Citrus Sinensis ID: 003494

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-----
Protein Sequence
MSGKGGGGGVGKGNNGISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKRKESKDTTDSRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISSSSQPSSGFQSSWLGVPGQVSMADIVKMGRPHNKAPPHKNVNNHHVLAPPAAVSHQELHSSQGHSKVSEFNSEPEVATSQHVSPNDEWPSIEHPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDRTDQQIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNMSSYQPHRHAFEHDEAHDGTSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQASSQMQNLAPFSSMMALRGASISTAQPTQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQTGMSLEHQQQNPRDATLGGSQAQPSKQTQQLWQNSY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccEEEccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccEEEEccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccHHHcccccccc
Coil and Loop (DISEMBL)
msgkgggggvgkgnngissipagSRKIVQSLKEIVNCPESEIYAMLKEcnmdpneavnrllsqdpfhevkskrdkrkeskdttdsrsrgasntsnrggrggtdrygvrsgaayftsnesgtlqskpaykkengthgyagssssaagvvannmnqrppfysddmptenktlevvsgdgissssqpssgfqsswlgvpgqvSMADIvkmgrphnkapphknvnnhhvlappaavshqelhssqghskvsefnsepevatsqhvspndewpsiehppamssvlegsaqsdlytkpahselytnpsnlsvdrtDQQIEAQLdeveeeedgpheipktnhvgsapvssrnmqednsggsslfennlynnmssyqphrhafehdeahdgtsvSAKLQQLnlqnddreapveedspsviipnhlqvhssdcshlsfgsfgtgidsafsgpfasrplknnleersetadapsighsdarnpeyygdehlrstsdanianrpnvtagdydspavsqpsevlKQESVEALQEnqysfpssapgynyenaQQLNSAFAHQQAssqmqnlapfssmmalrgasistaqptqqtmpgasvatgpalpphlavhpysqptlplghfanmigypflpqsytympsgfqqafagnstYHQSLAAAvlpqyknsvsvsslpqsaavasgygfgnstsipggnfplntptapagttmgyddvlgsqykdnnhlislqqndnsamwvhgpgsrtmsavpastyysfqgqnqqpggfrqgqqpsqhfgalgypnfyhsqtgmslehqqqnprdatlggsqaqpskqtqQLWQNSY
Flexible Loop (DISEMBL)
msgkgggggvgkgnngissipagSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRllsqdpfhevkskrdkrkeskdttdsrsrgasntsnrggrggtdrygVRSGAAyftsnesgtlqsKPAYKKENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISSSSQPSSGFQSSWLGVPGQVSMADIVKMGRPHNKAPPHKNVNNHHVLAPPAAVSHQELHSSQGHSKVSEFNSEPEVATSQHVSPNDEWPSIEHPPAMSSVLEGSAQSDLYTKPAHSELytnpsnlsvdrTDQQIEAQLDEVEeeedgpheipktnhvgsapvssrNMQEDNSGGSSLFENNLYNNMSSYQPHRHAFEHDEAHDGTSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRPLKNNLEERsetadapsighsdarNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQASSQMQNLAPFSSMMALRGASISTAQPTQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQTGMSLEHQQQNPRDAtlggsqaqpskqtqqlwqnsy
Low Complexity Region (SEG)
MSgkgggggvgkgnngISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVkskrdkrkeskdttdsRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENGTHGYagssssaagvvaNNMNQRPPFYSDDMPTENKTLEVVsgdgissssqpssgfqssWLGVPGQVSMADIVKMGRPHNKAPPHKNVNNHHVLAPPAAVSHQELHSSQGHSKVSEFNSEPEVATSQHVSPNDEWPSIEHPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDRTDQQIEAQLDeveeeeDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNMSSYQPHRHAFEHDEAHDGTSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQASSQMQNLAPFSSMMALRGASISTAQPTQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYsfqgqnqqpggfrqgqqpsqHFGALGYPNFYHSQTGMSLEHQQQNPRDATLGGSQAQPSKQTQQLWQNSY
Disordered region (IsUnstruct)
**************************IVQSLKEIVNCPESEIYAMLKECN**************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************IPNHLQVHSSDCSHLSFGSFGTGI****************************************************************************************************************************************************************LAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKN***************GYGF***********************MGYDDVLGSQYKDNNHLIS********MWV****************************************ALGYPNFY***************************************
Disordered Region (DISOPRED)
************************RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLL**************************************************************************************************************************************************************************************************************************************************************************************************************************************************************IIPNHLQVHSSDCSHLS***************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
**********GKGNNGISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPF**********************************GTDRYGVRSGAAYFTSNESGTLQSKPAYKKENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVV****************SSWLGVPGQVSMADIVKMGRPHNKAPPHKNVNNHHVLAPPA************************************WPSIEHPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDRTDQQIEAQLD**********EIPKTNHVGS**************GSSLFENNLYNNMSSYQPHRHAFEH*********SAKLQQLNLQ***********SPSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRPLKNNL***********IGHSDARNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSA*********MQNLAPFSSMMALRGASI***************ATGPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQTGM*********************************
Disordered Region (DISPRO)
********************PAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKR**********************************************************************************************************************************************************************************************************************************************************************************************************************************************SPSVIIPNHLQVHSSDCSHLSFGSF*********************************************************************************************************N****N***********MQ******S************************ATGPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQTGMS********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSGKGGGGGVGKGNNGISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKRKESKDTTDSRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISSSSQPSSGFQSSWLGVPGQVSMADIVKMGRPHNKAPPHKNVNNHHVLAPPAAVSHQELHSSQGHSKVSEFNSEPEVATSQHVSPNDEWPSIEHPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSxxxxxxxxxxxxxxxxxxxxxPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNMSSYQPHRHAFEHDEAHDGTSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQASSQMQNLAPFSSMMALRGASISTAQPTQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQTGMSLEHQQQNPRDATLGGSQAQPSKQTQQLWQNSY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	815
224116450	911	predicted protein [Populus trichocarpa]	0.966	0.864	0.629	0.0
255557423	849	conserved hypothetical protein [Ricinus	0.966	0.928	0.642	0.0
359483606	866	PREDICTED: uncharacterized protein LOC10	0.942	0.886	0.617	0.0
297740637	799	unnamed protein product [Vitis vinifera]	0.883	0.901	0.596	0.0
356528381	837	PREDICTED: uncharacterized protein LOC10	0.942	0.917	0.564	0.0
356511015	846	PREDICTED: uncharacterized protein LOC10	0.937	0.903	0.577	0.0
449433553	845	PREDICTED: uncharacterized protein LOC10	0.943	0.910	0.546	0.0
449505951	844	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.942	0.909	0.540	0.0
356558027	839	PREDICTED: uncharacterized protein LOC10	0.925	0.898	0.546	0.0
357519233	865	hypothetical protein MTR_8g088190 [Medic	0.954	0.899	0.527	0.0

>gi|224116450|ref|XP_002317304.1| predicted protein [Populus trichocarpa] gi|222860369|gb|EEE97916.1| predicted protein [Populus trichocarpa]

 Score = 1050 bits (2716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/897 (62%), Positives = 653/897 (72%), Gaps = 109/897 (12%)

Query: 17  ISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKR 76
           IS IPA SRK+VQSLKEIVNCPE EIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKR+K+
Sbjct: 26  ISGIPAASRKMVQSLKEIVNCPEPEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKREKK 85

Query: 77  KESKDTTDSRSRGASNTSNRGGRGGTDRYGVRSG---AAYFTSN---------------- 117
           KE+KD+TD RSRGASN SNRGGRGG DRYG R G   +AYF SN                
Sbjct: 86  KENKDSTDFRSRGASNISNRGGRGGADRYG-RGGPGRSAYFNSNVNHLFSVQLMWTITNN 144

Query: 118 ---ESGTLQSKPAYKKENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVS 174
              ES T  SKPAYKKENGT+ Y     SA+G+  NN+N +PP +SD +  ENK   + +
Sbjct: 145 FSPESSTFHSKPAYKKENGTNAYIDPFPSASGIAGNNINWQPPSHSDSVAAENKMSTIGA 204

Query: 175 GDGISSSSQPSSGFQSSWLGVPGQVSMADIVKMGRPHNKAP---PHKNVNNHHVLAPPAA 231
           GDG+SSS QPS  +QS+W+GVPGQVSMADIVKMGRP NKA    PH++VN+H   A   A
Sbjct: 205 GDGVSSSPQPSPVYQSAWMGVPGQVSMADIVKMGRPQNKASVILPHQSVNHHRAAASLLA 264

Query: 232 VSHQELHSSQGH-SKVSEFNSEPEVATSQHVSPNDEWPSIEHPPAMSSVLEGSAQSDLYT 290
            SH + HSS+ + SKV E  +EPE+ATSQH   NDEWPSIE P A       +  S +  
Sbjct: 265 ASHNDFHSSENYASKVVEITAEPEMATSQHNHSNDEWPSIEQPTA-------AITSSVRD 317

Query: 291 KPAHSELYTNPSNLSVDRTDQQIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDN 350
            PA SELY + SNL +DR  Q +++QLD+ +  ED   E    NHVG A VS+RN QED 
Sbjct: 318 VPADSELYGDLSNLPLDRGSQHVKSQLDD-QTAEDAHVESFDGNHVGPASVSTRNTQEDG 376

Query: 351 SGGSSLFENNLYNNMSSYQPHRHAFEHDE----------------AHDGT-SVSAKLQQL 393
           SGGSSLF+N++Y N++SYQ    AFE++E                A DGT SV+A LQ L
Sbjct: 377 SGGSSLFDNDVYENINSYQSDSLAFENNEGAIDNLSELIVSHVISAEDGTSSVAANLQHL 436

Query: 394 NLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRPLKNNL 453
           +LQNDD+    EE++PSVIIPNHLQVH+ +CSHLSFGSFG+G++SAFSG FAS P+  +L
Sbjct: 437 SLQNDDQGVQPEENNPSVIIPNHLQVHAQECSHLSFGSFGSGMNSAFSGQFASMPINKSL 496

Query: 454 EERSETADAPSIGHSDARNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLK 513
           EE SE  DA S GHS+ARNPEYYGDEHLR+  D ++ +R  V+A +YDS +V Q SE LK
Sbjct: 497 EETSEVVDALSTGHSEARNPEYYGDEHLRNAVDESLVHRAGVSATNYDSSSVPQ-SETLK 555

Query: 514 QESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQASSQMQNLAPFSSMMA------- 566
           +E+ EA Q NQY+FPSS PGY+YEN QQLN AF + Q S+QMQN+APFSS+MA       
Sbjct: 556 EETSEATQGNQYAFPSSTPGYSYENTQQLNVAFNNPQTSTQMQNIAPFSSVMAYTNSMPS 615

Query: 567 ------------------------------------LRGASI-----------STAQPTQ 579
                                               + G SI           ST QPT 
Sbjct: 616 ALLASTVQAGRETDLPYSPFPVTQSLPTKYSNAATSISGPSISMSEALRAGGVSTPQPTP 675

Query: 580 QTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGN 639
           QT+PGA++ATGPALP HLAVHPY QPTLPLGHFANMI YPF+ QSYTYMPS FQQ FAGN
Sbjct: 676 QTLPGANIATGPALPQHLAVHPYQQPTLPLGHFANMISYPFMAQSYTYMPSAFQQTFAGN 735

Query: 640 STYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTM 699
           ++YHQSL AAVLPQYKNSVSVSSLPQSAAVASGYGFG+STSIP GNFPLN PTAPAGTT+
Sbjct: 736 NSYHQSL-AAVLPQYKNSVSVSSLPQSAAVASGYGFGSSTSIPAGNFPLNAPTAPAGTTI 794

Query: 700 GYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQ 759
           GYDD+LGSQYKD +HL+SLQQN+NSAMW+HGPGSRTMSAVPASTYYSFQGQNQQPGGFRQ
Sbjct: 795 GYDDILGSQYKDASHLMSLQQNENSAMWLHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQ 854

Query: 760 GQQPSQHFGALGYPNFYHSQTGMSLEH-QQQNPRDATLGGSQAQPSKQTQQLWQNSY 815
           GQQPSQHFGALGYPN+YHSQTGMSLEH QQQN RD +LGGSQ QPSKQ QQLWQNSY
Sbjct: 855 GQQPSQHFGALGYPNYYHSQTGMSLEHQQQQNSRDGSLGGSQGQPSKQAQQLWQNSY 911

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557423|ref|XP_002519742.1| conserved hypothetical protein [Ricinus communis] gi|223541159|gb|EEF42715.1| conserved hypothetical protein [Ricinus communis]

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/876 (64%), Positives = 650/876 (74%), Gaps = 88/876 (10%)

Query: 1   MSGKGGGGGVGKGNNGISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRL 60
           MSGK      GKGN+GIS IPAGSRK+VQSLKEIVNCPE EIYAMLK+CNMDPNEAVNRL
Sbjct: 1   MSGKAAINN-GKGNSGISGIPAGSRKMVQSLKEIVNCPEPEIYAMLKDCNMDPNEAVNRL 59

Query: 61  LSQDPFHEVKSKRDKRKESKDTTDSRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESG 120
           LSQDPFHEVKSKR+K+KE+KDTT+ RSR A+N ++R GR G DRYG R G++ F+SN+ G
Sbjct: 60  LSQDPFHEVKSKREKKKETKDTTEPRSRVANNATHRAGRVGADRYG-RGGSSQFSSNDPG 118

Query: 121 TLQSKPAYKKENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISS 180
               KPAYKKENGT+  +  SSSA  +   N+N+RP   SD +  ENK L V + DG+S 
Sbjct: 119 VSHGKPAYKKENGTNA-SAGSSSAPSMAGTNINRRPILNSDLVAAENKLLTVGASDGVSL 177

Query: 181 SSQPSSGFQSSWLGVPGQVSMADIVKMGRPHNKA-PPHKNVNNHHVLAPPAAVSHQELHS 239
           SSQP++GFQS W+GVPGQVSMADIVKMGRPHNKA PPH +VN+ H  APP    + +LH 
Sbjct: 178 SSQPTAGFQSPWVGVPGQVSMADIVKMGRPHNKAMPPHHSVNHRHPAAPPLTALNHDLHL 237

Query: 240 SQGHS-KVSEFNSEPEVATSQHVSPNDEWPSIEHPPAMSS--VLEGSAQSDLYTKPAHSE 296
           S+ +S KVSE N+EPEV  SQ V  NDEWPSIE P A+S   VLE          P+ SE
Sbjct: 238 SENYSAKVSEVNAEPEVTASQLVHANDEWPSIE-PSAVSMPPVLEA---------PSDSE 287

Query: 297 LYTNPSNLSVDRTDQQIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSL 356
           L T+PSNL +DR +Q ++++LD+ +  ED   E    NHVG   VSSR ++ED++ GSS+
Sbjct: 288 LCTDPSNLPLDRVNQHMQSELDDTQSTEDDHIETFNVNHVGPTSVSSRTIKEDDAVGSSM 347

Query: 357 FENNLYNNMSSYQPHRHAFEHDEAHDG-TSVSAKLQQLNLQNDDREAPVEEDSPSVIIPN 415
           FE+NLY NM SYQ HRHAFEH EA DG +SV+A LQ L+LQ +D+ A  +ED+PSVIIPN
Sbjct: 348 FESNLYGNMGSYQTHRHAFEH-EAEDGASSVAANLQHLSLQGEDQAASSDEDNPSVIIPN 406

