H
Confidence 344556667887766665433 45799999999999999999 5889895 232 35678998874 5
Q ss_pred cHHHHHH
Q 003468 772 GTIVAAV 778 (817)
Q Consensus 772 ~~i~~~i 778 (817)
..+...+
T Consensus 233 ~~v~~~L 239 (244)
T TIGR00685 233 QQVLEFL 239 (244)
T ss_pred HHHHHHH
Confidence 5555554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.039 Score=55.14 Aligned_cols=91 Identities=19% Similarity=0.169 Sum_probs=60.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhh--HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNT--AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS-- 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 707 (817)
++.|++.++++.|+++|++++++|...... ........++...- +..+.+
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--------------------------d~v~~s~~ 147 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--------------------------DAVVESCL 147 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--------------------------CEEEEeee
Confidence 578999999999999999999999875433 22222223332110 111111
Q ss_pred ----ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 708 ----RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 708 ----r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
+..|+--..+++.++...+.+++|||...|+.+-+.||+-.
T Consensus 148 ~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 148 EGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred cCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 22233334556666666788999999999999999999863
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.041 Score=55.49 Aligned_cols=97 Identities=12% Similarity=0.145 Sum_probs=66.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.| ++++.++|+.....+...-+..|+...-.. .++++.+.. ..+..|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~---~v~~~~~~~----------------~~KP~p 145 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD---KLFSGYDIQ----------------RWKPDP 145 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc---eEeeHHhcC----------------CCCCCh
Confidence 3567899999988 489999999988888888788887532100 011111000 011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
+-=....+.+....+.+++|||+.+|+.+-+.||+.+..
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 444556666766678899999999999999999988754
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.12 Score=55.33 Aligned_cols=93 Identities=11% Similarity=0.133 Sum_probs=70.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH----hCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE----IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
++.+++.++++.|+++|+.+.++|..+...+..+.+. +|+...- ..+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------DARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------eEEEE
Confidence 3578999999999999999999999999999998887 6663210 00111
Q ss_pred --ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 708 --RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 708 --r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
...|+.-..+++.+....+.++++||...|+.+.+.+...|.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 12233345566666666789999999999999999998887554
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.21 Score=47.25 Aligned_cols=89 Identities=19% Similarity=0.252 Sum_probs=68.2
Q ss_pred CCCCcHHHHHHHHHHHHcCCe--EEEECCC-------CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhcc
Q 003468 630 RDPPREEVRQAIEDCKAAGIR--VMVITGD-------NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQ 700 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~--v~~~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (817)
++.+.|+..+.+++|++.+.. ++++|.. +...|..+++.+|+.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp---------------------------- 108 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP---------------------------- 108 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----------------------------
Confidence 467889999999999999874 9999986 478899999999984
Q ss_pred CCceEEEecCcccHHHHHHHHhcC-----CCEEEEEcCCc-cCHHHhhhCC-ceE
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGV-NDAPALKLAD-IGV 748 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~~~-----~~~v~~~GDg~-ND~~~l~~A~-vgi 748 (817)
...+..-.|.-..++.++++.. .+.++++||-. .|+-|=...| .+|
T Consensus 109 --vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~ti 161 (168)
T PF09419_consen 109 --VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTI 161 (168)
T ss_pred --EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEE
Confidence 1122234676667788888654 77899999994 6888766665 444
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.25 Score=50.60 Aligned_cols=47 Identities=13% Similarity=0.241 Sum_probs=41.1
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH---hCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE---IGV 671 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~---~gi 671 (817)
|++.-.+.+-|++.++++.|+++|++++++|++...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 66666778899999999999999999999999999888877776 466
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.092 Score=45.39 Aligned_cols=48 Identities=17% Similarity=0.351 Sum_probs=36.3
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHH---HHhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC---REIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 672 (817)
|++...+.+-|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 556667888999999999999999999999988766544444 567775
|
... |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.39 Score=49.30 Aligned_cols=49 Identities=8% Similarity=0.127 Sum_probs=40.2
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECC---CCHhhHHHHHHHhCCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITG---DNKNTAEAICREIGVFG 673 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TG---d~~~~a~~ia~~~gi~~ 673 (817)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44555566677999999999999999999996 77888888888888753
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.14 Score=52.40 Aligned_cols=48 Identities=15% Similarity=0.201 Sum_probs=38.8
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH--HHHHHhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE--AICREIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~--~ia~~~gi~ 672 (817)
|.+.-.+.+-|++.+++++|+++|+++.++|........ ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 556666788999999999999999999999986554443 566788885
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.32 Score=47.34 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=65.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.+++.+++++|+ .+++++|.-+...+....+.+|+...-.. ++..++.. .........|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~----i~~~~~~~------------~~~~~~KP~p 144 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDG----IFCFDTAN------------PDYLLPKPSP 144 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCe----EEEeeccc------------CccCCCCCCH
Confidence 36789999999997 47999999999999999999998431110 00000000 0000011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
+-=..+++.++...+.+++|||...|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 3335566777777788999999999999999998864
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.2 Score=53.32 Aligned_cols=48 Identities=15% Similarity=0.298 Sum_probs=40.1
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHH---HHhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC---REIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 672 (817)
|++.-.+.+-|++.++|+.|++.|++++++|++...+...++ +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 566666777899999999999999999999999977777766 557764
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.2 Score=48.91 Aligned_cols=90 Identities=13% Similarity=0.161 Sum_probs=62.9
Q ss_pred HHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHH
Q 003468 638 RQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEI 717 (817)
Q Consensus 638 ~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~i 717 (817)
.++++.|++. +++.++|+.....+....+..|+...-. .+++.++. -..+..|+-=...
T Consensus 93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd----~i~~~~~~----------------~~~KP~p~~~~~~ 151 (188)
T PRK10725 93 IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD----AVVAADDV----------------QHHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce----EEEehhhc----------------cCCCCChHHHHHH
Confidence 5889999875 8999999999999999999999853211 11111100 0012233334556
Q ss_pred HHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 718 VRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 718 v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
.+.++...+.+++|||..+|+.+-+.||+-+
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 6667666678999999999999999999864
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.22 Score=53.73 Aligned_cols=62 Identities=21% Similarity=0.254 Sum_probs=44.4
Q ss_pred ccHHHHHHHHhcC-C---C---EEEEEcCCccCHHHhhh-----CCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKED-G---E---VVAMTGDGVNDAPALKL-----ADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~-~---~---~v~~~GDg~ND~~~l~~-----A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.+|...++.+.+. + . .++++||+.||.+||+. +++||+||+ +... -.|++.+.+ -+.+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn-~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS-VPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec-CCCC--ccceEEcCC--HHHHHHHH
Confidence 4888777766543 1 2 24899999999999996 699999994 4432 257888765 55666555
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.43 E-value=0.47 Score=47.74 Aligned_cols=99 Identities=21% Similarity=0.237 Sum_probs=78.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.++.|++.+++..|++.|+.+...|+.....+..+.+.+|+...- ...+++++.. -.+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f----~~~v~~~dv~----------------~~KP~ 144 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF----DVIVTADDVA----------------RGKPA 144 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc----chhccHHHHh----------------cCCCC
Confidence 367899999999999999999999999999999999999986432 1122222221 11355
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+-=....+.|.-....+++|.|+.+.+.+-++||+-+-
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 666677788887788999999999999999999998854
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.43 E-value=3.6 Score=44.25 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=36.0
Q ss_pred CeEEEEEeccCC--CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHH
Q 003468 620 RLVFVGMVGLRD--PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR 667 (817)
Q Consensus 620 ~l~~lG~~~~~d--~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~ 667 (817)
|.+++-++.-.| .+.+++.++|++|. .|++++++||+.......+..
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhc
Confidence 344444443333 47899999999999 789999999999999988743
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=90.81 E-value=0.7 Score=45.48 Aligned_cols=93 Identities=12% Similarity=0.104 Sum_probs=56.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE- 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~- 710 (817)
++.|++.++++.|++.+ +.+++|.-+........+.+++.......+ ...+.+...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f----------------------~~i~~~~~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAF----------------------SEVLMCGHDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcc----------------------cEEEEeccCc
Confidence 36889999999999975 566777655544444555666532100000 111222222
Q ss_pred --cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC--CceEE
Q 003468 711 --PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA--DIGVA 749 (817)
Q Consensus 711 --p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A--~vgia 749 (817)
|+--..+++.++ .+.+++|||..+|+.+-++| |+-..
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 222223344444 35688999999999999999 99643
|
2 hypothetical protein; Provisional |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.37 Score=49.32 Aligned_cols=40 Identities=25% Similarity=0.337 Sum_probs=35.5
Q ss_pred cccHHHHHHHHhcCCCEEEEEcC----CccCHHHhhh-CCceEEeC
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGD----GVNDAPALKL-ADIGVAMG 751 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GD----g~ND~~~l~~-A~vgiamg 751 (817)
-.+|..-++.|+ ..+.|++||| |.||.+||+. .=.|+++.
T Consensus 187 gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 187 GWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 357999999999 8899999999 8999999997 77788886
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=90.12 E-value=0.57 Score=47.28 Aligned_cols=82 Identities=21% Similarity=0.354 Sum_probs=54.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhh---HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNT---AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+.-|++.+.++.+++.|++|+++|||+... +..-.++.|+...+. .++-.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~---------------------------l~lr~ 167 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDH---------------------------LILRP 167 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSC---------------------------GEEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccch---------------------------hcccc
Confidence 456789999999999999999999997653 333456667643211 11111
Q ss_pred cC-------cccHHHHHHHHhcCC-CEEEEEcCCccCHHH
Q 003468 709 AE-------PRHKQEIVRLLKEDG-EVVAMTGDGVNDAPA 740 (817)
Q Consensus 709 ~~-------p~~K~~iv~~l~~~~-~~v~~~GDg~ND~~~ 740 (817)
.. .+.|...-+.+.+.| ++++.+||..+|..-
T Consensus 168 ~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 168 DKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 11 223667777777774 566789999999874
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=90.01 E-value=1.8 Score=40.44 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=66.1
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHH---HHHHh-----CCCCCCccccccccChhHHHHHHHHhHhhccCC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEA---ICREI-----GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDG 702 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (817)
|..++++.+..+.+++.|++++.+|+|..-.+.. ..... ++... . ..++.+.+.. .+ .
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G--p---v~~sP~~l~~------al---~ 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG--P---VLLSPDSLFS------AL---H 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC--C---EEECCcchhh------hh---h
Confidence 6899999999999999999999999998755543 33333 33211 0 0011000000 00 1
Q ss_pred ceEEEecCcccHHHHHHHHhcC-----CCEEEEEcCCccCHHHhhhCCce
Q 003468 703 GLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 703 ~~v~~r~~p~~K~~iv~~l~~~-----~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
..+..+-..+.|...++.++.. ...++++|...+|+.+-++++|-
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 1122333446788888877653 45678899999999999988775
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.84 E-value=2 Score=41.22 Aligned_cols=51 Identities=14% Similarity=0.283 Sum_probs=42.3
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHH---HHhCCC
Q 003468 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC---REIGVF 672 (817)
Q Consensus 622 ~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 672 (817)
.+-|.+.++|..-|++.++++.|+.++.+|.++|.-...+-+.+. +.+|+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 356999999999999999999999999999999877666655554 456764
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.15 E-value=1.2 Score=41.41 Aligned_cols=83 Identities=22% Similarity=0.378 Sum_probs=58.4
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHh----hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKN----TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+++-+++.|..-++.|=.++++||+... ++..+|+...|.+. ..++|+-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m---------------------------~pv~f~G 167 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM---------------------------NPVIFAG 167 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC---------------------------cceeecc
Confidence 5667789999999999999999999874 34566666666543 2334443
Q ss_pred cCc----ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc
Q 003468 709 AEP----RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI 746 (817)
Q Consensus 709 ~~p----~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v 746 (817)
..| ..|-.. ++.. ..-+.-||+.||+.+-+.|++
T Consensus 168 dk~k~~qy~Kt~~---i~~~-~~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 168 DKPKPGQYTKTQW---IQDK-NIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred CCCCcccccccHH---HHhc-CceEEecCCchhhhHHHhcCc
Confidence 333 235433 4443 345788999999999999986
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.88 E-value=1.5 Score=44.18 Aligned_cols=90 Identities=18% Similarity=0.256 Sum_probs=64.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE---
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--- 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--- 707 (817)
=++-+++.++++.+++. .+++++|--....+....+++|+...- +..+.+
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~F--------------------------d~v~~s~~~ 150 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYF--------------------------DAVFISEDV 150 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhh--------------------------heEEEeccc
Confidence 35678899999999999 999999998888888889999974321 111111
Q ss_pred -ecCcccH--HHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCce
Q 003468 708 -RAEPRHK--QEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIG 747 (817)
Q Consensus 708 -r~~p~~K--~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vg 747 (817)
...|..+ ..+.+.++...+.+++|||+ .||+..-+.+|+-
T Consensus 151 g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 151 GVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred ccCCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 2234333 55666777667899999998 5785666777764
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=88.65 E-value=3.1 Score=42.47 Aligned_cols=43 Identities=14% Similarity=0.317 Sum_probs=32.3
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHH---HHHhCCC
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAI---CREIGVF 672 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~i---a~~~gi~ 672 (817)
+.|.-|++.+..+.+++.|++|+++|||....-... .++.|+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 356778999999999999999999999986432222 2345664
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.22 E-value=1.3 Score=45.11 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=58.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS---- 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---- 707 (817)
++-|++.++++.|++. +++.++|..+.. .+..|+...- +..+.+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f--------------------------d~i~~~~~~~ 160 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF--------------------------EFVLRAGPHG 160 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh--------------------------ceeEecccCC
Confidence 4668999999999975 899999986554 1455653210 111111
Q ss_pred ecCc--ccHHHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCceEEeC
Q 003468 708 RAEP--RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGVAMG 751 (817)
Q Consensus 708 r~~p--~~K~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgiamg 751 (817)
+..| +-=...++.++...+.+++|||. ..|+.+-+.||+-....
T Consensus 161 ~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 161 RSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred cCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 1122 22234455666667889999999 59999999999876554
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.08 E-value=3.5 Score=39.51 Aligned_cols=97 Identities=25% Similarity=0.301 Sum_probs=60.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHh-hc----cCCceEEE
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY-LR----QDGGLLFS 707 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~v~~ 707 (817)
+.+++.+++..++++|.+++|+|--+ |+. ...++..++....+.... +. .-+.+++|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~-------rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIG-------RGYFTEADFDKLHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Ccc-------ccCccHHHHHHHHHHHHHHHHHcCCccceEEEC
Confidence 46889999999999999999998532 221 123344444443221110 00 11344556
Q ss_pred ecCccc--------HHHHHHHHhcC---CCEEEEEcCCccCHHHhhhCCce
Q 003468 708 RAEPRH--------KQEIVRLLKED---GEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 708 r~~p~~--------K~~iv~~l~~~---~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
.-.|++ ...+.+.+++. .....+|||...|..+-..|++.
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 555553 23344444443 47889999999999999888887
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=86.54 E-value=5.1 Score=40.64 Aligned_cols=66 Identities=24% Similarity=0.292 Sum_probs=32.7
Q ss_pred ceEEEecCcccHHHHHHHHhcCC-------CEEEEEcCCccCHHHhhhC------CceEEeCCCccHHHHhhcCEEecc
Q 003468 703 GLLFSRAEPRHKQEIVRLLKEDG-------EVVAMTGDGVNDAPALKLA------DIGVAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 703 ~~v~~r~~p~~K~~iv~~l~~~~-------~~v~~~GDg~ND~~~l~~A------~vgiamg~~~~~~ak~~ad~vl~~ 768 (817)
..+-.|..-..|...++.+-+.. ..++++||...|-.|++.. +++|.++.........+|++-+.+
T Consensus 155 ~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 155 KVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp SEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 34445555556888888765543 3689999999999999873 678888833222334567776654
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=85.30 E-value=4.1 Score=46.08 Aligned_cols=97 Identities=18% Similarity=0.138 Sum_probs=61.8
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH-hCCCCCCccccccccChhHHHHHHHHhHhhcc-CCceEEEe--
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE-IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQ-DGGLLFSR-- 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~r-- 708 (817)
+++++.+. +++.|. .+++|+-...-+..+|++ +|++.- . +.++ .. .+..+-.+
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSASp~~~Vepfa~~~LGid~V----I-----gTeL----------ev~~~G~~TG~i~ 167 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITASPRIMVEPFVKTFLGADKV----L-----GTEL----------EVSKSGRATGFMK 167 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEECCcHHHHHHHHHHcCCCCEE----E-----eccc----------EECcCCEEeeeec
Confidence 56665554 456775 499999999999999987 898621 0 0000 00 01111112
Q ss_pred ----cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC
Q 003468 709 ----AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI 752 (817)
Q Consensus 709 ----~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~ 752 (817)
+.-++|.+-++..........+.||+.||.|||+.|+-+++++.
T Consensus 168 g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 168 KPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 23456776665432211223799999999999999999999984
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=83.06 E-value=3.8 Score=42.87 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=36.4
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHH---HHHHhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEA---ICREIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~---ia~~~gi~ 672 (817)
|++.-.+.+-|++.++|++|+++|++++++|++...+... -.+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4445566777889999999999999999999987554444 33557764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=81.99 E-value=1.7 Score=41.64 Aligned_cols=86 Identities=12% Similarity=0.134 Sum_probs=56.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++ ++.++|.-+........+.+|+...- ..+++.++. -.....|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~v~~~~~~----------------~~~KP~p 142 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF----DRAFSVDTV----------------RAYKPDP 142 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH----hhhccHhhc----------------CCCCCCH
Confidence 46788888888 37889999888888888888874311 011111110 0112234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 744 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A 744 (817)
+-=..+.+.++...+.+++|||+..|+.+-+++
T Consensus 143 ~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 143 VVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 333566777777778999999999999876543
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=81.98 E-value=2.5 Score=43.60 Aligned_cols=41 Identities=10% Similarity=0.181 Sum_probs=38.0
Q ss_pred Cc-HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC
Q 003468 633 PR-EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG 673 (817)
Q Consensus 633 ~r-~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 673 (817)
+| |++.+++++|+++|++++++|+.....+....+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 45 999999999999999999999999999999999999964
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=81.14 E-value=1.2 Score=42.31 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=61.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
..||++.+.++.|.+. ..+++.|-.....|..+.+.++..... + ...+.. ..+... .|
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~--f-~~~l~r----------------~~~~~~--~~ 99 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKV--I-SRRLYR----------------ESCVFT--NG 99 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCE--E-eEEEEc----------------cccEEe--CC
Confidence 4799999999999988 999999999999999999999874310 0 000000 001110 11
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
.. .+-++.+......|+++||...|..+-+.++|-|
T Consensus 100 ~~-~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 100 KY-VKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred CE-EeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 10 1113334455678999999999887766665554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=80.45 E-value=2.4 Score=38.09 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=29.4
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE 663 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 663 (817)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 678899999999999999999999999876543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 817 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-179 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-179 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-179 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-178 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-87 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-82 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-81 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-78 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 7e-34 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-21 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 3e-25 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 6e-25 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-17 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-17 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-16 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-16 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 5e-16 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 5e-16 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 7e-16 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-15 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-11 | ||
| 2voy_H | 48 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-10 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 2e-09 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 6e-09 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 6e-09 | ||
| 2voy_E | 30 | Cryoem Model Of Copa, The Copper Transporting Atpas | 4e-07 | ||
| 2voy_G | 36 | Cryoem Model Of Copa, The Copper Transporting Atpas | 1e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2VOY|H Chain H, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 48 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2VOY|E Chain E, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 30 | Back alignment and structure |
|
| >pdb|2VOY|G Chain G, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 36 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 817 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-37 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-36 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-33 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-11 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 5e-33 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 8e-32 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-13 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-31 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-26 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-13 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 8e-09 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-08 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 3e-07 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 1e-06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 1e-06 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 4e-06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 1e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 3e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 7e-05 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 7e-05 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 8e-05 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 2e-04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 3e-04 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 4e-04 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 4e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 5e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 5e-04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 6e-04 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 7e-04 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 8e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 1047 bits (2711), Expect = 0.0
Identities = 376/789 (47%), Positives = 508/789 (64%), Gaps = 47/789 (5%)
Query: 25 PAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLV 84
A +K EEC +GV+ GL+ +VK+ E YG+NEL EG S+++L++EQF D LV
Sbjct: 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLV 63
Query: 85 RILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEAL 144
RILL+AA +SFVLAW+ E GE ITAFVEP VI LILI NAIVG+WQE NAE A+EAL
Sbjct: 64 RILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEAL 120
Query: 145 KEIQSEQATVTRDGKK-IPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGS 203
KE + E V R +K + + A+++VPGDIVE+ VGDKVPAD+R+L + S+T+RV+Q
Sbjct: 121 KEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSI 180
Query: 204 LTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQI 262
LTGES +V K + VP + Q KK M+F+GT + G +V TG++TEIGK+ Q+
Sbjct: 181 LTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 240
Query: 263 HEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFE 322
++ TPL++KL++FGE L+ +I +IC VWLIN+ +F + W R
Sbjct: 241 AATE--QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRG------ 292
Query: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LPSVETLGCT+VICS
Sbjct: 293 -AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS 351
Query: 383 DKTGTLTTNQMAVTKLVAVGSRAG---TLRSFNVQGTTYNPSDGRI--EGWPV-GRMDAN 436
DKTGTLTTNQM+V K+ + G +L F++ G+TY P +G + P+
Sbjct: 352 DKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAP-EGEVLKNDKPIRSGQFDG 410
Query: 437 LQTIAKISAVCNDAGVEQSG--NHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDV 494
L +A I A+CND+ ++ + Y G TE AL +VEKM + S E
Sbjct: 411 LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNT-EVRNLSKVERA 469
Query: 495 LRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNK-----KLLVKGAVENLLERSSFV 549
C + L ++ TLEF RDRKSM V + + ++ K+ VKGA E +++R ++V
Sbjct: 470 NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYV 529
Query: 550 QLLDGSVVELDQYSRDLILQSLQE--MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQL 607
+ + V + ++ IL ++E LRCL A +D +
Sbjct: 530 -RVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD----------TPPKREEMV 578
Query: 608 LLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR 667
L + + + E+ L FVG+VG+ DPPR+EV +I+ C+ AGIRV++ITGDNK TA AICR
Sbjct: 579 LDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR 638
Query: 668 EIGVFGAHEDISSQSITGKEF--MDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDG 725
IG+FG +E+++ ++ TG+EF + + Q+ R+ F+R EP HK +IV L+
Sbjct: 639 RIGIFGENEEVADRAYTGREFDDLPLAEQREACRR--ACCFARVEPSHKSKIVEYLQSYD 696
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIY 785
E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EGR+IY
Sbjct: 697 EITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIY 755
Query: 786 NNMKAFIRY 794
NNMK FIRY
Sbjct: 756 NNMKQFIRY 764
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 850 bits (2198), Expect = 0.0
Identities = 235/824 (28%), Positives = 365/824 (44%), Gaps = 94/824 (11%)
Query: 2 GKGSQNTGKRGNFDKESSNEETFPAW-AKDVEECEEKYGVNPKIGLSVGEVKKRREIYGY 60
K + G + E+ +E V E E+KY + GLS + G
Sbjct: 28 KKKAGRGGGKRKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGP 87
Query: 61 NELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIF 120
N L GT + Q L ++ VAA + + EG L +
Sbjct: 88 NALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALI 147
Query: 121 LILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180
+++V G +QE + + + K + +QATV RDG K ++A +LV GD+VE+K G
Sbjct: 148 AVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKF-QINADQLVVGDLVEMKGG 206
Query: 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNG 240
D+VPAD+R+L+ + +V+ SLTGESE +++ + E+ + + F T + G
Sbjct: 207 DRVPADIRILQ--AQGRKVDNSSLTGESEPQTRSPECTHES--PLETRNIAFFSTMCLEG 262
Query: 241 TCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLIN 300
T LV NTG T IG++ S E TP+ ++ F +++ + + A +++
Sbjct: 263 TAQGLVVNTGDRTIIGRIASLASGVE--NEKTPIAIEIEHFVDIIAGLAILFGATFFIVA 320
Query: 301 VKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQ 360
+ R F +A+ VA +PEGL A +T CL+L +++A
Sbjct: 321 ---MCIGY---TFLRAMVF-----------FMAIVVAYVPEGLLATVTVCLSLTAKRLAS 363
Query: 361 KNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNP 420
KN +V+ L +VETLG T+VICSDKTGTLT N+M V+ L + T
Sbjct: 364 KNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDN------HIHSADTTEDQS 417
Query: 421 SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNH-----YVASGMPTEAALKVMVE 475
G + + + ++ +CN A + + + G +E AL E
Sbjct: 418 ------GQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSE 471
Query: 476 KMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLV---NSSSGNKK 532
+ + + F+ K + +
Sbjct: 472 LTLG----------NAMGYRERFP-------KVCEIPFNSTNKFQLSIHTLEDPRDPRHV 514
Query: 533 LLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLRE 592
L++KGA E +LER S + L+ G + LD+ R+ + + R LGF
Sbjct: 515 LVMKGAPERVLERCSSI-LIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYL--- 570
Query: 593 FETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVM 652
E + + S L F G+V + DPPR V A+ C+ AGIRV+
Sbjct: 571 ------SEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVI 624
Query: 653 VITGDNKNTAEAICREIGVFG--------------------AHEDISSQSITGKEF--MD 690
++TGD+ TA+AI +G+ +D + I G + MD
Sbjct: 625 MVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMD 684
Query: 691 IHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750
LR ++F+R P+ K IV + G +VA+TGDGVND+PALK ADIGVAM
Sbjct: 685 PSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM 744
Query: 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRY 794
GIAG++ AK A+DM+L DDNF +IV V +GR I++N+K I Y
Sbjct: 745 GIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAY 788
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 815 bits (2107), Expect = 0.0
Identities = 222/823 (26%), Positives = 378/823 (45%), Gaps = 95/823 (11%)
Query: 3 KGSQNTGKRGNFDKESSNEETFPAW-AKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYN 61
KG ++ + D + +E ++E KYG + GL+ K+ G N
Sbjct: 25 KGKKDKIDKKR-DLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPN 83
Query: 62 ELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFL 121
L T + Q +L + A++ F+ E +V+
Sbjct: 84 SLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLST 143
Query: 122 ILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGD 181
++IV +QE+ + + +++ K + +QA V RDG+K +++A+ +V GD+VE+K GD
Sbjct: 144 VVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKS-TINAEFVVAGDLVEVKGGD 202
Query: 182 KVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGT 241
++PAD+R++ + +V+ SLTGESE +++ + EN + + F T V GT
Sbjct: 203 RIPADLRIIS--AHGCKVDNSSLTGESEPQTRSPEFSSEN--PLETRNIAFFSTNCVEGT 258
Query: 242 CTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINV 301
+V TG T +G++ + TP+ ++ F ++T + + ++++
Sbjct: 259 ARGVVVYTGDRTVMGRIATLASGLE--VGRTPIAIEIEHFIHIITGVAVFLGVSFFILS- 315
Query: 302 KYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQK 361
+ W F + + VA +PEGL A +T CL L ++MA+K
Sbjct: 316 --LILGY---SWLEAVIF-----------LIGIIVANVPEGLLATVTVCLTLTAKRMARK 359
Query: 362 NALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPS 421
N LV+ L +VETLG T+ ICSDKTGTLT N+M V + + T
Sbjct: 360 NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDN------QIHEADTTENQS- 412
Query: 422 DGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNH-----YVASGMPTEAALKVMVEK 476
+ + A +++I+A+CN A + ++ +G +E+AL +E
Sbjct: 413 GAAFD-----KTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIEL 467
Query: 477 MGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLV---NSSSGNKKL 533
S + + + + F+ K + SS L
Sbjct: 468 CCG----------SVQGMRDRNP-------KIVEIPFNSTNKYQLSIHENEKSSESRYLL 510
Query: 534 LVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREF 593
++KGA E +L+R S + LL+G+ L + ++ + E+ R LGF +
Sbjct: 511 VMKGAPERILDRCSTI-LLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFA----- 564
Query: 594 ETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMV 653
ED + + + L FVG++ + DPPR V A+ C++AGI+V++
Sbjct: 565 ----LPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIM 620
Query: 654 ITGDNKNTAEAICREIGVFG--------------------AHEDISSQSITGKEF--MDI 691
+TGD+ TA+AI + +G+ D + + G + +
Sbjct: 621 VTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLST 680
Query: 692 HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751
+ L ++F+R P+ K IV + G +VA+TGDGVND+PALK ADIGVAMG
Sbjct: 681 EVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 740
Query: 752 IAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRY 794
I+G++V+K+A+DM+L DDNF +IV V EGR I++N+K I Y
Sbjct: 741 ISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 783
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 649 bits (1677), Expect = 0.0
Identities = 190/781 (24%), Positives = 321/781 (41%), Gaps = 140/781 (17%)
Query: 17 ESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLIL 76
E ET +EE ++ + + GL+ E + R +I+G N+LE + S L
Sbjct: 5 EDIKNETVDLEKIPIEEVFQQLKCSRE-GLTTQEGEDRIQIFGPNKLE-EKKESKLLKFL 62
Query: 77 EQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESN 136
+ L ++ +AA+++ LA DG + + + I +L++N+ + +E+N
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPD------WQDFVGIICLLVINSTISFIEENN 116
Query: 137 AEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSST 196
A A AL + + V RDGK A LVPGDIV +K+GD +PAD RLL
Sbjct: 117 AGNAAAALMAGLAPKTKVLRDGKWS-EQEAAILVPGDIVSIKLGDIIPADARLL--EGDP 173
Query: 197 VRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIG 256
++V+Q +LTGES V+K P VF+G+T G +V TG++T G
Sbjct: 174 LKVDQSALTGESLPVTKH----PGQ--------EVFSGSTCKQGEIEAVVIATGVHTFFG 221
Query: 257 KVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRN 316
K + + +K L G I + + ++ + +Y DG
Sbjct: 222 KAAHLVDST---NQVGHFQKVLTAIGNFCICSIAIGMVIEIIV-MYPIQRRKYRDG---- 273
Query: 317 FKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGC 376
+ + L + IP +P V++ +A+G+ +++Q+ A+ +++ ++E +
Sbjct: 274 -----------IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322
Query: 377 TTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDAN 436
V+CSDKTGTLT N+++V K + V
Sbjct: 323 MDVLCSDKTGTLTLNKLSVDKNL-----------VEVFCKGVEKDQ-------------- 357
Query: 437 LQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLR 496
+ +A+ + ++ + +AA+ M+
Sbjct: 358 ---VLLFAAMASRV---ENQD-------AIDAAMVGMLADPKE----------------- 387
Query: 497 CCQLWNTLEQRFATLE---FDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLD 553
+ F+ K + SGN + KGA E +LE
Sbjct: 388 -------ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILEL-------- 432
Query: 554 GSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTN 613
+ +L + + + LR L A + +
Sbjct: 433 ---AKASNDLSKKVLSIIDKYAERGLRSLAVARQV--------------------VPEKT 469
Query: 614 YSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG 673
S + FVG++ L DPPR + + I G+ V +ITGD + R +G+ G
Sbjct: 470 KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM-G 528
Query: 674 AHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGD 733
+ SS + + ++ + + F+ P HK EIV+ L+E +V MTGD
Sbjct: 529 TNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGD 588
Query: 734 GVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIR 793
GVNDAPALK ADIG+A+ T+ A+ ASD+VL + I++AV R+I+ MK +
Sbjct: 589 GVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 647
Query: 794 Y 794
Y
Sbjct: 648 Y 648
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 643 bits (1662), Expect = 0.0
Identities = 188/783 (24%), Positives = 335/783 (42%), Gaps = 150/783 (19%)
Query: 15 DKESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQL 74
D E EE P + V E + + ++GL+ EV +RR YG N+++ E + F
Sbjct: 59 DAEEEEEEATPGGGRVVPE--DMLQTDTRVGLTSEEVVQRRRKYGLNQMK-EEKENHFLK 115
Query: 75 ILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQE 134
L F + ++ AAV++ L + F VI +L++NA+VG QE
Sbjct: 116 FLGFFVGPIQFVMEGAAVLAAGLE----------DWVDFG---VICGLLLLNAVVGFVQE 162
Query: 135 SNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTS 194
A ++ LK+ + +A V RDG + A E+VPGDI++++ G +PAD R++
Sbjct: 163 FQAGSIVDELKKTLALKAVVLRDGTLK-EIEAPEVVPGDILQVEEGTIIPADGRIVT-DD 220
Query: 195 STVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTE 254
+ ++V+Q +LTGES AV K + VFA + V G ++T TG NT
Sbjct: 221 AFLQVDQSALTGESLAVDKH----KGD--------QVFASSAVKRGEAFVVITATGDNTF 268
Query: 255 IGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWP 314
+G+ + ++ AS + LN G +L +++ +VW+ + ++ + V
Sbjct: 269 VGRAAALVNAAS--GGSGHFTEVLNGIGTILLILVIFTLLIVWVSS--FYRSNPIVQI-- 322
Query: 315 RNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETL 374
E +A+ + +P GLPAV+TT +A+G +A+K A+V+KL ++E+L
Sbjct: 323 -------------LEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESL 369
Query: 375 GCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMD 434
++CSDKTGTLT N++++ V
Sbjct: 370 AGVEILCSDKTGTLTKNKLSLHDPYTVA-------------------------------G 398
Query: 435 ANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDV 494
+ + + + + ++ + + A ++
Sbjct: 399 VDPEDLMLTACLAASRK-KKGID-------AIDKAFLKSLKYYP---------------- 434
Query: 495 LRCCQLWNTLEQRFATLE---FDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQL 551
++ ++ L+ FD K + +V S G + VKGA +L+
Sbjct: 435 -----RAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHP 489
Query: 552 LDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNP 611
+ V + E ++ R LG A K
Sbjct: 490 IPEEV-------DQAYKNKVAEFATRGFRSLGVARKRG---------------------- 520
Query: 612 TNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGV 671
E +G++ DPPR + + + + K G+ + ++TGD A R++G+
Sbjct: 521 ------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 672 FGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMT 731
+++ + D+ + Y + F+ P+HK +V +L++ G +VAMT
Sbjct: 575 GT--NIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMT 632
Query: 732 GDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAF 791
GDGVNDAP+LK AD G+A+ ++ A+ A+D+V G I+ A+ R I++ M A+
Sbjct: 633 GDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAY 691
Query: 792 IRY 794
+ Y
Sbjct: 692 VVY 694
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 2e-37
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 36/169 (21%)
Query: 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQS 682
+ + D PR ++ +E K G+++++++GD ++ + + +E+ +
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------- 175
Query: 683 ITGKEFMDIHNQKNYLRQDGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 740
+E+ + P K I+ LK++G V M GDGVNDA A
Sbjct: 176 ---QEYY-------------------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213
Query: 741 LKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK 789
L LAD+ VAMG G +++K +D++L ++ GT++ + + + N +
Sbjct: 214 LALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 1e-36
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 42/179 (23%)
Query: 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQS 682
G++ L D R E R+AI KA GI+ M++TGDN+ A+ + E+G+
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL----------- 183
Query: 683 ITGKEFMDIHNQKNYLRQDGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 740
++ AE P K E V+ +++ V AM GDGVNDAPA
Sbjct: 184 ---DDYF-------------------AEVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPA 220
Query: 741 LKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK-----AFIRY 794
L AD+G+A+G AGT+VA E +D+VL ++ + A V R Y+ + ++
Sbjct: 221 LAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHPQF 278
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-33
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 43/186 (23%)
Query: 614 YSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG 673
+ +++ + V ++ + DP + + I + + +GI ++++TGD+K TAEA+ +G+
Sbjct: 538 FMAVDGKTV--ALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI-- 593
Query: 674 AHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMT 731
K+ AE P K IV LK+ G +VAM
Sbjct: 594 ------------KKV-------------------VAEIMPEDKSRIVSELKDKGLIVAMA 622
Query: 732 GDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK-- 789
GDGVNDAPAL ADIG+AMG GT+VA E++ + L + I A S +N++
Sbjct: 623 GDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQN 681
Query: 790 ---AFI 792
AFI
Sbjct: 682 LFFAFI 687
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 3e-11
Identities = 68/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 118 VIFLILIVNAIVGIWQESNAE----KALEALKEIQSEQAT-VTRDGKKIPSLSAKELVPG 172
+ L+L +G E A A+ AL ++ E A + DG + +S + G
Sbjct: 194 ITTLVL-----LGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEE-EVSLDNVAVG 247
Query: 173 DIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVF 232
D++ ++ G+K+P D + S V++ +TGE V+K K V
Sbjct: 248 DLLRVRPGEKIPVDGEVQEGRSF---VDESMVTGEPIPVAKEA----------SAK--VI 292
Query: 233 AGTTVVNGTCTCLVTNTGMNTEIGKVHSQI----HEAS------QNEEDTPLKKKLNQFG 282
T G+ + G +T + ++I +A Q DT
Sbjct: 293 GATINQTGSFVMKALHVGSDT----MLARIVQMVSDAQRSRAPIQRLADT---------- 338
Query: 283 EVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIP-- 340
+ G V L+ V F+ W + P +Y AV++ + A P
Sbjct: 339 -----VSGWFVPAVILVAVLSFIVWALLGPQPA--------LSYGLIAAVSVLIIACPCA 385
Query: 341 EGL--PAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKL 398
GL P I G K AQ L++ ++E + + DKTGTLT +T++
Sbjct: 386 LGLATPMSIMV----GVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRI 441
Query: 399 VAVG 402
V
Sbjct: 442 VTDD 445
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 5e-33
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 37/169 (21%)
Query: 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQS 682
G++ + D +E + A+++ K GI+V +ITGDN +AEAI RE+ + + +
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----DLV---- 205
Query: 683 ITGKEFMDIHNQKNYLRQDGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 740
AE P K E V+ L+ VVA GDG+NDAPA
Sbjct: 206 -------------------------IAEVLPHQKSEEVKKLQAKE-VVAFVGDGINDAPA 239
Query: 741 LKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK 789
L AD+G+A+G +G++VA E+ D+VL D+ +VAA+ R + +K
Sbjct: 240 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 8e-32
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 44/186 (23%)
Query: 614 YSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG 673
+ R+ G++ + D +E + A+++ K GI+V +ITGDN +AEAI RE+ +
Sbjct: 441 IVARNGRVE--GIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-- 496
Query: 674 AHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMT 731
AE P K E V+ L+ VVA
Sbjct: 497 ------------DLV-------------------IAEVLPHQKSEEVKKLQAKE-VVAFV 524
Query: 732 GDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK-- 789
GDG+NDAPAL AD+G+A+G +G++VA E+ D+VL D+ +VAA+ R + +K
Sbjct: 525 GDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQN 583
Query: 790 ---AFI 792
A I
Sbjct: 584 IFWALI 589
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 72.9 bits (180), Expect = 2e-13
Identities = 76/310 (24%), Positives = 124/310 (40%), Gaps = 71/310 (22%)
Query: 117 LVIFLILIVNAIVGIWQESNAEK----ALEALKEIQSEQATVTRDGKKIPSLSAKELVPG 172
L++ +L +G E+ A+ A++ L +Q++ A V RDGK+I ++ +E+ G
Sbjct: 101 LLLAFLL-----LGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVG 154
Query: 173 DIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVF 232
DIV ++ G+K+P D ++ S V++ ++GE V K+ G + VF
Sbjct: 155 DIVIVRPGEKIPVDGVVVEGESY---VDESMISGEPVPVLKSK----------GDE--VF 199
Query: 233 AGTTVVNGTCTCLVTNTGMNTEIGKVHSQI----HEAS------QNEEDTPLKKKLNQFG 282
T G T G T + +QI +A Q D
Sbjct: 200 GATINNTGVLKIRATRVGGET----LLAQIVKLVEDAMGSKPPIQRLADK---------- 245
Query: 283 EVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIP-- 340
++ V L+ + F+ W Y F+ F +A+ V A P
Sbjct: 246 -----VVAYFIPTVLLVAISAFIYW-YFIA-HAPLLFA-------FTTLIAVLVVACPCA 291
Query: 341 EGL--PAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKL 398
GL P +T G K A+ L++ ++E T + DKTGTLT + VT L
Sbjct: 292 FGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDL 347
Query: 399 VAVGSRAGTL 408
V + L
Sbjct: 348 VPLNGDEREL 357
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-31
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 44/186 (23%)
Query: 614 YSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG 673
+ R+ G++ + D +E + A+++ K GI+V +ITGDN +AEAI RE+ +
Sbjct: 519 IVARNGRVE--GIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-- 574
Query: 674 AHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMT 731
AE P K E V+ L+ VVA
Sbjct: 575 ------------DLV-------------------IAEVLPHQKSEEVKKLQAKE-VVAFV 602
Query: 732 GDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK-- 789
GDG+NDAPAL AD+G+A+G +G++VA E+ D+VL D+ +VAA+ R + +K
Sbjct: 603 GDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQN 661
Query: 790 ---AFI 792
A I
Sbjct: 662 IFWALI 667
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 1e-14
Identities = 77/311 (24%), Positives = 126/311 (40%), Gaps = 72/311 (23%)
Query: 118 VIFLILIVNAIVGIWQESNAE----KALEALKEIQSEQATVTRDGKKIPSLSAKELVPGD 173
++ +L +G E+ A+ +A++ L +Q++ A V RDGK+I ++ +E+ GD
Sbjct: 180 LLAFLL-----LGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVGD 233
Query: 174 IVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFA 233
IV ++ G+K+P D ++ S V++ ++GE V K+ G + VF
Sbjct: 234 IVIVRPGEKIPVDGVVVEGESY---VDESMISGEPVPVLKSK----------GDE--VFG 278
Query: 234 GTTVVNGTCTCLVTNTGMNTEIGKVHSQI----HEAS------QNEEDTPLKKKLNQFGE 283
T G T G T + +QI +A Q D
Sbjct: 279 ATINNTGVLKIRATRVGGETLL----AQIVKLVEDAMGSKPPIQRLADK----------- 323
Query: 284 VLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIP--E 341
++ V L+ + F+ W Y F+ F +A+ V A P
Sbjct: 324 ----VVAYFIPTVLLVAISAFIYW-YFIA-HAPLLFA-------FTTLIAVLVVACPCAF 370