Query: 416 HLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEY 475
           HLQVH+ DCSHLSFGSFG+GI SAF G FASRPLKNNLEE SE  DA S  HSDARN EY
Sbjct: 407 HLQVHAQDCSHLSFGSFGSGIGSAFPGAFASRPLKNNLEETSEVVDASSAVHSDARNTEY 466

Query: 476 YGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYN 535
           YGDEHLR+ +D N+ +R  V+ G+YDSPA  QP EVLK+E+ EA Q NQY+FPSSA GY 
Sbjct: 467 YGDEHLRNAADDNLIHRAGVSPGNYDSPAGPQP-EVLKEETPEAAQGNQYAFPSSASGYT 525

Query: 536 YENAQQLNSAFAHQQASSQMQNLAPFSSMM------------------------------ 565
           +EN+QQLN+AF++ Q SSQMQN+ PFS++M                              
Sbjct: 526 FENSQQLNAAFSNPQTSSQMQNMTPFSNVMQAYTNSLPSTLLTSTVQQGREPDLPYSPFP 585

Query: 566 --------------ALRGASI-----------STAQPTQQTMPGASVATGPALPPHLAVH 600
                         ++ G SI           ST QPT QT+PG SVATGPAL  HLAVH
Sbjct: 586 VTQSMPTKYSNTASSISGPSISMPEALRAPSISTPQPTPQTLPGGSVATGPALQQHLAVH 645

Query: 601 PYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSV 660
           PYSQPTLPLG FANMIGYPFLPQSYTYMPS FQQ FAGNSTYHQSL AAVLPQYKNSVSV
Sbjct: 646 PYSQPTLPLGPFANMIGYPFLPQSYTYMPSAFQQTFAGNSTYHQSL-AAVLPQYKNSVSV 704

Query: 661 SSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQ 720
           +SLPQSAAVAS YGFG+STS+P G           GTT+GYDD L SQYKD NHLISLQQ
Sbjct: 705 TSLPQSAAVASAYGFGSSTSVPAG-----------GTTIGYDDGLSSQYKDGNHLISLQQ 753

Query: 721 NDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPS-QHFGALGYPNFYHSQ 779
           NDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQP G+RQGQQ S QHFGALGYPN+YHSQ
Sbjct: 754 NDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPAGYRQGQQLSQQHFGALGYPNYYHSQ 813

Query: 780 TGMSLEHQQQNPRDATLGGSQAQPSKQTQQLWQNSY 815
           TG+SLE QQQN R+ +LGGSQ QPSKQTQQLWQNSY
Sbjct: 814 TGISLELQQQNSREGSLGGSQGQPSKQTQQLWQNSY 849

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483606|ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245196 [Vitis vinifera]

 Score =  990 bits (2560), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/883 (61%), Positives = 630/883 (71%), Gaps = 115/883 (13%)

Query: 11  GKGNNGISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVK 70
           GKG+ GIS+IPA SRK+VQSL+E+VNC E EIYAMLKECNMDPN+AV+RLLS DPFHEVK
Sbjct: 21  GKGSGGISTIPAASRKMVQSLREVVNCSEQEIYAMLKECNMDPNDAVHRLLSLDPFHEVK 80

Query: 71  SKRDKRKESKDTTD----------SRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESG 120
           SK+          D          SRSR  ++TS RG RGGTDR+  RS +  F+S    
Sbjct: 81  SKK----------DKRKESKDTTESRSRSVNSTSTRGSRGGTDRFAGRSSSNQFSST--- 127

Query: 121 TLQSKPAYKKENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISS 180
                 AYKKENGT+ Y  ++  A GV  N+MN RPP  S+ + TE K L + + DGI+S
Sbjct: 128 ------AYKKENGTNAY--TTYPAVGVAGNSMNWRPPTTSETVATE-KILTIGTSDGITS 178

Query: 181 SSQPSSGFQSSWLGVPGQVSMADIVKMGRPHNKAPP-----HKNVNNHHVLAPPAAVSHQ 235
           SSQPSSGFQS+WLGVPG VSMADIVK GRPH KA       + NV NH VLAP +   H 
Sbjct: 179 SSQPSSGFQSAWLGVPGHVSMADIVKKGRPHGKASATPNTSYPNVTNHQVLAPSSTALHH 238

Query: 236 ELHSSQGHSKVSEFNSEPEVATSQHVSPNDEWPSIEHPP--AMSSVLEGSAQSDLYTKPA 293
           +LHS    SKVS+ N EP +A  Q+V PNDEWP +E  P  ++SS+LE SA         
Sbjct: 239 DLHSYDHVSKVSDMNPEPGIAAKQNVPPNDEWPLVEQLPSASVSSLLEPSAD-------- 290

Query: 294 HSELYTNPSNLSVDRTDQQIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDNSGG 353
            S+ +T+ SNL +D ++Q I  QLDE ++E+D   E    +HV SA VSSR +QEDNSGG
Sbjct: 291 -SQPFTDQSNLPLD-SNQHINPQLDEAQDEDDSSDENLNEDHVISASVSSRKIQEDNSGG 348

Query: 354 SSLFENNLYNNMSSYQPHRHAFEHDEAHD----GTSVSAKLQQLNLQNDDREAPVEEDSP 409
           +SLF+N+LY NM SYQPHRHAFEH EA D     +SV+  +Q+L LQ D R  P EED  
Sbjct: 349 ASLFDNDLYENMGSYQPHRHAFEHHEAEDVGVPVSSVATNMQELTLQEDPRPKP-EEDDH 407

Query: 410 SVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSD 469
           SVIIPNHLQV  +D SHLSFGSF +GI S+FSGPFASR +KN+LE+ S  AD P +GHS+
Sbjct: 408 SVIIPNHLQVQHADFSHLSFGSFRSGISSSFSGPFASRSVKNSLEDASTVADTP-VGHSE 466

Query: 470 ARNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPS 529
            RNP+YY DEHLR+TSD N+A+R    AG YDSP+ SQP E LKQE+ EA Q NQY+FPS
Sbjct: 467 TRNPDYYEDEHLRTTSDGNMAHRTAAIAGSYDSPSASQP-EALKQEASEAAQGNQYNFPS 525

Query: 530 SAPGYNYENAQQLNSAFAHQQASSQMQNLAPFSSMMA----------------------- 566
           SA GY +E +QQLN AF H Q SSQMQNLAPFSS+MA                       
Sbjct: 526 SASGYTFETSQQLNPAFPHSQTSSQMQNLAPFSSVMAYTNSLPSNLLASTVPPARESDLP 585

Query: 567 --------------------LRGASI-----------STAQPTQQTMPGASVATGPALPP 595
                               + G++I           ST QPT QT+P  SVATGPALP 
Sbjct: 586 YSPFPITQSMSTKYSNAVSSISGSTISVTEALKTGSFSTPQPTPQTLPSTSVATGPALPQ 645

Query: 596 HL-AVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQY 654
           HL  VHPYSQP LPLGHFANMIGYPFLPQSYTYMPS +QQAFAGNSTYHQSL AAVLPQY
Sbjct: 646 HLPPVHPYSQPGLPLGHFANMIGYPFLPQSYTYMPSAYQQAFAGNSTYHQSL-AAVLPQY 704

Query: 655 KNSVSVSSLPQSAAVASGYG-FGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNN 713
           KNSVSVSSLPQSAA+ASGYG FG+STSIP GNF LN PTA AGTT+GYDDV+ SQYKD N
Sbjct: 705 KNSVSVSSLPQSAAIASGYGAFGSSTSIP-GNFSLNPPTAAAGTTIGYDDVINSQYKDGN 763

Query: 714 HLISL-QQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPSQHFGALGY 772
           HLISL QQN+NSAMWVHGPGSRTMSAVPA+TYYSFQGQNQQPGGFRQGQQPSQHFGALGY
Sbjct: 764 HLISLQQQNENSAMWVHGPGSRTMSAVPANTYYSFQGQNQQPGGFRQGQQPSQHFGALGY 823

Query: 773 PNFYHSQTGMSLEHQQQNPRDATLGGSQAQPSKQTQQLWQNSY 815
           PNFYHSQ G+SLEHQQQNPRD +L GSQ Q SKQ+QQ+WQN+Y
Sbjct: 824 PNFYHSQAGISLEHQQQNPRDGSLSGSQGQASKQSQQIWQNNY 866

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740637|emb|CBI30819.3| unnamed protein product [Vitis vinifera]

 Score =  940 bits (2429), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/869 (59%), Positives = 598/869 (68%), Gaps = 149/869 (17%)

Query: 11  GKGNNGISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVK 70
           GKG+ GIS+IPA SRK+VQSL+E+VNC E EIYAMLKECNMDPN+AV+RLLS DPFHEVK
Sbjct: 16  GKGSGGISTIPAASRKMVQSLREVVNCSEQEIYAMLKECNMDPNDAVHRLLSLDPFHEVK 75

Query: 71  SKRDKRKESKDTTDSRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKK 130
           SK+DKRKESKDTT+SRSR  ++TS RG RGGTDR+  RS +  F+S +SGT   K AYKK
Sbjct: 76  SKKDKRKESKDTTESRSRSVNSTSTRGSRGGTDRFAGRSSSNQFSSTDSGTSHGKSAYKK 135

Query: 131 ENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISSSSQPSSGFQS 190
           ENGT+ Y  ++  A GV  N+MN RPP  S+ + TE K L + + DGI+SSSQPSSGFQS
Sbjct: 136 ENGTNAY--TTYPAVGVAGNSMNWRPPTTSETVATE-KILTIGTSDGITSSSQPSSGFQS 192

Query: 191 SWLGVPGQVSMADIVKMGRPHNKAPPHKNVNNHHVLAPPAAVSHQELHSSQGHSKVSEFN 250
           +WLGVPG VSMADIVK GRPH KA    N +  +V                        N
Sbjct: 193 AWLGVPGHVSMADIVKKGRPHGKASATPNTSYPNVT-----------------------N 229

Query: 251 SEPEVATSQHVSPNDEWPSIEHPP--AMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDR 308
            +P +A  Q+V PNDEWP +E  P  ++SS+LE SA          S+ +T+ SNL +D 
Sbjct: 230 HQPGIAAKQNVPPNDEWPLVEQLPSASVSSLLEPSAD---------SQPFTDQSNLPLD- 279

Query: 309 TDQQIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNMSSY 368
                                                        +SLF+N+LY NM SY
Sbjct: 280 --------------------------------------------SASLFDNDLYENMGSY 295

Query: 369 QPHRHAFEHDEAHD----GTSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDC 424
           QPHRHAFEH EA D     +SV+  +Q+L LQ D R  P EED  SVIIPNHLQV  +D 
Sbjct: 296 QPHRHAFEHHEAEDVGVPVSSVATNMQELTLQEDPRPKP-EEDDHSVIIPNHLQVQHADF 354

Query: 425 SHLSFGSFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRST 484
           SHLSFGSF +GI S+FSGPFASR +KN+LE+ S  AD P +GHS+ RNP+YY DEHLR+T
Sbjct: 355 SHLSFGSFRSGISSSFSGPFASRSVKNSLEDASTVADTP-VGHSETRNPDYYEDEHLRTT 413

Query: 485 SDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNS 544
           SD N+A+R    AG YDSP+ SQP E LKQE+ EA Q NQY+FPSSA GY +E +QQLN 
Sbjct: 414 SDGNMAHRTAAIAGSYDSPSASQP-EALKQEASEAAQGNQYNFPSSASGYTFETSQQLNP 472

Query: 545 AFAHQQASSQMQNLAPFSSMM--------------------------------------- 565
           AF H Q SSQMQNLAPFSS+M                                       
Sbjct: 473 AFPHSQTSSQMQNLAPFSSVMQAYTNSLPSNLLASTVPPARESDLPYSPFPITQSMSTKY 532

Query: 566 -----ALRGASI-----------STAQPTQQTMPGASVATGPALPPHL-AVHPYSQPTLP 608
                ++ G++I           ST QPT QT+P  SVATGPALP HL  VHPYSQP LP
Sbjct: 533 SNAVSSISGSTISVTEALKTGSFSTPQPTPQTLPSTSVATGPALPQHLPPVHPYSQPGLP 592

Query: 609 LGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAA 668
           LGHFANMIGYPFLPQSYTYMPS +QQAFAGNSTYHQSL AAVLPQYKNSVSVSSLPQSAA
Sbjct: 593 LGHFANMIGYPFLPQSYTYMPSAYQQAFAGNSTYHQSL-AAVLPQYKNSVSVSSLPQSAA 651

Query: 669 VASGYG-FGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISL-QQNDNSAM 726
           +ASGYG FG+STSIP GNF LN PTA AGTT+GYDDV+ SQYKD NHLISL QQN+NSAM
Sbjct: 652 IASGYGAFGSSTSIP-GNFSLNPPTAAAGTTIGYDDVINSQYKDGNHLISLQQQNENSAM 710

Query: 727 WVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQTGMSLEH 786
           WVHGPGSRTMSAVPA+TYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQ G+SLEH
Sbjct: 711 WVHGPGSRTMSAVPANTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQAGISLEH 770

Query: 787 QQQNPRDATLGGSQAQPSKQTQQLWQNSY 815
           QQQNPRD +L GSQ Q SKQ+QQ+WQN+Y
Sbjct: 771 QQQNPRDGSLSGSQGQASKQSQQIWQNNY 799

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528381|ref|XP_003532782.1| PREDICTED: uncharacterized protein LOC100803908 [Glycine max]

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/884 (56%), Positives = 607/884 (68%), Gaps = 116/884 (13%)

Query: 1   MSGKGGGGGVGKGNNGISSIPAGSRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNR 59
           MSGKGGG       +  + IP  SRK+VQSL+EIV N PE EIYA LK+CNMDPNEAV+R
Sbjct: 1   MSGKGGG-------SQKAGIPPASRKMVQSLREIVSNIPEHEIYATLKDCNMDPNEAVSR 53

Query: 60  LLSQDPFHEVKSKRDKRKESKDTTDSRSRGASNTSNRGG---RGGTDRYGVRSGAAYFTS 116
           LLSQDPFHEVKSKR+K+KE KDTTD+RSRG SN S+RGG   R G+DRY  R        
Sbjct: 54  LLSQDPFHEVKSKREKKKEGKDTTDTRSRGISNASSRGGGGARVGSDRYVGRG------- 106

Query: 117 NESGTLQSKPAYKKENGTHGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGD 176
            +SG LQ KP +KKENGT  Y G ++ A+  + NN+N++ P YSD          V   D
Sbjct: 107 -DSGLLQGKPVFKKENGTPAYGGYTAPASSSLDNNVNRQLPSYSDS---------VRVCD 156

Query: 177 GISSSSQPSSGFQSSWLGVPGQVSMADIVKMGRPHNKAP-PHKNVN---NHHVLAPPAAV 232
           G+SSS     G QS W   PGQVSMADIV+MGRP  KA  P+ +++   + +  A P+A 
Sbjct: 157 GLSSSQH--GGLQSPWAANPGQVSMADIVRMGRPQAKASMPNSSLHSGSHQNDFALPSA- 213

Query: 233 SHQELHSSQGH-SKVSEFNSEPEVATSQHVSPNDEWPSIEHPPAMSS--VLEGSAQSDLY 289
           S   LHS Q H SK+SE N++   A   +V   DEWPSIEH PA+S   V++G   S   
Sbjct: 214 SQNNLHSVQVHASKLSETNNDHGFAIDSNVEQTDEWPSIEHQPAVSVSLVVDGHPTS--- 270

Query: 290 TKPAHSELYTNPSNLSVDRTDQQIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQED 349
                 E +TN SN      +QQ++  ++E   E+D P E P    VGSA    +++ E+
Sbjct: 271 ------EYHTNSSN--SGEANQQLKTHVNEFVAEDD-PVENPDI--VGSA----KSISEE 315

Query: 350 NSGGSSLFENNLYNNMSSYQPHRHAFEHDEAHDG-TSVSAKLQQLNLQNDDREAPVEEDS 408
           N   +S+F+ +LY +++SYQPHRH FE++EA DG +SV+  L+QLNL ++D+    EE++
Sbjct: 316 NPESTSVFDGSLYKDINSYQPHRHPFENNEAEDGVSSVATNLEQLNLHSNDQGTEPEEEN 375

Query: 409 PSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSG--PFASRPLKNNLEERSETADAPSIG 466
            SV+IPNHLQ+HS++C +LSFGSFG+  D++ SG  P+ASRPLK+NLE+ S   D  +IG
Sbjct: 376 SSVVIPNHLQLHSAECLNLSFGSFGSANDASLSGSGPYASRPLKSNLEDTSGANDVSTIG 435

Query: 467 HSDARNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYS 526
            SD RNP+YY DEHL +TSD N+A+   V AG Y+  ++SQ SE LK E  E  QENQYS
Sbjct: 436 SSDVRNPDYYADEHLTTTSDGNLAHITGVDAGTYEHSSISQ-SEALKSEPPETAQENQYS 494

Query: 527 FPSSAPGYNYENAQQLNSAFAHQQASSQMQNLA--------------------------- 559
           FPSS+  + YENAQQ +  + H Q SSQ+QNL+                           
Sbjct: 495 FPSSSHEFTYENAQQPDVTYPHSQTSSQIQNLSPFSSVMQAYTNSLPSALLASTVQTARE 554

Query: 560 -----PFSSMM----------------------ALRGASISTAQPTQQTMPGASVATGPA 592
                PF +                        ALR  +IST QP  Q +PGA+VATGPA
Sbjct: 555 DIPYSPFPATQSMPSKYSNIASSIGGPSITMSEALRANNISTPQPNPQALPGANVATGPA 614

Query: 593 LPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLP 652
           LP HLAVHPYSQPTLPLGHFANMIGY FLPQSYTYMPS FQQAF GNSTYHQSLAA +LP
Sbjct: 615 LPQHLAVHPYSQPTLPLGHFANMIGYQFLPQSYTYMPSAFQQAFPGNSTYHQSLAA-MLP 673

Query: 653 QYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDN 712
           QYKNS+SVSSLPQSAAVASGYGFG+STSIPGGN+PLN P AP  TT+GYDDV+ SQYKDN
Sbjct: 674 QYKNSISVSSLPQSAAVASGYGFGSSTSIPGGNYPLNPPAAPTSTTIGYDDVINSQYKDN 733

Query: 713 NHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPS-QHFGALG 771
           NH+ISLQQN+NS MWVHGP SRTMSAVPA+TYYSFQGQNQQPGGFRQ QQPS QHFG+LG
Sbjct: 734 NHMISLQQNENSPMWVHGPSSRTMSAVPANTYYSFQGQNQQPGGFRQNQQPSQQHFGSLG 793

Query: 772 YPNFYHSQTGMSLEHQQQNPRDATLGGSQAQPSKQTQQLWQNSY 815
           YPNFYHSQTG+SLEHQQQNPR+A+L GSQ QP KQ+ Q+WQNSY
Sbjct: 794 YPNFYHSQTGISLEHQQQNPREASLAGSQTQPPKQSPQIWQNSY 837

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511015|ref|XP_003524227.1| PREDICTED: uncharacterized protein LOC100776017 [Glycine max]

 Score =  855 bits (2210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/866 (57%), Positives = 602/866 (69%), Gaps = 102/866 (11%)

Query: 20  IPAGSRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKRKE 78
           IP  SRK+VQSLKEIV N PE EIYA LK+CNMDPNEAV+RLLSQD FHEVKSKR+K+KE
Sbjct: 13  IPPASRKMVQSLKEIVSNIPEHEIYATLKDCNMDPNEAVSRLLSQDTFHEVKSKREKKKE 72

Query: 79  SKDTTDSRSRGASNTSNRGG--RGGTDRYGVRSGAAYFTS-NESGTLQSKPAYKKENGTH 135
            KDTTDSRSR  SNTS+RGG  R   DRY  R GA  F+S  +SG LQ KP  KKENGT 
Sbjct: 73  GKDTTDSRSRVVSNTSSRGGGARVSADRYVGRGGATQFSSGGDSGLLQGKPVLKKENGTP 132

Query: 136 GYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISSSSQPSSGFQSSWLGV 195
            Y G ++ A+  + NN+N++ P YSD          V   DG+SSS     G QS W+  
Sbjct: 133 AYGGLTAPASSALDNNVNRQLPSYSDS---------VRVCDGLSSSQY--GGMQSPWVAN 181

Query: 196 PGQVSMADIVKMGRPHNKAPPHKNV----NNHHVLAPPAAVSHQELHSSQGH-SKVSEFN 250
           PGQVSMADIV+MGRP  KA  H +     ++ +V APP A SH  LHS QGH SKVSE N
Sbjct: 182 PGQVSMADIVRMGRPQAKASMHNSSLHSGSHQNVFAPPEA-SHNNLHSLQGHASKVSETN 240

Query: 251 SEPEVATSQHVSPNDEWPSIEHPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDRTD 310
           ++   A + +V  NDEWP IEH PA+S        S +      SE +TN SN      +
Sbjct: 241 NDRGFAINSNVEQNDEWPLIEHQPAVSV-------SSVVDDHPTSEYHTNSSN--SGEAN 291

Query: 311 QQIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNMSSYQP 370
           QQ++  ++E   E+D P E P  ++VGSA +S     E+N   +S+F+ + Y +++SYQ 
Sbjct: 292 QQLKTHVNEFVAEDD-PVENP--DNVGSASIS-----EENPESTSVFDGSTYKDINSYQS 343

Query: 371 HRHAFEHDEAHDG-TSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSF 429
           HRH FE +EA  G +SV+A L+QLNL ++D+    EE++ SV+IPNHLQ+HS++C +LSF
Sbjct: 344 HRHPFETNEAEGGVSSVAANLEQLNLHSNDQGTEQEEENSSVVIPNHLQLHSAECLNLSF 403

Query: 430 GSFGTGIDSAF--SGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRSTSDA 487
           GSFG+  D++   SGP+ASRPLK+NLE+ S   D  +IG SD RNP+YYGDEHL +TSD 
Sbjct: 404 GSFGSANDASLSGSGPYASRPLKSNLEDTSGANDVSTIGSSDVRNPDYYGDEHLTTTSDG 463

Query: 488 NIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFA 547
           N+A+   V AG Y+  ++SQ SE LK E  E  QENQYSFPSS   + YENAQQ +  + 
Sbjct: 464 NVAHITGVDAGTYEHSSISQ-SEALKSEPPETAQENQYSFPSSHE-FTYENAQQPDVTYP 521

Query: 548 HQQASSQMQNLAPFSSMM---------ALRGASISTA----------------------- 575
           H Q SSQ+QNL+PFSS+M         AL  +++ TA                       
Sbjct: 522 HSQTSSQIQNLSPFSSVMQAYTNSLPSALLASTVQTAREDIPYSPFPATQSMPAKYSNIA 581

Query: 576 ----------------------QPTQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFA 613
                                 QP  Q +PGA+VATGPALP HLAVHPYSQPTLPLGHFA
Sbjct: 582 SSIGGPTINMSEALRANNISTPQPNPQALPGANVATGPALPQHLAVHPYSQPTLPLGHFA 641

Query: 614 NMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQS---AAVA 670
           NMI YPFLPQSYTYMPS FQQAF GNSTYHQSL AA+LPQYKNS+SVSSLPQS   AAVA
Sbjct: 642 NMISYPFLPQSYTYMPSAFQQAFPGNSTYHQSL-AAMLPQYKNSISVSSLPQSAAAAAVA 700

Query: 671 SGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHG 730
           SGYGFG+STSIPGGN+PLN P AP  TT+GYDDV+ SQ+K+NNH+ISLQQN+NS MWVHG
Sbjct: 701 SGYGFGSSTSIPGGNYPLNPPAAPTSTTIGYDDVINSQFKENNHIISLQQNENSPMWVHG 760

Query: 731 PGSRTMSAVPASTYYSFQGQNQQPGGFRQGQQPS-QHFGALGYPNFYHSQTGMSLEHQQQ 789
           P SRTMSAVP STYYSFQGQNQQPGGFRQ QQPS QHFG+LGYPNFYHSQTG+SLEHQQQ
Sbjct: 761 PSSRTMSAVPPSTYYSFQGQNQQPGGFRQSQQPSQQHFGSLGYPNFYHSQTGISLEHQQQ 820

Query: 790 NPRDATLGGSQAQPSKQTQQLWQNSY 815
           NPR+A+L GSQ+QP KQ+QQ+WQNSY
Sbjct: 821 NPREASLAGSQSQPPKQSQQIWQNSY 846

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433553|ref|XP_004134562.1| PREDICTED: uncharacterized protein LOC101211388 [Cucumis sativus]

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/856 (54%), Positives = 591/856 (69%), Gaps = 87/856 (10%)

Query: 20  IPAGSRKIVQSLKEIVN-CPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKRKE 78
           IP   RK+VQSLKEIVN C + EIYA L+ECNMDP+EAVNRLL+QDPFHEVKSKR+K+KE
Sbjct: 17  IPPEWRKMVQSLKEIVNNCTDQEIYATLRECNMDPDEAVNRLLTQDPFHEVKSKREKKKE 76

Query: 79  SKDTTDSRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENGTHGYA 138
           +KD  DSRSRG+S  S+R  +GGTDRY  RS +  F S+++G   SKP YKKENG   +A
Sbjct: 77  NKDPIDSRSRGSSIPSSRTSKGGTDRYAGRSSSIQFGSSDTGLSSSKPVYKKENGASDHA 136

Query: 139 GSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISSSSQPSSGFQSSWLGVPGQ 198
           GSSS++     ++  Q P  +S+++ TENK   + +GDG  SSSQ S GFQS+WLG  GQ
Sbjct: 137 GSSSASGQSGNHSFYQFPS-HSNNVATENKLSGLGAGDGAISSSQTSFGFQSAWLGAQGQ 195

Query: 199 VSMADIVKMGRPHNKAPPHKNV-----NNHHVLAPPAAVSHQELHSSQGHSKVSEFNSEP 253
           VSMADIVKMG+P +K+   +N      ++H+ +   +  +    HS+   S V+E +S P
Sbjct: 196 VSMADIVKMGKPQSKSSSMQNTYLQGSSSHNSVPFQSTPTLPNFHSAPRASTVTEAHSGP 255

Query: 254 EVATSQHVSPNDEWPSIE--HPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDRTDQ 311
            +  SQ  S NDEWPSIE   P  +SS +E          PA  EL+++P+NLS+D  +Q
Sbjct: 256 GI-MSQQASLNDEWPSIEPPQPVGISSSVE---------SPAVLELHSSPANLSLDSPNQ 305

Query: 312 QIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNMSSYQPH 371
            +    D+ +  E    +    NH   A +   N+ EDNSG +S+ ++NLY++M+SY PH
Sbjct: 306 HVHQ--DKAQVVESSSVDTIDVNHAAHASILGSNIPEDNSGSASVSDSNLYDDMNSYLPH 363

Query: 372 RHAFEHDEAHDG-TSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFG 430
           RH  EH+EA DG +S+SA  QQL+LQ +D+++P EED+ SV+IP+HLQ+H+ DC HLSFG
Sbjct: 364 RHVIEHNEAEDGVSSMSANFQQLSLQKEDQDSPPEEDNTSVVIPHHLQLHTPDCFHLSFG 423

Query: 431 SFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRSTSDANIA 490
           SFG+G ++ FSG  A     +N+EE S  AD  S+ HS+ARN EYY D+   + SD N+ 
Sbjct: 424 SFGSGTNANFSGSGAFP--NSNVEESSAPADVSSVAHSEARNSEYYEDD--GANSDGNLI 479

Query: 491 NRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQ 550
           +R + + G Y++P     +EV KQES E  Q N Y+FPSS+PG++YE+ Q     F   Q
Sbjct: 480 HRTSASGGYYETPTTQ--AEV-KQESSENAQANLYAFPSSSPGFSYESNQPSEIPFI--Q 534

Query: 551 ASSQMQNL------------------------------APF-------------SSMM-- 565
            SS+MQNL                              +PF             SS+   
Sbjct: 535 NSSEMQNLERAMLAYTNTLSNNMLLASTSQTVREDPQYSPFPDTQSVPKYSNAASSITGP 594

Query: 566 ------ALRGASISTAQPTQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANMIGYP 619
                  LR +SI+T+QPT    P ++VA GPA+P HLAVHPYSQPTLPLGHFANMIGYP
Sbjct: 595 SMSMPEVLRTSSITTSQPT----PQSNVAAGPAVPQHLAVHPYSQPTLPLGHFANMIGYP 650

Query: 620 FLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNST 679
           FLPQSYTYMPSGFQQAFAGNSTYHQ+L AAVLPQYKNS+SVSSLPQSAA+ASGYGFG+ST
Sbjct: 651 FLPQSYTYMPSGFQQAFAGNSTYHQAL-AAVLPQYKNSISVSSLPQSAAIASGYGFGSST 709

Query: 680 SIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAV 739
           SIPGGNFPLN PTAPAG+++GY+D + SQYKD+NHL+SLQQNDN AMW+HGPGSRTMSAV
Sbjct: 710 SIPGGNFPLNPPTAPAGSSIGYEDAISSQYKDSNHLLSLQQNDNPAMWIHGPGSRTMSAV 769

Query: 740 PASTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQTGMSLEHQQQNPRDATLGGS 799
           PAS YY  QGQNQQ  GFRQ QQPSQ +GALGYPNFYHSQ G+SL+ QQQ  RDA+LGGS
Sbjct: 770 PASAYYGLQGQNQQSSGFRQAQQPSQQYGALGYPNFYHSQAGISLDGQQQTLRDASLGGS 829

Query: 800 QAQPSKQTQQLWQNSY 815
           Q Q  KQ+QQ+WQNSY
Sbjct: 830 QGQQPKQSQQIWQNSY 845

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449505951|ref|XP_004162612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101224560 [Cucumis sativus]

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/856 (54%), Positives = 586/856 (68%), Gaps = 88/856 (10%)

Query: 20  IPAGSRKIVQSLKEIVN-CPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKRKE 78
           IP   RK+VQSLKEIVN C + EIYA L+ECNMDP+EAVNRLL+QDPFHEVKSKR+K+KE
Sbjct: 17  IPPEWRKMVQSLKEIVNNCTDQEIYATLRECNMDPDEAVNRLLTQDPFHEVKSKREKKKE 76

Query: 79  SKDTTDSRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENGTHGYA 138
           +KD  DSRSRG+S  S+R  +GGTDRY  RS +  F S+++G   SKP YKK+  +    
Sbjct: 77  NKDPIDSRSRGSSIPSSRTSKGGTDRYAGRSSSIQFGSSDTGLSSSKPVYKKKXASDHAG 136

Query: 139 GSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISSSSQPSSGFQSSWLGVPGQ 198
            SS+S      N+   + P +S+++ TENK   + +GDG  SSSQ S GFQS+WLG  GQ
Sbjct: 137 SSSASGQ--SGNHSFYQFPSHSNNVATENKLSGLGAGDGAISSSQTSFGFQSAWLGAQGQ 194