Query: 342 GL--PAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLV 399
GL P +T G K A+ L++ ++E T + DKTGTLT + VT LV
Sbjct: 371 GLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV 426
Query: 400 AV-GSRAGTLR 409
+ G LR
Sbjct: 427 PLNGDERELLR 437
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-26
Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 45/197 (22%)
Query: 438 QTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRC 497
+ + + + + N + A+ ++ +
Sbjct: 16 ERVLHSAWLNSHYQTGL-KN-------LLDTAVLEGTDEESARSLASR------------ 55
Query: 498 CQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVV 557
Q+ + FD +R+ M V+V ++ + +L+ KGA++ +L S V+ +G +V
Sbjct: 56 -------WQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIV 107
Query: 558 ELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSI 617
LD I + ++ LR + A K L E D
Sbjct: 108 PLDDIMLRKIKRVTDTLNRQGLRVVAVATK-YLPAREGDYQRAD---------------- 150
Query: 618 ESRLVFVGMVGLRDPPR 634
ES L+ G + D
Sbjct: 151 ESDLILEGYIAFLDHHH 167
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.4 bits (174), Expect = 9e-13
Identities = 105/694 (15%), Positives = 201/694 (28%), Gaps = 228/694 (32%)
Query: 48 VGEVKKRREIYGYNELEKHEGTSIFQLILEQF------NDT--LVRILLVAAVVSFVLAW 99
GE + Y Y + I + + F D + + +L + ++
Sbjct: 11 TGEHQ-----YQYKD--------ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS 57
Query: 100 YDGEEG-----------GEMEITAFVEPLVIFLILIVNA--IVGIWQESNAEKALEALKE 146
D G E + FVE + L +N ++ + + ++ +
Sbjct: 58 KDAVSGTLRLFWTLLSKQEEMVQKFVEEV-----LRINYKFLMSPIKTEQRQPSMMT-RM 111
Query: 147 IQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL-T 205
++ + D + + L P ++L+ LL L + + G L +
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQP--YLKLRQA--------LLELRPAKNVLIDGVLGS 161
Query: 206 GESEAVSKTVKTVPENSDIQGKKCMVFAGTTV--VN-GTCTC----LVTNTGMNTEIGKV 258
G KT + + + M F + +N C L + +I
Sbjct: 162 G------KTWVALDVCLSYKVQCKMDFK---IFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 259 HSQIHEASQNEEDTPLKKKLNQFGEVLTMII----GVICALVWLINVKYFLTWEYVDGWP 314
+ + S N +K +++ L ++ C LV L+NV+ W +
Sbjct: 213 WTSRSDHSSN-----IKLRIHSIQAELRRLLKSKPYENCLLV-LLNVQNAKAWNAFNL-- 264
Query: 315 RNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETL 374
C ++ T TR + L + +L
Sbjct: 265 --------SCK--------------------ILLT-----TRFKQVTDFLSAATTTHISL 291
Query: 375 GCTTVICSDKTGTLTTNQMAVTKLVA--VGSRAGTLRSFNVQGTTYNP----------SD 422
+ TLT +++ L+ + R L + T NP D
Sbjct: 292 -------DHHSMTLTPDEVK--SLLLKYLDCRPQDLPR---EVLTTNPRRLSIIAESIRD 339
Query: 423 G--RIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMG-F 479
G + W D L TI + S + P E + M +++ F
Sbjct: 340 GLATWDNWKHVNCDK-LTTIIESS---------------LNVLEPAE--YRKMFDRLSVF 381
Query: 480 PEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKK------- 532
P + P +L +W + + L S K+
Sbjct: 382 PPSAH-----IPTILL--SLIWFDVI-------KSDVMVVVNKLHKYSLVEKQPKESTIS 427
Query: 533 -----LLVKGAVEN-------LLERSSFVQLLDG---SVVELDQYS-------------- 563
L +K +EN +++ + + D LDQY
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487
Query: 564 ------RDLIL------QSLQEMSSTALRCLGFAYKD--DLREFETYDGDEDHPAHQLLL 609
R + L Q + STA G L+ ++ Y D + P ++ L+
Sbjct: 488 ERMTLFRMVFLDFRFLEQKI-RHDSTAWNASGSILNTLQQLKFYKPYICD-NDPKYERLV 545
Query: 610 NPTNYSSIESRLVFVGMVGLRDPPREEVRQAIED 643
N +I L + + + +R A+
Sbjct: 546 N-----AILDFLPKIEENLICSKYTDLLRIALMA 574
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 8e-09
Identities = 24/122 (19%), Positives = 37/122 (30%), Gaps = 15/122 (12%)
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG----VFGAHEDISSQSITGKE 687
RE R+ + I VI+G + I ++ H + I
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 688 FMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747
S K ++ L E + + M GD V D A KL+D+
Sbjct: 137 PHSCKGTC-----------SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 185
Query: 748 VA 749
A
Sbjct: 186 FA 187
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 2e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 140 ALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRV 199
A++ L +Q++ A V RDGK+I ++ +E+ GDIV ++ G+K+P D ++ S V
Sbjct: 2 AIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---V 57
Query: 200 EQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259
++ ++GE V K+ G + VF T G T G T +
Sbjct: 58 DESMISGEPVPVLKSK----------GDE--VFGATINNTGVLKIRATRVGGET----LL 101
Query: 260 SQI 262
+QI
Sbjct: 102 AQI 104
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 51.3 bits (124), Expect = 3e-07
Identities = 36/193 (18%), Positives = 63/193 (32%), Gaps = 59/193 (30%)
Query: 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-------------------- 674
E+ +AI ++ GI +M++TG+ AEA IG G
Sbjct: 23 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLAS 82
Query: 675 -----------------------HEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711
D + + +E +++ + + + L +
Sbjct: 83 MDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSG 142
Query: 712 R---------HKQE-IVRLLKEDG----EVVAMTGDGVNDAPALKLADIGVAMGIAGTEV 757
+K I + + G EV + GDG ND A K+ VA+ A +
Sbjct: 143 FAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV-GDGENDLDAFKVVGYKVAVAQAPKIL 201
Query: 758 AKEASDMVLADDN 770
KE +D V +
Sbjct: 202 -KENADYVTKKEY 213
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-06
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 24/128 (18%)
Query: 140 ALEALKEIQSEQATVTRDGKKIPSLSAKE-----LVPGDIVELKVGDKVPADMRLLRLTS 194
AL L +Q+ +AT+ LS ++ + GDI+++ G K P D R++ S
Sbjct: 8 ALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS 67
Query: 195 STVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTE 254
V++ +TGE+ V+K G V AG+ NG+ T+ G +T
Sbjct: 68 M---VDESLITGEAMPVAKKP----------GST--VIAGSINQNGSLLICATHVGADT- 111
Query: 255 IGKVHSQI 262
SQI
Sbjct: 112 ---TLSQI 116
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 1e-06
Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 28/159 (17%)
Query: 633 PREEVRQAIEDCKAAGIRVMVITGDN------KNTAEAICREIGVFGAHEDISSQSITGK 686
P+EEV+ C+ G+ + + N + I + +S + + K
Sbjct: 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNK 145
Query: 687 E------FMDIHNQKNYLRQDGGLLFSRAEPR---------HKQE-IVRLLKEDG----E 726
E F+ +K L R P KQ+ I +++ G E
Sbjct: 146 EVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEE 205
Query: 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMV 765
++ GDG ND L+ A IGVAMG A +V K A+D V
Sbjct: 206 TMSF-GDGGNDISMLRHAAIGVAMGQAKEDV-KAAADYV 242
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 4e-06
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 27/158 (17%)
Query: 633 PREEVRQAIEDCKAAGIRVMVITGD-----NKNTAEAICREIGVFGAHEDISSQSITGKE 687
RE+VR E+ G ++ + + + + AH + K+
Sbjct: 83 RREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKD 142
Query: 688 ------FMDIHNQKNYLRQDGGLLFSRAEPR---------HKQE-IVRLLKEDG----EV 727
F ++ Y+R F R K E I ++++ G +V
Sbjct: 143 IYQALLFCRAEEEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDV 202
Query: 728 VAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMV 765
A GDG+ND L GVAMG A EV K +D V
Sbjct: 203 YAF-GDGLNDIEMLSFVGTGVAMGNAHEEV-KRVADFV 238
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
E++ + GD ND P +L A T+ K SD V
Sbjct: 171 EILVI-GDSNNDMPMFQLPVRKACPANA-TDNIKAVSDFVSDYSY 213
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 19/126 (15%), Positives = 39/126 (30%), Gaps = 26/126 (20%)
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHE---DISSQSITGKEF 688
P E + + K +V+ +G + + A + + ++ G
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVT 134
Query: 689 MDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGVNDAPALKL 743
+ + K E++ +L+ + + GDG ND K
Sbjct: 135 GHMMFSHS-----------------KGEMLLVLQRLLNISKTNTLVV-GDGANDLSMFKH 176
Query: 744 ADIGVA 749
A I +A
Sbjct: 177 AHIKIA 182
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 3e-05
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMV 765
E++A GDG ND P LK A IGVAMG A +V + +D V
Sbjct: 212 EIMAC-GDGGNDIPMLKAAGIGVAMGNASEKV-QSVADFV 249
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG---VFGAHEDISSQSITGKEF 688
+ + KA G + +I+G + + F +I +T
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNIT 238
Query: 689 MDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748
+ I + + + + ++ L E + GDG ND P L+ A G+
Sbjct: 239 LPI-------------MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGI 285
Query: 749 A 749
A
Sbjct: 286 A 286
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 7e-05
Identities = 25/143 (17%), Positives = 53/143 (37%), Gaps = 28/143 (19%)
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHE---DISSQSITGKEF 688
P E+ + + A G +V + +G ++ + ++ + A +I S +TG+
Sbjct: 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVL 237
Query: 689 MDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGVNDAPALKL 743
++ + + K +I+ L + VA+ GDG ND +
Sbjct: 238 GEVVSAQT-----------------KADILLTLAQQYDVEIHNTVAV-GDGANDLVMMAA 279
Query: 744 ADIGVAMGIAGTEVAKEASDMVL 766
A +GVA + + +
Sbjct: 280 AGLGVAYH--AKPKVEAKAQTAV 300
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} Length = 274 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 7e-05
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
E + GDG ND + +D+ +AM + ++ K+ + + +D
Sbjct: 218 ETICF-GDGQNDIVMFQASDVTIAMKNSHQQL-KDIATSI-CEDI 259
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 8e-05
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
+V+ + GD ND L A+ A K + VL +
Sbjct: 242 QVLVV-GDAENDIAMLSNFKYSFAVANATDSA-KSHAKCVLPVSH 284
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
+V+ + GD ND +K A +GVAMG A EV KEA+ V N
Sbjct: 215 DVMTL-GDQGNDLTMIKYAGLGVAMGNAIDEV-KEAAQAV-TLTN 256
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 16/126 (12%)
Query: 627 VGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHE---DISSQSI 683
V + R + + G V++G + E + E+ + +I ++
Sbjct: 251 VAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTL 310
Query: 684 TGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 743
TG+ I + + +E + GDG ND L
Sbjct: 311 TGRVVGPI-------------IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAA 357
Query: 744 ADIGVA 749
A +G+A
Sbjct: 358 AGLGIA 363
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
+A GD ND L+ G + A E K +++ D
Sbjct: 229 RAIAF-GDSGNDVRMLQTVGNGYLLKNATQEA-KNLHNLI-TDSE 270
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
EV+A+ GDG ND +K A +GVAMG A V K+A+D + N
Sbjct: 215 EVIAI-GDGYNDLSMIKFAGMGVAMGNAQEPV-KKAADYI-TLTN 256
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 5e-04
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
E++A+ GD ND ++ A +GVA+ A V KE ++ V N
Sbjct: 216 EIMAI-GDQENDIAMIEYAGVGVAVDNAIPSV-KEVANFV-TKSN 257
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 5e-04
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDN 770
E+V GD ND + A + VAM A +V KEASD+V N
Sbjct: 208 EIVVF-GDNENDLFMFEEAGLRVAMENAIEKV-KEASDIV-TLTN 249
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 6e-04
Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 715 QEIVRLLKEDGEVVAMT-GDGVNDAPALKLADIGVAMGIAGTEVAKEASD 763
+ ++ K G++ + GD ND P ++ D +G + A+ S
Sbjct: 185 KILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSS 234
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} Length = 290 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 7e-04
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMV 765
+VVA+ G +D P ++LA +GVAMG A E+ K +D V
Sbjct: 220 DVVAI-GHQYDDLPMIELAGLGVAMGNAVPEI-KRKADWV 257
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 8e-04
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 714 KQEIVRLLKED---GEVVAMTGDGVNDAPALKLADIGVAMG--IAGTEVAKEA 761
K ++++LLKE +++ + GDG D A AD + G + +V A
Sbjct: 158 KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVIRQQVKDNA 209
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 817 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.92 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.94 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.93 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.9 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.8 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.64 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.43 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.35 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.33 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.33 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.3 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.3 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.29 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.28 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.26 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.21 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.21 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.2 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.19 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.19 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.18 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.18 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.13 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.12 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.03 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.01 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.99 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.98 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.91 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.91 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.9 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.9 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.88 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.86 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.84 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.84 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.8 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.8 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.77 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.77 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.75 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.75 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.74 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.73 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.7 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.69 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.68 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.67 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.61 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.56 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.56 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.55 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.54 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.54 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.51 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.5 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.45 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.42 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.41 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.35 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.34 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.33 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.33 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.32 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.31 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.31 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.3 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.3 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.29 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.26 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.22 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.21 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.19 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.19 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.18 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.17 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.16 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.15 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.14 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.13 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.13 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.13 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.12 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.11 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.11 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.11 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.08 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.05 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.05 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.04 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.02 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.0 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.99 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.98 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.97 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.96 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.94 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.92 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.92 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.89 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.86 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.83 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.83 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.83 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.76 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.75 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.72 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.67 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.65 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.64 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.6 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.44 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.43 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.42 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.4 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.37 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.35 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.31 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.22 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.18 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.18 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.17 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.16 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.96 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.84 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.78 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.6 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.5 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.22 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.2 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.19 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.18 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.15 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.88 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.86 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.79 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 95.66 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.44 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.16 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 94.33 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 93.75 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 92.6 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 92.35 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 91.11 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 90.98 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 90.27 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 86.96 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 86.21 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 85.76 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 84.96 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 83.84 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 83.23 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-116 Score=1064.99 Aligned_cols=762 Identities=49% Similarity=0.777 Sum_probs=627.1
Q ss_pred ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Q 003468 23 TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDG 102 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 102 (817)
|.+||..+++++++.|++++.+|||.+|+++|+++||+|+++.++++++|+++++||+++++++++++++++++++++..
T Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~ 81 (995)
T 3ar4_A 2 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE 81 (995)
T ss_dssp CTTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred cchhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 68999999999999999999999999999999999999999988888999999999999999999999999999886642
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCc--cceeeecCCccCCcEEEecCC
Q 003468 103 EEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGK--KIPSLSAKELVPGDIVELKVG 180 (817)
Q Consensus 103 ~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~--~~~~i~~~dLv~GDII~l~~G 180 (817)
. ...+..|+++++++++++++.++++|||+|+++++++|+++.+++++|+|+|+ . ++|+++||||||||.|++|
T Consensus 82 ~---~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~-~~I~~~~lv~GDiV~l~~G 157 (995)
T 3ar4_A 82 G---EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSV-QRIKARDIVPGDIVEVAVG 157 (995)
T ss_dssp S---SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSC-EEEEGGGCCTTCEEEEETT
T ss_pred c---ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceE-EEEEHHHCCCCCEEEECCC
Confidence 1 12345788899999999999999999999999999999999999999999987 5 8999999999999999999
Q ss_pred CcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhH
Q 003468 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259 (817)
Q Consensus 181 ~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~ 259 (817)
|+|||||+|++++++.|.||||+|||||.|+.|.+++.+ ++.+..+++|++|+||.+.+|++.++|++||.+|.+|+|.
T Consensus 158 d~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 237 (995)
T 3ar4_A 158 DKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIR 237 (995)
T ss_dssp CBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHH
T ss_pred CcccccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHH
Confidence 999999999877788999999999999999999987543 3345567789999999999999999999999999999999
Q ss_pred hHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhc
Q 003468 260 SQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAI 339 (817)
Q Consensus 260 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~i 339 (817)
+++.++ +.+++|+++++++++.+++++++++++++|+++...+........| +..+...|..++++++++|
T Consensus 238 ~~~~~~--~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ai~l~v~ai 308 (995)
T 3ar4_A 238 DQMAAT--EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW-------IRGAIYYFKIAVALAVAAI 308 (995)
T ss_dssp HHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCH-------HHHHHHHHHHHHHHHHHHS
T ss_pred HHhhcC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchH-------HHHHHHHHHHHHHHHHHhc
Confidence 999887 7789999999999999999888888887776543222110000011 2333456778899999999
Q ss_pred cCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCC---ccceeeecCC
Q 003468 340 PEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAG---TLRSFNVQGT 416 (817)
Q Consensus 340 P~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~---~~~~~~~~~~ 416 (817)
||+||+++++++++++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..++ ....+.+.+.
T Consensus 309 P~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 388 (995)
T 3ar4_A 309 PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGS 388 (995)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCS
T ss_pred CcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCC
Confidence 9999999999999999999999999999999999999999999999999999999999987643222 1122334444
Q ss_pred ccCCCCCcccC-CC-CCCCCHHHHHHHHHHhHhcCCeeee--cCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCch
Q 003468 417 TYNPSDGRIEG-WP-VGRMDANLQTIAKISAVCNDAGVEQ--SGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPE 492 (817)
Q Consensus 417 ~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~ 492 (817)
.++|....... .+ ....++.+..++.++++||++.++. .+..+...|+|+|.|++.++++.|+..... ......+
T Consensus 389 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~-~~i~~~~ 467 (995)
T 3ar4_A 389 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEV-RNLSKVE 467 (995)
T ss_dssp SSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCC-TTSCTTT
T ss_pred CcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccc-ccccccc
Confidence 55554322110 00 0123455678888999999987654 234566779999999999999888711000 0000011
Q ss_pred hhhhhhhhccccccceEeeccCCCCceEEEEEeecCC-----cEEEEEeCcchHHHhccccccccCCceeecCHHHHHHH
Q 003468 493 DVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSG-----NKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLI 567 (817)
Q Consensus 493 ~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~-----~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~ 567 (817)
....+....+..+++++++||+|+||||||+++..+| +..+|+|||||.|+++|+.... ++...++++..++.+
T Consensus 468 ~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~ 546 (995)
T 3ar4_A 468 RANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKI 546 (995)
T ss_dssp STTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHH
T ss_pred ccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHH
Confidence 1111111234467889999999999999999987665 6799999999999999987765 446788999999999
Q ss_pred HHHHHHH--HHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHH
Q 003468 568 LQSLQEM--SSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCK 645 (817)
Q Consensus 568 ~~~~~~~--~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~ 645 (817)
.+.+++| +++|+||+++|||++....... ...+...+..+|+|++|+|+++++|++||+++++|+.|+
T Consensus 547 ~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~----------~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~ 616 (995)
T 3ar4_A 547 LSVIKEWGTGRDTLRCLALATRDTPPKREEM----------VLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCR 616 (995)
T ss_dssp HHHHHHHHHSTTCCEEEEEEEESSCCCGGGC----------CTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHH
T ss_pred HHHHHHHHhhhccceEEEEEEEecCcccccc----------ccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHH
Confidence 9999999 9999999999999874311000 001122355678999999999999999999999999999
Q ss_pred HcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHH--HHhHhhccCCceEEEecCcccHHHHHHHHhc
Q 003468 646 AAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKE 723 (817)
Q Consensus 646 ~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~ 723 (817)
++||+++|+|||+..+|.++|+++|+...+..+....++|+++..+. +....+. +..+|+|++|++|.++|+.+++
T Consensus 617 ~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~--~~~v~~r~~P~~K~~~v~~l~~ 694 (995)
T 3ar4_A 617 DAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACR--RACCFARVEPSHKSKIVEYLQS 694 (995)
T ss_dssp HTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHH--HCCEEESCCSSHHHHHHHHHHT
T ss_pred HcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHh--hCcEEEEeCHHHHHHHHHHHHH
Confidence 99999999999999999999999999765433334567777776552 1222232 4579999999999999999999
Q ss_pred CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHH
Q 003468 724 DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHC 803 (817)
Q Consensus 724 ~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~ 803 (817)
.|+.|+|+|||.||+|||++||+||||| +|+++++++||+++.++++.++++++++||++|+||+|++.|.+++|+..+
T Consensus 695 ~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~ 773 (995)
T 3ar4_A 695 YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 773 (995)
T ss_dssp TTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 899999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhhcc
Q 003468 804 LSLELNLDK 812 (817)
Q Consensus 804 ~~~~~~~~~ 812 (817)
+.++++.+.
T Consensus 774 ~~~~~~~~~ 782 (995)
T 3ar4_A 774 VCIFLTAAL 782 (995)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 777665544
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-115 Score=1061.06 Aligned_cols=729 Identities=31% Similarity=0.449 Sum_probs=608.3
Q ss_pred ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Q 003468 23 TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDG 102 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 102 (817)
..+||..+++++++.|+|++..|||.+||++|+++||+|++++++.+++|+.+++||+++++++++++++++++.+.+..
T Consensus 50 ~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~ 129 (1034)
T 3ixz_A 50 EINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQA 129 (1034)
T ss_pred CcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhh
Confidence 45799999999999999999999999999999999999999998889999999999999999999999999988764432
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCc
Q 003468 103 EEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDK 182 (817)
Q Consensus 103 ~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~ 182 (817)
..+.......|+.+++|++++++++++++|||+|+++++++|+++.+++++|+|||++ ++|+++||||||||.|++||+
T Consensus 130 ~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~-~~I~~~eLv~GDiV~l~~Gd~ 208 (1034)
T 3ixz_A 130 SEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDK-FQINADQLVVGDLVEMKGGDR 208 (1034)
T ss_pred ccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEEEHHHCCCCcEEEEcCCce
Confidence 1111112235778888999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred ccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHh
Q 003468 183 VPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQI 262 (817)
Q Consensus 183 iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 262 (817)
|||||+|++ ++++.||||+|||||.|+.|.+++.. ....+.+|++|+||.+.+|++.++|++||.+|.+|+|++++
T Consensus 209 VPAD~~ll~--~~~l~VdES~LTGES~pv~K~~~~~~--~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~ 284 (1034)
T 3ixz_A 209 VPADIRILQ--AQGRKVDNSSLTGESEPQTRSPECTH--ESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLA 284 (1034)
T ss_pred ecCCeEEEE--eCCceEEecccCCCCCCeeccCCCcc--ccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhh
Confidence 999999997 46689999999999999999986532 22346789999999999999999999999999999999998
Q ss_pred hhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCc
Q 003468 263 HEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEG 342 (817)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~ 342 (817)
... +..++|+++.++++..+++.++++++++++++++... .. +...+..++++++++|||+
T Consensus 285 ~~~--~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~~i~l~v~~iPe~ 345 (1034)
T 3ixz_A 285 SGV--ENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG------YT-----------FLRAMVFFMAIVVAYVPEG 345 (1034)
T ss_pred ccc--ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ch-----------HHHHHHHHHHHHHheeccc
Confidence 877 7788999999999999988887777777766553321 11 2456778899999999999
Q ss_pred hHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCC
Q 003468 343 LPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSD 422 (817)
Q Consensus 343 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (817)
||+++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+... .. ..+..
T Consensus 346 Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~------~~-~~~~~ 418 (1034)
T 3ixz_A 346 LLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSAD------TT-EDQSG 418 (1034)
T ss_pred cHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCcccccc------Cc-ccccc
Confidence 999999999999999999999999999999999999999999999999999999999876432210 00 00000
Q ss_pred CcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCC-----eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhh
Q 003468 423 GRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGN-----HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRC 497 (817)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 497 (817)
............+..++++||++......+ .....|+|+|.|++.+++..+...
T Consensus 419 -----~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~---------------- 477 (1034)
T 3ixz_A 419 -----QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA---------------- 477 (1034)
T ss_pred -----cccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCCh----------------
Confidence 001123455667888899999886653221 345679999999999998766422
Q ss_pred hhhccccccceEeeccCCCCceEEEEEeec---CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHH
Q 003468 498 CQLWNTLEQRFATLEFDRDRKSMGVLVNSS---SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEM 574 (817)
Q Consensus 498 ~~~~~~~~~~l~~~~F~s~~k~msvvv~~~---~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (817)
...+..+.++.++||+|.||+|++++... +++..+++|||||.|+++|+.+.. +|...++++..++.+.+.+++|
T Consensus 478 -~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 555 (1034)
T 3ixz_A 478 -MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSL 555 (1034)
T ss_pred -HHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHHHHHHHHHH
Confidence 11234567889999999999999887653 367899999999999999998764 7788899999999999999999
Q ss_pred HHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEE
Q 003468 575 SSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVI 654 (817)
Q Consensus 575 ~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~ 654 (817)
+.+|+||+++|||.+........ ........+..|+||+|+|+++++||+|++++++|++|+++||+++|+
T Consensus 556 a~~G~RvLa~A~~~l~~~~~~~~---------~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmi 626 (1034)
T 3ixz_A 556 GGLGERVLGFCQLYLSEKDYPPG---------YAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626 (1034)
T ss_pred HhcCcHhheEeEEecChhhcccc---------cccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEE
Confidence 99999999999998754211000 001112233468999999999999999999999999999999999999
Q ss_pred CCCCHhhHHHHHHHhCCCCCCcc--------------------ccccccChhHHHHH--HHHhHhhccCCceEEEecCcc
Q 003468 655 TGDNKNTAEAICREIGVFGAHED--------------------ISSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 655 TGd~~~~a~~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~r~~p~ 712 (817)
|||+..+|.++|+++|+...+.. .....+++.++..+ .+....+......+|+|++|+
T Consensus 627 TGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~ 706 (1034)
T 3ixz_A 627 TGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQ 706 (1034)
T ss_pred eCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHH
Confidence 99999999999999999653211 11234556555544 222233333345799999999
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFI 792 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i 792 (817)
+|.++++.+++.|+.|+|+|||.||+|||++||+|||||.+|++.+|++||+|+.++++++|+.++++||++|+||+|++
T Consensus 707 ~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i 786 (1034)
T 3ixz_A 707 QKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSI 786 (1034)
T ss_pred HHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHhhhcccc
Q 003468 793 RYGFCHLENHCLSLELNLDKAI 814 (817)
Q Consensus 793 ~~~~~~n~~~~~~~~~~~~~~~ 814 (817)
.|.+++|+..+++.+++.+..+
T Consensus 787 ~~~l~~ni~~~~~~~~~~~~~~ 808 (1034)
T 3ixz_A 787 AYTLTKNIPELTPYLIYITVSV 808 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999988877766543
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-114 Score=1048.11 Aligned_cols=728 Identities=30% Similarity=0.461 Sum_probs=601.9
Q ss_pred ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Q 003468 23 TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDG 102 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 102 (817)
..+||..+++++++.|+|++.+|||.+|+++|+++||+|++++++.+++|+.+++||+++++++|+++++++++++.+..
T Consensus 45 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~ 124 (1028)
T 2zxe_A 45 SMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQA 124 (1028)
T ss_dssp CCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhc
Confidence 45899999999999999998899999999999999999999988889999999999999999999999999998765431
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCc
Q 003468 103 EEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDK 182 (817)
Q Consensus 103 ~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~ 182 (817)
..+.......|+.+++|+++++++.+++++||+|+++++++|+++.+.+++|+|+|++ ++|+++||||||||.|++||+
T Consensus 125 ~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~-~~I~~~~Lv~GDiV~l~~Gd~ 203 (1028)
T 2zxe_A 125 ATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEK-STINAEFVVAGDLVEVKGGDR 203 (1028)
T ss_dssp HSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEE-EEEEGGGCCTTCEEEEETTCB
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEE-EEEEHHHCCcCCEEEECCCCE
Confidence 0000001235778888999999999999999999999999999999999999999998 899999999999999999999
Q ss_pred ccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHh
Q 003468 183 VPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQI 262 (817)
Q Consensus 183 iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 262 (817)
|||||+|++ +..|.||||+|||||.|+.|.+++..++ +.+.+|++|+||.+.+|++.++|++||.+|.+|+|++++
T Consensus 204 IPaD~~ll~--g~~~~VdeS~LTGES~pv~K~~~~~~~~--~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~ 279 (1028)
T 2zxe_A 204 IPADLRIIS--AHGCKVDNSSLTGESEPQTRSPEFSSEN--PLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLA 279 (1028)
T ss_dssp CCSEEEEEE--EEEEEEECHHHHSCCSCEECCSSCCCSS--TTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHH
T ss_pred eeceEEEEe--eCcEEEEcCccCCCCcceecccCCCCCC--cccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhc
Confidence 999999997 3368999999999999999998754332 447789999999999999999999999999999999999
Q ss_pred hhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCc
Q 003468 263 HEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEG 342 (817)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~ 342 (817)
..+ +.+++|+++.+++++.+++.++++++++++++.+... ..| ...+.+++++++++|||+
T Consensus 280 ~~~--~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~------~~~-----------~~~~~~~i~llv~~iP~~ 340 (1028)
T 2zxe_A 280 SGL--EVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG------YSW-----------LEAVIFLIGIIVANVPEG 340 (1028)
T ss_dssp HHS--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------CCH-----------HHHHHHHHHHHHHHSCTT
T ss_pred cCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------CcH-----------HHHHHHHHHHHHHHcCch
Confidence 888 7789999999999999998888888777766643211 112 345667888999999999
Q ss_pred hHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCC
Q 003468 343 LPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSD 422 (817)
Q Consensus 343 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (817)
||+++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+. ..+. ..+..
T Consensus 341 Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~------~~~~-~~~~~ 413 (1028)
T 2zxe_A 341 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE------ADTT-ENQSG 413 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEE------CCCC-TTCCS
T ss_pred HHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeee------ccCC-CCccc
Confidence 9999999999999999999999999999999999999999999999999999999987642211 1000 00000
Q ss_pred CcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecC-Ce----eEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhh
Q 003468 423 GRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSG-NH----YVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRC 497 (817)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~----~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 497 (817)
......+.....++.++++||++.++... +| ....|+|+|.||+.+++..+...
T Consensus 414 -----~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~---------------- 472 (1028)
T 2zxe_A 414 -----AAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV---------------- 472 (1028)
T ss_dssp -----CCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH----------------
T ss_pred -----cccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCH----------------
Confidence 00012234556788889999988765322 22 23568999999999998764210
Q ss_pred hhhccccccceEeeccCCCCceEEEEEeec---CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHH
Q 003468 498 CQLWNTLEQRFATLEFDRDRKSMGVLVNSS---SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEM 574 (817)
Q Consensus 498 ~~~~~~~~~~l~~~~F~s~~k~msvvv~~~---~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (817)
...+..+.++.++||+|.||||+++++.. ++++.+++|||||.|+++|+... .+|...++++..++.+.+.+++|
T Consensus 473 -~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~ 550 (1028)
T 2zxe_A 473 -QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLEL 550 (1028)
T ss_dssp -HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHH
T ss_pred -HHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHH
Confidence 11233567889999999999999999863 46789999999999999998764 47788899999999999999999
Q ss_pred HHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEE
Q 003468 575 SSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVI 654 (817)
Q Consensus 575 ~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~ 654 (817)
+++|+||+++|||+++.+. +.... ..........|.|++|+|+++++||+||+++++|++|+++||+++|+
T Consensus 551 a~~G~RvL~~A~~~l~~~~--~~~~~-------~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~mi 621 (1028)
T 2zxe_A 551 GGLGERVLGFCHFALPEDK--YNEGY-------PFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMV 621 (1028)
T ss_dssp HHTTCEEEEEEEEECCSTT--SCTTC-------CCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred HhcCCEEEEEEEEecCccc--ccccc-------ccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEE
Confidence 9999999999999875421 11000 00111223457899999999999999999999999999999999999
Q ss_pred CCCCHhhHHHHHHHhCCCCCCccc--------------------cccccChhHHHHH--HHHhHhhccCCceEEEecCcc
Q 003468 655 TGDNKNTAEAICREIGVFGAHEDI--------------------SSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 655 TGd~~~~a~~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~r~~p~ 712 (817)
|||+..+|.++|+++|+...+... ...+++|+++..+ .+....+......+|+|++|+
T Consensus 622 TGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~ 701 (1028)
T 2zxe_A 622 TGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQ 701 (1028)
T ss_dssp CSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHH
T ss_pred CCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHH
Confidence 999999999999999997432110 1124455555433 111222222344699999999
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFI 792 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i 792 (817)
+|..+++.+++.|+.|+|+|||.||+|||++||||||||.+|++++|++||+|+.++++++|++++++||++|+||++++
T Consensus 702 ~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i 781 (1028)
T 2zxe_A 702 QKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSI 781 (1028)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999977999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHhhhccc
Q 003468 793 RYGFCHLENHCLSLELNLDKA 813 (817)
Q Consensus 793 ~~~~~~n~~~~~~~~~~~~~~ 813 (817)
.|.+++|+..+++.+++.+..
T Consensus 782 ~~~l~~n~~~~~~~~~~~~~~ 802 (1028)
T 2zxe_A 782 AYTLTSNIPEITPFLVFIIGN 802 (1028)
T ss_dssp HHHHHTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 999999999888777665544
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-107 Score=964.21 Aligned_cols=631 Identities=28% Similarity=0.433 Sum_probs=529.7
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhh
Q 003468 34 CEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAF 113 (817)
Q Consensus 34 ~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (817)
+.+.|++++.+|||.+|+++|+++||+|+++.++ .++|+.|+++|+++++++++++++++++++ .|
T Consensus 76 ~~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------------~~ 141 (920)
T 1mhs_A 76 PEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------------DW 141 (920)
T ss_dssp SSTTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------------CS
T ss_pred HHHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hH
Confidence 4556888888999999999999999999998654 678899999999999999999988776542 56
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeec
Q 003468 114 VEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLT 193 (817)
Q Consensus 114 ~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~ 193 (817)
.++++|+++++++.+++++||+++++++++|+++.+.+++|+|||++ ++|++++|||||||.|++||+|||||+|+++
T Consensus 142 ~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~-~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g- 219 (920)
T 1mhs_A 142 VDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTL-KEIEAPEVVPGDILQVEEGTIIPADGRIVTD- 219 (920)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSE-EECCTTTSCTTSEEEECTTCBCSSEEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEE-EEEEHHHcCCCCEEEeCCCCccccceEEEec-
Confidence 67778888889999999999999999999999999999999999998 8999999999999999999999999999973
Q ss_pred CCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCCh
Q 003468 194 SSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTP 273 (817)
Q Consensus 194 ~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~ 273 (817)
++.+.||||+|||||.|+.|.++ +++|+||.+.+|++.++|++||.+|.+|+|.++++++ ...++|
T Consensus 220 ~~~l~VDES~LTGES~PV~K~~g------------d~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a--~~~~~~ 285 (920)
T 1mhs_A 220 DAFLQVDQSALTGESLAVDKHKG------------DQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAA--SGGSGH 285 (920)
T ss_dssp SSCCEEBCTTTSSCCCCEECCSS------------CEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCC--CCCCCH
T ss_pred CceeeeeccccCCCCcceEecCC------------CeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhc--ccCCch
Confidence 22479999999999999999976 6899999999999999999999999999999988877 667899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHh
Q 003468 274 LKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLAL 353 (817)
Q Consensus 274 l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~ 353 (817)
+++.++++..+++++++++++++|++++. .+ ..+...|.+++++++++|||+||++++++++.
T Consensus 286 l~~~~~~i~~~l~~~~~~~~~i~~~~~~~--------~~---------~~~~~~l~~av~llV~aiP~aLp~~vti~la~ 348 (920)
T 1mhs_A 286 FTEVLNGIGTILLILVIFTLLIVWVSSFY--------RS---------NPIVQILEFTLAITIIGVPVGLPAVVTTTMAV 348 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTT--------TT---------CCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cC---------CcHHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 99999999988887776666655543211 11 01245677889999999999999999999999
Q ss_pred HHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCC
Q 003468 354 GTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRM 433 (817)
Q Consensus 354 ~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (817)
++.+|+|+|+++|+++++|+||++++||||||||||+|+|+|.+++..+ .+++
T Consensus 349 g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~--------------g~~~------------- 401 (920)
T 1mhs_A 349 GAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA--------------GVDP------------- 401 (920)
T ss_dssp HHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCS--------------CCCC-------------
T ss_pred HHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecC--------------CCCH-------------
Confidence 9999999999999999999999999999999999999999998876432 0111
Q ss_pred CHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeecc
Q 003468 434 DANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEF 513 (817)
Q Consensus 434 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F 513 (817)
+ .++.++++|++... . .+||+|.|++.++.+.+... .....+.++..+||
T Consensus 402 ~----~ll~~a~l~~~~~~---~-----~~~P~e~Al~~~~~~~~~~~------------------~~~~~~~~~~~~pF 451 (920)
T 1mhs_A 402 E----DLMLTACLAASRKK---K-----GIDAIDKAFLKSLKYYPRAK------------------SVLSKYKVLQFHPF 451 (920)
T ss_dssp T----HHHHHHHHSCCCSS---C-----SCCSHHHHHHHHHHHSSSCC------------------GGGSCCCEEEEEEE
T ss_pred H----HHHHHHHHhcCCcc---c-----CCChHHHHHHHHHHhcccch------------------hhccccceeEEeec
Confidence 1 23345567765321 0 14899999999987755311 01234667899999
Q ss_pred CCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccc
Q 003468 514 DRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREF 593 (817)
Q Consensus 514 ~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~ 593 (817)
+|.+|+|+++++..+|+..+++|||||.++++|+. ..++++..++.+.+.+++|+.+|+||+++|++..
T Consensus 452 ~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~---- 520 (920)
T 1mhs_A 452 DPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG---- 520 (920)
T ss_dssp ETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS----
T ss_pred cCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc-------cCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc----
Confidence 99999999999877788889999999999999973 2346777788889999999999999999998731
Q ss_pred cccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC
Q 003468 594 ETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG 673 (817)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 673 (817)
|.+++|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|+++|+..
T Consensus 521 ------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~ 576 (920)
T 1mhs_A 521 ------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGT 576 (920)
T ss_dssp ------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred ------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCc
Confidence 45788999999999999999999999999999999999999999999999999963
Q ss_pred CCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCC
Q 003468 674 AHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIA 753 (817)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~ 753 (817)
...+-....++|.+...-.+....+ .+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| +
T Consensus 577 ~~~~~~~~~~~g~~~~~~~el~~~~--~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~ 653 (920)
T 1mhs_A 577 NIYNAERLGLGGGGDMPGSEVYDFV--EAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-G 653 (920)
T ss_dssp SCCCSSSSSSCBCCCGGGGGGGTTT--TTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-T
T ss_pred cccCccceeecCcccCCHHHHHHHH--hhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-c
Confidence 2100001122222000000111112 245689999999999999999999999999999999999999999999999 7
Q ss_pred ccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHH
Q 003468 754 GTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSL 806 (817)
Q Consensus 754 ~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 806 (817)
|++++|++||+++.++++++|++++++||++|+||++++.|.++.|+...+.+
T Consensus 654 gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~ 706 (920)
T 1mhs_A 654 SSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFL 706 (920)
T ss_dssp SCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999864433
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-107 Score=963.28 Aligned_cols=649 Identities=29% Similarity=0.408 Sum_probs=528.2
Q ss_pred ccccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 003468 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWY 100 (817)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 100 (817)
.+-.++|..+.+++++.|+++ .+|||.+|+++|+++||+|+++.++ .++|+.++++|++|++++|+++++++++++..