Query: 199 VSMADIVKMGRPHNKAPPHKNV-----NNHHVLAPPAAVSHQELHSSQGHSKVSEFNSEP 253
           VSMADIVKMG+P +K+   +N      ++H+ +   +  +    HS+   S V+E +S P
Sbjct: 195 VSMADIVKMGKPQSKSSSMQNTYLQGSSSHNSVPFQSTPTLPNFHSAPRASTVTEAHSGP 254

Query: 254 EVATSQHVSPNDEWPSIE--HPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDRTDQ 311
            +  SQ  S NDEWPSIE   P  +SS +E          PA  EL+++P+NLS+D  +Q
Sbjct: 255 GI-MSQQASLNDEWPSIEPPQPVGISSSVE---------SPAVLELHSSPANLSLDSPNQ 304

Query: 312 QIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNMSSYQPH 371
            +    D+ +  E    +    NH   A +   N+ EDNSG +S+ ++NLY++M+SY PH
Sbjct: 305 HVHQ--DKAQVVESSSVDTIDVNHAAHASILGSNIPEDNSGSASVSDSNLYDDMNSYLPH 362

Query: 372 RHAFEHDEAHDG-TSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFG 430
           RH  EH+EA DG +S+SA  QQL+LQ +D+++P EED+ SV+IP+HLQ+H+ DC HLSFG
Sbjct: 363 RHVIEHNEAEDGVSSMSANFQQLSLQKEDQDSPPEEDNTSVVIPHHLQLHTPDCFHLSFG 422

Query: 431 SFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRSTSDANIA 490
           SFG+G ++ FSG  A     +N+EE S  AD  S+ HS+ARN EYY D+   + SD N+ 
Sbjct: 423 SFGSGTNANFSGSGAFP--NSNVEESSAPADVSSVAHSEARNSEYYEDD--GANSDGNLI 478

Query: 491 NRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQ 550
           +R + + G Y++P     +EV KQES E  Q N Y+FPSS+PG++YE+ Q     F   Q
Sbjct: 479 HRTSASGGYYETPTTQ--AEV-KQESSENAQANLYAFPSSSPGFSYESNQPSEIPFI--Q 533

Query: 551 ASSQMQNL------------------------------APF-------------SSMM-- 565
            SS+MQNL                              +PF             SS+   
Sbjct: 534 NSSEMQNLERAMLAYTNTLSNNMLLASTSQTVREDPQYSPFPDTQSVPKYSNAASSITGP 593

Query: 566 ------ALRGASISTAQPTQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANMIGYP 619
                  LR +SI+T+QPT    P ++VA GPA+P HLAVHPYSQPTLPLGHFANMIGYP
Sbjct: 594 SMSMPEVLRTSSITTSQPT----PQSNVAAGPAVPQHLAVHPYSQPTLPLGHFANMIGYP 649

Query: 620 FLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNST 679
           FLPQSYTYMPSGFQQAFAGNSTYHQ+L AAVLPQYKNS+SVSSLPQSAA+ASGYGFG+ST
Sbjct: 650 FLPQSYTYMPSGFQQAFAGNSTYHQAL-AAVLPQYKNSISVSSLPQSAAIASGYGFGSST 708

Query: 680 SIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAV 739
           SIPGGNFPLN PTAPAG+++GY+D + SQYKD+NHL+SLQQNDN AMW+HGPGSRTMSAV
Sbjct: 709 SIPGGNFPLNPPTAPAGSSIGYEDAISSQYKDSNHLLSLQQNDNPAMWIHGPGSRTMSAV 768

Query: 740 PASTYYSFQGQNQQPGGFRQGQQPSQHFGALGYPNFYHSQTGMSLEHQQQNPRDATLGGS 799
           PAS YY  QGQNQQ  GFRQ QQPSQ +GALGYPNFYHSQ G+SL+ QQQ  RDA+LGGS
Sbjct: 769 PASAYYGLQGQNQQSSGFRQAQQPSQQYGALGYPNFYHSQAGISLDGQQQTLRDASLGGS 828

Query: 800 QAQPSKQTQQLWQNSY 815
           Q Q  KQ+QQ+WQNSY
Sbjct: 829 QGQQPKQSQQIWQNSY 844

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558027|ref|XP_003547310.1| PREDICTED: uncharacterized protein LOC100782498 [Glycine max]

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/865 (54%), Positives = 569/865 (65%), Gaps = 111/865 (12%)

Query: 18  SSIPAGSRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKR 76
           ++IPA SRK+VQSLKEIV N P+ EIYA LK+CNMDPNEAV+RLLSQDPFHEVKSKR+K+
Sbjct: 19  ATIPASSRKMVQSLKEIVSNFPDHEIYATLKDCNMDPNEAVSRLLSQDPFHEVKSKREKK 78

Query: 77  KESKDTTDSRSRGA--SNTSNRGG-RGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENG 133
           KE KD TDSRSRG+  +NTS+RGG R GTDRYG R GA  F S++ G LQ KP YKKENG
Sbjct: 79  KEIKDPTDSRSRGSGTNNTSSRGGGRAGTDRYGGRGGANQFGSSDYG-LQGKPVYKKENG 137

Query: 134 THGYAGSSSSAAGVVANNMNQRPPFYSDDMPTENKTLEVVSGDGISSSSQPSSGFQSSWL 193
              + GS+SSA  V+ NN N R P YSD + TE KT     GDG SSSSQ  +G QS+W 
Sbjct: 138 APTFGGSTSSAPSVLGNNTNTRLPSYSDSVVTE-KTYAFGIGDGPSSSSQ-RAGLQSAWT 195

Query: 194 GVPGQVSMADIVKMGRPHNKAPPH----KNVNNHHVLAPPAAVSHQELHSSQGH-SKVSE 248
           G  GQVSMADIVKMGRP  +   H    ++ N+ +V  PPAA S   LHS QG+ SKVSE
Sbjct: 196 GNTGQVSMADIVKMGRPQARPSMHNSSIQSCNHQNVFMPPAA-SDNNLHSLQGYASKVSE 254

Query: 249 FNSEPEVATSQHVSPNDEWPSIEHPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDR 308
            N+      S +V  NDEWP IE+   +    +  A        A+SE Y N S+ +   
Sbjct: 255 TNTNQGHVISDNVPQNDEWPCIENQHDVIVYADVDAH-------ANSEYYANSSSFA--E 305

Query: 309 TDQQIEAQLDEVEEEEDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNMSSY 368
            D Q +  LDE    EDG   +   ++V SA +S+++  EDN+G                
Sbjct: 306 ADWQQKTHLDE-HVAEDG--SVENADNVESASISAKSTSEDNTGAED------------- 349

Query: 369 QPHRHAFEHDEAHDGTSVSAKLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLS 428
                        D +SV+A ++QLN+Q DD+    E ++PSV+IPNHL +H+ +C +LS
Sbjct: 350 -------------DVSSVAANIEQLNIQRDDQGTEQEHENPSVVIPNHLLLHTPECMNLS 396

Query: 429 FGSFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHL----RST 484
           FGSFG+G   + SG F SRPLK++LE+ S   D  +I +SD RNP+YYGDEHL     +T
Sbjct: 397 FGSFGSGNPLSGSGSFTSRPLKSSLEDTSGATDVSTIENSDTRNPDYYGDEHLSTTATTT 456

Query: 485 SDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNS 544
           SD N+     V+AG Y+  ++SQ  E LK +  E  QENQYSF S + G+NYENAQQ   
Sbjct: 457 SDGNLVQGTGVSAGTYEHTSISQ-QEALKPDPPEIAQENQYSFTSQSHGFNYENAQQPEV 515

Query: 545 AFAHQQASSQMQNLAPFSSMM--------------------------------------- 565
            F   Q SSQMQNLAPFS +M                                       
Sbjct: 516 TFPLSQTSSQMQNLAPFSGVMVHTNSLPSALLSLPVQTAREDIPYLPFPATQSMPTKYSN 575

Query: 566 ----------ALRGASISTAQPTQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANM 615
                     ALR + I+T QP  QT+ GA VATGPALP HLAVHPYSQPTLPLGHFANM
Sbjct: 576 IGSSTITVSEALRASGITTPQPNAQTLSGAGVATGPALPQHLAVHPYSQPTLPLGHFANM 635

Query: 616 IGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGF 675
           I YPFLPQSYTYMPS FQQ FAGN+TY QSL AAVLPQYKN+VS SSLPQSAA+  GYGF
Sbjct: 636 ISYPFLPQSYTYMPSAFQQTFAGNNTYPQSL-AAVLPQYKNNVSASSLPQSAAIPPGYGF 694

Query: 676 GNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRT 735
           G+STSIPGGNF LN P AP GTT+GY+D++ SQ+KDNNH++SLQQN+NS MWV GPGSRT
Sbjct: 695 GSSTSIPGGNFSLNPPAAPTGTTIGYEDLINSQFKDNNHMMSLQQNENSPMWVQGPGSRT 754

Query: 736 MSAVPASTYYSFQGQNQQ-----PGGFRQGQQPSQHFGALGYPNFYHSQTGMSLEHQQQN 790
           MSAVP S YY+ QGQNQQ         +Q QQPSQHFG LGYPNFY SQTG+SLEHQ QN
Sbjct: 755 MSAVPPSNYYNLQGQNQQQPGGFRQRQQQQQQPSQHFGPLGYPNFYQSQTGISLEHQPQN 814

Query: 791 PRDATLGGSQAQPSKQTQQLWQNSY 815
           PR+A+LGG Q+QPSKQ+QQ+WQNSY
Sbjct: 815 PREASLGGPQSQPSKQSQQIWQNSY 839

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357519233|ref|XP_003629905.1| hypothetical protein MTR_8g088190 [Medicago truncatula] gi|355523927|gb|AET04381.1| hypothetical protein MTR_8g088190 [Medicago truncatula]

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/902 (52%), Positives = 593/902 (65%), Gaps = 124/902 (13%)

Query: 1   MSGKGGGGGVGKG-NNGISSIPAGSRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVN 58
           MSGK GG    KG ++ +S IPA SRK+VQSLKEIV N P++EIYA LK+CNMDPNEAV+
Sbjct: 1   MSGKVGGQ---KGTSSSLSGIPAASRKMVQSLKEIVSNIPDNEIYATLKDCNMDPNEAVS 57

Query: 59  RLLSQDPFHEVKSKRDKRKESKDTTDSRSRGAS----NTSNRGGRGGTDRYG------VR 108
           RLLSQDPFHEVKSKR+K+KE KDTT+ RSRG++    +    GGR G+DRY         
Sbjct: 58  RLLSQDPFHEVKSKREKKKEGKDTTEPRSRGSNYNIPSRGGGGGRTGSDRYAGRGGGGGG 117

Query: 109 SGAAYFTSNESGTLQSKPAYKKENGTHGYA-GSSSSAAGVVANNMNQRPPFYSDDMPTEN 167
           + +  F++N+ G  QSKP +KKENGT  Y   S+S A+ V+ NN+N++PP +SD +    
Sbjct: 118 ASSNQFSNNDYGVPQSKPVFKKENGTPAYGSSSTSYASSVMDNNVNRQPPSWSDSVGVH- 176

Query: 168 KTLEVVSGDGISSSSQPSSGFQSSWLGVPGQVSMADIVKMGRPHNKAP-PHKNV---NNH 223
                   DG+SSSS    G QS+W   PGQVSMADIVKMGRP  KA  P  +V   N+ 
Sbjct: 177 --------DGLSSSSH-HGGLQSAWSASPGQVSMADIVKMGRPQAKASVPKSSVHSGNHQ 227

Query: 224 HVLAPPAAVSHQELHSSQGHSKVSEFNSEPEVATSQH---VSPN----DEWPSIEHPPAM 276
           + ++ PAA SH  L+ ++  ++      EP V  S     + PN    DEWPS+EHPP +
Sbjct: 228 NAVSTPAA-SHHNLNVTEATNEWPSI--EPNVQQSDEWPSIDPNVQQSDEWPSVEHPPIV 284

Query: 277 SSVLEGSAQSDLYTKPAHSELYTNPSNLSVDRTDQQIEAQLDEVEEEEDGPHEIPKTNHV 336
           +          +   P +SE YTN SN      ++Q++   +E    ED P E    + V
Sbjct: 285 A----------VDAHP-NSEYYTNTSNFG--EANRQLQNHGNEF-VAEDSPVEDENPDDV 330

Query: 337 GSAPVSSRNMQEDNSGGSSLFENNLYNNMSSYQPHRHAFEHDEAHDG-TSVSAKLQQLNL 395
           GSA + ++ + +DN G +S +++NLY +++SYQ HRH F+ +EA +G +SV+  L+QLNL
Sbjct: 331 GSASIPAKIISDDNPGTASGYDDNLYKDINSYQSHRHPFDDNEAENGVSSVATNLEQLNL 390

Query: 396 QNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGP--FASRPLKNNL 453
             D++    EED+  V+IPNHLQ+H+ +C  LSFGSFG   ++  SG    +SRPL++NL
Sbjct: 391 HTDEQGIEPEEDNSDVLIPNHLQLHTPECFSLSFGSFGPKQNATVSGAGTHSSRPLQSNL 450

Query: 454 EERSETADAPSIGHSDARNPEYYGDEHLRSTSDA-NIANRPNVTAGDYDSPAVSQPSEVL 512
           EE S   D  +IG SD +NP+YYGDEH+ +TSD  NI++   V A  Y+  ++SQP E L
Sbjct: 451 EETSGATDVSAIGSSDVKNPDYYGDEHIATTSDGNNISHITGVDARTYEHSSISQP-EAL 509

Query: 513 KQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQASSQMQNLAPFSSMM------- 565
           K E  E  QENQYSFPSS+  + YENAQQ   A+ H Q SSQ+QNL+PFSS+M       
Sbjct: 510 KSEPSETAQENQYSFPSSSHEFTYENAQQPEVAYPHSQTSSQIQNLSPFSSVMAYTNSLP 569

Query: 566 ----------------------------------------------ALRGASIST--AQP 577
                                                         ALR  +IST  AQP
Sbjct: 570 NALLASTVQTPREDIPYSPFPVTQAMPAKYSNMASSIGGSTINMSEALRANNISTPQAQP 629

Query: 578 TQQTMPGASVATGPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFA 637
            QQ++PGA VATGP+LP HLAVHPYSQ    LG FANMI YPF+PQSYTYMPS FQQAFA
Sbjct: 630 NQQSLPGAGVATGPSLPQHLAVHPYSQ----LGPFANMISYPFMPQSYTYMPSAFQQAFA 685

Query: 638 GNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGT 697
           GNSTYHQSL AAVLPQYKNS+SVSSLPQSAA+ SGYGFG+STSIPGGN+PLN   AP  T
Sbjct: 686 GNSTYHQSL-AAVLPQYKNSISVSSLPQSAAIPSGYGFGSSTSIPGGNYPLNPSAAPTST 744

Query: 698 TMGYDDVLGSQYKDNNHLISLQQNDNSAMWVHGPGSRTMSAVPASTYYSFQGQN-QQPGG 756
           T+GYDDV+ SQYKDNNH+ISLQQN+N+ MWV GPGSRTMS VP STYYSFQGQN QQPG 
Sbjct: 745 TIGYDDVINSQYKDNNHMISLQQNENNPMWVQGPGSRTMS-VPPSTYYSFQGQNQQQPGA 803