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~ 86 (885)
T 3b8c_A 9 NETVDLEKIPIEEVFQQLKCS-REGLTTQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANG 86 (885)
T ss_dssp ---CCCSSSSTTCCTTTSSSC-SSCSTHHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCC
T ss_pred hcchhhHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344689999999999999998 6899999999999999999998766 67788899999999999999999988876532
Q ss_pred cCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCC
Q 003468 101 DGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180 (817)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G 180 (817)
.+ ....|.+++.|+++++++.++++++|+|+++++++|+++.+++++|+|||++ ++|+++||||||||.|++|
T Consensus 87 ~~------~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~-~~I~~~~Lv~GDiV~l~~G 159 (885)
T 3b8c_A 87 DG------RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKW-SEQEAAILVPGDIVSIKLG 159 (885)
T ss_dssp TT------SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCS-CCCCTTTTCTTSBCCCCSS
T ss_pred cc------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEE-EEEEHHHCCCCCEEEECCC
Confidence 21 1225777888888889999999999999999999999998999999999998 8999999999999999999
Q ss_pred CcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHh
Q 003468 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHS 260 (817)
Q Consensus 181 ~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 260 (817)
|+|||||+|++ +..+.||||+|||||.|+.|.++ +++|+||.+.+|++.++|++||.+|.+|+|.+
T Consensus 160 d~IPaDg~ll~--g~~l~VdES~LTGES~Pv~K~~g------------~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~ 225 (885)
T 3b8c_A 160 DIIPADARLLE--GDPLKVDQSALTGESLPVTKHPG------------QEVFSGSTCKQGEIEAVVIATGVHTFFGKAAH 225 (885)
T ss_dssp CCCSSCCCCCC--SSCBCCCCCSTTCCSSCCCBSSC------------CCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCC
T ss_pred CEEeeceEEEE--cCcccccccccCCCCcceEecCC------------CccccCeEEeeeEEEEEEEEcCcccHHHHHHH
Confidence 99999999996 33578999999999999999976 57999999999999999999999999999998
Q ss_pred HhhhhccCCCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhc
Q 003468 261 QIHEASQNEEDTPLKKKLNQFGEVLTMIIGV-ICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAI 339 (817)
Q Consensus 261 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~i 339 (817)
+++. ...++|+++.+++++.+++.++++ +++++++++ +. ...+| ...+..++++++++|
T Consensus 226 lv~~---~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~---~~---~~~~~-----------~~~~~~~v~llv~ai 285 (885)
T 3b8c_A 226 LVDS---TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMY---PI---QRRKY-----------RDGIDNLLVLLIGGI 285 (885)
T ss_dssp SCCS---CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTT---TT---TCSCS-----------TTHHHHHHHHTTTTC
T ss_pred HHhc---ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH---ccCcH-----------HHHHHHHHHHHHHHh
Confidence 7765 356899999999988764432222 222211111 00 00122 234677899999999
Q ss_pred cCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccC
Q 003468 340 PEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYN 419 (817)
Q Consensus 340 P~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 419 (817)
||+||+++++++++++.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+.. . +.
T Consensus 286 P~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~-----------~----~~ 350 (885)
T 3b8c_A 286 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE-----------V----FC 350 (885)
T ss_dssp CSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC-----------S----SC
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe-----------c----cC
Confidence 99999999999999999999999999999999999999999999999999999998642210 0 00
Q ss_pred CCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhh
Q 003468 420 PSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQ 499 (817)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 499 (817)
. ......++.++++|+... .+||+|.|++.++.+..
T Consensus 351 ~-------------~~~~~~ll~~aa~~~~~~----------~~~p~~~Al~~~~~~~~--------------------- 386 (885)
T 3b8c_A 351 K-------------GVEKDQVLLFAAMASRVE----------NQDAIDAAMVGMLADPK--------------------- 386 (885)
T ss_dssp S-------------STTHHHHHHHHHHHCCSS----------SCCSHHHHHHHTTCCTT---------------------
T ss_pred C-------------CCCHHHHHHHHHHHhCCC----------CCCchHHHHHHHhhchh---------------------
Confidence 0 001234556667787531 37899999998653200
Q ss_pred hccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhh
Q 003468 500 LWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTAL 579 (817)
Q Consensus 500 ~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 579 (817)
..+..+++++.+||+|.+|+|+++++..+|+..+++|||||.++++|+. ++..++.+.+.+++++++|+
T Consensus 387 ~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~a~~G~ 455 (885)
T 3b8c_A 387 EARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA-----------SNDLSKKVLSIIDKYAERGL 455 (885)
T ss_dssp CCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC-----------CSTTTTTHHHHHHHHTTTTC
T ss_pred hHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccC-----------chhhHHHHHHHHHHHHhCCC
Confidence 0112355778899999999999998866777889999999999999962 11122346778889999999
Q ss_pred ceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCH
Q 003468 580 RCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNK 659 (817)
Q Consensus 580 r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~ 659 (817)
|++++|+++++.. ..+..|++++|+|+++++||+||+++++|++|+++||+++|+|||+.
T Consensus 456 rvl~vA~~~~~~~--------------------~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~ 515 (885)
T 3b8c_A 456 RSLAVARQVVPEK--------------------TKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 515 (885)
T ss_dssp EEEEECCBCCCSS--------------------SSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCH
T ss_pred eEEEEEEeccccc--------------------cccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCCh
Confidence 9999999876431 01234788999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCccccccccChhHHHH-H--HHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCcc
Q 003468 660 NTAEAICREIGVFGAHEDISSQSITGKEFMD-I--HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVN 736 (817)
Q Consensus 660 ~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~N 736 (817)
.+|.++|+++|+.... +....++|.+++. + .+....+. +..+|+|++|+||.++|+.+|+.|+.|+|+|||.|
T Consensus 516 ~tA~~iA~~lGi~~~~--~~~~~l~g~~~~~~~~~~~l~~~~~--~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvN 591 (885)
T 3b8c_A 516 AIGKETGRRLGMGTNM--YPSSALLGTHKDANLASIPVEELIE--KADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVN 591 (885)
T ss_dssp HHHTHHHHTTTCTTCC--STTSSCCBGGGGTTSCCSCHHHHHH--TSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSST
T ss_pred HHHHHHHHHhCCcccc--CCcceeeccccccccchhHHHHHHh--hCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCch
Confidence 9999999999996421 1112333433322 0 00011122 34689999999999999999999999999999999
Q ss_pred CHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHH
Q 003468 737 DAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLE 807 (817)
Q Consensus 737 D~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 807 (817)
|+|||++|||||||| +|++++|++||+++.++++++|++++++||++|+||++++.|++++|+..++.++
T Consensus 592 DapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~ 661 (885)
T 3b8c_A 592 DAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 661 (885)
T ss_dssp THHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTH
T ss_pred hHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 7999999999999999999999999999999999999999999999986544433
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-82 Score=735.33 Aligned_cols=510 Identities=23% Similarity=0.359 Sum_probs=434.0
Q ss_pred hhhhHH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEec-CCccceeeecCCccCCcEEEecCCCcccccEEE
Q 003468 112 AFVEPL-VIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRL 189 (817)
Q Consensus 112 ~~~~~~-~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~l 189 (817)
.|+++. +++++++++.+++.+.+.|+++++++|.++.|.+++|+| +|++ ++|++++|+|||+|.|++||+|||||+|
T Consensus 186 ~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~-~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 186 VYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSE-EEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEE-EEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEE-EEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 466655 566788888899999999999999999999999999887 8888 8999999999999999999999999999
Q ss_pred EeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCC
Q 003468 190 LRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNE 269 (817)
Q Consensus 190 l~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 269 (817)
++ |.+.||||+|||||.|+.|.++ +.+|+||.+.+|++.++|++||.+|.+|+|.+++.++ +.
T Consensus 265 l~---G~~~VDES~LTGES~Pv~K~~g------------d~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a--~~ 327 (736)
T 3rfu_A 265 QE---GRSFVDESMVTGEPIPVAKEAS------------AKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDA--QR 327 (736)
T ss_dssp CS---SCEEEECSSSTTCSSCEEECTT------------CEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHH--HS
T ss_pred EE---CceEeeecccCCccccEEeccC------------CcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHh--hh
Confidence 94 7789999999999999999986 5699999999999999999999999999999999998 77
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHH
Q 003468 270 EDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITT 349 (817)
Q Consensus 270 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~ 349 (817)
.++|+++.+++++.++++++++++++.+++|+.+... ..| ...+..++++++++|||+|++++|+
T Consensus 328 ~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~----~~~-----------~~~l~~ai~vlviacPcaL~la~p~ 392 (736)
T 3rfu_A 328 SRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQ----PAL-----------SYGLIAAVSVLIIACPCALGLATPM 392 (736)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS----SST-----------THHHHHHHHHHHHHCCSTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----chH-----------HHHHHHHHHhHHHhhhhHHHHHHHH
Confidence 8899999999999999999999888888776543210 012 3467889999999999999999999
Q ss_pred HHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCC
Q 003468 350 CLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWP 429 (817)
Q Consensus 350 ~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (817)
++..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 393 a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~-------------------------- 446 (736)
T 3rfu_A 393 SIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF-------------------------- 446 (736)
T ss_dssp HHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS--------------------------
T ss_pred HHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCC--------------------------
Confidence 999999999999999999999999999999999999999999999999873210
Q ss_pred CCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceE
Q 003468 430 VGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFA 509 (817)
Q Consensus 430 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 509 (817)
....+..+ +.+++.. +.||.+.|++++++..|+... .
T Consensus 447 ---~~~~~l~~--aa~le~~------------s~hPla~Aiv~~a~~~~~~~~--------------------------~ 483 (736)
T 3rfu_A 447 ---VEDNALAL--AAALEHQ------------SEHPLANAIVHAAKEKGLSLG--------------------------S 483 (736)
T ss_dssp ---CHHHHHHH--HHHHHHS------------SCCHHHHHHHHHHHTTCCCCC--------------------------C
T ss_pred ---CHHHHHHH--HHHHhhc------------CCChHHHHHHHHHHhcCCCcc--------------------------C
Confidence 01112222 2223222 368999999999987765321 1
Q ss_pred eeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecc
Q 003468 510 TLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDD 589 (817)
Q Consensus 510 ~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~ 589 (817)
..+|++.+++. +... .++. .+.+|+++.+.+.+.. ...+.+..++++.+|+|++.+|+
T Consensus 484 ~~~f~~~~g~g-v~~~-~~g~--~~~~G~~~~~~~~~~~---------------~~~~~~~~~~~~~~G~~vl~va~--- 541 (736)
T 3rfu_A 484 VEAFEAPTGKG-VVGQ-VDGH--HVAIGNARLMQEHGGD---------------NAPLFEKADELRGKGASVMFMAV--- 541 (736)
T ss_dssp CSCCCCCTTTE-EEEC-SSSS--CEEEESHHHHHHHCCC---------------CHHHHHHHHHHHHTTCEEEEEEE---
T ss_pred cccccccCCce-EEEE-ECCE--EEEEcCHHHHHHcCCC---------------hhHHHHHHHHHHhcCCeEEEEEE---
Confidence 22455544432 2222 2232 3567999877654321 02355677889999999999985
Q ss_pred cccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh
Q 003468 590 LREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI 669 (817)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 669 (817)
|..++|+++++|++|++++++|++|+++|++++|+|||+..++..+|+++
T Consensus 542 ------------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~l 591 (736)
T 3rfu_A 542 ------------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTL 591 (736)
T ss_dssp ------------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHH
T ss_pred ------------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 24689999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 670 GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 670 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+.. ++++++|++|.++++.+++.++.|+|+|||.||+|||++||||||
T Consensus 592 gi~~-------------------------------v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIA 640 (736)
T 3rfu_A 592 GIKK-------------------------------VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIA 640 (736)
T ss_dssp TCCC-------------------------------EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEE
T ss_pred CCCE-------------------------------EEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEE
Confidence 9952 788999999999999999999999999999999999999999999
Q ss_pred eCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHH
Q 003468 750 MGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLE 807 (817)
Q Consensus 750 mg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 807 (817)
|| +|++.++++||+++.+++++++++++++||++++||++++.|.|.+|+..+...+
T Consensus 641 mg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 641 MG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp ES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 7999999999999999999999999999999999999999999999998765544
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-79 Score=710.40 Aligned_cols=506 Identities=25% Similarity=0.360 Sum_probs=423.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEee
Q 003468 113 FVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRL 192 (817)
Q Consensus 113 ~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~ 192 (817)
|..+++++++++++.+++.+.+.|+++.++++.++.|++++|+|+|++ ++|+++||+|||+|.|++||+|||||+|++
T Consensus 96 ~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~-~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~- 173 (645)
T 3j08_A 96 YETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKE-IAVPVEEVAVGDIVIVRPGEKIPVDGVVVE- 173 (645)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEE-EEEEGGGCCTTCEEEECTTCBCCSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEeeEEEEEE-
Confidence 334566667777788888888888888999999999999999999998 899999999999999999999999999995
Q ss_pred cCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCC
Q 003468 193 TSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDT 272 (817)
Q Consensus 193 ~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~ 272 (817)
|.+.||||+|||||.|+.|.++ +.+|+||.+.+|++.++|++||.+|.+|+|.++++++ +.+++
T Consensus 174 --G~~~VdeS~LTGES~Pv~K~~g------------~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a--~~~k~ 237 (645)
T 3j08_A 174 --GESYVDESMISGEPVPVLKSKG------------DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA--MGSKP 237 (645)
T ss_dssp --CCEEEECHHHHCCSSCEEECTT------------CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCC--CCCCC
T ss_pred --CcEEEEcccccCCCCceecCCC------------CEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHh--hccCC
Confidence 6789999999999999999986 6799999999999999999999999999999999888 77889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHH
Q 003468 273 PLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLA 352 (817)
Q Consensus 273 ~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~ 352 (817)
|+++.+++++.++++++++++++.+++|+.... .+| ...+..++++++++|||+|++++|+++.
T Consensus 238 ~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~-----~~~-----------~~~~~~~i~vlvia~P~aL~la~p~a~~ 301 (645)
T 3j08_A 238 PIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH-----APL-----------LFAFTTLIAVLVVACPCAFGLATPTALT 301 (645)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS-----CSC-----------CCTTTTTHHHHHHHSCTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CcH-----------HHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999998888888777665422110 111 1124567889999999999999999999
Q ss_pred hHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCC
Q 003468 353 LGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGR 432 (817)
Q Consensus 353 ~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (817)
.+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 302 ~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------------------------- 352 (645)
T 3j08_A 302 VGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------------------------- 352 (645)
T ss_dssp HHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS-----------------------------
T ss_pred HHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCC-----------------------------
Confidence 999999999999999999999999999999999999999999999986431
Q ss_pred CCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeec
Q 003468 433 MDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLE 512 (817)
Q Consensus 433 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 512 (817)
.. ..++.+++.+... +.||.+.|++.+++..|+..... + .....+
T Consensus 353 ~~---~~~l~~aa~~e~~-----------s~hPla~Aiv~~a~~~g~~~~~~-------~--------------~~~~~~ 397 (645)
T 3j08_A 353 DE---RELLRLAAIAERR-----------SEHPIAEAIVKKALEHGIELGEP-------E--------------KVEVIA 397 (645)
T ss_dssp CH---HHHHHHHHHHHTT-----------CCSHHHHHHHHHHHHTTCCCCSC-------C--------------CCEEET
T ss_pred CH---HHHHHHHHHHhhc-----------CCChhHHHHHHHHHhcCCCcCCc-------c--------------ceEEec
Confidence 01 1223333333221 36899999999999887643211 0 000111
Q ss_pred cCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccccc
Q 003468 513 FDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLRE 592 (817)
Q Consensus 513 F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~ 592 (817)
.+.... ..+++|+++.+.+... +.. +.+.+..++++.+|+|++.+|+
T Consensus 398 ----g~g~~~---------~~v~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~l~va~------ 444 (645)
T 3j08_A 398 ----GEGVVA---------DGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVAR------ 444 (645)
T ss_dssp ----TTEEEE---------TTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTCCCEEEEE------
T ss_pred ----CCceEE---------EEEEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcCCeEEEEEE------
Confidence 011110 1255687776654321 111 3456777889999999999985
Q ss_pred ccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 593 FETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
|++++|+++++|++||+++++|++|+++|++++|+|||+..++..+++++|+.
T Consensus 445 ---------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~ 497 (645)
T 3j08_A 445 ---------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 497 (645)
T ss_dssp ---------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred ---------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 35699999999999999999999999999999999999999999999999994
Q ss_pred CCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC
Q 003468 673 GAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI 752 (817)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~ 752 (817)
.++++..|++|.++++.+++. +.|+|+|||.||+|||+.||+|||||
T Consensus 498 -------------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg- 544 (645)
T 3j08_A 498 -------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG- 544 (645)
T ss_dssp -------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-
T ss_pred -------------------------------EEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-
Confidence 378899999999999999998 89999999999999999999999999
Q ss_pred CccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhh
Q 003468 753 AGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELN 809 (817)
Q Consensus 753 ~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 809 (817)
+|++.++++||+++.+++++++.+++++||++++||++++.|.+++|+..+...+++
T Consensus 545 ~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~ 601 (645)
T 3j08_A 545 SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGL 601 (645)
T ss_dssp CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999866555444
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-79 Score=716.07 Aligned_cols=506 Identities=25% Similarity=0.358 Sum_probs=424.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEee
Q 003468 113 FVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRL 192 (817)
Q Consensus 113 ~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~ 192 (817)
|..+++++++++++.+++.+.+.|+++.+++|.++.|..++|+|+|++ ++|+++||+|||+|.|++||+|||||+|++
T Consensus 174 ~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~-~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~- 251 (723)
T 3j09_A 174 YETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKE-IAVPVEEVAVGDIVIVRPGEKIPVDGVVVE- 251 (723)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEE-EEEEGGGCCTTCEEEECTTCBCCSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEE-EEEEHHHCCCCCEEEECCCCEEeeEEEEEE-
Confidence 334556667777788888888888888999999999999999999998 899999999999999999999999999995
Q ss_pred cCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCC
Q 003468 193 TSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDT 272 (817)
Q Consensus 193 ~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~ 272 (817)
|.+.||||+|||||.|+.|.++ +.+|+||.+.+|.+.++|++||.+|.+|+|.++++++ +.+++
T Consensus 252 --G~~~VdeS~LTGES~pv~K~~g------------~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a--~~~k~ 315 (723)
T 3j09_A 252 --GESYVDESMISGEPVPVLKSKG------------DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA--MGSKP 315 (723)
T ss_dssp --CCEEEECHHHHCCSSCEEECTT------------CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSS--CCSCC
T ss_pred --CCeEEecccccCCCcceeecCC------------CeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHh--hccCC
Confidence 6789999999999999999986 6799999999999999999999999999999999988 77889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHH
Q 003468 273 PLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLA 352 (817)
Q Consensus 273 ~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~ 352 (817)
|+++.+++++.++++++++++++.+++|+.... .+| ...+..++++++++|||+|++++|+++.
T Consensus 316 ~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~-----~~~-----------~~~~~~~i~vlvia~P~aL~la~p~a~~ 379 (723)
T 3j09_A 316 PIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH-----APL-----------LFAFTTLIAVLVVACPCAFGLATPTALT 379 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTT-----CTT-----------CCSHHHHHHHHHHHSCTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CcH-----------HHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 999999999999998888888777655322110 111 2246678999999999999999999999
Q ss_pred hHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCC
Q 003468 353 LGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGR 432 (817)
Q Consensus 353 ~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (817)
.+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 380 ~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~----------------------------- 430 (723)
T 3j09_A 380 VGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------------------------- 430 (723)
T ss_dssp HHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS-----------------------------
T ss_pred HHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCC-----------------------------
Confidence 999999999999999999999999999999999999999999999986431
Q ss_pred CCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeec
Q 003468 433 MDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLE 512 (817)
Q Consensus 433 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 512 (817)
... .++..++.+... +.||.+.|++++++..|+..... . .....+
T Consensus 431 ~~~---~~l~~aa~~e~~-----------s~hP~~~Ai~~~a~~~~~~~~~~-------~--------------~~~~~~ 475 (723)
T 3j09_A 431 DER---ELLRLAAIAERR-----------SEHPIAEAIVKKALEHGIELGEP-------E--------------KVEVIA 475 (723)
T ss_dssp CHH---HHHHHHHHHHTT-----------CCSHHHHHHHHHHHHTTCCCCSC-------C--------------CCEEET
T ss_pred CHH---HHHHHHHHHhcc-----------CCCchhHHHHHHHHhcCCCcCCc-------c--------------ceEEec
Confidence 011 222333333221 36899999999999887643211 0 000111
Q ss_pred cCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccccc
Q 003468 513 FDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLRE 592 (817)
Q Consensus 513 F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~ 592 (817)
.+.... ..+.+|+++.+.+... +.. +.+.+..++++.+|+|++.+|+
T Consensus 476 ----g~g~~~---------~~~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~~~va~------ 522 (723)
T 3j09_A 476 ----GEGVVA---------DGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVAR------ 522 (723)
T ss_dssp ----TTEEEE---------TTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTCEEEEEEE------
T ss_pred ----CCceEE---------EEEEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcCCeEEEEEE------
Confidence 011110 1255687776654321 111 3466778889999999999985
Q ss_pred ccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 593 FETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
|++++|+++++|++||+++++|++|+++|++++|+|||+..++..+|+++|+.
T Consensus 523 ---------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~ 575 (723)
T 3j09_A 523 ---------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 575 (723)
T ss_dssp ---------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred ---------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc
Confidence 35799999999999999999999999999999999999999999999999994
Q ss_pred CCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC
Q 003468 673 GAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI 752 (817)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~ 752 (817)
.++++.+|++|.++++.+++. +.|+|+|||.||+|||+.||+|||||
T Consensus 576 -------------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg- 622 (723)
T 3j09_A 576 -------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG- 622 (723)
T ss_dssp -------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-
T ss_pred -------------------------------EEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-
Confidence 378999999999999999988 89999999999999999999999999
Q ss_pred CccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhh
Q 003468 753 AGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELN 809 (817)
Q Consensus 753 ~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 809 (817)
+|++.++++||+++.+++++++..++++||++|+||++++.|.|++|+..+...+++
T Consensus 623 ~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~ 679 (723)
T 3j09_A 623 SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGL 679 (723)
T ss_dssp CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999866655544
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-30 Score=268.00 Aligned_cols=139 Identities=29% Similarity=0.605 Sum_probs=128.7
Q ss_pred eEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhcc
Q 003468 621 LVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQ 700 (817)
Q Consensus 621 l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (817)
-.+.|.+.+.|+++|++.++++.|+++|++++|+||++...+..+++.+|+..
T Consensus 125 ~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------- 177 (263)
T 2yj3_A 125 GEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE--------------------------- 177 (263)
Confidence 35889999999999999999999999999999999999999999999999842
Q ss_pred CCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
+|....|+.|..+++.++..++.|+|||||.||++|++.||+||+|| ++++.+++.||+++.++++..+..+++.
T Consensus 178 ----~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~ 252 (263)
T 2yj3_A 178 ----YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKN 252 (263)
Confidence 34556699999999999999999999999999999999999999999 6888889999999988899999999999
Q ss_pred hHHHHHhHHHH
Q 003468 781 GRSIYNNMKAF 791 (817)
Q Consensus 781 gR~~~~~i~~~ 791 (817)
+|+++++|+++
T Consensus 253 ~r~~~~~i~~n 263 (263)
T 2yj3_A 253 RKRLSNAIPSN 263 (263)
Confidence 99999999975
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=207.20 Aligned_cols=110 Identities=28% Similarity=0.420 Sum_probs=103.4
Q ss_pred HHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC
Q 003468 140 ALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP 219 (817)
Q Consensus 140 ~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~ 219 (817)
++++|.++.|..++|+|+|++ ++|++++|+|||+|.|++|++|||||+|++ |.+.||||+|||||.|+.|.++
T Consensus 2 al~~L~~l~p~~a~v~r~g~~-~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~---g~~~vdeS~LTGEs~pv~k~~g--- 74 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKE-IAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---GESYVDESMISGEPVPVLKSKG--- 74 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEE-EEEEGGGCCTTCEEEECTTCBCCSEEEEEE---CCEEEECHHHHCCSSCEEECTT---
T ss_pred HHHHHhcCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ceEEEEccccCCCCccEEECCC---
Confidence 567788889999999999998 899999999999999999999999999996 5689999999999999999986
Q ss_pred CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhh
Q 003468 220 ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEA 265 (817)
Q Consensus 220 ~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 265 (817)
+.+|+||.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 75 ---------~~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 75 ---------DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp ---------CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred ---------CEEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 6799999999999999999999999999999998876
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.7e-27 Score=207.65 Aligned_cols=116 Identities=26% Similarity=0.388 Sum_probs=103.9
Q ss_pred HhHHHHHHHHHHhhcccceEEecCCc------cceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCC
Q 003468 134 ESNAEKALEALKEIQSEQATVTRDGK------KIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGE 207 (817)
Q Consensus 134 e~~~~~~~~~l~~~~~~~~~V~r~g~------~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGE 207 (817)
++|+++++++|.++.|..++|+|+|+ + +.|++++|+|||+|.|++|++|||||+|++ |.+.||||+||||
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~-~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~---g~~~vdeS~LTGE 77 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSE-EQVDVELVQRGDIIKVVPGGKFPVDGRVIE---GHSMVDESLITGE 77 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEE-EEEETTTCCTTCEEECCTTCBCSSCEEECS---CCCEEECTTTTCC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEE-EEEeHHHCCCCCEEEECCCCEEEeeEEEEE---ccEEEEeccccCC
Confidence 46778889999999999999999764 4 789999999999999999999999999995 5569999999999
Q ss_pred ccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhh
Q 003468 208 SEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEA 265 (817)
Q Consensus 208 s~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 265 (817)
|.|+.|.++ +.+|+||.+.+|.+.++|++||.+|.+|+|.+++.++
T Consensus 78 s~pv~k~~g------------~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 78 AMPVAKKPG------------STVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp SSCEECCTT------------EEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred CccEEeCCC------------CEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 999999986 6899999999999999999999999999999988765
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=234.65 Aligned_cols=280 Identities=30% Similarity=0.448 Sum_probs=199.2
Q ss_pred hHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCC
Q 003468 353 LGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGR 432 (817)
Q Consensus 353 ~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (817)
-+.++++|+|+++|++.++|+++++++||||||||||.+.+.+.+++..+.
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------------------------- 58 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------------------------- 58 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-----------------------------
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-----------------------------
Confidence 367899999999999999999999999999999999999999988876421
Q ss_pred CCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeec
Q 003468 433 MDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLE 512 (817)
Q Consensus 433 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 512 (817)
.... ++..++.. +. .+.||...|+..+++..|+..... + .+..+.
T Consensus 59 ~~~~---~l~~~~~~-----e~------~s~hp~~~a~~~~~~~~g~~~~~~-------~--------------~~~~~~ 103 (287)
T 3a1c_A 59 DERE---LLRLAAIA-----ER------RSEHPIAEAIVKKALEHGIELGEP-------E--------------KVEVIA 103 (287)
T ss_dssp CHHH---HHHHHHHH-----TT------TCCSHHHHHHHHHHHHTTCCCCCC-------S--------------CEEEET
T ss_pred CHHH---HHHHHHHH-----hh------cCCCHHHHHHHHHHHhcCCCcccc-------c--------------cceeec
Confidence 0111 22221111 11 146899999999998888742110 0 000000
Q ss_pred cCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccccc
Q 003468 513 FDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLRE 592 (817)
Q Consensus 513 F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~ 592 (817)
.+.+.. ..+.+|.++.+.+.+. +++ +.+.+..+.+..+|.+++.+++.
T Consensus 104 ----G~~~~~---------~~~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~i~~~~d----- 151 (287)
T 3a1c_A 104 ----GEGVVA---------DGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVARN----- 151 (287)
T ss_dssp ----TTEEEE---------TTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHHTTCEEEEEEET-----
T ss_pred ----CCCeEE---------EEEEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhCCCeEEEEEEC-----
Confidence 000000 1133455443332111 111 12344566778899999988752
Q ss_pred ccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 593 FETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
..+++.+...++++|++.++++.|+++|+++.++||++...+..+++.+|+.
T Consensus 152 ----------------------------~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 203 (287)
T 3a1c_A 152 ----------------------------GRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 203 (287)
T ss_dssp ----------------------------TEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred ----------------------------CEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence 2478888889999999999999999999999999999999999999999984
Q ss_pred CCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC
Q 003468 673 GAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI 752 (817)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~ 752 (817)
. +|....|..|...++.++.. +.++||||+.||++|++.||++|++|
T Consensus 204 ~-------------------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~- 250 (287)
T 3a1c_A 204 L-------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG- 250 (287)
T ss_dssp E-------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-
T ss_pred e-------------------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeC-
Confidence 2 34455688999999999988 99999999999999999999999999
Q ss_pred CccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHH
Q 003468 753 AGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK 789 (817)
Q Consensus 753 ~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 789 (817)
++.+..+..||+++.++++..+..+++.+|+++++|+
T Consensus 251 ~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 251 SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 5666667789999988889999999999999999885
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-23 Score=217.16 Aligned_cols=276 Identities=31% Similarity=0.432 Sum_probs=188.6
Q ss_pred ccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHH
Q 003468 365 VRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKIS 444 (817)
Q Consensus 365 vk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (817)
+|++.++|.+++++.||||++||||.|+|+|.+++..+. ... .+...+
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-----------------------------~~~---~~~~~~ 48 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-----------------------------SED---ELLQIA 48 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-----------------------------CHH---HHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-----------------------------CHH---HHHHHH
Confidence 578999999999999999999999999999999876531 011 222222
Q ss_pred hHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEE
Q 003468 445 AVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLV 524 (817)
Q Consensus 445 ~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv 524 (817)
..+... ..+|...++...++..|...... ..+..++ .+.+...+
T Consensus 49 ~~~~~~-----------s~~~~~~a~~~~~~~~g~~~~~~---------------------~~~~~~~----g~~~~~~~ 92 (280)
T 3skx_A 49 ASLEAR-----------SEHPIAAAIVEEAEKRGFGLTEV---------------------EEFRAIP----GKGVEGIV 92 (280)
T ss_dssp HHHHTT-----------CCSHHHHHHHHHHHHTTCCCCCC---------------------EEEEEET----TTEEEEEE
T ss_pred HHhhcc-----------CCCHHHHHHHHHHHhcCCCCCCc---------------------cceeecC----CCEEEEEE
Confidence 222211 24578888888888877643110 0011111 11122222
Q ss_pred eecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcch
Q 003468 525 NSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPA 604 (817)
Q Consensus 525 ~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~ 604 (817)
. + ..+..|.++.+....... . +....+...+.+.+.+++
T Consensus 93 ~---~--~~~~~~~~~~~~~~~~~~----------~--------~~~~~~~~~~~~~~~~~~------------------ 131 (280)
T 3skx_A 93 N---G--RRYMVVSPGYIRELGIKT----------D--------ESVEKLKQQGKTVVFILK------------------ 131 (280)
T ss_dssp T---T--EEEEEECHHHHHHTTCCC----------C--------TTHHHHHTTTCEEEEEEE------------------
T ss_pred C---C--EEEEEecHHHHHHcCCCc----------h--------HHHHHHHhCCCeEEEEEE------------------
Confidence 1 1 122335555544332110 0 112344455555554442
Q ss_pred hhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccC
Q 003468 605 HQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSIT 684 (817)
Q Consensus 605 ~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 684 (817)
+..++|.+.+.++++|++.++++.|++.|+++.++||++...+..+++.+|+..
T Consensus 132 ---------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~----------- 185 (280)
T 3skx_A 132 ---------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD----------- 185 (280)
T ss_dssp ---------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----------
T ss_pred ---------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-----------
Confidence 335789999999999999999999999999999999999999999999999842
Q ss_pred hhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCE
Q 003468 685 GKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDM 764 (817)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~ 764 (817)
.|....|.+|...++.+.+.. .++||||+.||++|++.||+||+|| ++.+..++.||+
T Consensus 186 --------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~ 243 (280)
T 3skx_A 186 --------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADI 243 (280)
T ss_dssp --------------------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSE
T ss_pred --------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCE
Confidence 455677889999999887765 6799999999999999999999999 577777999999
Q ss_pred EeccCCccHHHHHHHHhHHHHHhHHHHHHHHhh
Q 003468 765 VLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFC 797 (817)
Q Consensus 765 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 797 (817)
++..++++++..+++.+|++++++++++.|.+.
T Consensus 244 ~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 244 VLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp ECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999874
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=172.58 Aligned_cols=133 Identities=22% Similarity=0.269 Sum_probs=108.4
Q ss_pred CChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHH
Q 003468 463 GMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENL 542 (817)
Q Consensus 463 ~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i 542 (817)
++|+|.|++.++...+. ......|.++.++||+|.||||+++++..+++..+++|||||.|
T Consensus 33 ~n~~d~Ail~~~~~~~~-------------------~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~I 93 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESA-------------------RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEI 93 (170)
T ss_dssp CCHHHHHHHHTSCHHHH-------------------HHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHH
T ss_pred CChHHHHHHHHHHhcCh-------------------hhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHH
Confidence 68999999987532111 11234578899999999999999999876778899999999999
Q ss_pred HhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeE
Q 003468 543 LERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLV 622 (817)
Q Consensus 543 l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~ 622 (817)
+++|+.+. .+|...|+++..++.+.+.+++|+++|+|||++|||+++..... .....|+||+
T Consensus 94 L~~C~~~~-~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~-----------------~~~~~E~~L~ 155 (170)
T 3gwi_A 94 LNVCSQVR-HNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD-----------------YQRADESDLI 155 (170)
T ss_dssp HTTEEEEE-ETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC-----------------CCGGGSCSEE
T ss_pred HHHhHHHh-cCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc-----------------cCccccCCcE
Confidence 99999875 48889999999999999999999999999999999987542100 0123489999
Q ss_pred EEEEeccCCC
Q 003468 623 FVGMVGLRDP 632 (817)
Q Consensus 623 ~lG~~~~~d~ 632 (817)
|+|+++|-|.
T Consensus 156 f~G~~g~~~~ 165 (170)
T 3gwi_A 156 LEGYIAFLDH 165 (170)
T ss_dssp EEEEEEEEC-
T ss_pred EEehhccccc
Confidence 9999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3.1e-17 Score=173.03 Aligned_cols=148 Identities=15% Similarity=0.142 Sum_probs=112.2
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 629 LRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 629 ~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
..+++||+++++++.|+++|++++|+||+...++.++++++|+...+..+....+..++- .....+.......+++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~----~~~~~~~~~~i~~~~k 213 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDEN----GVLKGFKGELIHVFNK 213 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTT----SBEEEECSSCCCTTCH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEccc----ceeEeccccccchhhc
Confidence 457999999999999999999999999999999999999999865432222111110000 0000000001123455
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHh---hhCCceEEeCC------CccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL---KLADIGVAMGI------AGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l---~~A~vgiamg~------~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..|.+|...+..++..++.|+|+|||.||+||+ ..||+|||||- ++++.+++++|+|+.+|++..++.+|.
T Consensus 214 ~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 214 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred ccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 667788888888988999999999999999995 49999999993 567788999999999999999999874
Q ss_pred H
Q 003468 780 E 780 (817)
Q Consensus 780 ~ 780 (817)
+
T Consensus 294 ~ 294 (297)
T 4fe3_A 294 Q 294 (297)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-13 Score=134.45 Aligned_cols=126 Identities=18% Similarity=0.269 Sum_probs=103.0
Q ss_pred HHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHH
Q 003468 640 AIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVR 719 (817)
Q Consensus 640 ~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 719 (817)
+++.|+++|+++.++||++...+..+++.+|+.. +|.. +..|...++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~-------------------------------~f~~--~~~K~~~~~ 100 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH-------------------------------LFQG--REDKLVVLD 100 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-------------------------------EECS--CSCHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-------------------------------HhcC--cCChHHHHH
Confidence 9999999999999999999999999999999853 1111 145545444
Q ss_pred ----HHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCc----cHHHHHHHHhHHHHHhHHHH
Q 003468 720 ----LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNF----GTIVAAVGEGRSIYNNMKAF 791 (817)
Q Consensus 720 ----~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~----~~i~~~i~~gR~~~~~i~~~ 791 (817)
.++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++. ..+.+.+..+|..+++|+++
T Consensus 101 ~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~ 179 (189)
T 3mn1_A 101 KLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSV 179 (189)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHT
T ss_pred HHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHH
Confidence 44444678999999999999999999999999 6888889999999998754 44667778899999999999
Q ss_pred HHHHhhhh
Q 003468 792 IRYGFCHL 799 (817)
Q Consensus 792 i~~~~~~n 799 (817)
+.|.+.+|
T Consensus 180 ~~~~~~~~ 187 (189)
T 3mn1_A 180 YLEGHHHH 187 (189)
T ss_dssp TSTTC---
T ss_pred Hhcccccc
Confidence 99998876
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1e-11 Score=124.87 Aligned_cols=147 Identities=17% Similarity=0.095 Sum_probs=103.4
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-----Ccccc---cccc-Ch---hHHHHH------
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-----HEDIS---SQSI-TG---KEFMDI------ 691 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~~~~~---~~~~-~~---~~~~~~------ 691 (817)
...+.+++.++|++|+++|++++++|||+...+..+++.+|+... +..+. ...+ .. +.+..+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999998531 00010 0111 00 111111
Q ss_pred ----------------------------HHHhHhhccCCceE-----EEecCc--ccHHHHHHHHhcC----CCEEEEEc
Q 003468 692 ----------------------------HNQKNYLRQDGGLL-----FSRAEP--RHKQEIVRLLKED----GEVVAMTG 732 (817)
Q Consensus 692 ----------------------------~~~~~~~~~~~~~v-----~~r~~p--~~K~~iv~~l~~~----~~~v~~~G 732 (817)
.+....+ ...+ +....| ..|...++.+.+. .+.++++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iG 176 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESR---GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIG 176 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTT---TEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhc---CEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEEC
Confidence 0000000 1111 112234 6787777666443 46799999
Q ss_pred CCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 733 DGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 733 Dg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
|+.||++|++.|++||||| ++.+.+++.||+++.+++.+++.+++++
T Consensus 177 D~~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 177 DSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp CSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CcHHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 9999999999999999999 6778889999999999999999998853
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=5.3e-12 Score=122.12 Aligned_cols=133 Identities=17% Similarity=0.124 Sum_probs=105.8
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.+++.++|+.|+++|++++++||++...+..+++.+|+.. +|.. ..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-------------------------------~~~~--~k 82 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------------FFLG--KL 82 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------------EEES--CS
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-------------------------------eecC--CC
Confidence 35677899999999999999999999999999999999852 1211 23
Q ss_pred cHHHH----HHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHH-HH---HHHhHHH
Q 003468 713 HKQEI----VRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIV-AA---VGEGRSI 784 (817)
Q Consensus 713 ~K~~i----v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~-~~---i~~gR~~ 784 (817)
.|... ++.++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+++ .+ +...|..
T Consensus 83 ~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~ 161 (180)
T 1k1e_A 83 EKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGK 161 (180)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCc
Confidence 34444 4444444578999999999999999999999999 67888899999999988877777 33 3456667
Q ss_pred HHhHHHHHHHHhhhh
Q 003468 785 YNNMKAFIRYGFCHL 799 (817)
Q Consensus 785 ~~~i~~~i~~~~~~n 799 (817)
+++++..+.|.++-+
T Consensus 162 ~~~~~~~~~~~~~~~ 176 (180)
T 1k1e_A 162 SSVFDTAQGFLKSVK 176 (180)
T ss_dssp THHHHCHHHHHHHGG
T ss_pred hhhhhhccchhhhhc
Confidence 888888888877653
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-12 Score=140.82 Aligned_cols=147 Identities=15% Similarity=0.199 Sum_probs=112.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE-----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF----- 706 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----- 706 (817)
++.|++.++++.|+++|+++.++||+....+..+++.+|+...... .+ ...+..+.
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~----~l---------------~~~d~~~tg~~~~ 238 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN----TL---------------EIVSGKLTGQVLG 238 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE----EE---------------EEETTEEEEEEES
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee----ee---------------EeeCCeeeeeecc
Confidence 6899999999999999999999999999999999999998531100 00 00001111
Q ss_pred ----EecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhH
Q 003468 707 ----SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGR 782 (817)
Q Consensus 707 ----~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR 782 (817)
.+..|+....+++.++...+.++|+|||.||++|++.||+|++| ++.+.+++.||+++..+++.++..+++...
T Consensus 239 ~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l 316 (335)
T 3n28_A 239 EVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAAL 316 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHH
T ss_pred cccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHH
Confidence 12334445666777777778999999999999999999999999 577888999999999999999999998888
Q ss_pred HHHHhHHHHHHHHhhhh
Q 003468 783 SIYNNMKAFIRYGFCHL 799 (817)
Q Consensus 783 ~~~~~i~~~i~~~~~~n 799 (817)
....++++++.|.+.+|
T Consensus 317 ~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 317 VAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HHTTCCCCC--------
T ss_pred HHhhhhccccccccccc
Confidence 88889999999998876
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.30 E-value=3.1e-11 Score=125.82 Aligned_cols=67 Identities=30% Similarity=0.410 Sum_probs=57.2
Q ss_pred cHHHHHH----HHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 713 HKQEIVR----LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 713 ~K~~iv~----~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
.|...++ .++...+.|++|||+.||++|++.|++||||| ++.+.+|++||+|+.+++.+|+.++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 5644444 44445678999999999999999999999999 6888889999999999999999999863
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=3.4e-11 Score=126.27 Aligned_cols=68 Identities=25% Similarity=0.316 Sum_probs=57.5
Q ss_pred ccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 712 RHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 712 ~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
..|...++.+ +...+.|++|||+.||++|++.|++||||| ++.+.+|+.||+|+.+++.+|+.++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 3465544444 444578999999999999999999999999 7888889999999999999999999863
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.3e-11 Score=128.62 Aligned_cols=147 Identities=23% Similarity=0.312 Sum_probs=89.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC----------------CccccccccChhHHHHHHHHh
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA----------------HEDISSQSITGKEFMDIHNQK 695 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------~~~~~~~~~~~~~~~~~~~~~ 695 (817)
.+.+.+.++++++++.|++++++||+....+..+.+.+|+... .+.+....+..+.+..+.+..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999997531 111111122222222221100
Q ss_pred H-------------------------------------------------------------------hhcc--CCceE-
Q 003468 696 N-------------------------------------------------------------------YLRQ--DGGLL- 705 (817)
Q Consensus 696 ~-------------------------------------------------------------------~~~~--~~~~v- 705 (817)
. .+.. ....-
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 0 0000 00000
Q ss_pred ------EEecCc--ccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH
Q 003468 706 ------FSRAEP--RHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT 773 (817)
Q Consensus 706 ------~~r~~p--~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~ 773 (817)
+....| ..|...++.+ +...+.+++|||+.||++|++.|++||||| ++.+.+|++||+|+.+++.+|
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~G 260 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENG 260 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------C
T ss_pred EEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccH
Confidence 111222 3465544443 334578999999999999999999999999 677888999999999999999
Q ss_pred HHHHHH
Q 003468 774 IVAAVG 779 (817)
Q Consensus 774 i~~~i~ 779 (817)
+.++|+
T Consensus 261 v~~~i~ 266 (279)
T 3mpo_A 261 VAAAIR 266 (279)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 999884
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.4e-11 Score=126.88 Aligned_cols=68 Identities=19% Similarity=0.130 Sum_probs=57.3
Q ss_pred ccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 712 RHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 712 ~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
..|...++.+ +...+.|++|||+.||++|++.|++||||| ++.+.+|+.||+|+.+++.+|+.++|++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 3465554444 334578999999999999999999999999 7888889999999999999999999863
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=126.38 Aligned_cols=68 Identities=19% Similarity=0.202 Sum_probs=56.4
Q ss_pred ccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCE--EeccCCccHHHHHHHH
Q 003468 712 RHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDM--VLADDNFGTIVAAVGE 780 (817)
Q Consensus 712 ~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~--vl~~~~~~~i~~~i~~ 780 (817)
..|...++.+ +...+.+++|||+.||++|++.|++||||| ++.+.+|++||+ ++.+++.+|+.++|++
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~~ 281 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLRK 281 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHHH
Confidence 4565555544 344578999999999999999999999999 788888999984 7888899999999863
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-10 Score=118.48 Aligned_cols=63 Identities=30% Similarity=0.369 Sum_probs=54.9
Q ss_pred HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 717 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 717 iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
+.+.++...+.|++|||+.||++|++.|++||||| ++.+.+|+.||+|+.+++.+|+.++|++
T Consensus 191 l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 191 MIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred HHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 33444555678999999999999999999999999 6888889999999999999999999863
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=5.9e-11 Score=122.85 Aligned_cols=68 Identities=31% Similarity=0.399 Sum_probs=57.8
Q ss_pred ccHHHHHHH----HhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 712 RHKQEIVRL----LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 712 ~~K~~iv~~----l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
..|...++. ++...+.+++|||+.||++|++.|++||||| ++.+.+|++||+|+.+++.+|+.++|++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 456554444 4444578999999999999999999999999 6888889999999999999999999864
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.20 E-value=9.3e-12 Score=118.02 Aligned_cols=113 Identities=16% Similarity=0.092 Sum_probs=88.7
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHH--HhCCCCCCccccccccChhHHHHHHHHhHhhc
Q 003468 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR--EIGVFGAHEDISSQSITGKEFMDIHNQKNYLR 699 (817)
Q Consensus 622 ~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (817)
..++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--------------------------- 76 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--------------------------- 76 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---------------------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---------------------------
Confidence 45666766665 3899999999999999999 67778888 55552
Q ss_pred cCCceEEEecCcccHHHHHHHHh----cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHH
Q 003468 700 QDGGLLFSRAEPRHKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIV 775 (817)
Q Consensus 700 ~~~~~v~~r~~p~~K~~iv~~l~----~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~ 775 (817)
+| ..+.+|...++.+. ...+.++++||+.||++|++.|++++||+ ++.+.+++.||+++.+++-.+++
T Consensus 77 -----~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 77 -----TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp -----EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTTHH
T ss_pred -----EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCccHH
Confidence 11 12355766555443 34578999999999999999999999999 68899999999999988888855
Q ss_pred HH
Q 003468 776 AA 777 (817)
Q Consensus 776 ~~ 777 (817)
..
T Consensus 149 ~~ 150 (168)
T 3ewi_A 149 RE 150 (168)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.19 E-value=6.5e-11 Score=115.51 Aligned_cols=106 Identities=18% Similarity=0.265 Sum_probs=85.9
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc--ccHHH
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP--RHKQE 716 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p--~~K~~ 716 (817)
.+|+.|+++|+++.++||++...+..+++++|+.. +|....| +--..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-------------------------------~~~~~k~k~~~~~~ 107 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-------------------------------IYQGQDDKVQAYYD 107 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-------------------------------EECSCSSHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-------------------------------EeeCCCCcHHHHHH
Confidence 46999999999999999999999999999999852 1221222 22234
Q ss_pred HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHH
Q 003468 717 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 717 iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
+++.++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+++.
T Consensus 108 ~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~ 166 (195)
T 3n07_A 108 ICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVR 166 (195)
T ss_dssp HHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHH
T ss_pred HHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHH
Confidence 45555556688999999999999999999999999 688888999999999888777544
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-10 Score=120.57 Aligned_cols=63 Identities=19% Similarity=0.196 Sum_probs=55.9
Q ss_pred HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 717 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 717 iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
+.+.++...+.+++|||+.||++|++.|++||||| ++.+.+|++||+|+.+++.+|+.++|++
T Consensus 208 l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 208 LQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp HHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 44555556788999999999999999999999999 6788889999999999999999999864
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=7.2e-11 Score=115.11 Aligned_cols=123 Identities=17% Similarity=0.179 Sum_probs=99.5
Q ss_pred HHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE--ecCcccHHHH
Q 003468 640 AIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--RAEPRHKQEI 717 (817)
Q Consensus 640 ~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~~p~~K~~i 717 (817)
+|+.|+++|+++.++||++...+..+++.+|+.. +|. ...|+....+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-------------------------------~~~~~kpk~~~~~~~ 102 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-------------------------------YYKGQVDKRSAYQHL 102 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-------------------------------EECSCSSCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-------------------------------ceeCCCChHHHHHHH
Confidence 6999999999999999999999999999999853 111 2345566677
Q ss_pred HHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHH----HHHHhHHHHHhHHHHHH
Q 003468 718 VRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA----AVGEGRSIYNNMKAFIR 793 (817)
Q Consensus 718 v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~----~i~~gR~~~~~i~~~i~ 793 (817)
++.++...+.++++||+.||++|++.|+++++|+ ++.+.++..||+++.+++..+++. .+...|..+.++.+.+.
T Consensus 103 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~ 181 (191)
T 3n1u_A 103 KKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYL 181 (191)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 7778777889999999999999999999999999 678888999999999988776554 44556666666555444
Q ss_pred H
Q 003468 794 Y 794 (817)
Q Consensus 794 ~ 794 (817)
+
T Consensus 182 ~ 182 (191)
T 3n1u_A 182 K 182 (191)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.2e-10 Score=112.10 Aligned_cols=104 Identities=17% Similarity=0.275 Sum_probs=86.7
Q ss_pred HHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHH
Q 003468 640 AIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVR 719 (817)
Q Consensus 640 ~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 719 (817)
+++.|+++|+++.++||+....+..+++.+|+. ++... ..|...++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--------------------------------~~~~~--~~k~~~l~ 92 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--------------------------------VLHGI--DRKDLALK 92 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--------------------------------EEESC--SCHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--------------------------------eEeCC--CChHHHHH
Confidence 999999999999999999999999999999983 22222 44544444
Q ss_pred ----HHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 720 ----LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 720 ----~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+++..+
T Consensus 93 ~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 93 QWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 44444578999999999999999999999999 67888899999999998888777655
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.6e-10 Score=120.28 Aligned_cols=67 Identities=24% Similarity=0.285 Sum_probs=57.4
Q ss_pred ccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..|...++.+ +...+.|++|||+.||++|++.|++||||| ++.+.+|++||+|+.+++.+++.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4565555544 334578999999999999999999999999 688888999999999999999999996
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=115.00 Aligned_cols=100 Identities=21% Similarity=0.222 Sum_probs=83.2
Q ss_pred HHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHH
Q 003468 640 AIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVR 719 (817)
Q Consensus 640 ~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 719 (817)
+++.|+++|+++.++||+....+..+++.+|+.. +|... ..|...++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~-------------------------------~f~~~--k~K~~~l~ 130 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH-------------------------------LYQGQ--SDKLVAYH 130 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-------------------------------hhccc--CChHHHHH
Confidence 9999999999999999999999999999999953 12222 44555444
Q ss_pred ----HHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH
Q 003468 720 ----LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT 773 (817)
Q Consensus 720 ----~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~ 773 (817)
.++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+
T Consensus 131 ~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 131 ELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 44445788999999999999999999999999 578888999999999876665
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=3.4e-10 Score=107.51 Aligned_cols=107 Identities=22% Similarity=0.190 Sum_probs=87.7
Q ss_pred HHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe--cCcccHHHH
Q 003468 640 AIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--AEPRHKQEI 717 (817)
Q Consensus 640 ~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~p~~K~~i 717 (817)
+++.|+++|++++++||++...+..+++.+|+... |.. ..|+--..+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~-------------------------------~~~~kpk~~~~~~~ 87 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL-------------------------------FQGVVDKLSAAEEL 87 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE-------------------------------ECSCSCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe-------------------------------ecccCChHHHHHHH
Confidence 89999999999999999999999999999998531 111 123333455
Q ss_pred HHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH-HHHHH
Q 003468 718 VRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT-IVAAV 778 (817)
Q Consensus 718 v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~-i~~~i 778 (817)
++.++...+.++++||+.||++|++.|+++++++ ++.+.+++.||+++.+++..+ +.+++
T Consensus 88 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 88 CNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp HHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 6666666778999999999999999999999999 688888999999999988776 55554
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.01 E-value=5.6e-09 Score=108.70 Aligned_cols=66 Identities=24% Similarity=0.289 Sum_probs=55.6
Q ss_pred cHHHHHHHHh----cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 713 HKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l~----~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.|...++.+. ...+.++++||+.||++|++.|++||||| ++.+..++.||+++.+++.+++.++|+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 5655555543 33568999999999999999999999999 677778999999999999999999885
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.7e-09 Score=106.57 Aligned_cols=145 Identities=26% Similarity=0.234 Sum_probs=98.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-----C-------ccccccccChhHHHHHHHHh----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-----H-------EDISSQSITGKEFMDIHNQK---- 695 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~-------~~~~~~~~~~~~~~~~~~~~---- 695 (817)
.+.+.+.+++++++++|++++++||+....+..+.+.+|+... + +.+....+ +.+..+.+..
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~~~~~ 97 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM--DEEWILWNEIRKRF 97 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCC--SHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHHHHhC
Confidence 4788999999999999999999999999999999999987431 0 00000001 1111111000
Q ss_pred --------------------------------HhhccCCceEE-----EecCc--ccHHHHHHHH----hcCCCEEEEEc
Q 003468 696 --------------------------------NYLRQDGGLLF-----SRAEP--RHKQEIVRLL----KEDGEVVAMTG 732 (817)
Q Consensus 696 --------------------------------~~~~~~~~~v~-----~r~~p--~~K~~iv~~l----~~~~~~v~~~G 732 (817)
..+. ....+. ....| ..|...++.+ +...+.++++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iG 176 (231)
T 1wr8_A 98 PNARTSYTMPDRRAGLVIMRETINVETVREIINELN-LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVG 176 (231)
T ss_dssp TTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT-CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEE
T ss_pred CCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC-CcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEEC
Confidence 0000 001111 12222 3565555544 33457899999
Q ss_pred CCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 733 DGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 733 Dg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
|+.||++|++.|+++++|+ ++.+..++.||+++.+++.+++.+++++
T Consensus 177 D~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 177 DGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp CSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 9999999999999999999 5677778999999998888899988853
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.98 E-value=4.5e-09 Score=110.35 Aligned_cols=54 Identities=24% Similarity=0.304 Sum_probs=49.5
Q ss_pred CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEec-cCCccHHHHHHH
Q 003468 725 GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLA-DDNFGTIVAAVG 779 (817)
Q Consensus 725 ~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~-~~~~~~i~~~i~ 779 (817)
.+.+++|||+.||++|++.|++||||| ++.+.+++.||+++. +++.+|+.++|+
T Consensus 240 ~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 240 NDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp GGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred HHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 367999999999999999999999999 577778999999999 999999999885
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.91 E-value=9e-10 Score=117.65 Aligned_cols=167 Identities=14% Similarity=0.144 Sum_probs=109.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccC------hhHHHHH---------H----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSIT------GKEFMDI---------H---- 692 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~------~~~~~~~---------~---- 692 (817)
++++++.++++.|++ |+.+.++||+....+....+.+++... +...... ..++.++ .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE---LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE---EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh---hcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 468899999999999 999999999987666777777777321 1010000 0011000 0
Q ss_pred HHhHh----hccCC-ceEE---EecCcccHHHHHHHHhcCC--CEEEEEcCCccCHHHhhhC----CceEEeCCCccHHH
Q 003468 693 NQKNY----LRQDG-GLLF---SRAEPRHKQEIVRLLKEDG--EVVAMTGDGVNDAPALKLA----DIGVAMGIAGTEVA 758 (817)
Q Consensus 693 ~~~~~----~~~~~-~~v~---~r~~p~~K~~iv~~l~~~~--~~v~~~GDg~ND~~~l~~A----~vgiamg~~~~~~a 758 (817)
+.... +.... ..+. .-..+.+|...++.+.... +.|+++|||.||++|++.| ++|||| + +.+.+
T Consensus 179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-n-a~~~l 256 (332)
T 1y8a_A 179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-N-GNEYA 256 (332)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-S-CCHHH
T ss_pred HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-c-CCHHH
Confidence 00000 00000 0000 0123567888777554322 4499999999999999999 999999 4 67888
Q ss_pred HhhcCEEeccCCccHHHHHH----HHhHHHHHhHHH-------HHHHHhhhhHHHHHH
Q 003468 759 KEASDMVLADDNFGTIVAAV----GEGRSIYNNMKA-------FIRYGFCHLENHCLS 805 (817)
Q Consensus 759 k~~ad~vl~~~~~~~i~~~i----~~gR~~~~~i~~-------~i~~~~~~n~~~~~~ 805 (817)
|+.||+++.+++.+++..++ .+||..+ ++-+ ++.+..+.|+..++.
T Consensus 257 k~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (332)
T 1y8a_A 257 LKHADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEVLE 313 (332)
T ss_dssp HTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHHHH
T ss_pred HhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHHHH
Confidence 99999999999998888764 5777777 6555 666666677766654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.91 E-value=7.4e-09 Score=107.12 Aligned_cols=66 Identities=29% Similarity=0.344 Sum_probs=54.9
Q ss_pred cHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 713 HKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.|...++.+ +...+.++++||+.||++|++.|++||||| ++.+..++.||+++.+++.+|+.++++
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 455444443 333468999999999999999999999999 677778999999999988999999885
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.9e-09 Score=99.19 Aligned_cols=112 Identities=17% Similarity=0.182 Sum_probs=92.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe--cC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--AE 710 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~ 710 (817)
..+++.++++.|+++|++++++||++...+..+.+.+|+.. +|.. ..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------~~~~~kp~ 85 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------------------IYTGSYKK 85 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-------------------------------EEECC--C
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-------------------------------hccCCCCC
Confidence 46788999999999999999999999999999999999842 1111 22
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHH
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
|+--..+++.++...+.++++||+.||++|.+.|+++++++ ++.+..++.||+++.+.+..+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~ 150 (162)
T 2p9j_A 86 LEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALR 150 (162)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHH
Confidence 33334566666666778999999999999999999999998 577777889999999988888774
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-08 Score=105.09 Aligned_cols=66 Identities=30% Similarity=0.340 Sum_probs=55.5
Q ss_pred cHHHHHHHHh----cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 713 HKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l~----~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.|...++.+. ...+.++++||+.||++|++.|++|++|| ++.+..++.||+++.+++.+++.++|+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 5665555443 34568999999999999999999999999 577777899999999999999999885
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=2.6e-09 Score=106.21 Aligned_cols=129 Identities=19% Similarity=0.242 Sum_probs=94.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceE---EE
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLL---FS 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~ 707 (817)
-++.|++.++++.|++.|++++++|+.....+..+.+.+|+...-. ..+.. .+..+ ++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~----~~~~~---------------~~~~~~~~~~ 134 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS----NTLIV---------------ENDALNGLVT 134 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE----EEEEE---------------ETTEEEEEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc----ceeEE---------------eCCEEEeeec
Confidence 3578999999999999999999999999999999999999853110 00000 00000 01
Q ss_pred e--cCcccHHH----HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 708 R--AEPRHKQE----IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 708 r--~~p~~K~~----iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
. .....|.. +.+.++...+.+++|||+.||++|++.||++++| ++.+..++.||+++.++++.++..++.+
T Consensus 135 ~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 135 GHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp ESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred cCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 1 11233444 4445555668899999999999999999999999 4677779999999999999999888754
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=6.6e-09 Score=100.93 Aligned_cols=109 Identities=21% Similarity=0.256 Sum_probs=85.7
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC--cccHHH
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE--PRHKQE 716 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~--p~~K~~ 716 (817)
.+++.|+++|++++++||++...+..+++.+|+.. +|.... |+--..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-------------------------------~~~~~kpk~~~~~~ 108 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-------------------------------LYQGQSNKLIAFSD 108 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------------------EECSCSCSHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-------------------------------eecCCCCCHHHHHH
Confidence 48999999999999999999999999999999852 111112 222233
Q ss_pred HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHH-HHHH
Q 003468 717 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIV-AAVG 779 (817)
Q Consensus 717 iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~-~~i~ 779 (817)
+.+.++...+.++++||+.||++|++.|+++++++ ++.+.+++.||+++.+.+..+++ ++++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 44445544578999999999999999999999999 56677788999999988777777 5553
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.7e-09 Score=115.06 Aligned_cols=135 Identities=19% Similarity=0.244 Sum_probs=102.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA-- 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~-- 709 (817)
++.|++.++++.|+++|+++.++||.....+..+++.+|+...... .+ ...+..+..+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~----~l---------------~~~dg~~tg~~~~ 316 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAAN----EL---------------EIVDGTLTGRVVG 316 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEE----CE---------------EEETTEEEEEECS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeee----eE---------------EEeCCEEEeeEcc
Confidence 7899999999999999999999999999999999999999531100 00 00011122221
Q ss_pred ---CcccHHHHH----HHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhH
Q 003468 710 ---EPRHKQEIV----RLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGR 782 (817)
Q Consensus 710 ---~p~~K~~iv----~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR 782 (817)
.+..|..++ +.++...+.++++||+.||++|++.||+|+++ ++.+..++.||+++..+++.+++.++..+|
T Consensus 317 ~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~ 394 (415)
T 3p96_A 317 PIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTR 394 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCH
T ss_pred CCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCH
Confidence 133454444 44444567899999999999999999999999 367777999999999999999999998777
Q ss_pred HHHHh
Q 003468 783 SIYNN 787 (817)
Q Consensus 783 ~~~~~ 787 (817)
.-+..
T Consensus 395 ~~~~~ 399 (415)
T 3p96_A 395 GEIEA 399 (415)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=5.7e-09 Score=103.07 Aligned_cols=128 Identities=23% Similarity=0.330 Sum_probs=87.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe-cC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR-AE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~ 710 (817)
++.|+++++++.|++.|+++.++||+....+..+.+.+|+... +.......+ ..+ ...+... ..
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---------~~~---~~~~~~~~~~ 140 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA---FANRLIVKD---------GKL---TGDVEGEVLK 140 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE---EEEEEEEET---------TEE---EEEEECSSCS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE---EEeeeEEEC---------CEE---cCCcccCccC
Confidence 4678999999999999999999999999888888888887421 000000000 000 0000000 11
Q ss_pred cccHHHHHH----HHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHH
Q 003468 711 PRHKQEIVR----LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 711 p~~K~~iv~----~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
+..|...+. .++...+.++++||+.||++|++.||++++|+ +.+..+..||+++.++++..+..
T Consensus 141 ~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 141 ENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp TTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred CccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 345644443 33444578999999999999999999999998 45666889999998877776644
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.80 E-value=6.9e-09 Score=104.73 Aligned_cols=129 Identities=25% Similarity=0.307 Sum_probs=96.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-. ..+.+++. -.....|
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------------~~~kp~~ 163 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLT----VIAGDDSV----------------ERGKPHP 163 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCS----EEECTTTS----------------SSCTTSS
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhee----eEEeCCCC----------------CCCCCCH
Confidence 357899999999999999999999999999999999999853211 11111100 0011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc---eEEeCCCccHHHHh-hcCEEeccCCccHHHHHHHHhH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GVAMGIAGTEVAKE-ASDMVLADDNFGTIVAAVGEGR 782 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamg~~~~~~ak~-~ad~vl~~~~~~~i~~~i~~gR 782 (817)
+--..+++.++...+.+++|||+.||+.|++.||+ +|+||++..+..++ .||+++.+ +..+...++.|+
T Consensus 164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l~~~~ 236 (237)
T 4ex6_A 164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDS--FPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESS--HHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECC--HHHHHHHHHccC
Confidence 44567788888888899999999999999999999 99999555455555 89999864 888888887654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.8e-08 Score=102.04 Aligned_cols=138 Identities=12% Similarity=0.125 Sum_probs=90.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCC--CC--------CCcc------ccccccChhH--------
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGV--FG--------AHED------ISSQSITGKE-------- 687 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi--~~--------~~~~------~~~~~~~~~~-------- 687 (817)
.+.+.+.++|++|+++| +++++|||+...+..+.+.+ . +. .++. +....++.+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57899999999999999 99999999999988877654 2 10 0111 0000000000
Q ss_pred -----------------------------HHHHHHHhHhhccCCceE-----EEecCc--ccHHHHHHHHhcCCCEEEEE
Q 003468 688 -----------------------------FMDIHNQKNYLRQDGGLL-----FSRAEP--RHKQEIVRLLKEDGEVVAMT 731 (817)
Q Consensus 688 -----------------------------~~~~~~~~~~~~~~~~~v-----~~r~~p--~~K~~iv~~l~~~~~~v~~~ 731 (817)
...+.+..... ....+ +....| .+|..-++.+.+.-. |++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~ 177 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI--FGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIA 177 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH--HTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEE
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc--CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEE
Confidence 11110000000 01111 112223 468888887766644 9999
Q ss_pred cCCccCHHHhhhC--CceEEeCCCccHHHHhhcCEEecc-CCccHHHHHHH
Q 003468 732 GDGVNDAPALKLA--DIGVAMGIAGTEVAKEASDMVLAD-DNFGTIVAAVG 779 (817)
Q Consensus 732 GDg~ND~~~l~~A--~vgiamg~~~~~~ak~~ad~vl~~-~~~~~i~~~i~ 779 (817)
||+.||.+||+.| ++|||||| + ++.||+++.+ ++.+++.++|+
T Consensus 178 GD~~ND~~Ml~~a~~g~~vam~N-a----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 178 GDDATDEAAFEANDDALTIKVGE-G----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp ESSHHHHHHHHTTTTSEEEEESS-S----CCCCSEEESSHHHHHHHHHHHH
T ss_pred eCCCccHHHHHHhhCCcEEEECC-C----CCcceEEeCCCCCHHHHHHHHH
Confidence 9999999999999 99999995 4 6789999988 77888888885
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.77 E-value=3.8e-08 Score=102.72 Aligned_cols=56 Identities=30% Similarity=0.337 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 724 DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 724 ~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
..+.++++||+.||++|++.|++||||+ ++.+..++.||+++.+++.+|+.++|++
T Consensus 231 ~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 231 PLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp CGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 3468999999999999999999999999 5777789999999999999999999863
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.77 E-value=5.3e-09 Score=110.27 Aligned_cols=127 Identities=18% Similarity=0.245 Sum_probs=94.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA-- 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~-- 709 (817)
++.|++.++++.|+++|++++++||.....+..+++.+|+...-. ..+. ..+..+-.+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~----~~l~---------------~~dg~~tg~i~~ 239 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS----NTVE---------------IRDNVLTDNITL 239 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE----ECEE---------------EETTEEEEEECS
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE----EEEE---------------eeCCeeeeeEec
Confidence 488999999999999999999999999999999999999853110 0000 0001111111
Q ss_pred ---CcccHH----HHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 710 ---EPRHKQ----EIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 710 ---~p~~K~----~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.+..|. .+++.++...+.++++||+.||++|++.||+|++++ +.+..++.||.++..+++.++..+++
T Consensus 240 ~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 240 PIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred ccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 123343 344455555678999999999999999999999994 56777889999999889998887664
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.75 E-value=4.6e-08 Score=101.25 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=27.4
Q ss_pred CCCE--EEEEcCCccCHHHhhhCCceEEeCCCcc---HHHHhh--cC-EEeccCCccHHHHHHH
Q 003468 724 DGEV--VAMTGDGVNDAPALKLADIGVAMGIAGT---EVAKEA--SD-MVLADDNFGTIVAAVG 779 (817)
Q Consensus 724 ~~~~--v~~~GDg~ND~~~l~~A~vgiamg~~~~---~~ak~~--ad-~vl~~~~~~~i~~~i~ 779 (817)
..+. ++++||+.||.+|++.|++||||| ++. +..++. || +++.+++.+|+.++|+
T Consensus 205 ~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 205 SGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp HSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC------------------------------
T ss_pred ccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 3456 999999999999999999999999 454 444543 79 8998989999999885
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.75 E-value=2.7e-08 Score=102.18 Aligned_cols=62 Identities=39% Similarity=0.394 Sum_probs=52.7
Q ss_pred HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 717 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 717 iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+.+.++...+.+++|||+.||++|++.|++|++|| ++.+..+..||+++.+++.+|+..+++
T Consensus 195 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 195 IIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHH
Confidence 33444445578999999999999999999999999 677777999999999888888998885
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.74 E-value=9.6e-09 Score=100.56 Aligned_cols=119 Identities=25% Similarity=0.417 Sum_probs=89.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|++++++|+.....+..+ +.+|+... .. .... ...........|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~---~~~~---------------~~~~~~~~~~~~ 138 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN---RAIF---------------EDGKFQGIRLRF 138 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE---EEEE---------------ETTEEEEEECCS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee---eEEe---------------eCCceECCcCCc
Confidence 7899999999999999999999999988888888 88887421 00 0000 000011134566
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..|...++.+ ..+.+++|||+.||++|++.||++|+|++ +.+ .||+++.+ +..+...++
T Consensus 139 ~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~-~~~----~ad~v~~~--~~el~~~l~ 197 (201)
T 4ap9_A 139 RDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGR-EIP----GADLLVKD--LKELVDFIK 197 (201)
T ss_dssp SCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESS-CCT----TCSEEESS--HHHHHHHHH
T ss_pred cCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECC-CCc----cccEEEcc--HHHHHHHHH
Confidence 7898888888 66789999999999999999999999994 444 79999865 566666653
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=2.9e-08 Score=100.83 Aligned_cols=67 Identities=16% Similarity=0.213 Sum_probs=54.2
Q ss_pred cHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhh-------cCEEeccCCccHHHHHHHH
Q 003468 713 HKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEA-------SDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 713 ~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~-------ad~vl~~~~~~~i~~~i~~ 780 (817)
.|...++.+.+ ..+.++++||+.||++|++.|++||||| ++.+..++. ||+++.+++.+|+.+++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 46555544432 3467999999999999999999999999 577777875 8899999889999998853
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.4e-08 Score=100.04 Aligned_cols=128 Identities=13% Similarity=0.150 Sum_probs=95.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.+++.++++.|++.|++++++|+.....+..+.+.+|+...-.. ..++.. .. ......|+
T Consensus 71 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~i~~~----------------~~-~~~kp~~~ 131 (205)
T 3m9l_A 71 PAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE--ADVLGR----------------DE-APPKPHPG 131 (205)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG--GGEECT----------------TT-SCCTTSSH
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc--ceEEeC----------------CC-CCCCCCHH
Confidence 468899999999999999999999999999999999998532100 001110 00 01112334
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGR 782 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR 782 (817)
--..+++.++...+.+++|||+.||+.|.+.||+ +|+|+ ++.+..++.||+++.+ +..+...++..|
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~~--~~el~~~~~~~~ 199 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHARD--CAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECSS--HHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeCC--HHHHHHHHHhcc
Confidence 4466777777777899999999999999999999 99999 4555558889999965 888888886554
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.69 E-value=3.8e-08 Score=100.28 Aligned_cols=134 Identities=16% Similarity=0.188 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC------------C--------------CccccccccChhHH
Q 003468 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG------------A--------------HEDISSQSITGKEF 688 (817)
Q Consensus 635 ~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~------------~--------------~~~~~~~~~~~~~~ 688 (817)
+.+.++|++|+++|++++++||+....+..+.+.+|+.. . ++.+....++.+.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 99 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKI 99 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CCCCCCEEECSCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcccccccccccCceEEEecCCCHHHH
Confidence 459999999999999999999999999999999998742 0 11111122333322
Q ss_pred HHHH----HH-----h---------Hh-------------------------------hccCCceEE-----EecC-ccc
Q 003468 689 MDIH----NQ-----K---------NY-------------------------------LRQDGGLLF-----SRAE-PRH 713 (817)
Q Consensus 689 ~~~~----~~-----~---------~~-------------------------------~~~~~~~v~-----~r~~-p~~ 713 (817)
..+. +. . .. +......+. .... ...
T Consensus 100 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~ei~~g~s 179 (249)
T 2zos_A 100 REELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHGNSD 179 (249)
T ss_dssp HHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSSCHHHHHHHTTCEEEECSSSEEEECSCC
T ss_pred HHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCHHHHHHHHhCCEEEEecCCeEEEeCCCC
Confidence 2220 00 0 00 000000000 1111 245
Q ss_pred HHHHHHHHh----c-CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEecc
Q 003468 714 KQEIVRLLK----E-DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 714 K~~iv~~l~----~-~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~ 768 (817)
|..-++.+. . ..+.|++|||+.||++||+.|++||||||+..+..++.||+++.+
T Consensus 180 Kg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 180 KGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred hHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 766555443 2 457899999999999999999999999954326668889988765
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=7.4e-08 Score=98.81 Aligned_cols=64 Identities=22% Similarity=0.247 Sum_probs=52.8
Q ss_pred ccHHHHHHHHhcC----C--CEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKED----G--EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~----~--~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..|...++.+.+. . +.++++||+.||.+|++.|++|||||| +.+ . .|++++.+++.+++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n-a~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGR-GDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSS-SCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCC-hhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5777766665443 3 789999999999999999999999995 555 3 7899999988899988875
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.67 E-value=2.9e-08 Score=99.27 Aligned_cols=121 Identities=13% Similarity=0.148 Sum_probs=92.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE- 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~- 710 (817)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...- ...+.+...
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--------------------------~~~~~~~~~~ 139 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--------------------------DAIVGSSLDG 139 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--------------------------SEEEEECTTS
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--------------------------eeeeccCCCC
Confidence 46789999999999999999999999999999999999985311 112222222
Q ss_pred -----cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc---eEEeCCCccHHH-HhhcCEEeccCCccHHHHHHHH
Q 003468 711 -----PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GVAMGIAGTEVA-KEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 711 -----p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamg~~~~~~a-k~~ad~vl~~~~~~~i~~~i~~ 780 (817)
|+--..+++.++...+.+++|||+.||++|++.||+ +|+||++..+.. +..||+++.+ +..+...+..
T Consensus 140 ~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s--~~el~~~~~~ 216 (226)
T 3mc1_A 140 KLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNS--VDELHKKILE 216 (226)
T ss_dssp SSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESS--HHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECC--HHHHHHHHHH
Confidence 233355667777777899999999999999999999 899995444443 6889999965 7778877753
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.61 E-value=7e-08 Score=95.63 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=88.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccc--cccChhHHHHHHHHhHhhccCCc---eEEE
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISS--QSITGKEFMDIHNQKNYLRQDGG---LLFS 707 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~v~~ 707 (817)
+.|++.++++.|+++|++++++|+.....+..+.+.+|+.... +.. ..... ... ....
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------------~~~~~~~~~~ 145 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAVETIWNS---------------DGSFKELDNS 145 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEEEEEECT---------------TSBEEEEECT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEeeeeecC---------------CCceeccCCC
Confidence 7799999999999999999999999999999999999985210 000 00000 000 0111
Q ss_pred ecCcccHHHHHHHH-hcCCCEEEEEcCCccCHHHhhh----CCceEEeCCCccHHHHhhcCEEeccCCccHHHHH
Q 003468 708 RAEPRHKQEIVRLL-KEDGEVVAMTGDGVNDAPALKL----ADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAA 777 (817)
Q Consensus 708 r~~p~~K~~iv~~l-~~~~~~v~~~GDg~ND~~~l~~----A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~ 777 (817)
...|..+...+..+ +...+.++++||+.||++|++. +.++++|+ +..+..+..||+++.+ +..+...
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~--~~el~~~ 217 (219)
T 3kd3_A 146 NGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARN--VAELASL 217 (219)
T ss_dssp TSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESS--HHHHHHH
T ss_pred CCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCC--HHHHHHh
Confidence 23455666666544 6678899999999999999976 45666666 4667778999999865 5555544
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.56 E-value=9.2e-08 Score=95.25 Aligned_cols=116 Identities=19% Similarity=0.200 Sum_probs=87.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.+++.+.++.+++.|++++++|+..........+.+|+..... ..+.+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~--------------------------~~~~~~~~~ 147 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--------------------------ALASAEKLP 147 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--------------------------EEEECTTSS
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc--------------------------EEEeccccC
Confidence 346889999999999999999999999888888888888743111 111111
Q ss_pred ---cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe----CCCccHHHHhhcCEEeccCCccHHHH
Q 003468 709 ---AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM----GIAGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 709 ---~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam----g~~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
..|+--..+++.++...+.+++|||+.||++|++.||++++| + ++.+..+..||+++.+ +..+..
T Consensus 148 ~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~--~~el~~ 219 (226)
T 1te2_A 148 YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSS--LTELTA 219 (226)
T ss_dssp CCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSC--GGGCCH
T ss_pred CCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECC--HHHHhH
Confidence 124444667777877778999999999999999999999999 6 3344458889999865 444443
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.9e-07 Score=93.69 Aligned_cols=123 Identities=12% Similarity=0.077 Sum_probs=85.2
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++.|+++.++|+... +..+.+.+|+...-. ..+.+++. -.....|+
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~----~i~~~~~~----------------~~~Kp~~~ 150 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH----AIVDPTTL----------------AKGKPDPD 150 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS----EECCC-------------------------CC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC----EEeeHhhC----------------CCCCCChH
Confidence 678999999999999999999999754 777888888853211 11111111 11123344
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
--..+++.++...+.+++|||+.||+.|.+.||++++|.+ +.+..+ .||+++.+.+.-.+..+++
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~-~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVG-QGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC---------CSEECSSGGGCCHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEEC-Cccccc-cCCEEeCChHhCCHHHHHH
Confidence 4567888888888899999999999999999999999994 445445 8999998766666555554
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.54 E-value=5.4e-08 Score=96.71 Aligned_cols=122 Identities=11% Similarity=0.034 Sum_probs=87.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.+++.+.++.+++.|+++.++|+. ..+..+.+.+|+..... ..+.+++. -.....|+
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~----~~~~~~~~----------------~~~Kp~~~ 149 (221)
T 2wf7_A 92 VYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD----AIADPAEV----------------AASKPAPD 149 (221)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS----EECCTTTS----------------SSCTTSSH
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc----eEeccccC----------------CCCCCChH
Confidence 5688999999999999999999998 45566777788743111 11111100 00112234
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
--..+++.++...+.+++|||+.||++|++.||++++|+ ++.+..+ .||+++.+.+..++..++
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHH
Confidence 456677777777889999999999999999999999999 4556667 899999876666666554
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2.9e-07 Score=90.50 Aligned_cols=127 Identities=16% Similarity=0.149 Sum_probs=93.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceE--EEec
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLL--FSRA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~r~ 709 (817)
++.|++.++++.|++. ++++++|+.....+..+.+.+|+...-. .....+ ..... .-..
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~---~~~~~~---------------~~~~~~~~~~p 129 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEID---------------DSDRVVGYQLR 129 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE---EEEEEC---------------TTSCEEEEECC
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec---ceeEEc---------------CCceEEeeecC
Confidence 5789999999999999 9999999999999999999999853110 000000 01111 1126
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.|+.|...++.++..++.++++||+.||++|.+.||++++++ ...+. +..++.++.-+++..+...+.
T Consensus 130 ~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENV-IREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp SSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHH-HHHCTTSCEECSHHHHHHHHH
T ss_pred CCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHHH-HHHHhhhccccchHHHHHHHH
Confidence 788899999999888899999999999999999999999985 44444 544444332346788777663
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.51 E-value=9.3e-08 Score=95.85 Aligned_cols=127 Identities=13% Similarity=0.098 Sum_probs=93.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-. ..+..++. -.....|+
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------------~~~kp~~~ 151 (233)
T 3s6j_A 92 ALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI----NIVTRDDV----------------SYGKPDPD 151 (233)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS----CEECGGGS----------------SCCTTSTH
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh----eeeccccC----------------CCCCCChH
Confidence 56889999999999999999999999999999999998854211 11111110 00112234
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc---eEEeCCCccHHHHhh-cCEEeccCCccHHHHHHHHh
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GVAMGIAGTEVAKEA-SDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamg~~~~~~ak~~-ad~vl~~~~~~~i~~~i~~g 781 (817)
--..+++.++...+.+++|||+.||+.|++.||+ +|++|.+..+..+.. ||+++.+ +..+...++..
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~--~~el~~~l~~~ 222 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED--PLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESS--HHHHHHTGGGT
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECC--HHHHHHHHHHH
Confidence 4456777777777889999999999999999999 777775555555554 9999865 88888877544
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.3e-07 Score=98.68 Aligned_cols=124 Identities=22% Similarity=0.207 Sum_probs=85.3
Q ss_pred CCcHHHHHHHHHHHHc-CCeEEEECCCCH---------------------hhHHHHHHHhCCCCCCccccccccChhHHH
Q 003468 632 PPREEVRQAIEDCKAA-GIRVMVITGDNK---------------------NTAEAICREIGVFGAHEDISSQSITGKEFM 689 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~-gi~v~~~TGd~~---------------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 689 (817)
...+++.++++.+++. |+++.+.|.... ..+..+.+..|+...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--------------- 186 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN--------------- 186 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE---------------
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE---------------
Confidence 4678999999999998 999888886622 222222233332100
Q ss_pred HHHHHhHhhccC-------CceEEEecCc--ccHHHHHH----HHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccH
Q 003468 690 DIHNQKNYLRQD-------GGLLFSRAEP--RHKQEIVR----LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTE 756 (817)
Q Consensus 690 ~~~~~~~~~~~~-------~~~v~~r~~p--~~K~~iv~----~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~ 756 (817)
+... ....+....| ..|...++ .++...+.++++||+.||++|++.|++|++|| ++.+
T Consensus 187 --------~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~ 257 (289)
T 3gyg_A 187 --------INRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQ 257 (289)
T ss_dssp --------EEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCH
T ss_pred --------EEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccH
Confidence 0000 0113333333 34554444 44445578999999999999999999999999 5778
Q ss_pred HHHhhcCEEeccCCccHHHHHHH
Q 003468 757 VAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 757 ~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..++.||+++.+++.+++.++++
T Consensus 258 ~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 258 EAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp HHHHHCCCBCSSCHHHHHHHHHH
T ss_pred HHHHhCCEEcCCCCcCHHHHHHH
Confidence 88999999999988889998885
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.45 E-value=2.1e-07 Score=93.96 Aligned_cols=119 Identities=20% Similarity=0.180 Sum_probs=89.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE- 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~- 710 (817)
++.|++.++++.|++.|++++++|+.....+..+.+.+|+...- ...+.+...
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--------------------------~~~~~~~~~~ 163 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--------------------------KYIAGSNLDG 163 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--------------------------SEEEEECTTS
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--------------------------EEEEeccccC
Confidence 36789999999999999999999999999999999999985321 112222222
Q ss_pred -----cccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCc---eEEeCCCccHH-HHhhcCEEeccCCccHHHHHH
Q 003468 711 -----PRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADI---GVAMGIAGTEV-AKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 711 -----p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~v---giamg~~~~~~-ak~~ad~vl~~~~~~~i~~~i 778 (817)
|+--..+++.++.. .+.+++|||+.||+.|.+.||+ +|++|++..+. .+..||+++.+ +..+...|
T Consensus 164 ~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 164 TRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp CCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 22235567777777 8899999999999999999999 78888544343 35789999875 66666554
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.42 E-value=3.4e-07 Score=94.07 Aligned_cols=128 Identities=17% Similarity=0.237 Sum_probs=90.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ....+.++.. . .....|
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~----------~------~~kp~~ 163 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK---PDFLVTPDDV----------P------AGRPYP 163 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC---CSCCBCGGGS----------S------CCTTSS
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC---hHheecCCcc----------C------CCCCCH
Confidence 35689999999999999999999999988888888887764321 0111111110 0 011234
Q ss_pred ccHHHHHHHHhcCC-CEEEEEcCCccCHHHhhhCC---ceEEeCCCc-----------------------cHHHHhh-cC
Q 003468 712 RHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLAD---IGVAMGIAG-----------------------TEVAKEA-SD 763 (817)
Q Consensus 712 ~~K~~iv~~l~~~~-~~v~~~GDg~ND~~~l~~A~---vgiamg~~~-----------------------~~~ak~~-ad 763 (817)
+.-..+++.++... +.+++|||+.||++|++.|| ++|++|++. .+..+.. ||
T Consensus 164 ~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 243 (267)
T 1swv_A 164 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 243 (267)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCc
Confidence 55567788888777 88999999999999999999 678888431 2334444 99
Q ss_pred EEeccCCccHHHHHHHH
Q 003468 764 MVLADDNFGTIVAAVGE 780 (817)
Q Consensus 764 ~vl~~~~~~~i~~~i~~ 780 (817)
+++.+ +..+...+..