Query: 757 FRQGQQPS-QHFGALGYP-NFYHSQTGMSLEHQQQNPRDATLGG-SQAQPSKQTQQLWQN 813
           FRQ QQPS QHF   GYP NFYHSQ+G+SLEHQQQNPRDA+L G     P +  QQLWQN
Sbjct: 804 FRQSQQPSQQHFAPHGYPNNFYHSQSGISLEHQQQNPRDASLAGSQSQPPKQSQQQLWQN 863

Query: 814 SY 815
           SY
Sbjct: 864 SY 865

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	815
TAIR|locus:2013713	831	AT1G29370 "AT1G29370" [Arabido	0.853	0.837	0.397	2.8e-114
TAIR|locus:2013693	831	AT1G29350 "AT1G29350" [Arabido	0.856	0.839	0.392	2.2e-112
TAIR|locus:2117671	758	AT4G18150 "AT4G18150" [Arabido	0.619	0.666	0.328	8.4e-80
TAIR|locus:2170433	607	AT5G46380 "AT5G46380" [Arabido	0.373	0.500	0.302	1e-30
TAIR|locus:2091087	841	AT3G07660 "AT3G07660" [Arabido	0.132	0.128	0.406	2.3e-26
TAIR|locus:2088202	848	AT3G13990 "AT3G13990" [Arabido	0.056	0.054	0.553	2.1e-15
TAIR|locus:2012015	575	AT1G55820 "AT1G55820" [Arabido	0.352	0.499	0.227	3.6e-06
TAIR|locus:2090019	567	GIP1 "GBF-interacting protein	0.131	0.188	0.295	4.5e-05
DICTYBASE|DDB_G0270760	991	DDB_G0270760 "unknown" [Dictyo	0.440	0.362	0.240	0.00054
FB|FBgn0085362	578	Vml "Vitelline membrane-like"	0.317	0.448	0.265	0.00078

TAIR|locus:2013713 AT1G29370 "AT1G29370" [Arabidopsis thaliana (taxid:3702)]

 Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
 Identities = 305/768 (39%), Positives = 412/768 (53%)

Query:    17 ISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVXXXXXXX 76
             I  IP+GSRKIVQSL EIVN PE+EIYAMLKECNMDPNE V+RLLSQDPFHEV       
Sbjct:    14 IQDIPSGSRKIVQSLTEIVNSPEAEIYAMLKECNMDPNETVSRLLSQDPFHEVKSKKEKK 73

Query:    77 XXXXXXXXXRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENGTHG 136
                      R RGA+NT NRG RGG+ RY  RSG+ +F+S +SG  Q K   KKE+GT G
Sbjct:    74 KETRDISDSRPRGANNTYNRGARGGSARYAGRSGSTHFSSTDSGNFQGKSTNKKESGTQG 133

Query:   137 YXXXXXXXXXXXXNNMNQRPPFYSDDMPTENKTLEVVXXXXXXXXXXXXXXXXXXWLGVP 196
             Y             N  Q P  +S+ + TENK L  V                  W G P
Sbjct:   134 YTSSWSSASGVA--NTYQTP--HSEPVATENK-LPPVTLGDGISSSQSASGHQTAWFGAP 188

Query:   197 GQVSMADIVKMGRPHNKAPPHKNVNNHHVLAPPAAVSHQELHSSQGHSKVS-EFNS-EPE 254
             GQ SMA++VKMGRP NK    +NVN        + ++H+   S+   + V  E+ S E  
Sbjct:   189 GQRSMAEVVKMGRPQNKTTK-QNVNMG------SEINHEHKVSANHQAPVKDEWPSIEKP 241

Query:   255 VA---TSQHVSPNDEWPSIEHPPAMSSVLEGSAQSDLYTKPAHSELYTNPSNLSVDRTDQ 311
             +A   +S  V+P +    + + PA       S + D Y K     ++   S  S  R   
Sbjct:   242 LAPSTSSLSVAPAES--EVRNGPADFQ----SDRGDQYLKDRLENIHIAESGPSESRKVD 295

Query:   312 QIEA---QLDXXXXXXDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFEN-NLYNNMSS 367
              ++A   Q D      +      +T    S PV     ++D S GS+ F+  + ++   S
Sbjct:   296 HVQADSVQEDESVVSSEIDDNPYQTQ---SHPVEHHKDEDDVSSGSASFQQLDSHDQEVS 352

Query:   368 YQPHRHAF---EHDEAHDGTSVSAKLQQLNLQN-DDREAPVEEDSPSVIIPNHLQVHSSD 423
             ++  R A     H   H  T   A+L   +      R      ++ S + P   Q+  SD
Sbjct:   353 HEKDRPAVVIPNHLLIH--TEECAQLSFGSFGGFGSRPLSNSVEATSDVAP---QIEHSD 407

Query:   424 CSHLSFGSFGTG-IDSAFSGPFASRPLKNNLEERSETA-DAPSIGHSD-ARNPEYYGDEH 480
               +  F  +G   + S  +G     P   N ++  ET  +     +S+ A+  +Y   + 
Sbjct:   408 ARNTEF--YGDEHLGSTTNGNMVHTPATGNYDDSLETRREVLKQENSEGAQEHQYTFTQS 465

Query:   481 LRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVE-ALQENQYSFPSSAPGYNYENA 539
              +  +  N A +  + +  YD+   +  +++   +S+   +Q   +S P++      +NA
Sbjct:   466 EQGYAYEN-AKQQQMNSA-YDASHTNSQNQMHNLDSLSNVMQGYSHSVPNTLLAQTAQNA 523

Query:   540 QQLN---SAFAHQQA-----SSQMQNLAPFSSMM--ALRGASISTAQPTQQTMPGASVAT 589
             ++L+   S F+ QQ+     S+   +L   S  M  ALRG+ I   QPTQQT+PGA++AT
Sbjct:   524 RELDFQYSPFSAQQSMQSRTSNNASSLGGQSISMPEALRGSGIPATQPTQQTLPGANIAT 583

Query:   590 GPALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAA 649
             GPALP  L +H YSQPTLPL H+ANMIGYP +PQ+Y YMPS FQQ FAGNS YHQ LAA 
Sbjct:   584 GPALPQQLPMH-YSQPTLPLTHYANMIGYPLMPQNYPYMPSAFQQTFAGNSAYHQQLAA- 641

Query:   650 VLPQYKNSVSVSSLPQSA-AVASGYGFGNSTSI-PGGNFPLNTPTAPAGTTMGYDDVLGS 707
             +LPQYK +VS  +LPQSA A AS YGFGNST++   GNFPLN  +A  GTT+GYDDVL S
Sbjct:   642 LLPQYKTNVSPGNLPQSATAPASAYGFGNSTNVGSAGNFPLNQQSATTGTTLGYDDVLSS 701

Query:   708 QYKDNNHLISLQQ----------NDNSAMWVHGPGSRTMSAVPASTYY 745
             QYK+N HL++LQQ          N+NSAMW  G GSRTMS VP +TYY
Sbjct:   702 QYKEN-HLLALQQQQQQQQHQQQNENSAMWHQGHGSRTMSGVPTNTYY 748

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2013693 AT1G29350 "AT1G29350" [Arabidopsis thaliana (taxid:3702)]

 Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
 Identities = 301/766 (39%), Positives = 410/766 (53%)

Query:    17 ISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVXXXXXXX 76
             I  IP+GSRKIVQSL EIVN PE+EIYAMLKECNMDPNE V+RLLSQDPFHEV       
Sbjct:    14 IQDIPSGSRKIVQSLTEIVNSPEAEIYAMLKECNMDPNETVSRLLSQDPFHEVKSKKEKK 73

Query:    77 XXXXXXXXXRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENGTHG 136
                      R RGA+NT NRG RGG+ RY  RSG+ +F+S +SG  Q K   KKE+GT G
Sbjct:    74 KETRDISDSRPRGANNTYNRGARGGSARYAGRSGSTHFSSTDSGNFQGKSTNKKESGTQG 133

Query:   137 YXXXXXXXXXXXXNNMNQRPPFYSDDMPTENKTLEVVXXXXXXXXXXXXXXXXXXWLGVP 196
             Y             N  Q P  +S+ +  ENK L  V                  W G P
Sbjct:   134 YTSSWSSASGVA--NTYQTP--HSEPIAMENK-LPPVTLGDGISSSKSASGHQTAWFGAP 188

Query:   197 GQVSMADIVKMGRPHNKAPPHKNVNNHHVLAPPAAVSHQ-ELHSSQGHSKVSEFNS-EPE 254
             GQ SMA++VKMGRP NK    +NVN        + ++H+ E++++Q      E+ S E  
Sbjct:   189 GQRSMAEVVKMGRPQNKTTK-QNVN------VGSEINHEHEVNANQQAPVKDEWPSIEKP 241

Query:   255 VATSQHVSPNDEWPSIEHPPAMSSVLE-GSAQSDLYTKPAHSELYTNPSNLSVDRTDQQI 313
             +A S   S     P+       + + +  S + D Y K     ++   S  S  R    +
Sbjct:   242 LAPS--TSSLSVAPA--ESEVRNGLADFQSDRGDQYLKDRLENIHIAESGPSESRGVDHV 297

Query:   314 EA---QLDXXXXXXDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFEN-NLYNNMSSYQ 369
             +A   Q D      +      +T    S PV     ++D S GS+ F+  + ++   S++
Sbjct:   298 QADSVQEDESVVSSEIDDNPYQTQ---SHPVEHHKDEDDVSSGSASFQQLDSHDQEVSHE 354

Query:   370 PHRHAF---EHDEAHDGTSVSAKLQQLNLQN-DDREAPVEEDSPSVIIPNHLQVHSSDCS 425
               R A     H   H  T   A+L   +      R      ++ S + P   Q+  SD  
Sbjct:   355 EDRPAVVIPNHLLIH--TEECAQLSFGSFGGFGSRPLSNSVEATSDVAP---QIEHSDAR 409

Query:   426 HLSFGSFGTG-IDSAFSGPFASRPLKNNLEERSETA-DAPSIGHSD-ARNPEYYGDEHLR 482
             +  F  +G   + S  +G     P   N ++  ET  +     +S+ A+  +Y   +  +
Sbjct:   410 NTEF--YGDEHLGSTTNGNMVHTPATGNYDDSLETRREVLKQENSEGAQEHQYTFTQSEQ 467

Query:   483 STSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVE-ALQENQYSFPSSAPGYNYENAQQ 541
               +  N A +  + +  YD+   +  +++   +S+   +Q   +S P++      +NA++
Sbjct:   468 GYAYEN-AKQQQMNSA-YDASHTNSQNQMHNLDSLSNVMQGYSHSVPNTLLAQTAQNARE 525

Query:   542 LN---SAFAHQQA-----SSQMQNLAPFSSMM--ALRGASISTAQPTQQTMPGASVATGP 591
             L+   S F+ QQ+     S+   +L   S  M  ALRG+ I   QPTQQT+PGA++ATGP
Sbjct:   526 LDFQYSPFSAQQSMQSRTSNNASSLGGQSISMPEALRGSGIPATQPTQQTLPGANIATGP 585

Query:   592 ALPPHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVL 651
             ALP  L +H YSQPTLPL H+ANMIGYP +PQ+Y YMPS FQQ FAGNS YHQ LAA +L
Sbjct:   586 ALPQQLPMH-YSQPTLPLTHYANMIGYPLMPQNYPYMPSAFQQTFAGNSAYHQQLAA-LL 643

Query:   652 PQYKNSVSVSSLPQSA-AVASGYGFGNSTSI-PGGNFPLNTPTAPAGTTMGYDDVLGSQY 709
             PQYK +VS  +LPQSA A AS YGFGNST++   GNFPLN  +A  GTT+GY+DVL SQY
Sbjct:   644 PQYKTNVSPGNLPQSATAPASAYGFGNSTNVGSAGNFPLNQQSATTGTTLGYEDVLSSQY 703

Query:   710 KDNNHLISLQQ----------NDNSAMWVHGPGSRTMSAVPASTYY 745
             K+N HL++LQQ          N+NSAMW  G GSRTMS VP +TYY
Sbjct:   704 KEN-HLLALQQQQQQQQHQQQNENSAMWHQGHGSRTMSGVPTNTYY 748

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117671 AT4G18150 "AT4G18150" [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 8.4e-80, Sum P(2) = 8.4e-80
 Identities = 193/587 (32%), Positives = 269/587 (45%)

Query:   250 NSEPEVATSQHVSP-NDEWPSIEHPPAM---SSVLEGSAQSDLYTKPAHSELYTNPSNLS 305
             +SE + ++S+  +P  DE PSIE        SSVL+ SA+S +      S+ ++   +L 
Sbjct:   218 SSEAQESSSK--APLKDECPSIEKQDVSYLSSSVLKPSAESKI-----SSDQFSESQHLD 270

Query:   306 VDRTDQQIEAQLDXXXXXXDGPHEIPKTNHVGSAPVSSRNMQEDNSGGSSLFENNLYNNM 365
                 D   +   +        P   P  +H   A VSSRN+ +D S  S + ++   NN 
Sbjct:   271 ETLLD---DIHRETKTYPTGSP---PDVDHNPLASVSSRNLVDDESRDSLVCDDE--NNK 322

Query:   366 SSYQPHRHAFEHDEAHD-GTSVSAKLQQLNLQNDD-REAPVEEDSPSVIIPNHLQVHSSD 423
             +     RH++E ++  D  TSV+   QQL + N++ +EA  +E+  +VIIPNHLQVH+S+
Sbjct:   323 AE----RHSYEENQDEDVSTSVATGFQQLTIYNEEEQEALPKEEKHAVIIPNHLQVHTSE 378

Query:   424 CSHLSFGSFGTGIDSAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRS 483
             C HL FG F +GI S    P A   L +NLEE     D  S  H D     +YG+E    
Sbjct:   379 CLHLMFGCFSSGIGSG--QPSA---LNDNLEEPLVAEDDSSFRHPDTN---FYGEEEAEQ 430

Query:   484 TSDANIANRPNVTA-GDY---DSPAVSQPSEVLKQESVEALQEN--QYSFPSSAPGYNYE 537
               +A    + +      Y   ++     PSE   Q        N  Q  + SS P     
Sbjct:   431 PRNAVTNEQVSYQIDSSYRFENNQLFHPPSETNPQRQNLDTYPNIMQQGYTSSLPNTLLP 490

Query:   538 NA-QQLNSAFAHQQASSQMQNLAPFSSMMALRGASISTAQPTQQTMPGASVATGPALPPH 596
             +  Q    +  H    + + N    S   ALR ASIS   P Q  +P A       L  H
Sbjct:   491 SGIQDGRESNLHYSPFTTLYN-TEISMAEALRAASIS---P-QNAIPSAGQQAA-TLAQH 544

Query:   597 LAVHPYS-QPTLPLGHFANMIGYPFLPQSYT-YMPSGFQQAF-AGNSTYHQSLAAAVLPQ 653
             LA++PYS QP +PLGH+ N+I YPF+ Q Y  +M S FQQ F  GN   HQSL   +L Q
Sbjct:   545 LALNPYSHQPEMPLGHYGNLISYPFMAQCYNPFMLSAFQQVFPTGN---HQSLVD-MLMQ 600

Query:   654 YKNSVSVSSLPQSAAVASGYGFGNSTSIPGGNFPLNTPTAPAGTTMGYDDVLGSQYKDNN 713
             YK   +   +P  +A    YGFG   ++   NFPLN PT+ A +    D +     + N+
Sbjct:   601 YKTQTTAPPVPPPSA----YGFGGG-AVSSNNFPLN-PTSAANSYE--DVLSSQFNESNH 652

Query:   714 HLISLQQ-NDNSAMWVHGPGSRTMSAVPASTYYXX-------------XXXXXXXXXXXX 759
                SLQQ N+ +  W  G  + +   VP S YY                           
Sbjct:   653 LASSLQQQNEKTTAWHQGQQANSR-VVPGSGYYSYPGHQNQQPPGFRQAQQLQHQQQSSQ 711

Query:   760 XXXXXXHFGALGYPNFYHSQTGMSLEH------QQQNPRDATLGGSQ 800
                   H+G  GY + YHSQ  MSLEH      QQQN RDA+    Q
Sbjct:   712 QQQQQQHYGGHGYVSPYHSQAVMSLEHLHHQYQQQQNARDASKQSQQ 758

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2170433 AT5G46380 "AT5G46380" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
 Identities = 106/350 (30%), Positives = 149/350 (42%)

Query:   409 PSVIIPNHLQVHSSDCSHLSFGSFGTG-IDSAFSGPFASRPLKNNLEERSETADAPSIGH 467
             PSV + N  Q +S D  +L FG FG+G +    +    + P     +  ++ AD  S  H
Sbjct:   247 PSVPV-NSDQCNS-DLQNLKFGRFGSGEVHMIMNNQSLALPS----QFLNDPADDLSFRH 300

Query:   468 SDARNPEYYGDEHLRSTSDANIANRPNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSF 527
              + R      DE        N+AN     A + +S A    +     +  E  QENQY+ 
Sbjct:   301 LNLR------DEEEEQQPRMNVANEK--MAYEVNSNAARNYNSSPNCDHTEPTQENQYT- 351

Query:   528 PSSAPGYNYENAQQLNSAFAHQQASSQMQNLAPFSSMM---ALRGASIS---TAQPTQQT 581
              SSA  + + N+Q  N   A  + S QM NL  F   M   A     ++   +A P  Q+
Sbjct:   352 SSSATDFTFYNSQLFNPVMAPAERSLQMPNLNTFPDSMHQQAFTREHVNAWYSASPLNQS 411

Query:   582 MPGASVATGPALPPHLAV--------HPYSQPTLPLGHFANMIGYPF-LP--QSYTY-MP 629
             M  AS + G  LP  +          H Y QP +P  H+ NM+ YP+ LP     TY MP
Sbjct:   412 MYAAS-SLGRRLPVSMTEMNRQAMNHHLYPQPNVPSEHYGNMMNYPYSLPTQNDNTYDMP 470

Query:   630 -SGFQQ-AFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAV----ASGYGFGNSTSIPG 683
              S FQQ     N  YH     A LP +++S      P  AA     +S YG  N  +   
Sbjct:   471 ASAFQQHGGLNNDAYHLRPLVAPLPLHRDSYPCP--PTLAAGPYTRSSAYGSANGPAYDS 528

Query:   684 GNFPLNTPTAPAGTTMGYDDVLGSQYKDNNHLISLQ-QNDNSAMWVHGPG 732
               +     +      + +DD      + +NHL SLQ QN  S+MW   PG
Sbjct:   529 A-YGCGMLSDHNTANLRFDDEDDFHTRFSNHLASLQHQNGTSSMWTP-PG 576

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2091087 AT3G07660 "AT3G07660" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
 Identities = 48/118 (40%), Positives = 60/118 (50%)

Query:    19 SIPAGSRKIVQSLKEIV--NCPESEIYAMLKECNMDPNEAVNRLLSQDPFHEVXXXXXXX 76
             SI A +RK++Q++KE    N  E EI AML ECNMDP+E   RLL QDPFHEV       
Sbjct:     9 SISATTRKMIQNIKETTAGNYSEDEIIAMLHECNMDPDETAQRLLLQDPFHEVKKKRDKR 68

Query:    77 XXXXXXX-XXRSRGASNTSNRGGRGGTDRYGVRSGAAYFTSNESGTLQSKPAYKKENG 133
                        S+  S    RG RGG   +  R       SN+     +K ++KKENG
Sbjct:    69 KENINNKDSAESQWRSGGGGRGSRGGRMNFSSRHA-----SND--VAGAKNSFKKENG 119

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2088202 AT3G13990 "AT3G13990" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
 Identities = 26/47 (55%), Positives = 38/47 (80%)

Query:    24 SRKIVQSLKEIVNC-PESEIYAMLKECNMDPNEAVNRLLSQDPFHEV 69
             ++K++QS+KE+V+   +++IY  LKE NMD NEAV +L+ QDPFHEV
Sbjct:    19 AKKMIQSIKEVVDSHSDADIYTALKEANMDANEAVEKLIHQDPFHEV 65

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2012015 AT1G55820 "AT1G55820" [Arabidopsis thaliana (taxid:3702)]

 Score = 92 (37.4 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
 Identities = 72/317 (22%), Positives = 124/317 (39%)

Query:   331 PKTNHVGSAPVSSRN-MQEDNSGGSSLFENNLYNNMSSYQPHRHAFEHDEAHDGTSVSAK 389
             P TN   +  V +   +    S  S +  +   ++ S     R + + D+A +  + S +
Sbjct:   123 PATNKASNITVPNETKVSGPASIPSEVSNHKAQDDPSLISASRCSSKSDQAIEIETASKQ 182

Query:   390 LQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFGSFGTG-IDSAFSGPFASRP 448
              +  +L   D    V E S  V  P HLQV     + L+FGSF +  +    S   AS  
Sbjct:   183 GKNQSLPKPD----VSEQS-HVTFPFHLQVAKGLQNGLTFGSFDSNFVKEVSSSNGASGG 237

Query:   449 LKNNLEERSETAD-----APSI----GHSDARNP-EYYGDEHLRSTSDANIANRPNVTAG 498
               +N E    T D     +P+     G + AR       ++     S++     P V   
Sbjct:   238 YDSNFESSHGTGDDERESSPTTNGITGVASAREETSTVSEDKDYGISNSATGAEP-VVHS 296

Query:   499 DYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQASSQMQNL 558
             D+  P V    EV K+E++   + +Q ++   AP   +     L SA   Q  +++    
Sbjct:   297 DHIVPPVE---EVPKEEALSNTETHQIAYGQEAPLSVFGLVPSL-SAIG-QPVNTEAAET 351

Query:   559 APFSSMMALRGASISTAQPTQQTMPGASVATG---PALPPHLAVHPYSQPT-LPLGHFAN 614
              P +S       S+ +  P Q ++  A+  T       PP+   + Y  P  +P  +   
Sbjct:   352 QPGNSNSP--PISLVSYPPDQSSIAAATQQTNFLRQQYPPNFFPYGYYSPYYMPPPYIHQ 409

Query:   615 MIGYPFLPQSYTYMPSG 631
              +    +PQ  +Y P G
Sbjct:   410 FLSPNGIPQQ-SYFPQG 425

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090019 GIP1 "GBF-interacting protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
 Identities = 34/115 (29%), Positives = 52/115 (45%)

Query:    19 SIPAGSRKIVQSLKEIVNCPESE--IYAMLKECNMDPNEAVNRLLSQDPFHEVXXXXXXX 76
             SIPA   + +Q+++E+     S+  I+++ KEC  DP+E   +LL  D FHEV       
Sbjct:    13 SIPADLLQTIQNIREVTGKQHSDEDIFSVFKECFSDPHETTQKLLYLDTFHEVRSKRERK 72

Query:    77 XXXXX-XXXXRSR-GASNTSNR---GGRGGTDRYGVRSGAAYFTSNESGTLQSKP 126
                       R R G  N ++       G +  +  +SGA +     SGT  S P
Sbjct:    73 KENLVPNTQGRGRTGRKNFASSYTDASNGRSAAFKKQSGANHIIGG-SGTASSAP 126

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0043388 "positive regulation of DNA binding" evidence=IDA

GO:0051082 "unfolded protein binding" evidence=IDA

DICTYBASE|DDB_G0270760 DDB_G0270760 "unknown" [Dictyostelium discoideum (taxid:44689)]

 Score = 134 (52.2 bits), Expect = 0.00054, Sum P(4) = 0.00054
 Identities = 100/415 (24%), Positives = 166/415 (40%)

Query:   331 PKTNHVGSAPVSSRNMQED-NSGGSSLFENN-LYNNMSSYQPHRHAFEHDEAHDGTSVSA 388
             P  N   S P  S N  +  NSG S+ ++N+  Y N +S   + +    + +++  S ++
Sbjct:   302 PNLN--SSEPQGSVNFSKPFNSGNSNYYQNSGHYRNYNSNNNNNNNIYSNNSNNLNSSTS 359

Query:   389 KLQQLNLQNDDREAPVEEDSPSVIIPNHLQVHSSDCSHLSFGSFGTGIDSAFSGPFASRP 448
              +   N  N+             I+ NH Q + +D   LS  S  + + S+ S   +   
Sbjct:   360 NIYNNNNSNNGGGFTFHH-----IVNNHHQTYEND--PLSSSSSSSILSSSSSSSLSCSS 412

Query:   449 LKN---NLEERSETADA-PSIGHSDARNPE-YYGDEHL-----------RSTSDANIANR 492
               N   N  ++SE+ +   SI  S   N E + GD              RSTS     N 
Sbjct:   413 SSNYFTNYNQQSESFNQFSSIAESSNNNEEPFEGDGQFPPLPNKSNKFGRSTSPTLCINT 472

Query:   493 PNVTAGDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNSAFAHQQAS 552
              N    + +    S  ++ L    +  +  +  S     P    +  Q LN     Q   
Sbjct:   473 NNNNNNNNNHNNFSSSTQSLSP--IPIIVSSSPSSTLQQP--TLQPIQTLNQPI-QQPTL 527

Query:   553 SQMQNLAPFSSMMALRGASISTAQP---TQQTMPGASVATGPALPPHLAVHPYSQPTLPL 609
              Q Q   P   +  ++   + T QP   T  T+P  S    P  P +L V P S PTL  
Sbjct:   528 QQQQQQQPLQQLQ-IQTQQLQTQQPYSPTSSTIPLTSSL--PTTPTNLPVLPPSIPTL-- 582

Query:   610 GHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQSLAAAVLP--QYKNSVSVSSLPQSA 667
                A +I  P  PQ+    PS        + T  +  A  ++P  + K+S + S LP S+
Sbjct:   583 ---AALISPPINPQA---SPSTNS---TNDDTSLKEKAKGLVPVKRGKDSTASSILPSSS 633

Query:   668 AVASGYGFGNSTSIPGGNFPLNTPTAPAG--TTMGYDDVLGSQYKDNNHLISLQQ 720
             + +S     +S+S    +   ++ T+P+G   T G+ + + S    NN  ++ QQ
Sbjct:   634 SSSSS---SSSSSSLSSSSSTSSSTSPSGGLITGGFLNQINSIKNKNNGNLAQQQ 685

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0085362 Vml "Vitelline membrane-like" [Drosophila melanogaster (taxid:7227)]

 Score = 121 (47.7 bits), Expect = 0.00078, P = 0.00078
 Identities = 72/271 (26%), Positives = 102/271 (37%)

Query:   438 SAFSGPFASRPLKNNLEERSETADAPSIGHSDARNPEYYGDEHLRSTSDANIANRPNVTA 497
             SA +GP  S P   +    S +A A S  +S  + P Y       S S     +  +  +
Sbjct:   252 SAPAGPSYSAPAAPSYSAPSYSAPASS--YSALKAPSYSAPA-APSYSAPAAPSYSSSAS 308

Query:   498 GDYDSPAVSQPSEVLKQESVEALQENQYSFPSSAPGYNYENAQQLNS-AFAHQQASSQMQ 556
               Y SPA S  S      +  A +   YS P+ AP Y+   A   ++ A +   A +   
Sbjct:   309 PSYSSPASSSYSAPAAP-TYSAPKAQSYSAPA-APSYSAPAAPSYSAPASSSYSAPAAPS 366

Query:   557 NLAPFS-SMMALRGASISTAQPTQQTMPGASVATGPALPPHLAV--HPYSQPTLPLGHFA 613
               AP + S  A    S S    +  + P A   + PA P + A     YS P  P     
Sbjct:   367 YSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAP 426

Query:   614 NMIGY--PFLPQ-SYTYMPSGFQQAFAGNSTYHQSLAAAVLPQYKNSVSVSSLPQSAAVA 670
                 Y  P  P  S    PS    A +G S      A +  P    S   +S   SA  +
Sbjct:   427 AAPSYSAPAAPSYSAPAAPSYSAPASSGYSAARAYSAGSAAPASGYSAPKTSSGYSAPAS 486

Query:   671 SGYGFGNSTSIPGGNFPLNTPTAPAGTTMGY 701
             SG    +S S P  +   +  +APA  + GY
Sbjct:   487 SGSPAASSYSAPASSTASSGYSAPASKSSGY 517


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.125   0.364    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      815       729   0.00086  121 3  11 23  0.37    35
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  380 KB (2184 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  71.69u 0.18s 71.87t   Elapsed:  00:00:03
  Total cpu time:  71.70u 0.18s 71.88t   Elapsed:  00:00:03
  Start:  Tue May 21 13:58:42 2013   End:  Tue May 21 13:58:45 2013

GO:0009950 "dorsal/ventral axis specification" evidence=IGI

GO:0060388 "vitelline envelope" evidence=IDA

GO:0007305 "vitelline membrane formation involved in chorion-containing eggshell formation" evidence=ISM

GO:0008316 "structural constituent of vitelline membrane" evidence=ISM

GO:0035805 "egg coat" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	815
pfam06972	60	pfam06972, DUF1296, Protein of unknown function (D	3e-31

>gnl|CDD|115617 pfam06972, DUF1296, Protein of unknown function (DUF1296)

 Score =  115 bits (290), Expect = 3e-31
 Identities = 41/60 (68%), Positives = 50/60 (83%), Gaps = 1/60 (1%)

Query: 20 IPAGSRKIVQSLKEIVNC-PESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKRKE 78
          IPA  RK +QS+KE+V    +++IYAMLKECNMDPNE V +LLSQD FHEVKSKR+K+KE
Sbjct: 1  IPAELRKTIQSIKEVVGKHSDADIYAMLKECNMDPNETVQKLLSQDTFHEVKSKREKKKE 60

This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function. Structural modelling suggests this domain may bind nucleic acids. Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	815
PF06972	60	DUF1296: Protein of unknown function (DUF1296); In	99.92
PF02845	42	CUE: CUE domain; InterPro: IPR003892 This domain m	97.74
PF00627	37	UBA: UBA/TS-N domain; InterPro: IPR000449 UBA doma	97.04
smart00546	43	CUE Domain that may be involved in binding ubiquit	97.02
cd00194	38	UBA Ubiquitin Associated domain. The UBA domain is	96.75
smart00165	37	UBA Ubiquitin associated domain. Present in Rad23,	96.72
PF14555	43	UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A	94.49
PRK06369	115	nac nascent polypeptide-associated complex protein	92.87
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	92.7
PF11547	53	E3_UbLigase_EDD: E3 ubiquitin ligase EDD; InterPro	92.5
PRK09377	290	tsf elongation factor Ts; Provisional	92.23
TIGR00601	378	rad23 UV excision repair protein Rad23. All protei	92.05
COG1308	122	EGD2 Transcription factor homologous to NACalpha-B	91.79
PF08938	79	HBS1_N: HBS1 N-terminus; InterPro: IPR015033 This	91.22
CHL00098	200	tsf elongation factor Ts	89.75
TIGR00116	290	tsf translation elongation factor Ts. This protein	89.09
PRK12332	198	tsf elongation factor Ts; Reviewed	87.95
PF03474	39	DMA: DMRTA motif; InterPro: IPR005173 This region	87.77
COG0264	296	Tsf Translation elongation factor Ts [Translation,	85.51
KOG0943	3015	consensus Predicted ubiquitin-protein ligase/hyper	80.98