T Consensus 244 ~v~~~--~~el~~~l~~ 258 (267)
T 1swv_A 244 FTIET--MQELESVMEH 258 (267)
T ss_dssp EEESS--GGGHHHHHHH
T ss_pred eeccC--HHHHHHHHHH
Confidence 99854 7777777643
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.8e-07 Score=92.98 Aligned_cols=122 Identities=16% Similarity=0.173 Sum_probs=83.2
Q ss_pred cHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCccc
Q 003468 634 REEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRH 713 (817)
Q Consensus 634 r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 713 (817)
.+++.+.++.+++.|++++++|+..........+.+|+..... ..+..++. . .....|.-
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----------~------~~k~~~~~ 150 (225)
T 3d6j_A 91 FPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD----IIIGGEDV----------T------HHKPDPEG 150 (225)
T ss_dssp CTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS----EEECGGGC----------S------SCTTSTHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee----eeeehhhc----------C------CCCCChHH
Confidence 5789999999999999999999999888888888888753211 11111100 0 00112233
Q ss_pred HHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe----CCCccHHHHhh-cCEEeccCCccHHHHHH
Q 003468 714 KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM----GIAGTEVAKEA-SDMVLADDNFGTIVAAV 778 (817)
Q Consensus 714 K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam----g~~~~~~ak~~-ad~vl~~~~~~~i~~~i 778 (817)
-..+++.++...+.+++|||+.||++|++.||++++| ++ ..+..+.. ||+++.+ +..+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~-~~~~l~~~~ad~v~~~--~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMT-TAQEFQAYPYDRIIST--LGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSC-CTTGGGGSCCSEEESS--GGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCC-ChHHHhhcCCCEEECC--HHHHHHhh
Confidence 3566777777778899999999999999999999887 53 33333444 8999865 55555554
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.35 E-value=3.4e-07 Score=89.51 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=84.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++.|++++++|+....... ..+.+|+.... ...+..++. -.....|+
T Consensus 86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f----~~~~~~~~~----------------~~~Kp~~~ 144 (207)
T 2go7_A 86 LMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF----TEILTSQSG----------------FVRKPSPE 144 (207)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE----EEEECGGGC----------------CCCTTSSH
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe----eeEEecCcC----------------CCCCCCcH
Confidence 5789999999999999999999999988887 88888874311 111111000 00012244
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
--..+++.++...+.+++|||+.||++|++.||++ |+|+ ++.+ .||+++.+ +..+...+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~~----~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQA--LADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECSS--TTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCCC----CCCEEeCC--HHHHHHHH
Confidence 44677788887788999999999999999999998 8888 4442 68998864 56665544
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.34 E-value=8.2e-07 Score=91.55 Aligned_cols=127 Identities=12% Similarity=0.062 Sum_probs=89.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... ....+..++. . .....|
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~----------~------~~kp~~ 171 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT---PASTVFATDV----------V------RGRPFP 171 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC---CSEEECGGGS----------S------SCTTSS
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC---CceEecHHhc----------C------CCCCCH
Confidence 46789999999999999999999999999888888888875320 0111111110 0 001223
Q ss_pred ccHHHHHHHHhcCC-CEEEEEcCCccCHHHhhhCC---ceEEeCCC-----------------------ccHHHH-hhcC
Q 003468 712 RHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLAD---IGVAMGIA-----------------------GTEVAK-EASD 763 (817)
Q Consensus 712 ~~K~~iv~~l~~~~-~~v~~~GDg~ND~~~l~~A~---vgiamg~~-----------------------~~~~ak-~~ad 763 (817)
.--..+++.++... +.+++|||+.||+.|.+.|| ++|++|.+ ..+..+ ..||
T Consensus 172 ~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad 251 (277)
T 3iru_A 172 DMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAH 251 (277)
T ss_dssp HHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCC
Confidence 34466788888888 89999999999999999999 56777732 123334 4499
Q ss_pred EEeccCCccHHHHHHH
Q 003468 764 MVLADDNFGTIVAAVG 779 (817)
Q Consensus 764 ~vl~~~~~~~i~~~i~ 779 (817)
+++.+ +..+..++.
T Consensus 252 ~v~~~--~~el~~~l~ 265 (277)
T 3iru_A 252 YVIDS--VADLETVIT 265 (277)
T ss_dssp EEESS--GGGTHHHHH
T ss_pred EEecC--HHHHHHHHH
Confidence 99965 777777764
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.33 E-value=3.6e-07 Score=91.35 Aligned_cols=125 Identities=16% Similarity=0.239 Sum_probs=90.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-.. .+..++. . .....|
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~----~~~~~~~----------~------~~kp~~ 155 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH----LISVDEV----------R------LFKPHQ 155 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE----EEEGGGT----------T------CCTTCH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce----eEehhhc----------c------cCCCCh
Confidence 5678999999999999999999999999999999999998532110 1111000 0 001223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC---CccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI---AGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~---~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++...+.+++|||+.||+.|.+.||++++|-+ +..+..+..+|+++.+ +..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD--VGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESS--HHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCC--HHHHHHHH
Confidence 34456777777777899999999999999999999999922 3344446789999865 66665544
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.33 E-value=8.1e-07 Score=89.01 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=82.1
Q ss_pred CcHHHHHHHHHHHHc-CCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 633 PREEVRQAIEDCKAA-GIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+.|++.++++.|++. |+++.++|+.....+....+.+|+...-. ....+.+. ..+..|
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~-----------------~~~~k~ 152 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP----FGAFADDA-----------------LDRNEL 152 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS----CEECTTTC-----------------SSGGGH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC----cceecCCC-----------------cCccch
Confidence 568999999999999 99999999999988888888888853211 01111000 000001
Q ss_pred --ccHHHHHHHHh--cCCCEEEEEcCCccCHHHhhhCC---ceEEeCCCccHHHHh-hcCEEeccCCccHHHHHH
Q 003468 712 --RHKQEIVRLLK--EDGEVVAMTGDGVNDAPALKLAD---IGVAMGIAGTEVAKE-ASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 --~~K~~iv~~l~--~~~~~v~~~GDg~ND~~~l~~A~---vgiamg~~~~~~ak~-~ad~vl~~~~~~~i~~~i 778 (817)
.--..+.+.++ ...+.+++|||+.||++|.+.|| ++|++|....+..+. .||+++.+ +..+...+
T Consensus 153 ~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 153 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 11134456666 56678999999999999999999 556666333333333 38999865 55555555
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.2e-07 Score=92.01 Aligned_cols=126 Identities=12% Similarity=0.121 Sum_probs=93.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|++++++|+.....+..+.+.+|+...-.. .+..++. -.....|
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~----~~~~~~~----------------~~~kp~~ 158 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH----VLSVDAV----------------RLYKTAP 158 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE----EEEGGGT----------------TCCTTSH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE----EEEeccc----------------CCCCcCH
Confidence 4678999999999999999999999999999999999988542111 1111000 0011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe----CCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM----GIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam----g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
+--..+++.++...+.+++|||+.||+.|.+.||++++| + ++.+..+..||+++.+ +..+...+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~~--~~el~~~l~~ 228 (233)
T 3umb_A 159 AAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGHD--MRDLLQFVQA 228 (233)
T ss_dssp HHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEESS--HHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEECC--HHHHHHHHHH
Confidence 344567777877778999999999999999999999999 6 3444447789999865 7888887754
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.31 E-value=4.2e-07 Score=89.43 Aligned_cols=120 Identities=16% Similarity=0.167 Sum_probs=87.5
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++.|++++++|+.....+....+.+|+...-. ..+..++. -.....|+
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------------~~~kp~~~ 149 (214)
T 3e58_A 90 IFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD----IVLSGEEF----------------KESKPNPE 149 (214)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEGGGC----------------SSCTTSSH
T ss_pred cCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee----eEeecccc----------------cCCCCChH
Confidence 57899999999999999999999999999999999999853211 11111000 00112344
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCc-cHHHHhhcCEEeccCCccHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAG-TEVAKEASDMVLADDNFGTI 774 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~-~~~ak~~ad~vl~~~~~~~i 774 (817)
--..+++.++...+.+++|||+.||+.|.+.||++++|.+++ ....+..||+++.+ +..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el 210 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDV 210 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHH
Confidence 446777888877889999999999999999999998887543 33334778999865 4444
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.31 E-value=1.1e-06 Score=87.94 Aligned_cols=124 Identities=19% Similarity=0.226 Sum_probs=91.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
.+.|++.++++.|++. +++.++|+.....+....+.+|+...- ...+..++. . .....|
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f----~~~~~~~~~----------~------~~kp~~ 158 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF----DSITTSEEA----------G------FFKPHP 158 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEHHHH----------T------BCTTSH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc----ceeEecccc----------C------CCCcCH
Confidence 4568999999999999 999999999999999999999885321 111111110 0 011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCC---ceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLAD---IGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~---vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+--..+++.++...+.+++|||+. ||+.|.+.|| ++|++| ++.+..+..||+++.+ +..+...++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~--~~el~~~l~ 227 (234)
T 3u26_A 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSD--LREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESS--THHHHHHHH
T ss_pred HHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCC--HHHHHHHHH
Confidence 344667778887788999999997 9999999999 678888 4555557799999965 777777764
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.30 E-value=7.3e-07 Score=89.30 Aligned_cols=124 Identities=10% Similarity=0.136 Sum_probs=87.4
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCC---HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDN---KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA 709 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 709 (817)
+.+++.++++.|++.|+++.++|+.. ........+.+|+...- ...+..++.. ....
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~----------------~~kp 159 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI----DKTFFADEVL----------------SYKP 159 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC----SEEEEHHHHT----------------CCTT
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh----hhheeccccC----------------CCCC
Confidence 46899999999999999999999999 88888888888875311 1111111110 0012
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceEEe---CCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGVAM---GIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiam---g~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.|+--..+++.++...+.+++|||+. ||+.|++.||++++| | +..+..+..+|+++.+ +..+...++
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~--~~el~~~l~ 230 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIPS--IANLKDVIE 230 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEESS--GGGHHHHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHhh--HHHHHHHHH
Confidence 23444556777777778999999999 999999999999999 5 2333334568888754 777776663
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.2e-06 Score=87.58 Aligned_cols=115 Identities=11% Similarity=0.130 Sum_probs=85.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe----
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR---- 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r---- 708 (817)
+.|++.++++.|++.|++++++|+.....+....+.+|+...- +..+.+.
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--------------------------~~i~~~~~~~~ 157 (231)
T 3kzx_A 104 LNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--------------------------DSIIGSGDTGT 157 (231)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--------------------------SEEEEETSSSC
T ss_pred ECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--------------------------eeEEcccccCC
Confidence 5789999999999999999999999999999999999985311 1112221
Q ss_pred --cCcccHHHHHHHHhcCCC-EEEEEcCCccCHHHhhhCCc-eEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 709 --AEPRHKQEIVRLLKEDGE-VVAMTGDGVNDAPALKLADI-GVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 709 --~~p~~K~~iv~~l~~~~~-~v~~~GDg~ND~~~l~~A~v-giamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..|+--..+++.++...+ .+++|||+.||+.|.+.||+ +|+|+ ++.+ ..+++++.+ +..+...+.
T Consensus 158 ~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~~--~~el~~~l~ 226 (231)
T 3kzx_A 158 IKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFKN--FYDIRNFIC 226 (231)
T ss_dssp CTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEESS--HHHHHHHHH
T ss_pred CCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeCC--HHHHHHHHH
Confidence 223334667778877777 89999999999999999997 67787 4443 357777754 777776663
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=5.4e-07 Score=93.50 Aligned_cols=129 Identities=13% Similarity=0.141 Sum_probs=89.6
Q ss_pred CCcHHHHHHHHHHHHcCC--eEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec
Q 003468 632 PPREEVRQAIEDCKAAGI--RVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi--~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 709 (817)
++.|++.++++.|++.|+ +++++|+.....+....+.+|+...-..+ +..++. .........
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v----~~~~~~------------~~~~~~~Kp 205 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL----TYCDYS------------RTDTLVCKP 205 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEE----ECCCCS------------SCSSCCCTT
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceE----EEeccC------------CCcccCCCc
Confidence 578999999999999999 99999999999999999999985421111 000000 000001122
Q ss_pred CcccHHHHHHHHhcCC-CEEEEEcCCccCHHHhhhCCceEEeCCCccHHH-----HhhcCEEeccCCccHHHHHH
Q 003468 710 EPRHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVA-----KEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~-~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~a-----k~~ad~vl~~~~~~~i~~~i 778 (817)
.|+--..+++.++... +.+++|||+.||+.|.+.||+|++|++...... ...||+++.+ +..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~s--l~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--ILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESS--GGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCC--HHHHHHHh
Confidence 3333456677777777 899999999999999999999999985443321 3378898865 66555443
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.3e-06 Score=84.59 Aligned_cols=106 Identities=20% Similarity=0.160 Sum_probs=74.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
.+.|++.+.++.|++.|++++++|+.....+..+++.+|+... ....+ ...+..+..+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~----~~~~~---------------~~~~~~~~g~~~~ 152 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL----IATDP---------------EYRDGRYTGRIEG 152 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE----EECEE---------------EEETTEEEEEEES
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE----EEcce---------------EEECCEEeeeecC
Confidence 4799999999999999999999999999999999999998521 00000 0001111111
Q ss_pred --cCcccHHHHHHH----Hh---cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH
Q 003468 709 --AEPRHKQEIVRL----LK---EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV 757 (817)
Q Consensus 709 --~~p~~K~~iv~~----l~---~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ 757 (817)
..+..|...++. ++ ...+.++++||+.||++|++.|++++++. .....
T Consensus 153 ~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~-~~~~l 209 (232)
T 3fvv_A 153 TPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN-PSPGL 209 (232)
T ss_dssp SCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES-CCHHH
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC-cCHHH
Confidence 123456544443 33 33478999999999999999999999996 44443
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.22 E-value=2e-06 Score=82.44 Aligned_cols=126 Identities=20% Similarity=0.168 Sum_probs=83.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCH---------------hhHHHHHHHhC--CCCCCccccccccChhHHHHHHHH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNK---------------NTAEAICREIG--VFGAHEDISSQSITGKEFMDIHNQ 694 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~~ 694 (817)
++.|++.++++.|+++|++++++|+... ..+....+.+| +.. +......+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----~~~~~~~~~-------- 94 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA----IFMCPHGPD-------- 94 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE----EEEECCCTT--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEEcCCCCC--------
Confidence 4789999999999999999999999985 44455566666 311 000000000
Q ss_pred hHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc---eEEeCCCccHHHH----hhcCEEec
Q 003468 695 KNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GVAMGIAGTEVAK----EASDMVLA 767 (817)
Q Consensus 695 ~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamg~~~~~~ak----~~ad~vl~ 767 (817)
...-.....|+--..+++.++...+.+++|||+.||+.|.+.||+ +|++| .+..... ..+|+++.
T Consensus 95 -------~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v~~ 166 (179)
T 3l8h_A 95 -------DGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRVCE 166 (179)
T ss_dssp -------SCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEEES
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEEec
Confidence 000001122333356777788778899999999999999999995 77777 3444333 45799886
Q ss_pred cCCccHHHHHHH
Q 003468 768 DDNFGTIVAAVG 779 (817)
Q Consensus 768 ~~~~~~i~~~i~ 779 (817)
+ +..+...+.
T Consensus 167 ~--l~el~~~l~ 176 (179)
T 3l8h_A 167 D--LAAVAEQLL 176 (179)
T ss_dssp S--HHHHHHHHH
T ss_pred C--HHHHHHHHH
Confidence 5 777776663
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=4.2e-06 Score=82.65 Aligned_cols=136 Identities=18% Similarity=0.113 Sum_probs=85.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCH---------------hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNK---------------NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKN 696 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (817)
++.|++.++++.|+++|++++++|+... ..+..+.+.+|+.- ...+.......... .
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-~~~~~~~~~~~~~~-------~ 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL-DGIYYCPHHPQGSV-------E 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC-SEEEEECCBTTCSS-------G
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce-EEEEECCcCCCCcc-------c
Confidence 6789999999999999999999999994 56677777888741 00000000000000 0
Q ss_pred hhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc----eEEeCCCccHHHHhhcCEEeccCCcc
Q 003468 697 YLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI----GVAMGIAGTEVAKEASDMVLADDNFG 772 (817)
Q Consensus 697 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v----giamg~~~~~~ak~~ad~vl~~~~~~ 772 (817)
.. ..........|+--..+++.++...+.++||||+.||+.|.+.|++ +|..|....+.....+|+++.+ +.
T Consensus 122 ~~--~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~--l~ 197 (211)
T 2gmw_A 122 EF--RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LA 197 (211)
T ss_dssp GG--BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GG
T ss_pred cc--CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCC--HH
Confidence 00 0000001123444456677777777889999999999999999995 4444533334444568999864 77
Q ss_pred HHHHHHH
Q 003468 773 TIVAAVG 779 (817)
Q Consensus 773 ~i~~~i~ 779 (817)
.+...+.
T Consensus 198 el~~~l~ 204 (211)
T 2gmw_A 198 DLPQAIK 204 (211)
T ss_dssp GHHHHHH
T ss_pred HHHHHHH
Confidence 7777663
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.19 E-value=8.6e-07 Score=89.76 Aligned_cols=123 Identities=20% Similarity=0.254 Sum_probs=86.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|++++++|+.....+..+.+.+|+...- ...+.+++. ......|
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~----------------~~~Kp~~ 173 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF----SEMLGGQSL----------------PEIKPHP 173 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC----SEEECTTTS----------------SSCTTSS
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE----EEEEecccC----------------CCCCcCH
Confidence 46788999999999999999999999999999999999985311 111111100 0011224
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE-eCC--C-ccHHHHhhcCEEeccCCccHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA-MGI--A-GTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia-mg~--~-~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
+--..+++.++...+.+++|||+.||++|++.||++++ +.. + +.+..+..||+++.+ +..+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~--~~el~~ 240 (243)
T 2hsz_A 174 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILK 240 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGG
T ss_pred HHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC--HHHHHH
Confidence 44566777787777889999999999999999999844 331 1 234456789999864 555443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.7e-06 Score=85.85 Aligned_cols=117 Identities=13% Similarity=0.240 Sum_probs=84.2
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe----
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR---- 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r---- 708 (817)
+.|++.++++.|+++|+++.++|+.....+..+.+.+|+. .- ...+.+.
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f--------------------------~~~~~~~~~~~ 163 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF--------------------------DFALGEKSGIR 163 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC--------------------------SEEEEECTTSC
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce--------------------------eEEEecCCCCC
Confidence 4588999999999999999999999888888888888874 21 1111121
Q ss_pred --cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce---EEeCCCccHHHH-hhcCEEeccCCccHHHHHH
Q 003468 709 --AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---VAMGIAGTEVAK-EASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 709 --~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg---iamg~~~~~~ak-~~ad~vl~~~~~~~i~~~i 778 (817)
..|+-=..+++.++-..+.+++|||+.||+.|.+.||+. |++|....+..+ ..||+++.+ +..+...+
T Consensus 164 ~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~--~~el~~~l 237 (240)
T 2hi0_A 164 RKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDT--AEKLEEAI 237 (240)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECS--HHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECC--HHHHHHHh
Confidence 123333566777777788999999999999999999994 556632323333 468988854 66655544
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.18 E-value=7.7e-06 Score=82.41 Aligned_cols=125 Identities=15% Similarity=0.169 Sum_probs=86.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+....+.+|+...-. ..+..++. . .....|
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------~------~~Kp~~ 153 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE----HVIISDFE----------G------VKKPHP 153 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCS----EEEEGGGG----------T------CCTTCH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhcc----EEEEeCCC----------C------CCCCCH
Confidence 357899999999999999999999999888888889998753211 11111100 0 001223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceEEe---CCCccHHHHh---hcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGVAM---GIAGTEVAKE---ASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiam---g~~~~~~ak~---~ad~vl~~~~~~~i~~~i~ 779 (817)
+--..+++.++...+.+++|||+. ||+.|.+.||+++++ | .+...... .+|+++.+ +..+...+.
T Consensus 154 ~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~~--~~el~~~l~ 225 (241)
T 2hoq_A 154 KIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEIDN--LESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEESS--TTHHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEECC--HHHHHHHHH
Confidence 333556777777778899999998 999999999998654 4 23333332 68998865 777776663
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.17 E-value=1.5e-06 Score=86.59 Aligned_cols=129 Identities=19% Similarity=0.323 Sum_probs=85.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE- 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~- 710 (817)
++.|++.++++.|+++|++++++|+.....+..+.+.+|+... .+....+. + .....+.+...
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~~~~-------------~-~~~~~~~~~~~~ 149 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLK-------------F-YFNGEYAGFDET 149 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEE-------------E-CTTSCEEEECTT
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEeeeEE-------------E-cCCCcEecCCCC
Confidence 5789999999999999999999999999999999999998531 01000000 0 00011112111
Q ss_pred -----cccHHHHHHHHhcC-C-CEEEEEcCCccCHHHhhhCCceEEeCCCc-cHHHHhhcCEEeccCCccHHHHHH
Q 003468 711 -----PRHKQEIVRLLKED-G-EVVAMTGDGVNDAPALKLADIGVAMGIAG-TEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 711 -----p~~K~~iv~~l~~~-~-~~v~~~GDg~ND~~~l~~A~vgiamg~~~-~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+..|..+++.+.+. | +.++++||+.||++|.+.||++|+++... .+.....+|+++.+ +..+...+
T Consensus 150 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (225)
T 1nnl_A 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLGEL 223 (225)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC--
T ss_pred CcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHHHH
Confidence 23565555443222 2 67999999999999999999999988432 23445678998864 65554443
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.16 E-value=1.6e-06 Score=86.40 Aligned_cols=125 Identities=18% Similarity=0.220 Sum_probs=88.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-. ..+.+++. ......|
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~----------------~~~Kp~~ 142 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD----LIVGGDTF----------------GEKKPSP 142 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----EEECTTSS----------------CTTCCTT
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe----EEEecCcC----------------CCCCCCh
Confidence 457899999999999999999999999998999999999743111 11111100 0011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCC-CccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGI-AGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~-~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+-...+++.++...+.+++|||+.||++|.+.||+. |++.. .+.... ..+|+++.+ +..+...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~--~~el~~~l~ 209 (222)
T 2nyv_A 143 TPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSR--PSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESS--TTHHHHHHH
T ss_pred HHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECC--HHHHHHHHH
Confidence 555677778877778899999999999999999988 55542 112211 568888864 777777664
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=2.4e-06 Score=86.17 Aligned_cols=124 Identities=11% Similarity=0.130 Sum_probs=86.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|++++++|+.....+..+.+.+|+..... ..+..++. . .....|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------~------~~Kp~~ 164 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD----SCLSADDL----------K------IYKPDP 164 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEGGGT----------T------CCTTSH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcC----EEEEcccc----------C------CCCCCH
Confidence 467999999999999999999999999999999999999853211 11111100 0 011233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce---EEeCCCccHHHHhhc-CEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---VAMGIAGTEVAKEAS-DMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg---iamg~~~~~~ak~~a-d~vl~~~~~~~i~~~i 778 (817)
+--..+++.++...+.+++|||+.||+.|.+.||+. +..|.. .+..+..+ |+++.+ +..+...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~~~~~~~~~--~~el~~~l 232 (240)
T 2no4_A 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGN-PPEYEFAPLKHQVNS--LSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCC-CCCCTTSCCSEEESS--GGGHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCC-CCcccCCCCceeeCC--HHHHHHHH
Confidence 444566777777778899999999999999999955 444532 33334557 988864 77776655
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=3.3e-06 Score=84.73 Aligned_cols=124 Identities=10% Similarity=0.074 Sum_probs=89.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+ .|++++++|+.....+....+.+|+...-. ..+..++. . .....|
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------~------~~kp~~ 165 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK----KIILSEDL----------G------VLKPRP 165 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS----EEEEGGGT----------T------CCTTSH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce----eEEEeccC----------C------CCCCCH
Confidence 45789999999999 999999999999988888889998853211 11111000 0 001223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceEEeCCCccH-HHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGVAMGIAGTE-VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiamg~~~~~-~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++...+.+++|||+. ||+.|.+.||++++|.+.+.. ..+..+|+++.+ +..+..+.
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~~ 232 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNLL 232 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHHT
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHHH
Confidence 333556677777778999999995 999999999999999966652 346679999976 66666554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.13 E-value=2.7e-06 Score=85.94 Aligned_cols=126 Identities=13% Similarity=0.170 Sum_probs=86.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+....+. |+...-.. ..++.+++ .-.....|
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--d~i~~~~~----------------~~~~kp~~ 169 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHK--ELMVTAFD----------------VKYGKPNP 169 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCG--GGEECTTT----------------CSSCTTSS
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCc--ceEEeHHh----------------CCCCCCCh
Confidence 4678999999999999999999999987777766666 77532100 01111110 00012234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCccH----HHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGTE----VAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~~----~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+--..+++.++...+.+++|||+.||+.|.+.||++ |++. .+.. ..+..||+++.+ +..+...++
T Consensus 170 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~s--~~el~~~l~ 239 (243)
T 3qxg_A 170 EPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFPS--MQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEESC--HHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 445667777777788999999999999999999995 4454 3332 223469999865 777777664
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.13 E-value=3.2e-06 Score=85.41 Aligned_cols=126 Identities=12% Similarity=0.126 Sum_probs=83.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|++++++|+.....+....+. |+...-.. ...+.+++. -.....|
T Consensus 108 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--~~~~~~~~~----------------~~~kp~~ 168 (247)
T 3dv9_A 108 ERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA--NLMVTAFDV----------------KYGKPNP 168 (247)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG--GGEECGGGC----------------SSCTTSS
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC--CeEEecccC----------------CCCCCCC
Confidence 5678999999999999999999999988777777776 77532100 111111110 0011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCccH----HHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGTE----VAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~~----~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+--..+++.++...+.+++|||+.||+.|.+.||++ |++. .+.. ..+..||+++.+ +..+...++
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFHS--MPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 445677888888888999999999999999999975 3343 3322 223479999865 777776664
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.13 E-value=3.4e-06 Score=84.17 Aligned_cols=118 Identities=11% Similarity=0.081 Sum_probs=84.5
Q ss_pred CCcHHHHHHHHHHHHcC-CeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAG-IRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++++.|++.| +++.++|+..........+.+|+.... ..+++...
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f---------------------------~~~~~~~k 157 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF---------------------------DHIEVMSD 157 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC---------------------------SEEEEESC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh---------------------------heeeecCC
Confidence 45788999999999999 999999999888888888999884321 11223333
Q ss_pred c--ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceEEe-------CCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 711 P--RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGVAM-------GIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 711 p--~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiam-------g~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
| +--..+++.++...+.+++|||+. ||+.|.+.||++++| |+...+.....+|+++.+ +..+...+
T Consensus 158 pk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~--l~el~~~l 233 (234)
T 3ddh_A 158 KTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKR--LDDLLSLL 233 (234)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSS--GGGHHHHC
T ss_pred CCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceeccc--HHHHHHhc
Confidence 3 333556777777788999999996 999999999999887 322222222334888765 66666543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=2.1e-06 Score=84.69 Aligned_cols=116 Identities=12% Similarity=0.145 Sum_probs=83.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|++ |+++.++|+.....+....+.+|+.... ...+.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--------------------------~~i~~~~~~~ 136 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--------------------------DGIYGSSPEA 136 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--------------------------SEEEEECSSC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--------------------------eeeecCCCCC
Confidence 356899999999999 9999999999888888888899985321 1222222
Q ss_pred -cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc---eEEeCCCccHHHH-hhcCEEeccCCccHHHH
Q 003468 709 -AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GVAMGIAGTEVAK-EASDMVLADDNFGTIVA 776 (817)
Q Consensus 709 -~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamg~~~~~~ak-~~ad~vl~~~~~~~i~~ 776 (817)
..|+-=..+++.++-..+.+++|||+.||+.|.+.||+ +|++|++..+..+ ..+|+++.+ +..+..
T Consensus 137 Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 137 PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred CCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 11222234555666667889999999999999999999 7888843344444 368999865 555544
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.11 E-value=2.9e-06 Score=86.62 Aligned_cols=127 Identities=14% Similarity=0.079 Sum_probs=89.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcccccc-ccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQ-SITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.+++.++++.|++.|++++++|+.....+..+.+.+|+...- .. .+..++.. ......
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~i~~~~~~~---------------~~~Kp~ 170 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA----GEHIYDPSWVG---------------GRGKPH 170 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH----CSCEECGGGGT---------------TCCTTS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc----cceEEeHhhcC---------------cCCCCC
Confidence 35688999999999999999999999999999999999874210 01 11111100 001122
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCc-------c-HHHHhhcCEEeccCCccHHHHHHHH
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAG-------T-EVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~-------~-~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
|+--..+++.++...+.+++|||+.||+.|.+.||++ |.+. .+ . +..+..||+++.+ +..+...++.
T Consensus 171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~~--l~el~~~l~~ 246 (259)
T 4eek_A 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLTS--HAELRAALAE 246 (259)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEECS--HHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhCC--HHHHHHHHHh
Confidence 3344667777777778999999999999999999998 4453 22 2 2334559999865 8888888754
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.11 E-value=2.8e-06 Score=87.71 Aligned_cols=115 Identities=12% Similarity=0.044 Sum_probs=82.4
Q ss_pred CcHHHHHHHHHHHHc-CCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 633 PREEVRQAIEDCKAA-GIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+..- ...+.+++. . .....|
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f-----~~i~~~~~~----------~------~~kp~~ 173 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRP-----EYFITANDV----------K------QGKPHP 173 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCC-----SSEECGGGC----------S------SCTTSS
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCcc-----CEEEEcccC----------C------CCCCCh
Confidence 468999999999999 999999999999998888888887421 111222110 0 001234
Q ss_pred ccHHHHHHHHhc-------CCCEEEEEcCCccCHHHhhhCCceEEe---CCCccHHHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKE-------DGEVVAMTGDGVNDAPALKLADIGVAM---GIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~-------~~~~v~~~GDg~ND~~~l~~A~vgiam---g~~~~~~ak~~ad~vl~~ 768 (817)
+--..+++.++. ..+.+++|||+.||++|++.||++++| |++..+..+..||+++.+
T Consensus 174 ~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 174 EPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 444667777777 778899999999999999999977666 534333433469999865
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.11 E-value=1.3e-06 Score=87.43 Aligned_cols=125 Identities=12% Similarity=0.186 Sum_probs=87.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..... ..+..++. -.....|
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------------~~~Kp~~ 154 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD----HLLSVDPV----------------QVYKPDN 154 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEESGGG----------------TCCTTSH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhh----eEEEeccc----------------CCCCCCH
Confidence 467999999999999999999999999998888999998853211 01111000 0011233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCC---ccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIA---GTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~---~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++...+.+++|||+.||+.|.+.||++++|-+. ..+..+..+|+++.+ +..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 222 (232)
T 1zrn_A 155 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVELF 222 (232)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTTC
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 444567777777778899999999999999999999988322 223335678988854 66665544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=5.1e-07 Score=88.95 Aligned_cols=120 Identities=12% Similarity=0.152 Sum_probs=83.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++. +++.++|+.....+..+.+.+|+...- ...+..++. -.....|
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~----------------~~~KP~~ 141 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM----AVTISADDT----------------PKRKPDP 141 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE----EEEECGGGS----------------SCCTTSS
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc----cEEEecCcC----------------CCCCCCc
Confidence 3578999999999999 999999999988888888888874210 111111100 0001123
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC---CccHHHHhhcCEEeccCCccHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI---AGTEVAKEASDMVLADDNFGTIV 775 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~---~~~~~ak~~ad~vl~~~~~~~i~ 775 (817)
+--..+++.++...+.+++|||+.||++|.+.||++++|.+ ...+..++ ||+++.+ +..+.
T Consensus 142 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~ 205 (209)
T 2hdo_A 142 LPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDIL 205 (209)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGG
T ss_pred HHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHH
Confidence 33466777777777899999999999999999999999753 22344455 9999864 44443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.05 E-value=4e-06 Score=90.17 Aligned_cols=107 Identities=13% Similarity=0.175 Sum_probs=73.1
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC--CccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA--HEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
-.+.|++++.|+.|+++|++|+|+||.....++.+|+++|+... .+.+....+. ...+..+-.+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~--------------~~~dG~~tg~ 285 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLM--------------KDDEGKILPK 285 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEE--------------ECTTCCEEEE
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEE--------------EecCCceeee
Confidence 34789999999999999999999999999999999999987321 1111111000 0001122222
Q ss_pred -------cCcccHHHHHHHHhcC---CCEEEEEcCCccCHHHhhh-CCceEEeC
Q 003468 709 -------AEPRHKQEIVRLLKED---GEVVAMTGDGVNDAPALKL-ADIGVAMG 751 (817)
Q Consensus 709 -------~~p~~K~~iv~~l~~~---~~~v~~~GDg~ND~~~l~~-A~vgiamg 751 (817)
+..+.|...++.+... ...++|+|||.||.+||+. +|.++++.
T Consensus 286 ~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~li 339 (385)
T 4gxt_A 286 FDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLI 339 (385)
T ss_dssp ECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEE
T ss_pred ecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEE
Confidence 2346788888776432 2458899999999999986 56555543
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=2.8e-05 Score=71.69 Aligned_cols=143 Identities=12% Similarity=0.214 Sum_probs=84.6
Q ss_pred CCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCC
Q 003468 384 KTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASG 463 (817)
Q Consensus 384 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 463 (817)
..||+|-|++.+..+...+. + .. ..++.+++.... .+.
T Consensus 13 ~~~tit~gnr~vt~v~~~~g--------------~--------------~e---~elL~lAAs~E~-----------~Se 50 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG--------------V--------------DE---KTLADAAQLASL-----------ADE 50 (156)
T ss_dssp --------CEEEEEEEECTT--------------S--------------CH---HHHHHHHHHTTS-----------SCC
T ss_pred CCCceecCCCeEEEEEecCC--------------C--------------CH---HHHHHHHHHHhC-----------cCC
Confidence 47999999999999875421 0 11 123333333222 136
Q ss_pred ChhHHHHHHHHHHc-CCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHH
Q 003468 464 MPTEAALKVMVEKM-GFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENL 542 (817)
Q Consensus 464 ~p~e~al~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i 542 (817)
+|...|++.+++.. |+.... . ........+|++..++.++.+ +| ..+.+|+++.|
T Consensus 51 HPla~AIv~~A~~~~~l~~~~-------~------------~~~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i 106 (156)
T 1svj_A 51 TPEGRSIVILAKQRFNLRERD-------V------------QSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAI 106 (156)
T ss_dssp SHHHHHHHHHHHHHTTCCCCC-------H------------HHHTCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHH
T ss_pred CHHHHHHHHHHHHhcCCCccc-------c------------cccccceeeccccCCCCeEEE---CC--EEEEEeCcHHH
Confidence 89999999999876 653210 0 000123468888777677744 23 56889998766
Q ss_pred HhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeE
Q 003468 543 LERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLV 622 (817)
Q Consensus 543 l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~ 622 (817)
.+.+... |. .+. ..+.+.+++++.+|.+++.+|. |..
T Consensus 107 ~~l~~~~----gi--~~~----~~~~~~~~~la~~G~T~v~VA~---------------------------------d~~ 143 (156)
T 1svj_A 107 RRHVEAN----GG--HFP----TDVDQKVDQVARQGATPLVVVE---------------------------------GSR 143 (156)
T ss_dssp HHHHHHH----TC--CCC----HHHHHHHHHHHHTTCEEEEEEE---------------------------------TTE
T ss_pred HHHHHHc----CC--CCc----HHHHHHHHHHHhCCCCEEEEEE---------------------------------CCE
Confidence 6554321 11 111 1356677889999999999984 235
Q ss_pred EEEEeccCCCCcH
Q 003468 623 FVGMVGLRDPPRE 635 (817)
Q Consensus 623 ~lG~~~~~d~~r~ 635 (817)
++|++++.|++||
T Consensus 144 l~GvIalaD~iK~ 156 (156)
T 1svj_A 144 VLGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEEECCCC
T ss_pred EEEEEEEecCCCC
Confidence 8999999999986
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.04 E-value=7.1e-06 Score=82.18 Aligned_cols=125 Identities=11% Similarity=0.142 Sum_probs=86.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++. +++.++|+.....+....+.+|+..... ..+..++. . .....|
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------~------~~kp~~ 161 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK----DIFVSEDT----------G------FQKPMK 161 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS----EEEEGGGT----------T------SCTTCH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh----eEEEeccc----------C------CCCCCh
Confidence 4678999999999999 9999999999988888889988853211 01111000 0 001123
Q ss_pred ccHHHHHHHHh-cCCCEEEEEcCCc-cCHHHhhhCCceEEeCCCc--cHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLK-EDGEVVAMTGDGV-NDAPALKLADIGVAMGIAG--TEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~-~~~~~v~~~GDg~-ND~~~l~~A~vgiamg~~~--~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+--..+++.++ ...+.+++|||+. ||+.|.+.||++.++-+.+ .+..+..||+++.+ +..+...+.
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~--~~el~~~l~ 231 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRK--LEELYHILN 231 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESS--GGGHHHHHT
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECC--HHHHHHHHH
Confidence 33345566666 5668899999998 9999999999964432233 44456789999865 777877764
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.8e-06 Score=87.65 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=78.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHH-HHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC-REIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia-~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.+.+++.++++.|++.|+++.++|+.......... +..|+...- ...+.+++ ...-.....
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f----~~~~~~~~--------------~~~~~~Kp~ 173 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF----SHIVLGDD--------------PEVQHGKPD 173 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS----SCEECTTC--------------TTCCSCTTS
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe----eeEEecch--------------hhccCCCCC
Confidence 46889999999999999999999999876555432 222332110 00010000 000001112
Q ss_pred cccHHHHHHHHhcCC--CEEEEEcCCccCHHHhhhCC---ceEEeCCCccHHHHhhcCEEeccCCccHHH
Q 003468 711 PRHKQEIVRLLKEDG--EVVAMTGDGVNDAPALKLAD---IGVAMGIAGTEVAKEASDMVLADDNFGTIV 775 (817)
Q Consensus 711 p~~K~~iv~~l~~~~--~~v~~~GDg~ND~~~l~~A~---vgiamg~~~~~~ak~~ad~vl~~~~~~~i~ 775 (817)
|+--..+++.++... +.+++|||+.||+.|.+.|| ++|++| ++.+..+..||+++.+ +..+.
T Consensus 174 ~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~s--l~el~ 240 (250)
T 3l5k_A 174 PDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNS--LQDFQ 240 (250)
T ss_dssp THHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSC--GGGCC
T ss_pred hHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecC--HHHhh
Confidence 333345556665555 88999999999999999999 667778 4455568899999865 54443
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.00 E-value=1.3e-05 Score=79.64 Aligned_cols=123 Identities=10% Similarity=0.166 Sum_probs=83.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.+++.+.++.++. +++++|+........+.+.+|+...-. ...+..++. .. .. ....|+
T Consensus 88 ~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~---~~~~~~~~~----------~~-~~---~kpk~~ 147 (229)
T 2fdr_A 88 IIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA---PHIYSAKDL----------GA-DR---VKPKPD 147 (229)
T ss_dssp BCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT---TCEEEHHHH----------CT-TC---CTTSSH
T ss_pred cCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhcc---ceEEecccc----------cc-CC---CCcCHH
Confidence 45677888877764 899999999988888889988753110 111111111 00 00 012233
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCccH-------HHHhh-cCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGTE-------VAKEA-SDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~~-------~ak~~-ad~vl~~~~~~~i~~~i 778 (817)
--..+++.++...+.+++|||+.||++|++.||++ |+|+ ++.. ..++. ||+++.+ +..+...+
T Consensus 148 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l 219 (229)
T 2fdr_A 148 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 219 (229)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecC--HHHHHHHH
Confidence 44667777877788999999999999999999998 7776 4433 35666 9999865 66666655
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.8e-06 Score=86.28 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=89.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.+++.++++.|++. ++++++|+........+.+.+|+.- ...+..++. . .....|
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f------~~~~~~~~~----------~------~~kp~~ 176 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW------DMLLCADLF----------G------HYKPDP 176 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC------SEECCHHHH----------T------CCTTSH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc------ceEEeeccc----------c------cCCCCH
Confidence 3568999999999986 9999999999998899999999841 112222111 0 011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC----Ccc---HH--HHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI----AGT---EV--AKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~----~~~---~~--ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++...+.+++|||+.||+.|.+.||++++|.+ .|. +. .+..||+++.+ +..+...+
T Consensus 177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~--l~el~~~l 250 (254)
T 3umc_A 177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD--LLDLHRQL 250 (254)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS--HHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC--HHHHHHHh
Confidence 44466777887778899999999999999999999999985 222 12 26679999865 77777666
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.98 E-value=1.1e-05 Score=81.07 Aligned_cols=139 Identities=19% Similarity=0.181 Sum_probs=88.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|++++++|+.....+..+.+ |+... ..+......... . ........+....+.+..+
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~--~--~~~~~~~kp~p~~~~~~~~ 149 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN--D--YIHIDWPHSCKGTCSNQCG 149 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS--S--BCEEECTTCCCTTCCSCCS
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC--C--ceEEecCCCCccccccccC
Confidence 578999999999999999999999999988888877 66332 111100000000 0 0000000000000000123
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhh--cCEEeccCCccHHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEA--SDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~--ad~vl~~~~~~~i~~~i~~ 780 (817)
..|..+++.++...+.++++||+.+|++|.+.||+.++.. ...+..... +|+++. ++..+...+..