>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function

Probab=99.92  E-value=6.5e-26  Score=188.42  Aligned_cols=59  Identities=86%  Similarity=1.268  Sum_probs=57.4

Q ss_pred             CCcchHHHHHhhhhccCC-ChHHHHHHHHhcCCCHHHHHHhhhcCCCcceeecccccccc
Q 003494           20 IPAGSRKIVQSLKEIVNC-PESEIYAMLKECNMDPNEAVNRLLSQDPFHEVKSKRDKRKE   78 (815)
Q Consensus        20 ip~~~rk~Vq~ikEi~~~-seedi~~aL~ecn~D~n~av~rLl~q~~f~EVkkKr~kkKe   78 (815)
                      ||+++||+||.||||+++ ||+|||+||+|||||||||++|||+||+|||||+||+||||
T Consensus         1 IP~~~rk~VQ~iKEiv~~hse~eIya~L~ecnMDpnea~qrLL~qD~FheVk~krdkkKE   60 (60)
T PF06972_consen    1 IPAASRKTVQSIKEIVGCHSEEEIYAMLKECNMDPNEAVQRLLSQDPFHEVKSKRDKKKE   60 (60)
T ss_pred             CChHHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCHHHHHHHHHhcCcHHHHHHhhhhccC
Confidence            899999999999999955 99999999999999999999999999999999999999997

>PF02845 CUE: CUE domain; InterPro: IPR003892 This domain may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=97.74  E-value=3.5e-05  Score=60.42  Aligned_cols=38  Identities=32%  Similarity=0.433  Sum_probs=35.5

Q ss_pred             HHHHHhhhhcc-CCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           25 RKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~-~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      +++|+.||||| +|+++.|..+|++|++|++.||+.||+
T Consensus         2 ~~~v~~L~~mFP~~~~~~I~~~L~~~~~~ve~ai~~LL~   40 (42)
T PF02845_consen    2 EEMVQQLQEMFPDLDREVIEAVLQANNGDVEAAIDALLE   40 (42)
T ss_dssp             HHHHHHHHHHSSSS-HHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            57899999999 999999999999999999999999997

CUE domains also occur in two proteins of the IL-1 signal transduction pathway, tollip and TAB2.; GO: 0005515 protein binding; PDB: 2EKF_A 1OTR_A 1P3Q_Q 1MN3_A 1WGL_A 2EJS_A 2DAE_A 2DHY_A 2DI0_A.

>PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases []

Probab=97.04  E-value=0.00086  Score=51.27  Aligned_cols=35  Identities=29%  Similarity=0.421  Sum_probs=32.1

Q ss_pred             HHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhh
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRL   60 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rL   60 (815)
                      +++|++|+++ |.+++++..||+.|++|++.||+.|
T Consensus         3 ~~~v~~L~~m-Gf~~~~~~~AL~~~~~nve~A~~~L   37 (37)
T PF00627_consen    3 EEKVQQLMEM-GFSREQAREALRACNGNVERAVDWL   37 (37)
T ss_dssp             HHHHHHHHHH-TS-HHHHHHHHHHTTTSHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHhC
Confidence            6889999999 9999999999999999999999876

The human homologue of yeast Rad23A is one example of a nucleotide excision-repair protein that contains both an internal and a C-terminal UBA domain. The solution structure of human Rad23A UBA(2) showed that the domain forms a compact three-helix bundle []. Comparison of the structures of UBA(1) and UBA(2) reveals that both form very similar folds and have a conserved large hydrophobic surface patch which may be a common protein-interacting surface present in diverse UBA domains. Evidence that ubiquitin binds to UBA domains leads to the prediction that the hydrophobic surface patch of UBA domains interacts with the hydrophobic surface on the five-stranded beta-sheet of ubiquitin []. This domain is similar in sequence to the N-terminal domain of translation elongation factor EF1B (or EF-Ts) from bacteria, mitochondria and chloroplasts. More information about EF1B (EF-Ts) proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0005515 protein binding; PDB: 2DAI_A 2OO9_C 2JUJ_A 1WHC_A 1YLA_A 2O25_B 3K9O_A 3K9P_A 3F92_A 3E46_A ....

>smart00546 CUE Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=97.02  E-value=0.00096  Score=52.44  Aligned_cols=39  Identities=28%  Similarity=0.406  Sum_probs=36.9

Q ss_pred             hHHHHHhhhhcc-CCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           24 SRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        24 ~rk~Vq~ikEi~-~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      ..+.|..|+|+| +.+++.|...|++|++|++.||+.||+
T Consensus         2 ~~~~v~~L~~mFP~l~~~~I~~~L~~~~g~ve~~i~~LL~   41 (43)
T smart00546        2 NDEALHDLKDMFPNLDEEVIKAVLEANNGNVEATINNLLE   41 (43)
T ss_pred             hHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            457899999999 999999999999999999999999997

CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2. Ponting (Biochem. J.) "Proteins of the Endoplasmic reticulum" (in press)

>cd00194 UBA Ubiquitin Associated domain

Probab=96.75  E-value=0.0024  Score=48.48  Aligned_cols=37  Identities=24%  Similarity=0.312  Sum_probs=34.1

Q ss_pred             HHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      +++|++|.++ |.+++++..||+.|++|++.|++.|++
T Consensus         2 ~~~v~~L~~m-Gf~~~~~~~AL~~~~~d~~~A~~~L~~   38 (38)
T cd00194           2 EEKLEQLLEM-GFSREEARKALRATNNNVERAVEWLLE   38 (38)
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHhC
Confidence            5789999887 999999999999999999999998874

The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been suggested that UBA domains are involved in conferring protein target specificity. The domain, a compact three helix bundle, has a conserved GFP-loop and the proline is thought to be critical for binding. The UBA domain is distinct from the conserved three helical domain seen in the N-terminus of EF-TS and eukaryotic NAC proteins.

>smart00165 UBA Ubiquitin associated domain

Probab=96.72  E-value=0.0024  Score=48.27  Aligned_cols=36  Identities=22%  Similarity=0.305  Sum_probs=33.6

Q ss_pred             HHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhh
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLL   61 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl   61 (815)
                      +++|++|+++ |.+++++..||+.|++|++.|++.|+
T Consensus         2 ~~~v~~L~~m-Gf~~~~a~~aL~~~~~d~~~A~~~L~   37 (37)
T smart00165        2 EEKIDQLLEM-GFSREEALKALRAANGNVERAAEYLL   37 (37)
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHC
Confidence            5789999998 99999999999999999999999875

Present in Rad23, SNF1-like kinases. The newly-found UBA in p62 is known to bind ubiquitin.

>PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A

Probab=94.49  E-value=0.053  Score=42.95  Aligned_cols=38  Identities=21%  Similarity=0.249  Sum_probs=33.3

Q ss_pred             HHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      +++|.+.++|+|++++.....|+.||.|++.||+..+.
T Consensus         1 ~e~i~~F~~iTg~~~~~A~~~L~~~~wdle~Av~~y~~   38 (43)
T PF14555_consen    1 DEKIAQFMSITGADEDVAIQYLEANNWDLEAAVNAYFD   38 (43)
T ss_dssp             HHHHHHHHHHH-SSHHHHHHHHHHTTT-HHHHHHHHHH
T ss_pred             CHHHHHHHHHHCcCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence            57899999999999999999999999999999987665

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=92.87  E-value=0.13  Score=49.39  Aligned_cols=39  Identities=28%  Similarity=0.285  Sum_probs=35.4

Q ss_pred             hHHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           24 SRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        24 ~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      ..+.|+.|.|-+|+|+++...||++||+|+-+||-.|-+
T Consensus        76 ~~edI~lv~~q~gvs~~~A~~AL~~~~gDl~~AI~~L~~  114 (115)
T PRK06369         76 PEEDIELVAEQTGVSEEEARKALEEANGDLAEAILKLSS  114 (115)
T ss_pred             CHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHHHhc
Confidence            467888899999999999999999999999999987754

>TIGR00264 alpha-NAC-related protein

Probab=92.70  E-value=0.14  Score=49.33  Aligned_cols=39  Identities=23%  Similarity=0.314  Sum_probs=34.8

Q ss_pred             hHHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           24 SRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        24 ~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      ..+.|..|.|-+++|+++...||++||+|+-+||-+|-+
T Consensus        78 ~~eDI~lV~eq~gvs~e~A~~AL~~~~gDl~~AI~~L~~  116 (116)
T TIGR00264        78 TEDDIELVMKQCNVSKEEARRALEECGGDLAEAIMKLEE  116 (116)
T ss_pred             CHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHHHhhC
Confidence            357788899999999999999999999999999988753

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>PF11547 E3_UbLigase_EDD: E3 ubiquitin ligase EDD; InterPro: IPR024725 EDD, the ER ubiquitin ligase from the HECT ligases, contains an N-terminal ubiquitin-associated (UBA) domain which binds ubiquitin

Probab=92.50  E-value=0.18  Score=42.01  Aligned_cols=43  Identities=30%  Similarity=0.458  Sum_probs=32.4

Q ss_pred             ccCCcchHHHHHhhhhcc-CCChHHHHHHHHhcCCCHHHHHHhhhcC
Q 003494           18 SSIPAGSRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        18 ~~ip~~~rk~Vq~ikEi~-~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      ..||.+   .|.+...++ |.|.+-|+.-|+.+|.|+|+||+-||+.
T Consensus         6 ~~vPed---lI~q~q~VLqgksR~vIirELqrTnLdVN~AvNNlLsR   49 (53)
T PF11547_consen    6 SQVPED---LINQAQVVLQGKSRNVIIRELQRTNLDVNLAVNNLLSR   49 (53)
T ss_dssp             GGS-HH---HHHHHHHHSTTS-HHHHHHHHHHTTT-HHHHHHHHHHH
T ss_pred             ccCCHH---HHHHHHHHHcCCcHHHHHHHHHHhcccHHHHHHHHhcc
Confidence            445544   555555566 9999999999999999999999999973

Ubiquitin is recognised by helices alpha-1 and -3 in in the UBA domain. EDD is involved in DNA damage repair pathways and binds to mono-ubiquitinated proteins [].; GO: 0043130 ubiquitin binding; PDB: 2QHO_H.

>PRK09377 tsf elongation factor Ts; Provisional

Probab=92.23  E-value=0.13  Score=56.10  Aligned_cols=38  Identities=21%  Similarity=0.238  Sum_probs=35.2

Q ss_pred             HHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      -+.|+.|||.+|..--||..||.|||+|.+.|++.|-+
T Consensus         6 ~~~IK~LR~~Tgagm~dCKkAL~e~~gD~ekAi~~Lrk   43 (290)
T PRK09377          6 AALVKELRERTGAGMMDCKKALTEADGDIEKAIEWLRK   43 (290)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            46799999999999999999999999999999998865

>TIGR00601 rad23 UV excision repair protein Rad23

Probab=92.05  E-value=0.15  Score=57.39  Aligned_cols=41  Identities=20%  Similarity=0.350  Sum_probs=38.5

Q ss_pred             cchHHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhcC
Q 003494           22 AGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      ...+.+|+.|.|| ||.+++|..||+-+.++|+.||++||.+
T Consensus       154 ~~~e~~I~~i~eM-Gf~R~qV~~ALRAafNNPdRAVEYL~tG  194 (378)
T TIGR00601       154 SERETTIEEIMEM-GYEREEVERALRAAFNNPDRAVEYLLTG  194 (378)
T ss_pred             hHHHHHHHHHHHh-CCCHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence            3668899999999 9999999999999999999999999994

All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG1308 EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription]

Probab=91.79  E-value=0.2  Score=48.58  Aligned_cols=39  Identities=23%  Similarity=0.240  Sum_probs=34.2

Q ss_pred             hHHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           24 SRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        24 ~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      .++-|+.|.|=++.|++|...||+|||+|+-+||-+|.+
T Consensus        84 ~eeDIkLV~eQa~VsreeA~kAL~e~~GDlaeAIm~L~~  122 (122)
T COG1308          84 SEEDIKLVMEQAGVSREEAIKALEEAGGDLAEAIMKLTE  122 (122)
T ss_pred             CHHHHHHHHHHhCCCHHHHHHHHHHcCCcHHHHHHHhcC
Confidence            356677788888999999999999999999999999863

>PF08938 HBS1_N: HBS1 N-terminus; InterPro: IPR015033 This domain is found in various eukaryotic HBS1-like proteins

Probab=91.22  E-value=0.072  Score=47.40  Aligned_cols=38  Identities=26%  Similarity=0.399  Sum_probs=31.0

Q ss_pred             HHHHHhhhhcc--CC-ChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           25 RKIVQSLKEIV--NC-PESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~--~~-seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      +.-+..||+++  .. ++.+|.-||-.|++|++.||..||+
T Consensus        29 ~~~l~~vr~~Lg~~~~~e~~i~eal~~~~fDvekAl~~Ll~   69 (79)
T PF08938_consen   29 YSCLPQVREVLGDYVPPEEQIKEALWHYYFDVEKALDYLLS   69 (79)
T ss_dssp             CHHCCCHHHHCCCCC--CCHHHHHHHHTTT-CCHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            34566788888  35 8999999999999999999999998

; PDB: 1UFZ_A 3IZQ_1.

>CHL00098 tsf elongation factor Ts

Probab=89.75  E-value=0.35  Score=50.39  Aligned_cols=37  Identities=22%  Similarity=0.276  Sum_probs=34.4

Q ss_pred             HHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           26 KIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        26 k~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      +.|+.|||.+|..--||..||.+|++|.+.|++.|-+
T Consensus         3 ~~ik~LR~~Tgag~~dck~AL~e~~gd~~~A~~~Lr~   39 (200)
T CHL00098          3 ELVKELRDKTGAGMMDCKKALQEANGDFEKALESLRQ   39 (200)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            5799999999999999999999999999999997755

>TIGR00116 tsf translation elongation factor Ts

Probab=89.09  E-value=0.4  Score=52.50  Aligned_cols=37  Identities=24%  Similarity=0.287  Sum_probs=34.6

Q ss_pred             HHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           26 KIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        26 k~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      +.|+.|||.+|..--||..||.||++|.+.|++.|-+
T Consensus         6 ~~IK~LRe~Tgagm~dCKkAL~e~~gDiekAi~~LRk   42 (290)
T TIGR00116         6 QLVKELRERTGAGMMDCKKALTEANGDFEKAIKNLRE   42 (290)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            5799999999999999999999999999999998755

This protein is found in Bacteria, mitochondria, and chloroplasts.