T Consensus 150 ~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 150 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred CcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 4687899999888899999999999999999999998754 222333333 677764 47888777643
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.97 E-value=6.1e-06 Score=80.57 Aligned_cols=121 Identities=9% Similarity=0.134 Sum_probs=83.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+...-. ..+.+++. . .....|
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~----------~------~~Kp~~ 131 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFK----GIFSAESV----------K------EYKPSP 131 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEGGGG----------T------CCTTCH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCc----EEEehhhc----------C------CCCCCH
Confidence 45789999 9999999 9999999999988888999999853211 11111100 0 001223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC---CccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI---AGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~---~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++ .+.+++|||+.||+.|.+.||+++++-. +..+..+..+|+++.+ +..+...+
T Consensus 132 ~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 197 (201)
T 2w43_A 132 KVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVND--FKELYEWI 197 (201)
T ss_dssp HHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESS--HHHHHHHH
T ss_pred HHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 44456667777 6789999999999999999999988721 2223334568988764 66666655
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.96 E-value=7.8e-06 Score=83.12 Aligned_cols=124 Identities=16% Similarity=0.191 Sum_probs=88.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+ |++++++|+.....+..+.+.+|+..... ..+..++. . .....|
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~----------~------~~Kp~~ 150 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD----AVISVDAK----------R------VFKPHP 150 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEGGGG----------T------CCTTSH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhcc----EEEEcccc----------C------CCCCCH
Confidence 56799999999999 99999999999999999999998753211 11111100 0 011233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCC-----------------------c---cHHHHhhcCEE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIA-----------------------G---TEVAKEASDMV 765 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~-----------------------~---~~~ak~~ad~v 765 (817)
+--..+++.++...+.+++|||+.||+.|.+.||++++|.+. + .+..+..+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (253)
T 1qq5_A 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (253)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCee
Confidence 444567777777778899999999999999999999998854 1 12234568988
Q ss_pred eccCCccHHHHHHH
Q 003468 766 LADDNFGTIVAAVG 779 (817)
Q Consensus 766 l~~~~~~~i~~~i~ 779 (817)
+.+ +..+...+.
T Consensus 231 ~~~--~~el~~~l~ 242 (253)
T 1qq5_A 231 VPA--LGDLPRLVR 242 (253)
T ss_dssp ESS--GGGHHHHHH
T ss_pred eCC--HHHHHHHHH
Confidence 854 777777663
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.94 E-value=8.7e-06 Score=82.42 Aligned_cols=124 Identities=13% Similarity=0.157 Sum_probs=90.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++. +++.++|+........+.+.+|+.- ...+..++.. . ....|
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f------~~~~~~~~~~---------~-------~kp~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW------DVIIGSDINR---------K-------YKPDP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC------SCCCCHHHHT---------C-------CTTSH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe------eEEEEcCcCC---------C-------CCCCH
Confidence 4578999999999997 9999999999999999999999841 1122222110 0 01223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCC----ccH----H-HHhhcCEEeccCCccHHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIA----GTE----V-AKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~----~~~----~-ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
+--..+++.++...+.+++|||+.||+.|.+.||++++|.+. |.. . .+..+|+++.+ +..+...+..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~--~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD--ITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS--HHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC--HHHHHHHhcC
Confidence 333556677777778999999999999999999999999852 211 1 25678999865 8888887754
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.92 E-value=1.2e-05 Score=77.57 Aligned_cols=107 Identities=15% Similarity=0.110 Sum_probs=72.5
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++.|++++++|+... .+....+.+|+...- ...+.+++. -.....|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f----~~~~~~~~~----------------~~~kp~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF----TEVVTSSSG----------------FKRKPNPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE----EEEECGGGC----------------CCCTTSCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe----eeeeecccc----------------CCCCCCHH
Confidence 578999999999999999999998764 566777788874311 111111100 00112234
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcC
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASD 763 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad 763 (817)
--..+++.++.. .+++|||+.||++|++.||+++++.+.+ ...++..+
T Consensus 142 ~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~-~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSI-VNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCH-HHHHHHHT
T ss_pred HHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCC-CChhhccC
Confidence 345566666655 8999999999999999999999988444 44455443
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=2.2e-05 Score=79.40 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=39.1
Q ss_pred cHHHHHHHHhcCCCEEEEEcC----CccCHHHhhhCC-ceEEeCCCccHHHHhhcCE
Q 003468 713 HKQEIVRLLKEDGEVVAMTGD----GVNDAPALKLAD-IGVAMGIAGTEVAKEASDM 764 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GD----g~ND~~~l~~A~-vgiamg~~~~~~ak~~ad~ 764 (817)
.|..-++.+.+..+.|++||| |.||.+||+.|+ +|++|+ ++.+..|..+.+
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~ 242 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKI 242 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHH
Confidence 455555555445678999999 699999999996 899999 677777765543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.2e-05 Score=80.50 Aligned_cols=123 Identities=13% Similarity=0.137 Sum_probs=84.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++ |+++.++|+..........+.++-. +..++...++. .....|
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~------fd~i~~~~~~~----------------~~KP~~ 155 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE------FDHIITAQDVG----------------SYKPNP 155 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC------CSEEEEHHHHT----------------SCTTSH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc------cCEEEEccccC----------------CCCCCH
Confidence 568899999999999 8999999999888777766654421 11112221110 011234
Q ss_pred ccHHHH---HHHHhcCCCEEEEEcCCc-cCHHHhhhCCceEEeCCCc----------cHHHHhhcCEEeccCCccHHHHH
Q 003468 712 RHKQEI---VRLLKEDGEVVAMTGDGV-NDAPALKLADIGVAMGIAG----------TEVAKEASDMVLADDNFGTIVAA 777 (817)
Q Consensus 712 ~~K~~i---v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiamg~~~----------~~~ak~~ad~vl~~~~~~~i~~~ 777 (817)
+-.... ++.++...+.+++|||+. ||+.|.+.||++++|.+.+ .+..+..||+++.+ +..+...
T Consensus 156 ~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~--~~el~~~ 233 (240)
T 3smv_A 156 NNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNS--MGEMAEA 233 (240)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESS--HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCC--HHHHHHH
Confidence 433344 556666778999999996 9999999999999996432 23345789999965 7777776
Q ss_pred HH
Q 003468 778 VG 779 (817)
Q Consensus 778 i~ 779 (817)
+.
T Consensus 234 l~ 235 (240)
T 3smv_A 234 HK 235 (240)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.86 E-value=1.5e-05 Score=81.67 Aligned_cols=62 Identities=16% Similarity=0.176 Sum_probs=44.1
Q ss_pred HHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCceEEeCCC---ccHHHHh---hcCEEeccCCccHHHHHH
Q 003468 715 QEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGVAMGIA---GTEVAKE---ASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 715 ~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgiamg~~---~~~~ak~---~ad~vl~~~~~~~i~~~i 778 (817)
..+++.++...+.++||||+ .||+.|++.||++.++.+. +.+..++ .||+++.+ +..+..-+
T Consensus 190 ~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~--~~el~~~~ 258 (266)
T 3pdw_A 190 EQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDS--LTEWIPYI 258 (266)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESS--GGGGHHHH
T ss_pred HHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCC--HHHHHHHh
Confidence 34566666667899999999 7999999999997766532 3344455 49999875 66666665
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.83 E-value=1.6e-05 Score=81.69 Aligned_cols=62 Identities=27% Similarity=0.311 Sum_probs=44.9
Q ss_pred HHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCC---ceEEeCCCccHHHH-------hhcCEEeccCCccHHHHHH
Q 003468 715 QEIVRLLKEDGEVVAMTGDG-VNDAPALKLAD---IGVAMGIAGTEVAK-------EASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 715 ~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~---vgiamg~~~~~~ak-------~~ad~vl~~~~~~~i~~~i 778 (817)
..+.+.++...+.++||||+ .||+.|.+.|+ ++|++|+...+... ..+|+++.+ +..+...+
T Consensus 194 ~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~--~~el~~~l 266 (268)
T 3qgm_A 194 REALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNS--LKDMVEAL 266 (268)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESS--HHHHHHTC
T ss_pred HHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECC--HHHHHHHH
Confidence 34556666667899999999 59999999999 78988854433322 168999865 66665544
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.83 E-value=1e-05 Score=82.76 Aligned_cols=124 Identities=18% Similarity=0.317 Sum_probs=89.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++.|+++.++|+... ....+.+.+|+...- ..++..++.. .....|+
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f----~~~~~~~~~~----------------~~Kp~~~ 165 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHF----DFVLTSEAAG----------------WPKPDPR 165 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGC----SCEEEHHHHS----------------SCTTSHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhh----hEEEeecccC----------------CCCCCHH
Confidence 568999999999999999999998765 467888888875321 1111111110 0123345
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceEEeCCCccHH-----HHhhcCEEeccCCccHHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGVAMGIAGTEV-----AKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiamg~~~~~~-----ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
--..+++.++...+.+++|||+. ||+.|.+.||++++|.+.+... ....+|+++.+ +..+...+.
T Consensus 166 ~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~--l~el~~~l~ 236 (263)
T 3k1z_A 166 IFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS--LAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESS--GGGHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCC--HHHHHHHHH
Confidence 55677788887788999999997 9999999999999998655322 22368998865 777877764
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.83 E-value=5.7e-05 Score=76.45 Aligned_cols=118 Identities=18% Similarity=0.131 Sum_probs=84.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE- 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~- 710 (817)
++.|++.++++.|+ .|+++.++|+.....+....+.+|+.... .. +++...
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f--------------------------~~-i~~~~kp 163 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF--------------------------PR-IEVVSEK 163 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC--------------------------CC-EEEESCC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC--------------------------ce-eeeeCCC
Confidence 35789999999999 99999999999988888888888874321 11 222223
Q ss_pred -cccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceEEeCCCccH--------HHHhhcCE-EeccCCccHHHHHHH
Q 003468 711 -PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGVAMGIAGTE--------VAKEASDM-VLADDNFGTIVAAVG 779 (817)
Q Consensus 711 -p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiamg~~~~~--------~ak~~ad~-vl~~~~~~~i~~~i~ 779 (817)
|+--..+++.++...+.+++|||+. ||+.|.+.||+++++=..+.. .....+|+ ++.+ +..+...+.
T Consensus 164 ~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~l~ 241 (251)
T 2pke_A 164 DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPD--PSGWPAAVR 241 (251)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSS--GGGHHHHHH
T ss_pred CHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCC--HHHHHHHHH
Confidence 3444566777777778999999999 999999999999876433321 11345787 6644 777777663
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.76 E-value=2.2e-05 Score=75.66 Aligned_cols=93 Identities=8% Similarity=0.053 Sum_probs=69.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCC-HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDN-KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++++.|+++|++++++||.. ...+..+.+.+|+...-.. ..++....
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~-------------------------~~~~~~~k 122 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVH-------------------------REIYPGSK 122 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEE-------------------------EEESSSCH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcce-------------------------eEEEeCch
Confidence 578999999999999999999999999 6889999999998532100 00001111
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+.-..+++.++...+.+++|||+.+|+.+.+.||+...
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 123 ITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 222244556666666789999999999999999998744
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.75 E-value=8.5e-05 Score=73.18 Aligned_cols=125 Identities=19% Similarity=0.188 Sum_probs=85.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++.|+++.++|+.+...+....+.+|+...-. ..+..++. -.....|+
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd----~~~~~~~~----------------~~~KP~p~ 144 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFD----VMVFGDQV----------------KNGKPDPE 144 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----EEECGGGS----------------SSCTTSTH
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccc----cccccccc----------------CCCcccHH
Confidence 46899999999999999999999999999999999999854211 11111110 00123345
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce----EEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG----VAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg----iamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
-=..+++.++-..+.+++|||+.+|+.+-+.||+. +.-|.+..+..+++.+.++.+ ...+++.++
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l~ 213 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVLK 213 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHHH
Confidence 45667888888888999999999999999999985 333433344445544433333 445565553
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.72 E-value=7.3e-05 Score=72.16 Aligned_cols=136 Identities=12% Similarity=0.095 Sum_probs=91.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCH---hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNK---NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
++.|++.++++.|+++|++++++|+... ..+..+.+.+|+...-.. ++...+. . ...-...
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~----i~~~~~~---------~---~~~~~~K 97 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDF----IYASNSE---------L---QPGKMEK 97 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEE----EEECCTT---------S---STTCCCT
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEE----EEEcccc---------c---cccCCCC
Confidence 5789999999999999999999998876 788889999998532110 0000000 0 0000011
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCceEEeCCCccH-----HHH-hhcCEEeccCCccHHHHHHHHh
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGVAMGIAGTE-----VAK-EASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgiamg~~~~~-----~ak-~~ad~vl~~~~~~~i~~~i~~g 781 (817)
..|+--..+++.++...+.+++|||+ .+|+.+-+.||+....=..+.. ... ..+|+++...++..+..+++..
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 23344456777777777899999999 7999999999998543212221 111 2678998866788888887654
Q ss_pred HH
Q 003468 782 RS 783 (817)
Q Consensus 782 R~ 783 (817)
+.
T Consensus 178 ~~ 179 (189)
T 3ib6_A 178 KK 179 (189)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=1.6e-05 Score=81.41 Aligned_cols=59 Identities=12% Similarity=0.245 Sum_probs=48.5
Q ss_pred ccHHHHHHHH-hcCCCEEEEEcC----CccCHHHhhhCC-ceEEeCCCccHHHHhhcCEEeccCCc
Q 003468 712 RHKQEIVRLL-KEDGEVVAMTGD----GVNDAPALKLAD-IGVAMGIAGTEVAKEASDMVLADDNF 771 (817)
Q Consensus 712 ~~K~~iv~~l-~~~~~~v~~~GD----g~ND~~~l~~A~-vgiamg~~~~~~ak~~ad~vl~~~~~ 771 (817)
..|..-++.+ +...+.|++||| +.||++||+.|+ +|++|| |+.+.+|+.||+++.+++.
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC--
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCcC
Confidence 4677777766 334678999999 999999999999 599999 7888899999999887654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.65 E-value=3.7e-05 Score=74.71 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=76.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.| +++++|+........+.+.+|+...-. ..+...+. . .....|
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~----~~~~~~~~----------~------~~Kp~~ 144 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLL----AFFTSSAL----------G------VMKPNP 144 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCS----CEEEHHHH----------S------CCTTCH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcc----eEEeeccc----------C------CCCCCH
Confidence 36799999999999999 999999999999899989998753211 11111110 0 011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTE 756 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~ 756 (817)
+--..+++.++...+.+++|||+.||+.|.+.||+.+++-+.+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 145 AMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence 444567777777778899999999999999999999887644443
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.64 E-value=3.6e-05 Score=75.55 Aligned_cols=104 Identities=9% Similarity=0.025 Sum_probs=73.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH------hCCCCCCccccccccChhHHHHHHHHhHhhccCCceE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE------IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLL 705 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 705 (817)
++.|++.++++.|++ |++++++|+.....+..+.+. .|+...- ...+..++. .
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f----~~~~~~~~~----------~------ 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF----DKVYASCQM----------G------ 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS----SEEEEHHHH----------T------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc----CeEEeeccc----------C------
Confidence 357999999999999 999999999988877777666 5653211 111111110 0
Q ss_pred EEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccH
Q 003468 706 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTE 756 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~ 756 (817)
.....|+--..+++.++...+.+++|||+.||+.|.+.||++++|.+.+.+
T Consensus 148 ~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~ 198 (211)
T 2i6x_A 148 KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGEN 198 (211)
T ss_dssp CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHH
Confidence 011234444567777877788999999999999999999999999865543
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.60 E-value=2.3e-05 Score=77.63 Aligned_cols=108 Identities=22% Similarity=0.146 Sum_probs=67.9
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCH---------------hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHh
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNK---------------NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQK 695 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 695 (817)
.++.|++.++++.|+++|++++++|+... ..+..+.+.+|+.-. .+........ -.+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~--~~~~~~~~~~--g~~---- 126 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD--MVLACAYHEA--GVG---- 126 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS--EEEEECCCTT--CCS----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee--eEEEeecCCC--Cce----
Confidence 46789999999999999999999999987 567777888886310 0000000000 000
Q ss_pred HhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 696 NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 696 ~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
.............|.--..+++.++...+.++||||+.||+.|.+.|++..
T Consensus 127 --~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 127 --PLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp --TTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred --eecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 000000000011223334566667666788999999999999999999764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00011 Score=73.01 Aligned_cols=119 Identities=16% Similarity=0.224 Sum_probs=79.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++. +++.++|+.... .+.+|+...- ...+..++. . .....|
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f----~~~~~~~~~----------~------~~kp~~ 158 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF----AFALCAEDL----------G------IGKPDP 158 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC----SEEEEHHHH----------T------CCTTSH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe----eeeEEcccc----------C------CCCcCH
Confidence 3578899999999998 999999987654 2344543210 111111110 0 001234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceEEe---CCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGVAM---GIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiam---g~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+--..+++.++...+.+++|||+. ||+.|.+.||+++++ |....+. +..+|+++.+ +..+...++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~--l~el~~~l~ 227 (230)
T 3vay_A 159 APFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHN--LSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESS--GGGHHHHHH
T ss_pred HHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECC--HHHHHHHHH
Confidence 444667777877788999999998 999999999999887 2222223 6678999865 777777663
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.43 E-value=3.4e-05 Score=78.09 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=43.1
Q ss_pred ccHHHHHHHH-hcCCCEEEEEcC----CccCHHHhhhCCc-eEEeCCCccHHHHhhcCEEe
Q 003468 712 RHKQEIVRLL-KEDGEVVAMTGD----GVNDAPALKLADI-GVAMGIAGTEVAKEASDMVL 766 (817)
Q Consensus 712 ~~K~~iv~~l-~~~~~~v~~~GD----g~ND~~~l~~A~v-giamg~~~~~~ak~~ad~vl 766 (817)
.+|..-++.+ +...+.|++||| |.||.+||+.|+. |++|| ++.+.+|+.||+|.
T Consensus 187 ~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 187 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLFS 246 (246)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHCC
T ss_pred CchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhcC
Confidence 4676666655 334689999999 9999999999998 99999 78888899999873
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00037 Score=70.94 Aligned_cols=124 Identities=14% Similarity=0.166 Sum_probs=85.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++ ++++.++|+.....+..+.+.+|+...-. .++.+++. -.....|
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~----~i~~~~~~----------------~~~KP~p 179 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD----AIVIGGEQ----------------KEEKPAP 179 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS----EEEEGGGS----------------SSCTTCH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhh----eEEecCCC----------------CCCCCCH
Confidence 577999999999998 59999999999998888899999853211 11111000 0011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCc--eEEeCCCccH--HHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADI--GVAMGIAGTE--VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~v--giamg~~~~~--~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++...+.+++|||+ .||+.+-+.||+ .|.++..+.. .....+|+++.+ +..+...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~--~~el~~~l 249 (260)
T 2gfh_A 180 SIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALL 249 (260)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHH
T ss_pred HHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECC--HHHHHHHH
Confidence 44456677777777899999995 999999999999 5777632221 123468888764 67776655
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00018 Score=64.91 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=70.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|++++++|+.....+..+.+.+|+...-. ..+...+. . .....|
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~i~~~~~~----------~------~~Kp~~ 77 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVD----KVLLSGEL----------G------VEKPEE 77 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSS----EEEEHHHH----------S------CCTTSH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhcc----EEEEeccC----------C------CCCCCH
Confidence 467899999999999999999999999888888888888743211 11111100 0 011233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
+--..+++.++...+.++++||+.+|+.+.+.|++....-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~ 117 (137)
T 2pr7_A 78 AAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYY 117 (137)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEe
Confidence 4445566666666678999999999999999999864433
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00039 Score=71.20 Aligned_cols=42 Identities=19% Similarity=0.112 Sum_probs=37.5
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEEC---CCCHhhHHHHHHHhCCC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVIT---GDNKNTAEAICREIGVF 672 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~T---Gd~~~~a~~ia~~~gi~ 672 (817)
.++.+++.+++++++++|++++++| |+.........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5567889999999999999999999 88888888888888875
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.35 E-value=6e-05 Score=73.51 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=69.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH-hCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE-IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++++.|++.|++++++|+........+.+. +|+... ....+...+. . .....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~----f~~~~~~~~~----------~------~~Kp~ 150 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA----ADHIYLSQDL----------G------MRKPE 150 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH----CSEEEEHHHH----------T------CCTTC
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh----eeeEEEeccc----------C------CCCCC
Confidence 4679999999999999999999999765543332222 222100 0001111100 0 01123
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV 757 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ 757 (817)
|+--..+++.++...+.+++|||+.||+.|.+.||+..++.+.+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~ 197 (206)
T 2b0c_A 151 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTI 197 (206)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence 34456677778777789999999999999999999998887555544
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00023 Score=72.62 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=36.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEEC---CCCHhhHHHHHHHhCCCC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVIT---GDNKNTAEAICREIGVFG 673 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~T---Gd~~~~a~~ia~~~gi~~ 673 (817)
++ ++++++|++++++|++++++| |+.........+++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 35 899999999999999999999 788888888888888853
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00086 Score=71.77 Aligned_cols=137 Identities=18% Similarity=0.251 Sum_probs=86.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+...-.. ..++++++...-.+...... -.....|
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~--~~Ivs~ddv~~~~~~~~~~k-----p~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA--DFIATASDVLEAENMYPQAR-----PLGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCG--GGEECHHHHHHHHHHSTTSC-----CCCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCC--CEEEeccccccccccccccc-----CCCCCCH
Confidence 5789999999999999999999999999999999999998532110 03444444321110000000 0011223
Q ss_pred ccHHHHHHHHh--------------cCCCEEEEEcCCccCHHHhhhCCce-EEeCCCcc-------HHHHhhcCEEeccC
Q 003468 712 RHKQEIVRLLK--------------EDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGT-------EVAKEASDMVLADD 769 (817)
Q Consensus 712 ~~K~~iv~~l~--------------~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~-------~~ak~~ad~vl~~~ 769 (817)
+--...++.++ ...+.+++|||+.+|+.+-++||+. |++. .+. +.....||+++.+
T Consensus 288 ~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~s- 365 (384)
T 1qyi_A 288 FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVINH- 365 (384)
T ss_dssp HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEESS-
T ss_pred HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEECC-
Confidence 32233333333 3457899999999999999999986 3333 221 2223468999865
Q ss_pred CccHHHHHH
Q 003468 770 NFGTIVAAV 778 (817)
Q Consensus 770 ~~~~i~~~i 778 (817)
+..+...+
T Consensus 366 -l~eL~~~l 373 (384)
T 1qyi_A 366 -LGELRGVL 373 (384)
T ss_dssp -GGGHHHHH
T ss_pred -HHHHHHHH
Confidence 77777665
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0012 Score=63.92 Aligned_cols=95 Identities=8% Similarity=0.002 Sum_probs=61.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++||.....+..++. ... + .++.+ ...-..+..|
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~-d-----~v~~~----------------~~~~~~KP~p 90 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVN-D-----WMIAA----------------PRPTAGWPQP 90 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTT-T-----TCEEC----------------CCCSSCTTST
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccC-C-----EEEEC----------------CcCCCCCCCh
Confidence 567999999999999999999999998877744433 110 0 00000 0000011223
Q ss_pred ccHHHHHHHHhcCC-CEEEEEcCCccCHHHhhhCCce-EEeC
Q 003468 712 RHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLADIG-VAMG 751 (817)
Q Consensus 712 ~~K~~iv~~l~~~~-~~v~~~GDg~ND~~~l~~A~vg-iamg 751 (817)
+--...++.+.... +.++||||..+|+.+-+.|++- |++.
T Consensus 91 ~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 91 DACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 33344555665543 6799999999999999999973 4443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00014 Score=72.39 Aligned_cols=105 Identities=11% Similarity=0.074 Sum_probs=73.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH------hCCCCCCccccccccChhHHHHHHHHhHhhccCCceE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE------IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLL 705 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 705 (817)
++.|++.++++.|++. +++.++|+.....+..+.+. .|+... +...+...+. -
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~----fd~i~~~~~~----------------~ 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY----FEKTYLSYEM----------------K 170 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH----CSEEEEHHHH----------------T
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh----CCEEEeeccc----------------C
Confidence 3569999999999999 99999999998888766644 343210 0011111110 0
Q ss_pred EEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH
Q 003468 706 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV 757 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ 757 (817)
.....|+--..+++.++...+.+++|||+.||+.|.+.||+++++.+.+.+.
T Consensus 171 ~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~ 222 (229)
T 4dcc_A 171 MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDW 222 (229)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCG
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHH
Confidence 0122345556778888878889999999999999999999999998655443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0018 Score=65.83 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=35.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEEC---CCCHhhHHHHHHHhCCC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVIT---GDNKNTAEAICREIGVF 672 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~T---Gd~~~~a~~ia~~~gi~ 672 (817)
+.+.+.++++.+++.|+++.++| |+.........+.+|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55778899999999999999999 99998888888888874
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00066 Score=68.00 Aligned_cols=54 Identities=13% Similarity=0.160 Sum_probs=39.0
Q ss_pred HHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCceE---EeCCCccHHHH---hhcCEEecc
Q 003468 715 QEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGV---AMGIAGTEVAK---EASDMVLAD 768 (817)
Q Consensus 715 ~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgi---amg~~~~~~ak---~~ad~vl~~ 768 (817)
..+.+.++...+.+++|||+ .||++|++.||+++ ++|+...+..+ ..+|+++.+
T Consensus 183 ~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred HHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 34455566667889999999 79999999999984 45643334333 468998864
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00095 Score=67.38 Aligned_cols=116 Identities=11% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...- ..++++++. -.....|
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F----d~i~~~~~~----------------~~~KP~p 173 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF----DFIADAGKC----------------KNNKPHP 173 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC----SEECCGGGC----------------CSCTTSS
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc----ceeeccccc----------------CCCCCcH
Confidence 467899999999999999999887654 456678888985421 111221111 0112345
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEeCCCccHHHHhhcCEEeccCCccHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAMGIAGTEVAKEASDMVLADDNFGTI 774 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg~~~~~~ak~~ad~vl~~~~~~~i 774 (817)
+--..+++.++-..+.+++|||+.+|+.+-+.||+ .|+++ +..+. ..||+++.+ +..+
T Consensus 174 ~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~~--~~ad~vi~~--l~eL 232 (250)
T 4gib_A 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYENL--KKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTTT--TTSSEEESS--GGGC
T ss_pred HHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhHh--ccCCEEECC--hHhC
Confidence 55567788888888899999999999999999998 46666 33322 358999865 5444
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.001 Score=66.58 Aligned_cols=84 Identities=13% Similarity=0.205 Sum_probs=64.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHh----hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKN----TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF 706 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 706 (817)
.++.|++.++++.|+++|++++++||+... .+..-.+.+|+.... ...++
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--------------------------~~~Li 153 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--------------------------DKTLL 153 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--------------------------TTTEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc--------------------------cceeE
Confidence 567899999999999999999999999764 667778889996421 11234
Q ss_pred EecCcccHHHHHHHHhcC-CCEEEEEcCCccCHHH
Q 003468 707 SRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPA 740 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~ 740 (817)
.|.....|....+.+... -..|+++||..+|.++
T Consensus 154 lr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 154 LKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 444456787777777774 4678899999999987
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00077 Score=63.99 Aligned_cols=92 Identities=16% Similarity=0.151 Sum_probs=63.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCC---------------CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGD---------------NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKN 696 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (817)
++.|++.++++.|+++|++++++|+. ....+..+.+.+|+.-
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----------------------- 98 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF----------------------- 98 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE-----------------------
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe-----------------------
Confidence 47899999999999999999999997 4556677788888741
Q ss_pred hhccCCceEEE-----------ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeC
Q 003468 697 YLRQDGGLLFS-----------RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMG 751 (817)
Q Consensus 697 ~~~~~~~~v~~-----------r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg 751 (817)
...+++ ...|+-=..+++.+....+.+++|||+.+|+.+-+.|++. |.+.
T Consensus 99 -----d~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 99 -----DEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp -----EEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred -----eEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 011111 0122222334455555667899999999999999999997 4444
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0013 Score=65.83 Aligned_cols=85 Identities=12% Similarity=0.166 Sum_probs=63.8
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCH----hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceE
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNK----NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLL 705 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 705 (817)
..++.|++.+.++.|+++|++++++||+.. ..+..-.+.+|+.... ...+
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~--------------------------~~~L 152 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE--------------------------ESAF 152 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS--------------------------GGGE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc--------------------------ccce
Confidence 356789999999999999999999999965 4666777889996421 0123
Q ss_pred EEecCcccHHHHHHHHhcC-CCEEEEEcCCccCHHH
Q 003468 706 FSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPA 740 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~ 740 (817)
+.|.....|....+.+... -..|+++||..+|.++
T Consensus 153 ilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 153 YLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred eccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 4444445677777777666 4578899999999986
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.005 Score=64.12 Aligned_cols=42 Identities=10% Similarity=0.118 Sum_probs=34.6
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEEC---CCCHhhHHHHHHHhCCC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVIT---GDNKNTAEAICREIGVF 672 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~T---Gd~~~~a~~ia~~~gi~ 672 (817)
+++-+++.+++++|+++|++++++| |+.........+.+|+.
T Consensus 36 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 36 ERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4566789999999999999999999 57777776677778775
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.019 Score=57.78 Aligned_cols=43 Identities=14% Similarity=0.200 Sum_probs=31.3
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEEC---CCCHhhHHHHHHHhCCC
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVIT---GDNKNTAEAICREIGVF 672 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~T---Gd~~~~a~~ia~~~gi~ 672 (817)
.++.-+++.++++.+++.|++++++| |..........+.+|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45555788899999999999999999 55555555555666764
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0088 Score=62.06 Aligned_cols=97 Identities=16% Similarity=0.077 Sum_probs=67.1
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhH---HHHHHH--------hCCCCCCccccccccChhHHHHHHHHhHh
Q 003468 629 LRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTA---EAICRE--------IGVFGAHEDISSQSITGKEFMDIHNQKNY 697 (817)
Q Consensus 629 ~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (817)
.++++.|++.++++.|+++|+++.++||.....+ ....+. .|+. .. .+ +.+.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~-~~-~~----~~~~----------- 247 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-LV-MQ----CQRE----------- 247 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-CS-EE----EECC-----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC-ch-he----eecc-----------
Confidence 4677899999999999999999999999986533 344444 6772 11 00 0000
Q ss_pred hccCCceEEEecCcccHHHHHHHHhcCCC-EEEEEcCCccCHHHhhhCCceE
Q 003468 698 LRQDGGLLFSRAEPRHKQEIVRLLKEDGE-VVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 698 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~-~v~~~GDg~ND~~~l~~A~vgi 748 (817)
.. ..+..|+-+..+++.+..... .++||||..+|+.|-+.||+-.
T Consensus 248 ----~~--~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 248 ----QG--DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp ----TT--CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ----CC--CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 00 012346667777777755543 4689999999999999999864
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0034 Score=61.71 Aligned_cols=94 Identities=10% Similarity=0.093 Sum_probs=63.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|+++|++++++|+... .+..+.+.+|+...- ..++..++. -.....|+
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f----~~~~~~~~~----------------~~~Kp~~~ 154 (220)
T 2zg6_A 96 LYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF----DALALSYEI----------------KAVKPNPK 154 (220)
T ss_dssp ECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC----SEEC---------------------------CC
T ss_pred ECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe----eEEEecccc----------------CCCCCCHH
Confidence 569999999999999999999999866 477888888885321 111111110 01223344
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCcc-CHHHhhhCCceEEe
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVN-DAPALKLADIGVAM 750 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~N-D~~~l~~A~vgiam 750 (817)
--..+++.++... ++|||+.+ |+.+.+.||+....
T Consensus 155 ~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEE
Confidence 4455666665543 99999999 99999999998553
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.007 Score=60.01 Aligned_cols=116 Identities=10% Similarity=0.088 Sum_probs=74.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE-ecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS-RAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-r~~ 710 (817)
++.|++.++++.|++.| ++.++|+.....+....+.+|+... + ...+.. ...
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~-----------------------f---~~~~~~~~~K 148 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE-----------------------V---EGRVLIYIHK 148 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH-----------------------T---TTCEEEESSG
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh-----------------------c---CeeEEecCCh
Confidence 57899999999999999 9999999999888988898887421 0 011111 111
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCcc---CHHHhhhCCce-EEeCCC----ccHHHHhh--cCEEeccCCccHHHHHH
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVN---DAPALKLADIG-VAMGIA----GTEVAKEA--SDMVLADDNFGTIVAAV 778 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~N---D~~~l~~A~vg-iamg~~----~~~~ak~~--ad~vl~~~~~~~i~~~i 778 (817)
|.--..+.+ +...+.+++|||+.+ |+.+-+.||+. |.+... ..+..++. +|+++.+ +..+...+
T Consensus 149 ~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~--~~el~~~l 222 (231)
T 2p11_A 149 ELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVER--IGDLVEMD 222 (231)
T ss_dssp GGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESS--GGGGGGCG
T ss_pred HHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecC--HHHHHHHH
Confidence 222222222 345678999999999 66666778864 333311 12233443 8988854 55554443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0055 Score=61.85 Aligned_cols=42 Identities=10% Similarity=0.128 Sum_probs=34.4
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHh---hHHHHHHHhCCC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKN---TAEAICREIGVF 672 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~---~a~~ia~~~gi~ 672 (817)
.++.|++.++|+.|+++|++++++||+... .+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 356799999999999999999999999844 444555777885
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0088 Score=62.45 Aligned_cols=120 Identities=14% Similarity=0.067 Sum_probs=70.4
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh----CCCCCCcccccccc--C-h---h---HHHHHHHHh-
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI----GVFGAHEDISSQSI--T-G---K---EFMDIHNQK- 695 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~----gi~~~~~~~~~~~~--~-~---~---~~~~~~~~~- 695 (817)
...+.|++++.++.++++|++|+++||-....++.+|..+ ||... .+....+ . + . ......+..
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e--~ViG~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE--NVIGVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG--GEEEECEEEECTTTCCEECHHHHHHTTCC
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH--HeEeeeeeeeccccccccccccccccccc
Confidence 3357899999999999999999999999999999999985 55332 1111100 0 0 0 000000000
Q ss_pred HhhccCCceEEEe-----cCcccHHHHHHHHhcC-CCEEEEEcCC-ccCHHHhhh--CCceEEeC
Q 003468 696 NYLRQDGGLLFSR-----AEPRHKQEIVRLLKED-GEVVAMTGDG-VNDAPALKL--ADIGVAMG 751 (817)
Q Consensus 696 ~~~~~~~~~v~~r-----~~p~~K~~iv~~l~~~-~~~v~~~GDg-~ND~~~l~~--A~vgiamg 751 (817)
......+..+-.+ +.-+.|...++..-.. ...++++||+ ..|.+||+. ++.|+++-
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~ 283 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLW 283 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEE
Confidence 0000001111111 1235677777665433 3568999999 579999965 55555554
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.017 Score=58.47 Aligned_cols=115 Identities=11% Similarity=0.152 Sum_probs=77.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh---CCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI---GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
++.|++.++++.|+++|+++.++|..+...+..+.+.+ |+...- ..++.. + .- ..
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f----d~i~~~-~----------------~~-~K 187 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV----DGHFDT-K----------------IG-HK 187 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC----SEEECG-G----------------GC-CT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc----cEEEec-C----------------CC-CC
Confidence 57899999999999999999999999988777776644 353211 111111 0 00 12
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCcc---HHHHhhcCEEecc
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGT---EVAKEASDMVLAD 768 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~---~~ak~~ad~vl~~ 768 (817)
..|+-=..+++.++-..+.+++|||..+|+.+-+.||+- |.+...+. +.....+|+++.+
T Consensus 188 P~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 188 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred CCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 234444567777877788999999999999999999986 33432121 2223457777654
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0048 Score=62.62 Aligned_cols=42 Identities=10% Similarity=0.315 Sum_probs=34.5
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH----hCCC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE----IGVF 672 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~----~gi~ 672 (817)
++.-+++.++++.+++.|+++.++||+...+...+++. +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 44457899999999999999999999988777766654 7774
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.013 Score=58.69 Aligned_cols=110 Identities=15% Similarity=0.159 Sum_probs=75.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+.++.|+++|+++.++|.... +..+.+.+|+.... ..++.+++. -.....|
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f----d~i~~~~~~----------------~~~KP~p 152 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF----TFCADASQL----------------KNSKPDP 152 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC----SEECCGGGC----------------SSCTTST
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc----ccccccccc----------------cCCCCcH
Confidence 4578999999999999999999998653 45667888885321 111111110 0012345
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCccHHHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~~~ak~~ad~vl~~ 768 (817)
+-=...++.++-..+.+++|||+.+|+.+-+.||+- |+++ .|. ..||.++.+
T Consensus 153 ~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 153 EIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLPS 205 (243)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEESS
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcCC
Confidence 555677888888889999999999999999999975 5555 332 236666554
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.5 Score=44.55 Aligned_cols=16 Identities=6% Similarity=0.034 Sum_probs=14.3
Q ss_pred cccccCccEEEEEEEe
Q 003468 386 GTLTTNQMAVTKLVAV 401 (817)
Q Consensus 386 GTLT~~~m~v~~~~~~ 401 (817)
||||+|+|.|..+...
T Consensus 1 GTLT~G~p~V~~v~~~ 16 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVL 16 (185)
T ss_dssp CCCCSCCCEEEEEEEC
T ss_pred CCCcCCcEEEEEEEec
Confidence 8999999999998754
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=94.33 E-value=0.028 Score=54.82 Aligned_cols=87 Identities=18% Similarity=0.260 Sum_probs=57.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH----hCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE--
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE----IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF-- 706 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-- 706 (817)
+.+++.++++.|+++|+++.++|+.....+..+.+. .+...... ....+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~-------------------------~~~~~~~ 143 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM-------------------------NPVIFAG 143 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB-------------------------CCCEECC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcccccc-------------------------chhhhcC
Confidence 467999999999999999999999976543333322 22210000 00011
Q ss_pred EecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 707 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
....|+-...+++.++- ++++||..+|+.+-+.||+-.
T Consensus 144 ~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 144 DKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp CCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeE
Confidence 12345555555555543 999999999999999999863
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=93.75 E-value=0.047 Score=61.47 Aligned_cols=100 Identities=11% Similarity=0.061 Sum_probs=65.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCC---CHhhHHHHHHH-hCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGD---NKNTAEAICRE-IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd---~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
++.|++.++++.|+++|+++.++|+. .......+... .|+... +..++.++++. ..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~----fd~i~~~~~~~----------------~~ 159 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH----FDFLIESCQVG----------------MV 159 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT----SSEEEEHHHHT----------------CC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhh----eeEEEeccccC----------------CC
Confidence 57899999999999999999999986 11111111111 133211 01112221110 01
Q ss_pred ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 708 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
...|+--..+++.++-..+.+++|||+.||+.+.+.||+....-
T Consensus 160 KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 160 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 23344556677888878889999999999999999999987665
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=92.60 E-value=0.076 Score=57.65 Aligned_cols=94 Identities=15% Similarity=0.131 Sum_probs=60.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCC------------HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDN------------KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQ 700 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (817)
+-|++.++++.|+++|++++++|+.. ...+..+.+.+|+.-. . .+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd--~----i~~~--------------- 146 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQ--V----LVAT--------------- 146 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCE--E----EEEC---------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEE--E----EEEC---------------
Confidence 57999999999999999999999965 1226677788887310 0 0000
Q ss_pred CCceEEEecCcccHHHHHHHHh----cCCCEEEEEcCCc-----------------cCHHHhhhCCceE
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLK----EDGEVVAMTGDGV-----------------NDAPALKLADIGV 748 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~----~~~~~v~~~GDg~-----------------ND~~~l~~A~vgi 748 (817)
....+....|+-=..+++.++ -..+.++||||.. +|+.+-+.|++-.
T Consensus 147 -~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f 214 (416)
T 3zvl_A 147 -HAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 214 (416)
T ss_dssp -SSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCE
T ss_pred -CCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcc
Confidence 000000122333344555554 4457899999997 6888888888775
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=92.35 E-value=0.0071 Score=58.13 Aligned_cols=80 Identities=13% Similarity=0.134 Sum_probs=58.5
Q ss_pred CCcHHHHHHHHHHHHc-CCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAA-GIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++++.|+++ |+++.++|+.....+..+.+.+|+. + ..+ +
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~glf--~-----~i~--------------------------~ 119 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWV--E-----QHL--------------------------G 119 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHHH--H-----HHH--------------------------C
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCch--h-----hhc--------------------------C
Confidence 5789999999999999 9999999999888777777777761 0 000 0
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccC----HHHhh-hCCceE
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVND----APALK-LADIGV 748 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND----~~~l~-~A~vgi 748 (817)
+ ..++.++...+.++++||+.+| +.+-+ .|++-.
T Consensus 120 ~----~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~ 158 (193)
T 2i7d_A 120 P----QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEH 158 (193)
T ss_dssp H----HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEE
T ss_pred H----HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccce
Confidence 1 1344455556788999999998 66666 666653
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=91.11 E-value=0.15 Score=45.69 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=33.4
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCC---HhhHHHHHHHhCCC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDN---KNTAEAICREIGVF 672 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~---~~~a~~ia~~~gi~ 672 (817)
+.|++.++|++++++|++++++||++ ...+...+++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45689999999999999999999998 45566667777774
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=90.98 E-value=0.2 Score=50.25 Aligned_cols=92 Identities=12% Similarity=0.082 Sum_probs=64.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh--C---------CCCCCccccccccChhHHHHHHHHhHhhcc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI--G---------VFGAHEDISSQSITGKEFMDIHNQKNYLRQ 700 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (817)
++.|++.++++. |+++.++|..+...+..+.+.. | +... ....++. . +.
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~----~~~~f~~-~----------~~- 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY----IDGYFDI-N----------TS- 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG----CCEEECH-H----------HH-
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh----cceEEee-e----------cc-
Confidence 568999999888 9999999999998888777766 4 2110 0000110 0 00
Q ss_pred CCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
.....|+-=..+++.++-..+.+++|||+.+|+.+-+.||+-.
T Consensus 185 -----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 185 -----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp -----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred -----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 0123455556677888877889999999999999999999864
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=90.27 E-value=0.055 Score=55.85 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=27.2
Q ss_pred Hhhcccccccccccccc---------CCeeEEecCCCcccccCcc
Q 003468 358 MAQKNALVRKLPSVETL---------GCTTVICSDKTGTLTTNQM 393 (817)
Q Consensus 358 l~k~~ilvk~~~~le~l---------g~v~~I~~DKTGTLT~~~m 393 (817)
+.|.++++|++..+|.+ .++. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 47889999999998873 2333 57799999998643
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.96 E-value=0.1 Score=49.89 Aligned_cols=90 Identities=10% Similarity=0.084 Sum_probs=63.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
.+||++.+.++.|++. ++++++|.-....|..+.+.+++... +...+.+++ ..
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~----f~~~l~rd~----------------------~~ 120 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV----FRARLFRES----------------------CV 120 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC----EEEEECGGG----------------------CE
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc----EEEEEEccc----------------------ce
Confidence 4699999999999998 99999999999999999999998531 111111111 11
Q ss_pred ccHHHH---HHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEI---VRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~i---v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
..|... ++.+....+.|++|+|..++..+=..|++-|
T Consensus 121 ~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 121 FHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp EETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred ecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 112112 2233445578999999999998877776665
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=86.21 E-value=0.14 Score=48.40 Aligned_cols=90 Identities=12% Similarity=0.093 Sum_probs=63.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
.+||++.+.++.|.+. +++++.|.-....|..+.+.++.... +...+.+++ ..
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~----f~~~~~rd~----------------------~~ 107 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGA----FRARLFRES----------------------CV 107 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCC----EEEEECGGG----------------------SE
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCc----EEEEEeccC----------------------ce
Confidence 4799999999999998 99999999999999999999998531 111111111 01
Q ss_pred ccHHHH---HHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEI---VRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~i---v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
..|... ++.+....+.|++|||..++..+=..+++-|
T Consensus 108 ~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 108 FHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred ecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 111111 2233445578999999999998777776665
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=85.76 E-value=0.039 Score=53.01 Aligned_cols=40 Identities=13% Similarity=0.079 Sum_probs=34.5
Q ss_pred CCcHHHHHHHHHHHHc-CCeEEEECCCCHhhHHHHHHHhCC
Q 003468 632 PPREEVRQAIEDCKAA-GIRVMVITGDNKNTAEAICREIGV 671 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi 671 (817)
++.|++.++++.|++. |+++.++|+.....+....+.+|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5689999999999999 999999999988776666666665
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=84.96 E-value=0.78 Score=45.98 Aligned_cols=122 Identities=16% Similarity=0.196 Sum_probs=65.1
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccCh-hHHHHHHHHhHhhccCCceEEEec
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITG-KEFMDIHNQKNYLRQDGGLLFSRA 709 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~r~ 709 (817)
..+.+++.++++.|+ +|+++ ++|......... -+ .+.+ ..+... ...+...........
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~----~~-----------~l~~~~~l~~~---~~~~~~~~~~~~~KP 188 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGE----EG-----------IYPGAGSIIAA---LKVATNVEPIIIGKP 188 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEET----TE-----------EEECHHHHHHH---HHHHHCCCCEECSTT
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCC----CC-----------CcCCcHHHHHH---HHHHhCCCccEecCC
Confidence 356789999999999 89988 788665432100 00 0000 001111 001111111111122
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce-EEeC--CCccHHHHh---hcCEEeccCCccHHHH
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG-VAMG--IAGTEVAKE---ASDMVLADDNFGTIVA 776 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg-iamg--~~~~~~ak~---~ad~vl~~~~~~~i~~ 776 (817)
.|+--..+.+. ...+.++||||+. +|+.+-+.||+. |.+. ....+.... .+|+++.+ +..+..
T Consensus 189 ~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~--l~el~~ 258 (263)
T 1zjj_A 189 NEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPS--VYELID 258 (263)
T ss_dssp SHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESS--GGGGGG
T ss_pred CHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECC--HHHHHH
Confidence 23322333444 5578999999995 999999999986 4453 111222222 57888765 555543
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=83.84 E-value=16 Score=44.41 Aligned_cols=141 Identities=9% Similarity=0.058 Sum_probs=71.8
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCC
Q 003468 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEG 105 (817)
Q Consensus 26 ~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 105 (817)
..+++.+|+.+++.....+-|+..+- .+....+++.|+.-|.-.+ ++..+++++...+....+...
T Consensus 70 ~~GLs~~ea~~rl~~~G~N~l~~~~~-------------~~~~~~~~~q~~~~~~~il-~~aa~~~~~~~~~~~~~~~~~ 135 (1034)
T 3ixz_A 70 TKGLSASLAAELLLRDGPNALRPPRG-------------TPEYVKFARQLAGGLQCLM-WVAAAICLIAFAIQASEGDLT 135 (1034)
T ss_pred ccCCCHHHHHHHHHhhCCCCCCCCCC-------------CCHHHHHHHHHhChHHHHH-HHHHHHHHHHHHHhhccCCCc
Confidence 46889999999998766665643221 1222334444544443333 233333333222211110000
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh----c-ccc-eEE----ecCCccceeeecCCccCCcEE
Q 003468 106 GEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEI----Q-SEQ-ATV----TRDGKKIPSLSAKELVPGDIV 175 (817)
Q Consensus 106 ~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~----~-~~~-~~V----~r~g~~~~~i~~~dLv~GDII 175 (817)
....+...+..++++++..+..+..-+...++-++++++... . ..+ ..| +.-|.. ..+...|.+|-|.+
T Consensus 136 ~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDi-V~l~~Gd~VPAD~~ 214 (1034)
T 3ixz_A 136 TDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDL-VEMKGGDRVPADIR 214 (1034)
T ss_pred cccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcE-EEEcCCceecCCeE
Confidence 111122233334444444444456666777777777776432 1 111 222 234665 78999999999999
Q ss_pred EecCCC
Q 003468 176 ELKVGD 181 (817)
Q Consensus 176 ~l~~G~ 181 (817)
.++.++
T Consensus 215 ll~~~~ 220 (1034)
T 3ixz_A 215 ILQAQG 220 (1034)
T ss_pred EEEeCC
Confidence 998654
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=83.23 E-value=2.1 Score=39.80 Aligned_cols=101 Identities=7% Similarity=0.060 Sum_probs=58.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCC---Hhh---HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDN---KNT---AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLL 705 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~---~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 705 (817)
++.|++.++++.|++. +++.++|+.. ... ...+.+..+.... ...+
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~---------------------------~~~i 120 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP---------------------------QHFV 120 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCG---------------------------GGEE
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc---------------------------ccEE
Confidence 5789999999999985 9999999972 111 2223333443221 1122
Q ss_pred EEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 706 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
++... .+ + +.+++|||+.+|+. +.|+-.|++. .+... ...+++++.+ +..+...+
T Consensus 121 ~~~~~--~~------l----~~~l~ieDs~~~i~--~aaG~~i~~~-~~~~~-~~~~~~~i~~--~~el~~~l 175 (180)
T 3bwv_A 121 FCGRK--NI------I----LADYLIDDNPKQLE--IFEGKSIMFT-ASHNV-YEHRFERVSG--WRDVKNYF 175 (180)
T ss_dssp ECSCG--GG------B----CCSEEEESCHHHHH--HCSSEEEEEC-CGGGT-TCCSSEEECS--HHHHHHHH
T ss_pred EeCCc--Ce------e----cccEEecCCcchHH--HhCCCeEEeC-CCccc-CCCCceecCC--HHHHHHHH
Confidence 22111 11 1 45799999999985 5677566665 33221 1346666643 66665554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 817 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 8e-44 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-37 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-37 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-35 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-26 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-27 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-26 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-24 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-19 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 6e-10 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-09 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 7e-08 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.003 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 8e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 1e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 3e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-05 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 4e-05 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 7e-05 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 2e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 2e-04 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 153 bits (388), Expect = 8e-44
Identities = 91/167 (54%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
Query: 615 SSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA 674
S I S DPPR+EV +I+ C+ AGIRV++ITGDNK TA AICR IG+FG
Sbjct: 3 SVICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGE 62
Query: 675 HEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 734
+E+++ ++ TG+EF D+ + F+R EP HK +IV L+ E+ AMTGDG
Sbjct: 63 NEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDG 122
Query: 735 VNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEG 781
VNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF TIVAAV EG
Sbjct: 123 VNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 138 bits (347), Expect = 2e-37
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 28/252 (11%)
Query: 393 MAVTKLVAVGSRAG---TLRSFNVQGTTYNPSDGRI--EGWPV-GRMDANLQTIAKISAV 446
M+V K+ + G +L F++ G+TY P +G + P+ L +A I A+
Sbjct: 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAP-EGEVLKNDKPIRSGQFDGLVELATICAL 59
Query: 447 CNDAGVE--QSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTL 504
CND+ ++ ++ Y G TE AL +VEKM + S E C + L
Sbjct: 60 CNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFN-TEVRNLSKVERANACNSVIRQL 118
Query: 505 EQRFATLEFDRDRKSMGVLVNSSSGNK-----KLLVKGAVENLLERSSFVQLLDGSVVEL 559
++ TLEF RDRKSM V + + ++ K+ VKGA E +++R ++V++ + V +
Sbjct: 119 MKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPM 177
Query: 560 DQYSRDLILQSLQE--MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSI 617
++ IL ++E LRCL A +D +L + + +
Sbjct: 178 TGPVKEKILSVIKEWGTGRDTLRCLALATRDT----------PPKREEMVLDDSSRFMEY 227
Query: 618 ESRLVFVGMVGL 629
E+ L FVG+VG+
Sbjct: 228 ETDLTFVGVVGM 239
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 141 bits (356), Expect = 4e-37
Identities = 45/421 (10%), Positives = 97/421 (23%), Gaps = 97/421 (23%)
Query: 364 LVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDG 423
+ L LG + I + +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRI----------------------FQKD 63
Query: 424 RIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGV 483
+I + + I + + + A E +
Sbjct: 64 KILNKLKSLGLNSNWDMLFIVFSIHLIDILKK------LSHDEIEAFMYQDEPVELKL-- 115
Query: 484 NHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLL 543
Q +T L + + + + L + A
Sbjct: 116 ---------------QNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATT--- 157
Query: 544 ERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHP 603
+ + + + +L ++ + K Y+ E
Sbjct: 158 ------------ELHVSDATLFSLKGALWTLAQEVYQEWYLGSKL-------YEDVEKKI 198
Query: 604 AHQLLLNPTNYSSIESRLVFVGMVGLRDP--PREEVRQAIEDCKAAGIRVMVITGDNKNT 661
A G + P +EV+ + D K AG + + TG
Sbjct: 199 ARTT--------------FKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTE 244
Query: 662 AEAICREIGV---FGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLL----FSRAEPRHK 714
+G+ F A ++ + E M + + + +
Sbjct: 245 TVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYES 304
Query: 715 QEIVRLLKEDGEVVAMTGDGVNDAPALKLAD---IGVAMGIAGTEVAKE----ASDMVLA 767
+ + + V + GD + D + + IG G+ G + A E +D V+
Sbjct: 305 YINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN 364
Query: 768 D 768
Sbjct: 365 H 365
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 137 bits (345), Expect = 6e-35
Identities = 74/149 (49%), Positives = 95/149 (63%), Gaps = 3/149 (2%)
Query: 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVR 85
A +K EEC +GV+ GL+ +VK+ E YG+NEL EG S+++L++EQF D LVR
Sbjct: 4 AHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVR 63
Query: 86 ILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALK 145
ILL+AA +SFVLAW+ E GE ITAFVEP VI LILI NAIVG+WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 146 EIQSEQATVTRDGKKIPSLSAKELVPGDI 174
E + + + E + I
Sbjct: 121 EYEPAATEQDKTPLQQKLDEFGEQLSKVI 149
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 110 bits (276), Expect = 4e-26
Identities = 70/167 (41%), Positives = 95/167 (56%), Gaps = 9/167 (5%)
Query: 250 GMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEY 309
+ + A+ ++ TPL++KL++FGE L+ +I +IC VWLIN+ +F +
Sbjct: 110 RNAENAIEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH 169
Query: 310 VDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLP 369
W R YYF+IAVALAVAAIPEGLPAVITTCLALGTR+MA+KNA+VR LP
Sbjct: 170 GGSWIRGAI-------YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLP 222
Query: 370 SVETLGCTTVICSDK--TGTLTTNQMAVTKLVAVGSRAGTLRSFNVQ 414
SVETLG + +++N V + + VQ
Sbjct: 223 SVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQ 269
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 109 bits (272), Expect = 1e-27
Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 46/250 (18%)
Query: 393 MAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGV 452
M V + + T G + +++I+ +CN A
Sbjct: 2 MTVAHMWFDN------QIHEADTTEDQS------GATFDKRSPTWTALSRIAGLCNRAVF 49
Query: 453 EQSGNH-----YVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQR 507
+ + +G +E+AL +E V + +
Sbjct: 50 KAGQENISVSKRDTAGDASESALLKCIELSCG-------------SVRKMRDRN----PK 92
Query: 508 FATLEFDRDRKSMGVLVNSSSGNKKL--LVKGAVENLLERSSFVQLLDGSVVELDQYSRD 565
A + F+ K + + ++KGA E +L+R S + L+ G + LD+ +D
Sbjct: 93 VAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSI-LVQGKEIPLDKEMQD 151
Query: 566 LILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVG 625
+ E+ R LGF + + + +L FVG
Sbjct: 152 AFQNAYLELGGLGERVLGFCQLNL---------PSGKFPRGFKFDTDELNFPTEKLCFVG 202
Query: 626 MVGLRDPPRE 635
++ + D
Sbjct: 203 LMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 103 bits (258), Expect = 1e-26
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 33/158 (20%)
Query: 621 LVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISS 680
G D +E + A+++ K GI+V +ITGDN +AEAI RE+ + ++
Sbjct: 10 KTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL- 68
Query: 681 QSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 740
P K E V+ L+ EVVA GDG+NDAPA
Sbjct: 69 ------------------------------PHQKSEEVKKLQA-KEVVAFVGDGINDAPA 97
Query: 741 LKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778
L AD+G+A+G +G++VA E+ D+VL D+ +VAA+
Sbjct: 98 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 97.1 bits (241), Expect = 1e-24
Identities = 51/115 (44%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 150 EQATVTRDGKK-IPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGES 208
E V R +K + + A+++VPGDIVE+ VGDKVPAD+R+L + S+T+RV+Q LTGES
Sbjct: 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGES 60
Query: 209 EAVSKTVKTVPENSDIQGKKC-MVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQI 262
+V K + VP+ + K M+F+GT + G +V TG++TEIGK+ Q+
Sbjct: 61 VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 84.6 bits (208), Expect = 5e-19
Identities = 33/218 (15%), Positives = 63/218 (28%), Gaps = 11/218 (5%)
Query: 572 QEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRD 631
+ ++ L++ + S E FV
Sbjct: 18 NDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLE---DA 74
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDI 691
RE R+ + I VI+G + I + + +++ I
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK--DRIYCNHASFDNDYIHI 132
Query: 692 HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751
+ S K ++ L E + + M GD V D A KL+D+ A
Sbjct: 133 DWPHS-----CKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD 187
Query: 752 IAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMK 789
E +E + L +F I + + + ++
Sbjct: 188 YLLNE-CREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.6 bits (138), Expect = 6e-10
Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 13/142 (9%)
Query: 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFM 689
+R+ + + ++V +I+G ++ E + ++ + + + +
Sbjct: 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR--------L 131
Query: 690 DIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVNDAPALKLADIG 747
+ Y D AE K ++++LLKE + + M GDG D A AD
Sbjct: 132 KFYFNGEYAGFDET--QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAF 189
Query: 748 VAMG-IAGTEVAKEASDMVLAD 768
+ G + K+ + + D
Sbjct: 190 IGFGGNVIRQQVKDNAKWYITD 211
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 55.2 bits (132), Expect = 4e-09
Identities = 21/146 (14%), Positives = 38/146 (26%), Gaps = 5/146 (3%)
Query: 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQ 694
+E + D + + + G + R V + ++
Sbjct: 52 DEHGLKLGDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLL 111
Query: 695 KNYLRQDGGLLFSRAE---PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751
+ L D + K++ V K V GD ND L A G+
Sbjct: 112 CHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH 171
Query: 752 IAGTEVAKEASDMVLADDNFGTIVAA 777
A V +E + +
Sbjct: 172 -APENVIREFPQFPAV-HTYEDLKRE 195
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 51.3 bits (121), Expect = 7e-08
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 12/147 (8%)
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDI 691
P E + I++ K G V V++G I ++G+ A + + +
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANR----------LIV 124
Query: 692 HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751
+ K +G +L A+ ++I ++ + E GDG ND K A + +A
Sbjct: 125 KDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC 184
Query: 752 IAGTEVAKEASDMVLADDNFGTIVAAV 778
+ KE +D+ + + I+ +
Sbjct: 185 --AKPILKEKADICIEKRDLREILKYI 209
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 50.0 bits (118), Expect = 3e-07
Identities = 32/217 (14%), Positives = 63/217 (29%), Gaps = 59/217 (27%)
Query: 620 RLVFVGMVG-LRDPPR---EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH 675
RL + + G L D R + ++I + G+ V +++G+ A+ +G+ G
Sbjct: 4 RLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPV 63
Query: 676 EDISSQSITG--------------KEFMDIHNQKNYLRQDGGLLFSRAE------PRHKQ 715
+ + +F++ +++ +R + A P
Sbjct: 64 FGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVD 123
Query: 716 EIVRLLKEDGEVV----------------------------------AMTGDGVNDAPAL 741
+ + + G V+ + GD ND P
Sbjct: 124 YVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMF 183
Query: 742 KLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778
+L A T+ K SD V I
Sbjct: 184 QLPVRKACPANA-TDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.5 bits (114), Expect = 9e-07
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADD 769
+ ++ L + VA GDG ND A K+ VA+ A ++ KE +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA-PKILKENADYVTKKE 211
Query: 770 NFGTIVAAV 778
A+
Sbjct: 212 YGEGGAEAI 220
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 38.1 bits (87), Expect = 0.003
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 620 RLVFVGMVG-LRDPPR---EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH 675
+ + + + G + P R E+ +AI ++ GI +M++TG+ AEA IG G
Sbjct: 3 KAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPV 62
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 46.1 bits (108), Expect = 8e-06
Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 16/146 (10%)
Query: 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIH 692
R + + E K + ++I D + I F + + T ++
Sbjct: 146 NRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFK---NKLTIFTTYNGHAEVT 202
Query: 693 NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI 752
+ + +++ + V + GD ND L A+
Sbjct: 203 KLGH------------DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVAN 250
Query: 753 AGTEVAKEASDMVLADDNFGTIVAAV 778
A T+ AK + VL + VA +
Sbjct: 251 A-TDSAKSHAKCVLPVSHREGAVAYL 275
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 45.7 bits (107), Expect = 1e-05
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 686 KEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEV----VAMTGDGVNDAPAL 741
KE + R A+ KQ+ + + + GDG ND L
Sbjct: 159 KEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISML 218
Query: 742 KLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778
+ A IGVAMG A E K A+D V A + I A+
Sbjct: 219 RHAAIGVAMGQA-KEDVKAAADYVTAPIDEDGISKAM 254
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 44.9 bits (105), Expect = 2e-05
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778
E A+ GD +ND L+ A GVAMG A E K +D V ++ + +
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTNDEHGVAHMM 281
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 44.2 bits (103), Expect = 3e-05
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778
E + GD ND ++ A +GVA+ A KE ++ V + + A+
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKSNLEDGVAFAI 265
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 43.8 bits (102), Expect = 4e-05
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIY 785
VVA+ GD NDA LK+A AMG A E K+ + D+N + + +++
Sbjct: 208 NVVAI-GDSGNDAEMLKMARYSFAMGNA-AENIKQIARYATDDNNHEGALNVI---QAVL 262
Query: 786 NNMKAF 791
+N F
Sbjct: 263 DNTYPF 268
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.8 bits (103), Expect = 4e-05
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 19/150 (12%)
Query: 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDI 691
+E + GI V + + + E + R+ GV+ ++ + S FMD
Sbjct: 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSN------FMDF 188
Query: 692 HNQKNYLRQDGGLLFSRAEPRHKQEI---VRLLKEDGEVVAMTGDGVNDAPALKL---AD 745
G L+ + + LK++ ++ + GD D +
Sbjct: 189 DENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILL-GDSQGDLRMADGVANVE 247
Query: 746 IGVAMGIAGTEVA------KEASDMVLADD 769
+ +G V ++ D+VL +
Sbjct: 248 HILKIGYLNDRVDELLEKYMDSYDIVLVKE 277
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 42.0 bits (98), Expect = 7e-05
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Query: 675 HEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 734
DI ++G++ + + L L + ++++ E A GD
Sbjct: 46 DADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDD 105
Query: 735 VNDAPALKLADIGVAMGIAGTEVAKEASDMVL 766
D PA A+ A K A D VL
Sbjct: 106 SVDLPAFAACGTSFAVADA-PIYVKNAVDHVL 136
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMV 765
E A+ GD ND P ++ D +G + A+ S ++
Sbjct: 198 ESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 714 KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT 773
+ R+ + E+V GD ND + A + VAM A E KEASD+V +N
Sbjct: 196 RFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLTNNDSG 253
Query: 774 IVAAV 778
+ +
Sbjct: 254 VSYVL 258
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 817 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.96 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.94 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.92 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.89 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.39 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.37 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.34 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.31 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.29 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.25 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.18 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.17 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.16 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.02 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.02 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.98 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.95 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.95 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.95 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.75 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.35 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.28 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.79 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.74 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.73 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.69 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.62 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.56 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.55 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.32 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.29 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.13 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.03 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.0 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.82 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.7 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.69 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.42 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.42 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.28 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.09 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.08 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.02 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.82 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.66 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.41 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.15 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 95.04 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.43 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 94.28 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 93.91 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 93.26 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 91.73 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 88.46 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=2.2e-31 Score=249.60 Aligned_cols=148 Identities=61% Similarity=0.954 Sum_probs=135.5
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHH--HHHhHhhccCCceEEEe
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDI--HNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~r 708 (817)
||+|++++++|+.|+++||+++|+|||+..+|..+|+++|+...+..+....+++.++... .+...... +..+|+|
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~v~ar 96 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACR--RACCFAR 96 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHH--HCCEEES
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhh--hhhhhhc
Confidence 9999999999999999999999999999999999999999988777776777888888766 22223333 4669999
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHh
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~g 781 (817)
++|++|..+++.+|+.|+.|+|+|||.||++||++|||||||+ +++++++++||+++.+++|+.++++|+||
T Consensus 97 ~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999 89999999999999999999999999998
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=3.5e-30 Score=286.01 Aligned_cols=250 Identities=54% Similarity=0.843 Sum_probs=196.8
Q ss_pred ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Q 003468 23 TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDG 102 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 102 (817)
|++||..++|++++.|+||+++|||++||++|+++||+|+++.++++++|+.++++|++++.++|+++++++++++.+..
T Consensus 1 m~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~ 80 (472)
T d1wpga4 1 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE 80 (472)
T ss_dssp CTTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSC
T ss_pred CcChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCc
Q 003468 103 EEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDK 182 (817)
Q Consensus 103 ~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~ 182 (817)
+......|+++++|++++++|+.++++||+|++++++++++..+.. ..||+
T Consensus 81 ---~~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~--------------------------~~~~~ 131 (472)
T d1wpga4 81 ---GEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA--------------------------TEQDK 131 (472)
T ss_dssp ---TTSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC--------------------------CCCCC
T ss_pred ---ccccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc--------------------------ccccC
Confidence 2234457899999999999999999999999999999887654322 13444
Q ss_pred ccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHh
Q 003468 183 VPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQI 262 (817)
Q Consensus 183 iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 262 (817)
+|+|.++
T Consensus 132 ~P~d~~l------------------------------------------------------------------------- 138 (472)
T d1wpga4 132 TPLQQKL------------------------------------------------------------------------- 138 (472)
T ss_dssp CHHHHHH-------------------------------------------------------------------------
T ss_pred chHHHHH-------------------------------------------------------------------------
Confidence 5555433
Q ss_pred hhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCc
Q 003468 263 HEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEG 342 (817)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~ 342 (817)
++++..+.....+++...+...+...........| .......|..+++++++++|+|
T Consensus 139 ----------------~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ai~l~V~~iPEg 195 (472)
T d1wpga4 139 ----------------DEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW-------IRGAIYYFKIAVALAVAAIPEG 195 (472)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHCCTTSSSCCSSSCS-------SSCGGGHHHHHHHHHHHHSCTT
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------HHHHHHHHHHHHHHHHHhChhh
Confidence 22333333333333333322211111111111112 2233456778999999999999
Q ss_pred hHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCC--cccccCccEEEE
Q 003468 343 LPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKT--GTLTTNQMAVTK 397 (817)
Q Consensus 343 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKT--GTLT~~~m~v~~ 397 (817)
||++++++++++++||+|+|++||+++++|++|+..++|+||| +|||.|.+.+..
T Consensus 196 Lp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~~ 252 (472)
T d1wpga4 196 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVC 252 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHHH
Confidence 9999999999999999999999999999999999999999998 999999877643
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=6.9e-28 Score=208.17 Aligned_cols=112 Identities=46% Similarity=0.749 Sum_probs=99.3
Q ss_pred ceEEecCCcc-ceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCCCcc
Q 003468 151 QATVTRDGKK-IPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKK 228 (817)
Q Consensus 151 ~~~V~r~g~~-~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~ 228 (817)
.++|+|+|++ +++|+++||||||||.|++|++|||||+|+++.++.+.||||+|||||.|+.|.+.+.+ ......++.
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 4789999985 35799999999999999999999999999987788899999999999999999876554 233345678
Q ss_pred ceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHh
Q 003468 229 CMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQI 262 (817)
Q Consensus 229 ~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 262 (817)
|++|+||.|.+|++.++|++||.+|.+|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 9999999999999999999999999999998764
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.94 E-value=5.2e-27 Score=231.41 Aligned_cols=205 Identities=18% Similarity=0.243 Sum_probs=146.4
Q ss_pred ccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCC-----eeEeCCChh
Q 003468 392 QMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGN-----HYVASGMPT 466 (817)
Q Consensus 392 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~p~ 466 (817)
-|+|+++|+.+..+ ...+..+.+.. ......+.+..+..++++||++.+..... .+...|+|+
T Consensus 1 ~MTV~~~w~~~~~~------~~~~~~~~~~~------~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~Gdpt 68 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIH------EADTTEDQSGA------TFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDAS 68 (214)
T ss_dssp CCEEEEEEETTEEE------ECCCC------------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHH
T ss_pred CeEEEEEEECCEEE------EcCCCCcCCCc------ccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChH
Confidence 38999999876322 22211111110 11134567788999999999988765332 235679999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeec--CCcEEEEEeCcchHHHh
Q 003468 467 EAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSS--SGNKKLLVKGAVENLLE 544 (817)
Q Consensus 467 e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~--~~~~~~~~KGa~e~il~ 544 (817)
|.||+.++.+.|... ...+..+.++.++||+|.||+|+++++.. ++.+++|+|||||.|++
T Consensus 69 E~ALl~~a~~~~~~~-----------------~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~ 131 (214)
T d1q3ia_ 69 ESALLKCIELSCGSV-----------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILD 131 (214)
T ss_dssp HHHHHHHHHHHHSCH-----------------HHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHH
T ss_pred HHHHHHHHHHhCCCH-----------------HHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHH
Confidence 999999998877632 12345677899999999999999999865 35688999999999999
Q ss_pred ccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEE
Q 003468 545 RSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFV 624 (817)
Q Consensus 545 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~l 624 (817)
+|+++.. +|...++++..++.+.+.+++|+++|+||||||||+++.+..... ...+....+..|+||+|+
T Consensus 132 ~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~---------~~~~~~~~~~~e~~L~fl 201 (214)
T d1q3ia_ 132 RCSSILV-QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRG---------FKFDTDELNFPTEKLCFV 201 (214)
T ss_dssp TEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTT---------CCCCTTTTSSCCSSEEEE
T ss_pred hhhheee-CCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccc---------cccChhhhhhhcCCCEEE
Confidence 9998865 889999999999999999999999999999999999865321111 011223345678999999
Q ss_pred EEeccCCCCcH
Q 003468 625 GMVGLRDPPRE 635 (817)
Q Consensus 625 G~~~~~d~~r~ 635 (817)
|++++.||||+
T Consensus 202 Glvgi~DPPR~ 212 (214)
T d1q3ia_ 202 GLMSMIDHHHH 212 (214)
T ss_dssp EEEEEESCCSC
T ss_pred EEEEEEeCCCC
Confidence 99999999996
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=3.7e-27 Score=211.29 Aligned_cols=124 Identities=44% Similarity=0.654 Sum_probs=108.6
Q ss_pred EEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCC
Q 003468 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDG 702 (817)
Q Consensus 623 ~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (817)
..+.++++|++|++++++|+.|+++|++++|+|||+..++.++|+++||.
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~------------------------------ 61 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------ 61 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh------------------------------
Confidence 45578999999999999999999999999999999999999999999994
Q ss_pred ceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 703 GLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 703 ~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.+|++++|++|..+++.+|.. +.|+|+|||.||+|||++|||||||+ ++++.++++||++++++++.+|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 278999999999999999875 68999999999999999999999999 789999999999999999999999873
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=6.5e-25 Score=220.36 Aligned_cols=225 Identities=31% Similarity=0.500 Sum_probs=164.6
Q ss_pred cEEEEEEEeCCcCC---ccceeeecCCccCCCCCcccC-CC-CCCCCHHHHHHHHHHhHhcCCeeee--cCCeeEeCCCh
Q 003468 393 MAVTKLVAVGSRAG---TLRSFNVQGTTYNPSDGRIEG-WP-VGRMDANLQTIAKISAVCNDAGVEQ--SGNHYVASGMP 465 (817)
Q Consensus 393 m~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~p 465 (817)
|+|.++++.+...+ ....+.+.+..|.|.+..... .+ .....+.+..++.++++||++.+.. .++.+...|+|
T Consensus 1 MtV~~m~v~~~~~~~~~~~~~~~VtG~~y~p~G~i~~~~~~v~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~p 80 (239)
T d1wpga3 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEA 80 (239)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCH
T ss_pred CeeEEEEEEeeecCCcccceEEEEEeEeeCCceEEEECCcCcCccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCC
Confidence 56666666543222 235677888889887665322 11 1234567788999999999998765 45678889999
Q ss_pred hHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCC-----cEEEEEeCcch
Q 003468 466 TEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSG-----NKKLLVKGAVE 540 (817)
Q Consensus 466 ~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~-----~~~~~~KGa~e 540 (817)
+|.||+.++.+.|+....... .............++..+.+++++||+|.||||+|+++..++ .+.+|+|||||
T Consensus 81 TE~ALl~~a~k~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe 159 (239)
T d1wpga3 81 TETALTTLVEKMNVFNTEVRN-LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPE 159 (239)
T ss_dssp HHHHHHHHHHHHCTTCCCCSS-SCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHH
T ss_pred CcHHHHHHHHHhCCChHHhhc-cchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChH
Confidence 999999999999986543211 111111222233445678899999999999999999997654 36899999999
Q ss_pred HHHhccccccccCCceeecCHHHHHHHHHHHHHH--HHhhhceeeeeeecccccccccCCCCCcchhhccCCCCcccccc
Q 003468 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEM--SSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIE 618 (817)
Q Consensus 541 ~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 618 (817)
.|+++|+.+.. +|...++++..++.+.+.++++ +++|+|||+||||+++....... ......+..+|
T Consensus 160 ~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~----------~~~~~~~~~~E 228 (239)
T d1wpga3 160 GVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMV----------LDDSSRFMEYE 228 (239)
T ss_dssp HHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCC----------TTCGGGHHHHT
T ss_pred HHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCccccccc----------ccchhhHHHhc
Confidence 99999998765 7788999999999999999886 78999999999998865321111 11122345689
Q ss_pred CCeEEEEEecc
Q 003468 619 SRLVFVGMVGL 629 (817)
Q Consensus 619 ~~l~~lG~~~~ 629 (817)
+||+|+|++++
T Consensus 229 ~~L~flGlvgi 239 (239)
T d1wpga3 229 TDLTFVGVVGM 239 (239)
T ss_dssp CSEEEEEEEEE
T ss_pred CCCEEEEEECC
Confidence 99999999985
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.89 E-value=2.9e-27 Score=254.84 Aligned_cols=326 Identities=14% Similarity=0.055 Sum_probs=210.9
Q ss_pred cccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHh
Q 003468 368 LPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVC 447 (817)
Q Consensus 368 ~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 447 (817)
..+.|.||...++|+|||||+|.+.|++..+.... . +.. .....+ ..+. .+.....+|
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~-i---l~~--~k~~g~---------------n~~~-dl~~~~~~~ 87 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDK-I---LNK--LKSLGL---------------NSNW-DMLFIVFSI 87 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTH-H---HHH--HHHTTC---------------CCHH-HHHHHHHHH
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchh-h---hHh--hhhcCC---------------ChhH-HHHHHHHHH
Confidence 45569999999999999999999999774322100 0 000 000001 1111 122233334
Q ss_pred cCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeec
Q 003468 448 NDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSS 527 (817)
Q Consensus 448 ~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~ 527 (817)
+.+.... ..++|++.+++...+..+. ........+.....+||++.+|+|+++....
T Consensus 88 ~~~~~~~------~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~ 144 (380)
T d1qyia_ 88 HLIDILK------KLSHDEIEAFMYQDEPVEL-----------------KLQNISTNLADCFNLNEQLPLQFLDNVKVGK 144 (380)
T ss_dssp HHHHHHT------TSCHHHHHHHHHCSSCHHH-----------------HHTTSGGGCSSCCCCCTTTTHHHHTTCCSSH
T ss_pred HHHHHHh------hcCCCcHHHHHHHHhhccc-----------------hHHHHHHhccccccCCcchHHHHHhhhcccc
Confidence 4221111 1355677666654321111 0112234455667899999999998876544
Q ss_pred CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhc
Q 003468 528 SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQL 607 (817)
Q Consensus 528 ~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~ 607 (817)
.+.+..+.+|+++.+.- ++..+..+.+.+..++.+|+|++++|++........
T Consensus 145 ~~~~~~~~~~a~~~~~~---------------~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~------------ 197 (380)
T d1qyia_ 145 NNIYAALEEFATTELHV---------------SDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK------------ 197 (380)
T ss_dssp HHHHHHHHHHHHHHTTC---------------SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCS------------
T ss_pred cchhHhhhhccHhhcCC---------------cHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccccc------------
Confidence 34444555666665421 222234456677889999999999998865331000
Q ss_pred cCCCCccccccCCeEEEEEeccCCCC--cHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccCh
Q 003468 608 LLNPTNYSSIESRLVFVGMVGLRDPP--REEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITG 685 (817)
Q Consensus 608 ~~~~~~~~~~e~~l~~lG~~~~~d~~--r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~ 685 (817)
...+....|++..++++ +++++++++.|+++|++++|+|||+..+|..+++++|+...... ...+++
T Consensus 198 ---------~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~--~~i~~~ 266 (380)
T d1qyia_ 198 ---------IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA--DFIATA 266 (380)
T ss_dssp ---------CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCG--GGEECH
T ss_pred ---------cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCc--ceEEec
Confidence 01122345888899984 56999999999999999999999999999999999999642111 123455
Q ss_pred hHHHHHHHHhHhh----cc-----CCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCC---ceEEeCCC
Q 003468 686 KEFMDIHNQKNYL----RQ-----DGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD---IGVAMGIA 753 (817)
Q Consensus 686 ~~~~~~~~~~~~~----~~-----~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~---vgiamg~~ 753 (817)
++........... .. .....++|.+|++|..+++.++..++.|+|+|||.||++|++.|| |||+||..
T Consensus 267 ~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~ 346 (380)
T d1qyia_ 267 SDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK 346 (380)
T ss_dssp HHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred chhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCC
Confidence 5543332110000 00 012346789999999999999999999999999999999999999 99999988
Q ss_pred ccHHHHh----hcCEEeccCCccHHHHHH
Q 003468 754 GTEVAKE----ASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 754 ~~~~ak~----~ad~vl~~~~~~~i~~~i 778 (817)
+++..++ .||+++.+ +..+.+++
T Consensus 347 g~~~~~el~~~~AD~ii~~--~~el~~il 373 (380)
T d1qyia_ 347 GKDAAGELEAHHADYVINH--LGELRGVL 373 (380)
T ss_dssp BGGGHHHHHHTTCSEEESS--GGGHHHHH
T ss_pred CcccHHHHHhCCCCEEECC--HHHHHHHH
Confidence 8866544 79999954 77666654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.39 E-value=1.1e-12 Score=129.96 Aligned_cols=149 Identities=26% Similarity=0.245 Sum_probs=103.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCC-----ccc-------cc-------------------
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH-----EDI-------SS------------------- 680 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~-----~~~-------~~------------------- 680 (817)
.+.+++.++|++|+++|++++++||++...+..++..+++...- ..+ ..
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 47899999999999999999999999999999999999874310 000 00
Q ss_pred ------------------cccChhHHHHHHHHhHh---hccCCceEEEecCcccHHHHHHH----HhcCCCEEEEEcCCc
Q 003468 681 ------------------QSITGKEFMDIHNQKNY---LRQDGGLLFSRAEPRHKQEIVRL----LKEDGEVVAMTGDGV 735 (817)
Q Consensus 681 ------------------~~~~~~~~~~~~~~~~~---~~~~~~~v~~r~~p~~K~~iv~~----l~~~~~~v~~~GDg~ 735 (817)
.....+.+..+.+.... .......+........|...++. ++...+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 00001111111111100 00011122233344567665555 444567899999999
Q ss_pred cCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHh
Q 003468 736 NDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 736 ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~g 781 (817)
||++||+.||+||||| ++++.+|++||+|+.+++.+++++++++.
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 9999999999999999 78889999999999999999999988653
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.37 E-value=3.6e-12 Score=125.89 Aligned_cols=149 Identities=16% Similarity=0.130 Sum_probs=102.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCC-----ccc------cccccChhH------------
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH-----EDI------SSQSITGKE------------ 687 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~-----~~~------~~~~~~~~~------------ 687 (817)
.++.+++.++++.|++.|++++++||++...+..++..+|+...- ..+ .......+.
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 457899999999999999999999999999999999999985320 000 000011111
Q ss_pred -----------------------HHHHHHHhHh----hccCCceEEEecCcccHHHHHHHHh----cCCCEEEEEcCCcc
Q 003468 688 -----------------------FMDIHNQKNY----LRQDGGLLFSRAEPRHKQEIVRLLK----EDGEVVAMTGDGVN 736 (817)
Q Consensus 688 -----------------------~~~~~~~~~~----~~~~~~~v~~r~~p~~K~~iv~~l~----~~~~~v~~~GDg~N 736 (817)
.+.+...... +......+-.......|...++.+. -..+.|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 1111110000 0000111111223357766665443 34567999999999
Q ss_pred CHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 737 DAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 737 D~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
|.+|++.|++||||+ ++.+.+|+.||+++..++..+|.+++++
T Consensus 179 D~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred hHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 999999999999999 6888899999999999999999999864
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.34 E-value=5.2e-12 Score=129.55 Aligned_cols=67 Identities=28% Similarity=0.312 Sum_probs=57.8
Q ss_pred cHHHHHHHHh----cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 713 HKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 713 ~K~~iv~~l~----~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
.|..-++.+. ...+.|+++|||.||.+||+.|++||||+ ++++.+|+.||+++.+++.+|+.++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 6866555554 34568999999999999999999999999 6888899999999999999999998853
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.31 E-value=6.7e-12 Score=127.71 Aligned_cols=67 Identities=24% Similarity=0.302 Sum_probs=58.2
Q ss_pred ccHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.+|...++.+.+ ..+.++++|||.||.+||+.|++||||+ ++.+.+|+.|++++.+++.+|+.++++
T Consensus 196 ~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 196 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 368776666544 3567999999999999999999999999 688888999999999999999999886
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=4.2e-12 Score=129.09 Aligned_cols=67 Identities=28% Similarity=0.335 Sum_probs=57.9
Q ss_pred ccHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..|..-++.+.+ ..+.|++||||.||.+||+.|+.||||+ ++.+.+|+.|++|+.+++.+|+.++|+
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 358766655533 4567999999999999999999999999 688999999999999999999999885
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.25 E-value=1.3e-11 Score=124.80 Aligned_cols=68 Identities=35% Similarity=0.327 Sum_probs=58.7
Q ss_pred ccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 712 RHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 712 ~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
..|...++.+ .-..+.++++|||.||++||+.|+.||||+ ++++.+|+.||+|+.+++.+++.++|++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 3576655555 335678999999999999999999999999 7889999999999999999999999964
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.18 E-value=5.1e-11 Score=121.71 Aligned_cols=66 Identities=21% Similarity=0.229 Sum_probs=52.5
Q ss_pred cHHHHHHH----HhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccC-CccHHHHHHH
Q 003468 713 HKQEIVRL----LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADD-NFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~----l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~-~~~~i~~~i~ 779 (817)
.|...++. ++...+.|+++|||.||.+||+.||+||||+ ++.+.+|+.||+++..+ +..++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 45444443 4444578999999999999999999999999 78899999999999755 4455777774
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.17 E-value=7.3e-11 Score=119.58 Aligned_cols=67 Identities=30% Similarity=0.316 Sum_probs=58.0
Q ss_pred ccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..|...++.+ ......|++||||.||.+||+.||+||||+ ++++.+|+.||+++.+++.+|++++|+
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3676666554 444567999999999999999999999999 788999999999999999999999885
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.16 E-value=7.1e-11 Score=110.19 Aligned_cols=106 Identities=21% Similarity=0.226 Sum_probs=86.1
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHH--
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQE-- 716 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~-- 716 (817)
.+|+.|++.|+.+.++||+....+...++++++.. ++. ...+|..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-------------------------------~~~--~~~~K~~~l 85 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------------FFL--GKLEKETAC 85 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------------EEE--SCSCHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-------------------------------ccc--ccccHHHHH
Confidence 47999999999999999999999999999999842 111 2234433
Q ss_pred --HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH-HHHHH
Q 003468 717 --IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT-IVAAV 778 (817)
Q Consensus 717 --iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~-i~~~i 778 (817)
+.+.++-..+.|+++||+.||.|||+.|++|+||+ ++.+.+|+.||+|+..+.-.+ +.+++
T Consensus 86 ~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~ 149 (177)
T d1k1ea_ 86 FDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMS 149 (177)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHH
T ss_pred HHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHH
Confidence 44455556789999999999999999999999999 789999999999999877665 44443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.02 E-value=4.8e-10 Score=108.22 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=94.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
..+.....++.+ +.+.+++++|+.............++....... .... ............+.
T Consensus 70 ~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--l~~~--------------~~~~~~~~~~~~~~ 132 (206)
T d1rkua_ 70 PLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHK--LEID--------------DSDRVVGYQLRQKD 132 (206)
T ss_dssp CCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEE--EEEC--------------TTSCEEEEECCSSS
T ss_pred ccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcce--eeee--------------cccccccccccchh
Confidence 455566666665 578999999999999999999998885421100 0000 00012223344556
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
.+...++.++...+.|+|||||.||++||+.||+||||+ ++.++.++++|+++.+ +++.+.+++.+
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~~-~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVH-TYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEEC-SHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceeec-CHHHHHHHHHH
Confidence 677888899999999999999999999999999999995 7788888888998864 67778877644
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=2.1e-10 Score=111.97 Aligned_cols=121 Identities=20% Similarity=0.316 Sum_probs=89.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE--e-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--R- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r- 708 (817)
+++|++.++|+.|+++|++++++||.....+..+++.+|+...+ +....+. +. .+..+.. .
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an~~~-------------~~-~~G~~~g~~~~ 145 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRLK-------------FY-FNGEYAGFDET 145 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECEE-------------EC-TTSCEEEECTT
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeeeeee-------------ee-ehhccccceee
Confidence 36899999999999999999999999999999999999996321 0000000 00 0011111 1
Q ss_pred ---cCcccHHHHHHHHhcC--CCEEEEEcCCccCHHHhhhCCceEEeCCC-ccHHHHhhcCEEecc
Q 003468 709 ---AEPRHKQEIVRLLKED--GEVVAMTGDGVNDAPALKLADIGVAMGIA-GTEVAKEASDMVLAD 768 (817)
Q Consensus 709 ---~~p~~K~~iv~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg~~-~~~~ak~~ad~vl~~ 768 (817)
..+..|..+++.++.. .+.++++|||.||++|++.||++||++.+ ..+..++.||+++.+
T Consensus 146 ~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 146 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred eeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 2356798999888653 46799999999999999999999999833 345677889999864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.98 E-value=9.7e-10 Score=109.43 Aligned_cols=145 Identities=13% Similarity=0.097 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc-------ccccc------------------------
Q 003468 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI-------SSQSI------------------------ 683 (817)
Q Consensus 635 ~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-------~~~~~------------------------ 683 (817)
++..+++.++++.|+.++++||++...+..+.+.+++..++..+ +...-
T Consensus 21 ~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T d1s2oa1 21 LEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhh
Confidence 34556677778889999999999999999999999985432111 00000
Q ss_pred -------------------------ChhHHHHHHHHhHhh-------ccCCceEEEecCcccHHHHHHHHhcC----CCE
Q 003468 684 -------------------------TGKEFMDIHNQKNYL-------RQDGGLLFSRAEPRHKQEIVRLLKED----GEV 727 (817)
Q Consensus 684 -------------------------~~~~~~~~~~~~~~~-------~~~~~~v~~r~~p~~K~~iv~~l~~~----~~~ 727 (817)
....+..+....... ...+..+........|...++.+.+. .+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~ 180 (244)
T d1s2oa1 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred cccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhh
Confidence 000011111110000 00111222223446787777766443 467
Q ss_pred EEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcC-------EEeccCCccHHHHHHHH
Q 003468 728 VAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASD-------MVLADDNFGTIVAAVGE 780 (817)
Q Consensus 728 v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad-------~vl~~~~~~~i~~~i~~ 780 (817)
|+++|||.||.+||+.||.||||+ ++.+.+|+.|| ++...++..|+.+++++
T Consensus 181 ~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 181 TLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 999999999999999999999999 67777788888 67777778888888864
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.95 E-value=5.1e-10 Score=110.04 Aligned_cols=145 Identities=19% Similarity=0.121 Sum_probs=102.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccc--cccChhHHHHHHHHhHhhccCCceEEEec
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISS--QSITGKEFMDIHNQKNYLRQDGGLLFSRA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 709 (817)
+++|++.+.++.|++.|++++++|+.....+..+++++|+... +.. ....+.... ..........+...
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~an~~~~~~~~~~------~~~~~~~~~~~~~~ 145 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYCNHASFDNDYIH------IDWPHSCKGTCSNQ 145 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEEEEEECSSSBCE------EECTTCCCTTCCSC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eeeeeEEEeCCcce------eccccccccccccC
Confidence 4689999999999999999999999999999999999887431 000 000000000 00000011122356
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHh-hcCEEeccCCccHHHHHHHHhHHHHHh
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKE-ASDMVLADDNFGTIVAAVGEGRSIYNN 787 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~-~ad~vl~~~~~~~i~~~i~~gR~~~~~ 787 (817)
.|..|..+++.++..++.|+++||+.||++|++.||+++|++ ...+.+++ ..+++. -++|+.|...+++-....+.
T Consensus 146 k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~ 222 (226)
T d2feaa1 146 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEW 222 (226)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHH
T ss_pred CHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHH
Confidence 788899999999999999999999999999999999999998 44444444 444443 45788888888665554443
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.95 E-value=5.3e-10 Score=111.09 Aligned_cols=43 Identities=16% Similarity=0.249 Sum_probs=39.0
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
.+...+.++++|++|+++|+.++++|||+...+..+.+.+++.
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4455678899999999999999999999999999999999985
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.95 E-value=3.9e-10 Score=109.14 Aligned_cols=128 Identities=23% Similarity=0.336 Sum_probs=94.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceE--EEe
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLL--FSR 708 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~r 708 (817)
.++.+++.+.++.++..|..++++||.....+....++.+....... .+..++ .... ...
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~ 135 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN----RLIVKD--------------GKLTGDVEG 135 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE----EEEEET--------------TEEEEEEEC
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh----hhcccc--------------ccccccccc
Confidence 46778899999999999999999999999999999998887531100 000000 0000 000
Q ss_pred ------cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 709 ------AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 709 ------~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
..+.....+.+.++...+.++++|||.||++|++.||+|||| ++.+..++.||+|+.++++++|+++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 136 EVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp SSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 011223445556666678899999999999999999999999 36788899999999998999988765
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=2.3e-08 Score=98.00 Aligned_cols=41 Identities=7% Similarity=0.126 Sum_probs=38.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
.+.+.+++++++|+++|+.++++|||+...+..+.+++++.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46778899999999999999999999999999999999984
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.35 E-value=1.1e-07 Score=93.46 Aligned_cols=54 Identities=11% Similarity=0.194 Sum_probs=46.0
Q ss_pred ccHHHHHHHHhc-CCCEEEEEcCC----ccCHHHhhhCC-ceEEeCCCccHHHHhhcCEEe
Q 003468 712 RHKQEIVRLLKE-DGEVVAMTGDG----VNDAPALKLAD-IGVAMGIAGTEVAKEASDMVL 766 (817)
Q Consensus 712 ~~K~~iv~~l~~-~~~~v~~~GDg----~ND~~~l~~A~-vgiamg~~~~~~ak~~ad~vl 766 (817)
..|..-++.|.+ ..+.|++|||+ .||.+||+.|+ .|+||+ ++.+.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 568777787754 46789999995 59999999998 699999 78999999999876
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.28 E-value=7.2e-07 Score=86.68 Aligned_cols=61 Identities=16% Similarity=0.342 Sum_probs=44.6
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.+|...++.+... ..++++||+.||.+||+.|+.|+||++ |. .+.+|++.+.+ ...+..++
T Consensus 158 ~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~-g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKV-GE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEE-SS--SCCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEe-CC--CCccCeEEcCC--HHHHHHHH
Confidence 5799999998875 578999999999999999976655542 21 14578999865 33444443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.79 E-value=1.6e-05 Score=76.99 Aligned_cols=125 Identities=17% Similarity=0.171 Sum_probs=82.5
Q ss_pred CcHHHHHHHHHHHHcC-CeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 633 PREEVRQAIEDCKAAG-IRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+-|++.+++++|++.| +++.++|+.....+....+..|+...-.. .+.+++. ......|
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~----i~~~~~~----------------~~~k~~p 151 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF----GAFADDA----------------LDRNELP 151 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC----EECTTTC----------------SSGGGHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc----ccccccc----------------ccccchh
Confidence 3578999999999987 89999999999999999999999642111 0110000 0000011
Q ss_pred ccHHHHHHHH---hcCCCEEEEEcCCccCHHHhhhCCc---eEEeCCCccHH-HHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLL---KEDGEVVAMTGDGVNDAPALKLADI---GVAMGIAGTEV-AKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l---~~~~~~v~~~GDg~ND~~~l~~A~v---giamg~~~~~~-ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..-...++.+ +-..+.++||||+.+|+.|-+.||+ +|+.|....+. .+..||+++. +++.+...+.
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred HHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 1112233334 2345789999999999999999994 45556444443 4446899985 4877777764
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=4.8e-06 Score=81.28 Aligned_cols=51 Identities=20% Similarity=0.292 Sum_probs=35.6
Q ss_pred ccHHHHHHHHhc-CCCEEEEEcC----CccCHHHhhhCC-ceEEeCCCccHHHHhhcCE
Q 003468 712 RHKQEIVRLLKE-DGEVVAMTGD----GVNDAPALKLAD-IGVAMGIAGTEVAKEASDM 764 (817)
Q Consensus 712 ~~K~~iv~~l~~-~~~~v~~~GD----g~ND~~~l~~A~-vgiamg~~~~~~ak~~ad~ 764 (817)
.+|..-++.+.. ..+.|++||| |.||.+||+.|+ .|++++ +. +..++.++.
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~-~~~~~~~~~ 240 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-AP-EDTRRICEL 240 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SH-HHHHHHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CH-HHHHHHHHH
Confidence 457666665543 4689999999 789999999998 688887 44 444655543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.73 E-value=2.4e-05 Score=74.98 Aligned_cols=116 Identities=18% Similarity=0.185 Sum_probs=82.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|+++|+++.++|+.....+..+.+.+|+...-. ..+..++ .-..+..|+
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~----~i~~~~~----------------~~~~Kp~~~ 148 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----ALASAEK----------------LPYSKPHPQ 148 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEECTT----------------SSCCTTSTH
T ss_pred ccchHHHHHHHhhhcccccccccccccccccccccccccccccc----ccccccc----------------cccchhhHH
Confidence 46899999999999999999999999999999999999953211 1111110 001123344
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeC--CCccHHHHhhcCEEecc
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMG--IAGTEVAKEASDMVLAD 768 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg--~~~~~~ak~~ad~vl~~ 768 (817)
--..+++.++-..+.+++|||+.+|+.|-+.||+.. ++. ....+.....||+++.+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~ 207 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 207 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC
Confidence 456778888888899999999999999999999864 332 11122233568888765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.69 E-value=1.2e-05 Score=77.44 Aligned_cols=124 Identities=19% Similarity=0.256 Sum_probs=87.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-..+ +...+ .-.....|+
T Consensus 96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~----~~~~~----------------~~~~kp~p~ 155 (224)
T d2hsza1 96 LYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEM----LGGQS----------------LPEIKPHPA 155 (224)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE----ECTTT----------------SSSCTTSSH
T ss_pred hHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccc----ccccc----------------cccccccch
Confidence 5799999999999999999999999999999999999986421110 00000 000123355
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEeC--CC-ccHHHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAMG--IA-GTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg--~~-~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
--..+.+.++...+.+++|||+.+|+.+-+.||+ .|.+. .+ ..+.....+|+++.+ +..+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC--HHHHHHhh
Confidence 5567777888888999999999999999999997 34333 11 223445568998864 66665543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.62 E-value=8.2e-05 Score=73.79 Aligned_cols=132 Identities=14% Similarity=0.188 Sum_probs=83.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++|+++++.++.|++.|++++++||--...+..+++++|+...+..+++..+.-+ +..+...
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~---------------~~~~~~~~~~ 199 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFD---------------ENGVLKGFKG 199 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEEC---------------TTSBEEEECS
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEe---------------CCeeEeeccC
Confidence 4899999999999999999999999999999999999998653322222111000 0001111
Q ss_pred --cCcccHHHHH----HH--HhcCCCEEEEEcCCccCHHHhhhC---CceEEeC--CCccH----HHHhhcCEEeccCCc
Q 003468 709 --AEPRHKQEIV----RL--LKEDGEVVAMTGDGVNDAPALKLA---DIGVAMG--IAGTE----VAKEASDMVLADDNF 771 (817)
Q Consensus 709 --~~p~~K~~iv----~~--l~~~~~~v~~~GDg~ND~~~l~~A---~vgiamg--~~~~~----~ak~~ad~vl~~~~~ 771 (817)
.....|...+ .+ .......|+++|||.||+.|.+.+ +.+++.| +...+ .-+++-|+|+.+|.-
T Consensus 200 ~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~ 279 (291)
T d2bdua1 200 ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEES 279 (291)
T ss_dssp SCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCB
T ss_pred CccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCC
Confidence 1123343222 22 223457899999999999998743 3444333 22222 234678999887766
Q ss_pred cHHHHHH
Q 003468 772 GTIVAAV 778 (817)
Q Consensus 772 ~~i~~~i 778 (817)
-.++..|
T Consensus 280 ~~v~~~i 286 (291)
T d2bdua1 280 LEVVNSI 286 (291)
T ss_dssp CHHHHHH
T ss_pred hhHHHHH
Confidence 5555554
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.56 E-value=0.00013 Score=67.53 Aligned_cols=127 Identities=24% Similarity=0.297 Sum_probs=80.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHh----Hh-hccCCceEEE
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQK----NY-LRQDGGLLFS 707 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~v~~ 707 (817)
+-|++.++++.|+++|++++++|....... |.. .......+.... .. -.......+|
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~-------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 89 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIAR-------GKF-----------TEAQFETLTEWMDWSLADRDVDLDGIYYC 89 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHH-------TSS-----------CHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhh-------hhh-----------HHHhhhhhhhhhhhhhhhhcccccceeec
Confidence 458999999999999999999998764221 110 011111110000 00 0000112222
Q ss_pred ------------------ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce--EEe--CCCccHHHHhhcCEE
Q 003468 708 ------------------RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG--VAM--GIAGTEVAKEASDMV 765 (817)
Q Consensus 708 ------------------r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg--iam--g~~~~~~ak~~ad~v 765 (817)
...|.--..+++.++...+.++||||..+|+.|-+.|+++ +.+ |....+.....||++
T Consensus 90 p~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v 169 (182)
T d2gmwa1 90 PHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWV 169 (182)
T ss_dssp CCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEE
T ss_pred ccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEE
Confidence 2334444667788887788899999999999999999985 333 322345566779999
Q ss_pred eccCCccHHHHHHH
Q 003468 766 LADDNFGTIVAAVG 779 (817)
Q Consensus 766 l~~~~~~~i~~~i~ 779 (817)
+.+ +..+++.|+
T Consensus 170 ~~~--l~dl~~~ik 181 (182)
T d2gmwa1 170 LNS--LADLPQAIK 181 (182)
T ss_dssp ESC--GGGHHHHHH
T ss_pred ECC--HHHHHHHhc
Confidence 865 888888775
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.55 E-value=7.8e-05 Score=73.37 Aligned_cols=97 Identities=20% Similarity=0.212 Sum_probs=72.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+.....+ ..+++++. ...+..|
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d---~~~~~d~~----------------~~~KP~p 159 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD---FLVTPDDV----------------PAGRPYP 159 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS---CCBCGGGS----------------SCCTTSS
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccc---cccccccc----------------cccccCh
Confidence 4679999999999999999999999999999999999988542111 11111110 0112345
Q ss_pred ccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCce
Q 003468 712 RHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 712 ~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
+.-...++.++.. .+.++||||+.+|+.+-+.||+-
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ 196 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMW 196 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCE
Confidence 5556777778764 57899999999999999999973
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.32 E-value=0.00012 Score=69.37 Aligned_cols=117 Identities=12% Similarity=0.151 Sum_probs=82.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.+++.++++.++..+ ++.++|+.....+..+.+.+|+...- ...+.+.
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--------------------------d~v~~~~~~~ 136 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--------------------------DGIYGSSPEA 136 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--------------------------SEEEEECSSC
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--------------------------cccccccccc
Confidence 35688999999998775 89999999999999999999986421 1112222
Q ss_pred -cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc---eEEeCCCccH-HHHhhcCEEeccCCccHHHHH
Q 003468 709 -AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GVAMGIAGTE-VAKEASDMVLADDNFGTIVAA 777 (817)
Q Consensus 709 -~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamg~~~~~-~ak~~ad~vl~~~~~~~i~~~ 777 (817)
..|+....+++.++-..+.+++|||+.+|+.|-+.||+ +|+-|....+ .....+|+++.+ +..+...
T Consensus 137 ~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 137 PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred cccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 22344455666666677899999999999999999997 4443422233 333458999765 6666554
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.29 E-value=0.00027 Score=68.01 Aligned_cols=125 Identities=18% Similarity=0.211 Sum_probs=86.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+ +|++++++|+........+.+.+|+...- ..++...+.. ..+..|
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f----d~i~~s~~~~----------------~~KP~~ 158 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF----DSITTSEEAG----------------FFKPHP 158 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC----SEEEEHHHHT----------------BCTTSH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc----cccccccccc----------------ccchhh
Confidence 46789999999996 58999999999999999999999985321 1111111100 011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCceEE-eCC-CccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGVA-MGI-AGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgia-mg~-~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+-=..+++.++-..+.+++|||. .+|+.+-+.||+-.. +.. .........+|+++.+ ++.+..+++
T Consensus 159 ~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 227 (230)
T d1x42a1 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHH
T ss_pred HHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHH
Confidence 33456677777777889999998 589999999998633 211 2223345678999865 888888875
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.00033 Score=67.90 Aligned_cols=118 Identities=15% Similarity=0.154 Sum_probs=84.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
.+.|++.+++++|+++|+++.++|+..........+.+|+..-..... ... +.....+..|
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------d~~~~~KP~p 187 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD-GHF------------------DTKIGHKVES 187 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS-EEE------------------CGGGCCTTCH
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcc-eee------------------ccccccCCCc
Confidence 468999999999999999999999999999998888888753211100 000 0000112334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe----CCCccHHHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM----GIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam----g~~~~~~ak~~ad~vl~~ 768 (817)
+-=...++.++-..+.++||||..+|+.+-++||+-... |+.........++.++.+
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s 248 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 248 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECC
Confidence 444667788888889999999999999999999997554 444444445667777653
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.03 E-value=0.00066 Score=61.33 Aligned_cols=89 Identities=8% Similarity=-0.048 Sum_probs=67.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCH-hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNK-NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+..++... ...+.....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~---------------------------~~~~~~~~k 98 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKY---------------------------FIQREIYPG 98 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGG---------------------------CSEEEESSS
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccc---------------------------ceeeecccC
Confidence 4689999999999999999999997654 556666677776421 112223333
Q ss_pred c--ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 711 P--RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 711 p--~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
| +.-..+++.++...+.+++|||..+|+.+-+.||+-
T Consensus 99 p~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 99 SKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVT 137 (164)
T ss_dssp CHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred CChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCE
Confidence 3 334567777887889999999999999999999985
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.00 E-value=0.00016 Score=68.15 Aligned_cols=117 Identities=14% Similarity=0.185 Sum_probs=79.4
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++.|+++.++|+... .+..+.+.+|+...- ..++..+ ........|+
T Consensus 83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f----~~i~~s~----------------~~~~~Kp~~~ 141 (204)
T d2go7a1 83 LMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF----TEILTSQ----------------SGFVRKPSPE 141 (204)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE----EEEECGG----------------GCCCCTTSSH
T ss_pred ccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc----ccccccc----------------cccccchhHH
Confidence 569999999999999999999998665 456778889985321 1111110 0011123455
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCccHHHHhhcCEEeccCCccHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGTEVAKEASDMVLADDNFGTIVAA 777 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~~~ak~~ad~vl~~~~~~~i~~~ 777 (817)
--..+++.++-..+.++||||+.+|+.+-+.||+. |++. .+.. .+|..+.+ +..+..+
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~~--~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQA--LADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECSS--TTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCCC----CcCeecCC--HHHHHHH
Confidence 55777888888888999999999999999999986 4454 3322 25555432 4445443
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.82 E-value=0.00035 Score=68.31 Aligned_cols=39 Identities=10% Similarity=0.328 Sum_probs=32.3
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI 669 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 669 (817)
+.+=+++.++|++|+++|++++++|+....+...+++++
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333488999999999999999999998877777776654
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.70 E-value=0.00015 Score=68.69 Aligned_cols=119 Identities=13% Similarity=0.183 Sum_probs=82.2
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|++ ++++.++|+.....+..+.+.+|+...- ..++..++. -.....|+
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f----~~i~~~~~~----------------~~~KP~p~ 141 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM----AVTISADDT----------------PKRKPDPL 141 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE----EEEECGGGS----------------SCCTTSSH
T ss_pred cccchhhhhhhhcc-cccccccccccccccccccccccccccc----ccccccccc----------------ccchhhhh
Confidence 45899999999975 7999999999999999999999885321 111111100 01123455
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe---CCCccHHHHhhcCEEeccCCccHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM---GIAGTEVAKEASDMVLADDNFGTIV 775 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam---g~~~~~~ak~~ad~vl~~~~~~~i~ 775 (817)
--..+++.++-..+.++||||+.+|+.+-+.||+...+ |. .+....+.+|+++. ++..|+
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~-~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGM-DPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGC-CTTGGGSCCSEEES--SGGGGG
T ss_pred hhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCC-CChhHhhhcCcEeC--CHHHHH
Confidence 55777777877778899999999999999999998653 42 22333456788874 355443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.69 E-value=0.0023 Score=61.81 Aligned_cols=124 Identities=12% Similarity=0.124 Sum_probs=84.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|+ .|++++++|+.+........+.+|+...-.. ++...+. -.....|+
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~----i~~s~~~----------------~~~KP~p~ 168 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDA----IVIGGEQ----------------KEEKPAPS 168 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE----EEEGGGS----------------SSCTTCHH
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccc----ccccccc----------------ccchhhhh
Confidence 6799999999998 5899999999999999999999998532111 1110000 00122233
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce-EEeCCC---ccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG-VAMGIA---GTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg-iamg~~---~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
-=..+++.++-..+.+++|||.. +|+.+-+.||+. +..-+. ........+|+++.+ +..+..+++
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~ 238 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECC--HHHHHHHHH
Confidence 33567777777778899999995 899999999996 433111 111223457888865 777877774
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.42 E-value=0.0028 Score=58.36 Aligned_cols=89 Identities=18% Similarity=0.318 Sum_probs=63.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCH----hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNK----NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+.|++.+.++.+++.|++|+.+|||.. .|+..+.+.+|+...+. ...++.+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~-------------------------~~vll~~ 141 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM-------------------------NPVIFAG 141 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB-------------------------CCCEECC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccc-------------------------cceEeeC
Confidence 468999999999999999999999854 45566667788854321 2223333
Q ss_pred cC--cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEe
Q 003468 709 AE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAM 750 (817)
Q Consensus 709 ~~--p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giam 750 (817)
.. ...|...++. ...++++||..+|..+-..|++ +|-.
T Consensus 142 ~~~~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 142 DKPGQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCTTCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCCCchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 22 2345666553 3589999999999999999985 3543
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.42 E-value=0.0028 Score=61.44 Aligned_cols=58 Identities=14% Similarity=0.214 Sum_probs=38.4
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCc-eEEe--CCCccHHHH---hhcCEEecc
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADI-GVAM--GIAGTEVAK---EASDMVLAD 768 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~v-giam--g~~~~~~ak---~~ad~vl~~ 768 (817)
|+--..+++.++-..+.++||||+. +|+.+.++||+ +|.+ |....+... ..+|+++.+
T Consensus 179 p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~s 243 (250)
T d2c4na1 179 PWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred hhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECC
Confidence 3333556777777788999999996 59999999997 3444 422222211 234888765
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.28 E-value=0.0031 Score=57.98 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=72.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+.++.|++.|++++++|+.+... ....+.+|+...- ...+.+++. -.....|
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~f----d~i~~~~~~----------------~~~KP~p 137 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAYF----TEVVTSSSG----------------FKRKPNP 137 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGGE----EEEECGGGC----------------CCCTTSC
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhcccccc----ccccccccc----------------cccCCCH
Confidence 356899999999999999999999876654 4567888875311 111111110 0011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDM 764 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~ 764 (817)
+--..+.+.++- +.+++|||..+|+.+-+.||+-...= .+.+..++..|+
T Consensus 138 ~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~ 187 (187)
T d2fi1a1 138 ESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred HHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcCC
Confidence 444555565553 45899999999999999999985443 455666766653
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.09 E-value=0.0022 Score=56.48 Aligned_cols=99 Identities=13% Similarity=0.051 Sum_probs=60.7
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhc-cCCceEEEe
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLR-QDGGLLFSR 708 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~r 708 (817)
++.+.|++.+.++.|+++|++++++||++......+.+.+ .........+. ......+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l-------------------~~~~~~~~~~~~~~~~~~~~~ 94 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-------------------RMTRKWVEDIAGVPLVMQCQR 94 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-------------------HHHHHHHHHTTCCCCSEEEEC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH-------------------HHHhhhhhhcCCCcEEEeecc
Confidence 5788999999999999999999999999743221111111 10000000000 001112221
Q ss_pred ------cCcccHHHHHHHHhcCC-CEEEEEcCCccCHHHhhhCCce
Q 003468 709 ------AEPRHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 709 ------~~p~~K~~iv~~l~~~~-~~v~~~GDg~ND~~~l~~A~vg 747 (817)
..+..|..+.+.+...+ ..++++||...|+.|.+.+|+-
T Consensus 95 ~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 95 EQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred cccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 12345666776665554 4567899999999999999986
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.08 E-value=0.0058 Score=59.47 Aligned_cols=62 Identities=26% Similarity=0.287 Sum_probs=43.4
Q ss_pred HHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCc-eEEeC--CCccHHHHh---hcCEEeccCCccHHHHHH
Q 003468 715 QEIVRLLKEDGEVVAMTGDGV-NDAPALKLADI-GVAMG--IAGTEVAKE---ASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 715 ~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~v-giamg--~~~~~~ak~---~ad~vl~~~~~~~i~~~i 778 (817)
..+.+.++-..+.++||||+. +|+.+-+.||+ +|.+. ....+.... .+|+++.+ +..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~--l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKN--LGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESS--HHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECC--HHHHHHHh
Confidence 556677777788999999995 69999999997 45553 222222232 24899864 77777765
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.02 E-value=0.0043 Score=58.08 Aligned_cols=41 Identities=24% Similarity=0.118 Sum_probs=32.7
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEeC
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAMG 751 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg 751 (817)
|.--..+++.++-..+.++||||..+|+.+-+.|++ +|.+.
T Consensus 132 p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 132 PGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp CHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred chhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 344456677777777889999999999999999999 45553
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.82 E-value=0.0036 Score=59.02 Aligned_cols=122 Identities=12% Similarity=0.210 Sum_probs=84.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.+++.++++.+++.|+++.++|+..........+..++...-..+ +...+ .-..+..|+
T Consensus 94 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~----~~s~~----------------~~~~KP~p~ 153 (220)
T d1zrna_ 94 PFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHL----LSVDP----------------VQVYKPDNR 153 (220)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE----EESGG----------------GTCCTTSHH
T ss_pred ccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccce----eeeee----------------eeccccHHH
Confidence 4678899999999999999999999999999888888875321110 00000 000123344
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC---CccHHHHhhcCEEeccCCccHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI---AGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~---~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
-=..+++.++-..+.+++|||..+|+.+-+.||+-.+.-+ ...+.....+|+++.+ +..+.+
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~--l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECC--HHHHHh
Confidence 4466788888888899999999999999999998855321 1222234457888754 655543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.66 E-value=0.0082 Score=58.09 Aligned_cols=58 Identities=21% Similarity=0.162 Sum_probs=39.9
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCcc-CHHHhhhCCc-eEEeC--CCccHHHHhh---cCEEecc
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVN-DAPALKLADI-GVAMG--IAGTEVAKEA---SDMVLAD 768 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~N-D~~~l~~A~v-giamg--~~~~~~ak~~---ad~vl~~ 768 (817)
|+--..+++.++...+.++||||..+ |+.+-+.||+ +|.+. ....+..... .|+++.+
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 44445677777777889999999976 9999999999 66663 2122222322 3888764
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.41 E-value=0.0038 Score=58.94 Aligned_cols=112 Identities=10% Similarity=0.098 Sum_probs=75.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++-|++.++++.|++.|+++.++|+... +....+..|+...-.. .+.++ .....+..|
T Consensus 91 ~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~----i~~~~----------------~~~~~KP~~ 148 (221)
T d1o08a_ 91 DVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDA----IADPA----------------EVAASKPAP 148 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSE----ECCTT----------------TSSSCTTST
T ss_pred cccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccc----ccccc----------------cccccccCh
Confidence 4678999999999999999999999754 5667788888542111 11111 001112334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEeCCCccHHHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg~~~~~~ak~~ad~vl~~ 768 (817)
+-=..+++.++...+.++||||..+|+.+-+.||+ .|+++ .+ .....++.++.+
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~~ 203 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVPD 203 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEESS
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC-Ch--hhcccccEEcCC
Confidence 44456777777778899999999999999999998 45555 32 223345655543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.15 E-value=0.0038 Score=55.73 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=56.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHh-Hhhcc----CCceEEE
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQK-NYLRQ----DGGLLFS 707 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~v~~ 707 (817)
+-|++.++++.|+++|++++++|...... ...++..++..+.... ..+.. .....+|
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq~~ia------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~ 92 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQDGLG------------------TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLIC 92 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEECTTTT------------------STTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ECccHHHHHHHHHHcCCceeeecccccch------------------hHHHHHHHhhhhhhhhhhhccccccccceeeec
Confidence 46899999999999999999999753110 0011112222211110 00000 0111222
Q ss_pred -----------ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 708 -----------RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 708 -----------r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
...|.-=.++++.++-..+.++||||...|+.|-+.||+--
T Consensus 93 ~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~ 144 (161)
T d2fpwa1 93 PHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGING 144 (161)
T ss_dssp CCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred cccccccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeE
Confidence 22344445566667777789999999999999999999874
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=95.04 E-value=0.13 Score=43.82 Aligned_cols=106 Identities=11% Similarity=0.201 Sum_probs=68.9
Q ss_pred CChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHH
Q 003468 463 GMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENL 542 (817)
Q Consensus 463 ~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i 542 (817)
.||...|++.+|+..+...... .........+|....+...+.+. ...+..|++..+
T Consensus 30 eHPlakAIv~~Ak~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~g~~~~-----g~~v~~G~~~~~ 86 (136)
T d2a29a1 30 ETPEGRSIVILAKQRFNLRERD------------------VQSLHATFVPFTAQSRMSGINID-----NRMIRKGSVDAI 86 (136)
T ss_dssp CSHHHHHHHHHHHHHHCCCCCC------------------TTTTTCEEEEEETTTTEEEEEET-----TEEEEEECHHHH
T ss_pred CchHHHHHHHHHHHhcCCCccc------------------cccccccccccccccceEEEEEC-----CEEEEecHHHHH
Confidence 5899999999998776432110 01122345677766665555443 356778998776
Q ss_pred HhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeE
Q 003468 543 LERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLV 622 (817)
Q Consensus 543 l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~ 622 (817)
.+..... |. .++ ..+.+.++++..+|..++.+|. |-.
T Consensus 87 ~~~~~~~----g~--~~~----~~~~~~~~~~~~~G~Tvv~Va~---------------------------------d~~ 123 (136)
T d2a29a1 87 RRHVEAN----GG--HFP----TDVDQKVDQVARQGATPLVVVE---------------------------------GSR 123 (136)
T ss_dssp HHHHHHH----TC--CCC----HHHHHHHHHHHHTTSEEEEEEE---------------------------------TTE
T ss_pred HHHHHHc----CC--CCc----HHHHHHHHHHHHCCCeEEEEEE---------------------------------CCE
Confidence 5543211 00 112 3466778899999999998884 336
Q ss_pred EEEEeccCCCCc
Q 003468 623 FVGMVGLRDPPR 634 (817)
Q Consensus 623 ~lG~~~~~d~~r 634 (817)
++|++++.|+++
T Consensus 124 ~~G~i~l~D~iK 135 (136)
T d2a29a1 124 VLGVIALKDIVK 135 (136)
T ss_dssp EEEEEEEEESSC
T ss_pred EEEEEEEEeecC
Confidence 999999999986
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.43 E-value=0.015 Score=54.58 Aligned_cols=104 Identities=12% Similarity=0.039 Sum_probs=69.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCH----hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNK----NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+.+++.+.++.|+++|+++.++|+... ..........|+.+.- ..++..++. -...
T Consensus 98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f----d~i~~s~~~----------------~~~K 157 (222)
T d1cr6a1 98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF----DFLIESCQV----------------GMIK 157 (222)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC----SEEEEHHHH----------------SCCT
T ss_pred CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh----ceeeehhhc----------------cCCC
Confidence 579999999999999999999996432 2334444555553211 011111110 0012
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEeCCCccHH
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAMGIAGTEV 757 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg~~~~~~ 757 (817)
..|+--...++.++-..+.++||||..+|+.+-+.||+ +|-+. ++.+.
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~ 206 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASA 206 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-CcchH
Confidence 34566677888888888999999999999999999998 45444 44443
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.28 E-value=0.0046 Score=58.13 Aligned_cols=99 Identities=11% Similarity=0.015 Sum_probs=63.8
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHH----HHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAI----CREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~i----a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+.+++.++++.|++.|++++++|.......... -...++...- ..++...+. -...
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f----d~i~~s~~~----------------~~~K 159 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF----DFLIESCQV----------------GMVK 159 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS----SEEEEHHHH----------------TCCT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc----cEEEecccc----------------ccch
Confidence 579999999999999999999997654433222 2222321110 001111100 0012
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEeC
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAMG 751 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg 751 (817)
..|+--..+++.++...+.+++|||...|+.+-+.||+ +|.+.
T Consensus 160 P~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 160 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred hHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 23444466788888777889999999999999999999 56554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.91 E-value=0.18 Score=46.74 Aligned_cols=123 Identities=9% Similarity=0.148 Sum_probs=78.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.+++.+.+++|+ .+..++|+.....+..+.+.+|+...... ....+++.. . -.+...|+
T Consensus 86 ~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---~~~~~~~~~-------------~-~~~KP~~~ 145 (222)
T d2fdra1 86 IIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAP---HIYSAKDLG-------------A-DRVKPKPD 145 (222)
T ss_dssp BCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTT---CEEEHHHHC-------------T-TCCTTSSH
T ss_pred hhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccce---eeccccccc-------------c-cccccCHH
Confidence 4667777776664 56679999999999999999999642110 011111000 0 00112233
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCcc-------H-HHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGT-------E-VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~-------~-~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.=....+.++-..+.+++|||+.+|+.+-+.||+- |++. .+. + ....-||+++.+ +..+..++
T Consensus 146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll 217 (222)
T d2fdra1 146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 217 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred HHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEECC--HHHHHHHH
Confidence 34667777887788999999999999999999974 3333 221 1 223349999976 66666665
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=93.26 E-value=0.12 Score=48.78 Aligned_cols=94 Identities=11% Similarity=0.143 Sum_probs=66.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.+++.+++++|+ ++.+.++|..+...+....+..|+...-. .++..++. -..+..|
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd----~v~~s~~~----------------~~~KP~p 150 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD----AVISVDAK----------------RVFKPHP 150 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEGGGG----------------TCCTTSH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccc----cccccccc----------------cccCccH
Confidence 45678889998885 67889999999998888888888753211 11111110 0012234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
+-=..+++.++-..+.+++|||+.+|+.+-+.||+-
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 444667888888888999999999999999999975
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.73 E-value=0.25 Score=45.20 Aligned_cols=146 Identities=17% Similarity=0.193 Sum_probs=84.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCC----ccccccccChhHHHHH---H------------H
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQSITGKEFMDI---H------------N 693 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~----~~~~~~~~~~~~~~~~---~------------~ 693 (817)
+-|++.++++.+++. ..++++|-.-.+-..++++.+|+...- -.+....+..++-+.+ . +
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 358899999999887 667777777777788999999995210 0111111211111111 0 0
Q ss_pred H-hHhhccC-CceEEEe---cCcccHHHHHHHHhcC--CCEEEEEcCCccCHHHhhhCCc--eEEeCCCccHHHHhhcCE
Q 003468 694 Q-KNYLRQD-GGLLFSR---AEPRHKQEIVRLLKED--GEVVAMTGDGVNDAPALKLADI--GVAMGIAGTEVAKEASDM 764 (817)
Q Consensus 694 ~-~~~~~~~-~~~v~~r---~~p~~K~~iv~~l~~~--~~~v~~~GDg~ND~~~l~~A~v--giamg~~~~~~ak~~ad~ 764 (817)
. ...+..- ...++.. +-...|.++++..-.. -...+++||+..|..||+.|.= |+|+.-||.+-+...||+
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~V 240 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHADV 240 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCSE
T ss_pred HHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccccce
Confidence 0 0000000 0000000 0123455554433211 1234899999999999998732 455554788999999999
Q ss_pred EeccCCccHHHHHHH
Q 003468 765 VLADDNFGTIVAAVG 779 (817)
Q Consensus 765 vl~~~~~~~i~~~i~ 779 (817)
.+.+.+...+...+.
T Consensus 241 aiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 241 VIISPTAMSEAKVIE 255 (308)
T ss_dssp EEECSSTHHHHHHHH
T ss_pred EEeccchhHHHHHHH
Confidence 999888777776654
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=88.46 E-value=0.043 Score=49.63 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=62.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh-CCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI-GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.+++.+.+..++..|+++.++|+-....+....... |+... ...++..++. -.....
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~----fd~v~~s~~~----------------~~~Kp~ 143 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA----ADHIYLSQDL----------------GMRKPE 143 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH----CSEEEEHHHH----------------TCCTTC
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhh----ccceeecccc----------------cccccc
Confidence 35789999999999999999999986554433211111 11100 0000000000 001123
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEeC
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAMG 751 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg 751 (817)
|+-=..+++.++-..+.+++|||..+|+.+-+.||+ +|.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 144 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred hHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 444456677777777899999999999999999998 56665
|