>PRK12332 tsf elongation factor Ts; Reviewed

Probab=87.95  E-value=0.55  Score=48.80  Aligned_cols=37  Identities=27%  Similarity=0.311  Sum_probs=34.5

Q ss_pred             HHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           26 KIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        26 k~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      +.|+.|||.+|..--||..||.+|++|.+.|+..|-+
T Consensus         6 ~~ik~LR~~tga~~~~ck~AL~~~~gd~~~A~~~lr~   42 (198)
T PRK12332          6 KLVKELREKTGAGMMDCKKALEEANGDMEKAIEWLRE   42 (198)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            6799999999999999999999999999999997765

>PF03474 DMA: DMRTA motif; InterPro: IPR005173 This region is found to the C terminus of the DM DNA-binding domain IPR001275 from INTERPRO []

Probab=87.77  E-value=0.6  Score=37.36  Aligned_cols=36  Identities=22%  Similarity=0.387  Sum_probs=31.1

Q ss_pred             HHHHhhhhcc-CCChHHHHHHHHhcCCCHHHHHHhhh
Q 003494           26 KIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLL   61 (815)
Q Consensus        26 k~Vq~ikEi~-~~seedi~~aL~ecn~D~n~av~rLl   61 (815)
                      .-+..|..+| ......+=.+|+-|++|+-.||+.+|
T Consensus         3 ~pidiL~rvFP~~kr~~Le~iL~~C~GDvv~AIE~~l   39 (39)
T PF03474_consen    3 SPIDILTRVFPHQKRSVLELILQRCNGDVVQAIEQFL   39 (39)
T ss_pred             CHHHHHHHHCCCCChHHHHHHHHHcCCcHHHHHHHhC
Confidence            3466788899 88899999999999999999998765

DM-domain proteins with this motif are known as DMRTA proteins. The function of this region is unknown.

>COG0264 Tsf Translation elongation factor Ts [Translation, ribosomal structure and biogenesis]

Probab=85.51  E-value=0.87  Score=50.07  Aligned_cols=38  Identities=24%  Similarity=0.265  Sum_probs=34.7

Q ss_pred             HHHHHhhhhccCCChHHHHHHHHhcCCCHHHHHHhhhc
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      -+.|+.|||.+|..=-||..||.||++|.+.||+.|=+
T Consensus         6 a~~VKeLRe~TgAGMmdCKkAL~E~~Gd~EkAie~LR~   43 (296)
T COG0264           6 AALVKELREKTGAGMMDCKKALEEANGDIEKAIEWLRE   43 (296)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            36799999999999999999999999999999997755

>KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=80.98  E-value=2.5  Score=53.61  Aligned_cols=48  Identities=31%  Similarity=0.522  Sum_probs=41.4

Q ss_pred             CcccCCcc--hHHHHHhhhhcc-CCChHHHHHHHHhcCCCHHHHHHhhhcC
Q 003494           16 GISSIPAG--SRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        16 ~~~~ip~~--~rk~Vq~ikEi~-~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      |+-.||+.  .++.|.+..-|+ |.|.+-|+.-|+.++.|+|+||+-||+.
T Consensus       179 gaPriPAsniPEELInnaQqVLQGKSRdVIIRELQRTgLdVNeAVNNLLSR  229 (3015)
T KOG0943|consen  179 GAPRIPASNIPEELINNAQQVLQGKSRDVIIRELQRTGLDVNEAVNNLLSR  229 (3015)
T ss_pred             CCCcCCcccCcHHHHHHHHHHHhCCchhHHHHHHHHhCCcHHHHHHhhhcc
Confidence            45566653  578888888888 9999999999999999999999999976

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	815
d1wj7a1	91	a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-li	6e-04

>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]} Length = 91

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 2-like Ubap2l
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.2 bits (86), Expect = 6e-04
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLL----SQDPFHEVKSKRDKRKE 78
           + V+ L +I    + E    L +CN D N A+N LL        +  V  K+    +
Sbjct: 33 EEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQ 90

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	815
d1wj7a1	91	Ubiquitin-associated protein 2-like Ubap2l {Mouse	99.18
d1wgla_	59	Toll-interacting protein {Human (Homo sapiens) [Ta	96.64
d1oqya1	41	DNA repair protein Hhr23a {Human (Homo sapiens) [T	96.24
d1wgna_	63	Ubiquitin-associated protein 1, UBAP1 {Human (Homo	96.16
d1vg5a_	73	Rhomboid family protein At3g58460 {Thale cress (Ar	96.11
d1xb2b1	56	Elongation factor Ts (EF-Ts), N-terminal domain {C	95.46
d1veja1	61	4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]	95.29
d1aipc1	52	Elongation factor Ts (EF-Ts), N-terminal domain {T	95.01
d1efub3	54	Elongation factor Ts (EF-Ts), N-terminal domain {E	94.94
d1wiva_	73	Ubiquitin isopeptidase T {Thale cress (Arabidopsis	94.5
d2bwba1	44	DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta	93.99
d1wjia_	63	Tudor domain containing protein 3, TDRD3 {Human (H	93.86
d1mn3a_	54	Vacuolar protein sorting-associated protein vps9 {	93.31
d2daha1	41	Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}	92.8
d2dnaa1	50	Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus	92.32
d2g3qa1	43	Endocytic protein Ede1, YBL047C {Saccharomyces cer	91.47
d2di0a1	63	Activating signal cointegrator 1 complex subunit 2	88.27
d1vdla_	80	Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (M	87.66
d2cpwa1	51	Cbl-interacting protein p70, STS1 {Human (Homo sap	85.87
d1whca_	64	UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [Ta	85.55
d1v92a_	46	NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {	82.44

>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 2-like Ubap2l
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=9.1e-12  Score=89.27  Aligned_cols=53  Identities=30%  Similarity=0.407  Sum_probs=49.1

Q ss_pred             CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC----CCCEEECCC
Q ss_conf             94159998854301388857899998730799779998551599----840210232
Q 003494           21 PAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQD----PFHEVKSKR   73 (815)
Q Consensus        21 p~~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~q~----~f~EVkkKr   73 (815)
                      -++++++|++|.|++++++++++.||+|||+|++.||+.||++.    .|+.++|||
T Consensus        29 D~~i~~kVkql~e~T~rsede~~~ALhDcn~D~~~AIn~lLEg~~~~~~Wet~~kKk   85 (91)
T d1wj7a1          29 DADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKK   85 (91)
T ss_dssp             CHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCSSSCSSCSSCCCCC
T ss_pred             CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCC
T ss_conf             088999999999996788999999985178539999999995578877323202003

>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: CUE domain
domain: Toll-interacting protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.0011  Score=38.48  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=40.8

Q ss_pred             CCCCHHHHHHHHHHCC-CCCHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             8941599988543013-8885789999873079977999855159
Q 003494           20 IPAGSRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        20 ip~~~rk~Vq~ikEi~-~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      .+...++.|+.||||| +-.++-|..+|..|+++++.||+.||+-
T Consensus         5 ~s~~~Ee~i~~LkeMFP~~D~~vI~~VL~a~~G~vd~aid~LL~M   49 (59)
T d1wgla_           5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQM   49 (59)
T ss_dssp             SSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             576769999999998788779999999999399779999999855

>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: DNA repair protein Hhr23a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.002  Score=36.84  Aligned_cols=40  Identities=18%  Similarity=0.340  Sum_probs=37.4

Q ss_pred             CCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             41599988543013888578999987307997799985515
Q 003494           22 AGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      ..+++.|++|.|| |++++.+..||+.|+++++.|++.|++
T Consensus         2 ~~~e~~i~~L~~M-GF~~~~a~~AL~~~~~N~e~A~~~LlS   41 (41)
T d1oqya1           2 SEYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLT   41 (41)
T ss_dssp             TTHHHHHHHHHTT-TCCSHHHHHHHHHSCSSTTHHHHTTTT
T ss_pred             HHHHHHHHHHHHC-CCCHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf             2689999999985-998999999999858999999998729

>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 1, UBAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0017  Score=37.24  Aligned_cols=46  Identities=9%  Similarity=0.235  Sum_probs=40.3

Q ss_pred             CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             54589415999885430138885789999873079977999855159
Q 003494           17 ISSIPAGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        17 ~~~ip~~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      ...++...++.|++|.+| +.+++.+..||+.|++|++.|++.|++.
T Consensus        12 ~~~~~~~de~~v~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Lls~   57 (63)
T d1wgna_          12 LQMLSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAH   57 (63)
T ss_dssp             HHTCCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHC-CCCHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             445780249999999986-9989999999999099999999999928

>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Rhomboid family protein At3g58460
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.11  E-value=0.0042  Score=34.84  Aligned_cols=41  Identities=27%  Similarity=0.311  Sum_probs=37.8

Q ss_pred             CCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             415999885430138885789999873079977999855159
Q 003494           22 AGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      ...++.|++|+|| +.+++.+..||+.|++|++.|++.||+.
T Consensus        27 ~~~ee~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Ll~~   67 (73)
T d1vg5a_          27 AASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQ   67 (73)
T ss_dssp             CCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHH-CCCHHHHHHHHHHHCCCHHHHHHHHHHC
T ss_conf             7689999999995-8999999999999189999999999827

>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Cow (Bos taurus), mitochondrial [TaxId: 9913]

Probab=95.46  E-value=0.007  Score=33.44  Aligned_cols=40  Identities=18%  Similarity=0.225  Sum_probs=36.5

Q ss_pred             CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             1599988543013888578999987307997799985515
Q 003494           23 GSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        23 ~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      ..-+.|+.|+|.++..--||-.||.||++|.+.|++.|-+
T Consensus         3 ~s~~lvk~LRe~Tga~~~dcKkAL~e~~gD~ekA~e~Lrk   42 (56)
T d1xb2b1           3 SSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHK   42 (56)
T ss_dssp             HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             4499999999986988999999999838999999999999

>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: 4931431F19Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.29  E-value=0.0084  Score=32.93  Aligned_cols=40  Identities=18%  Similarity=0.215  Sum_probs=34.5

Q ss_pred             CCHHHHHHHHHHCCCCC-HHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             41599988543013888-578999987307997799985515
Q 003494           22 AGSRKIVQSLKEIVNCP-ESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~~~s-eedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      .-++.-+.+|+|| |.. ++.++.||..|+||++.||++||.
T Consensus        20 ~ry~~QL~qL~eM-GF~d~~~Nl~AL~~t~Gdv~~Aie~Ll~   60 (61)
T d1veja1          20 GRYQQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLG   60 (61)
T ss_dssp             TTSHHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHC-CCCCHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf             9999999999993-8997899999999918989999999865

>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Thermus thermophilus [TaxId: 274]

Probab=95.01  E-value=0.012  Score=32.02  Aligned_cols=38  Identities=18%  Similarity=0.310  Sum_probs=34.8

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             99988543013888578999987307997799985515
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      -+.|+.|+|.++.+-.||-.||.||++|.+.|++.|-+
T Consensus         3 ~elvK~LR~~Tga~~~dcKkAL~e~~gD~ekA~e~Lr~   40 (52)
T d1aipc1           3 MELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRE   40 (52)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             88999999986987999999999839999999999999

>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.94  E-value=0.013  Score=31.84  Aligned_cols=38  Identities=21%  Similarity=0.227  Sum_probs=34.8

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             99988543013888578999987307997799985515
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      -+.|+.|+|.++..-.||-.||.||++|.+.|++.|-+
T Consensus         5 ~~~iK~LR~~Tgag~~dCKkAL~e~~gD~ekA~e~Lr~   42 (54)
T d1efub3           5 ASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRK   42 (54)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             99999999986987999999999838999999999999

>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin isopeptidase T
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.50  E-value=0.02  Score=30.60  Aligned_cols=40  Identities=18%  Similarity=0.168  Sum_probs=36.3

Q ss_pred             CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             15999885430138885789999873079977999855159
Q 003494           23 GSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        23 ~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      -.++.|++|.|| |.+++.+..||+.|+++++.||+.|++.
T Consensus        28 ~d~~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~Av~~Lls~   67 (73)
T d1wiva_          28 IDQSSVDTLLSF-GFAEDVARKALKASGGDIEKATDWVFNN   67 (73)
T ss_dssp             SCHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHC-CCCHHHHHHHHHHCCCCHHHHHHHHHCC
T ss_conf             899999999936-9999999999999299999999999818

>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: DSK2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.99  E-value=0.038  Score=28.80  Aligned_cols=41  Identities=15%  Similarity=0.111  Sum_probs=34.3

Q ss_pred             CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             15999885430138885789999873079977999855159
Q 003494           23 GSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        23 ~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      .++.-+++|+||==..++.++.||..|+||++.||++||.+
T Consensus         4 ry~~QL~qL~~MGF~d~~~Ni~AL~~t~GdV~~Aie~Ll~g   44 (44)
T d2bwba1           4 RYEHQLRQLNDMGFFDFDRNVAALRRSGGSVQGALDSLLNG   44 (44)
T ss_dssp             HTHHHHHHHHHTTCCCHHHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
T ss_conf             89999999999499968999999999499899999998676

>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Tudor domain containing protein 3, TDRD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.86  E-value=0.035  Score=29.05  Aligned_cols=38  Identities=18%  Similarity=0.265  Sum_probs=35.8

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             999885430138885789999873079977999855159
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      ++.|++|.+| +.++..+..||+.|++|++.|++.|++.
T Consensus        10 ~~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~~wL~~~   47 (63)
T d1wjia_          10 EKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTS   47 (63)
T ss_dssp             HHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHC-CCCHHHHHHHHHHHCCCHHHHHHHHHHC
T ss_conf             9999999996-9999999999999198999999999978

>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: CUE domain
domain: Vacuolar protein sorting-associated protein vps9
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.31  E-value=0.039  Score=28.76  Aligned_cols=41  Identities=17%  Similarity=0.186  Sum_probs=37.4

Q ss_pred             CCHHHHHHHHHHCC-CCCHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             41599988543013-888578999987307997799985515
Q 003494           22 AGSRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~-~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      ..+++.++.||+|| +-..+=|-..|..|+|+++.||+.||.
T Consensus        10 ~e~~e~~~~Lk~MFP~~D~~VI~~VL~a~~G~vd~aidaLL~   51 (54)
T d1mn3a_          10 NERKDTLNTLQNMFPDMDPSLIEDVCIAKKSRIEPCVDALLS   51 (54)
T ss_dssp             HHHHHHHHHHHHHCTTSCHHHHHHHHSCSSCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             999999999998879997999999999929977999999871

>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquilin-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.055  Score=27.81  Aligned_cols=39  Identities=15%  Similarity=0.097  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             599988543013888578999987307997799985515
Q 003494           24 SRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        24 ~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      ++..+.+|+||==..++.+..||..|+||++.||++|+.
T Consensus         2 y~~QL~~L~~MGF~d~~~Ni~AL~~t~Gdv~~Aie~Ll~   40 (41)
T d2daha1           2 FQVQLEQLRSMGFLNREANLQALIATGGDVDAAVEKLRQ   40 (41)
T ss_dssp             SHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             689999999859997899999999839989999999975

>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquilin-like protein Ubqlnl
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.32  E-value=0.097  Score=26.26  Aligned_cols=42  Identities=19%  Similarity=0.121  Sum_probs=35.2

Q ss_pred             CCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             415999885430138885789999873079977999855159
Q 003494           22 AGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      ..++.-+.+|+||==..++.++.||..|+||++.||++|++.
T Consensus         6 ~ry~~QL~qL~~MGF~d~~~Ni~AL~~t~GdV~~Aie~Ll~~   47 (50)
T d2dnaa1           6 VRFSKEMECLQAMGFVNYNANLQALIATDGDTNAAIYKLKSS   47 (50)
T ss_dssp             HHTHHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             999999999999499979999999999399899999999865

>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Endocytic protein Ede1, YBL047C
species: Saccharomyces cerevisiae [TaxId: 4932]

Probab=91.47  E-value=0.14  Score=25.30  Aligned_cols=35  Identities=31%  Similarity=0.446  Sum_probs=30.1

Q ss_pred             HHHHHCC--CCCHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             8543013--8885789999873079977999855159
Q 003494           29 QSLKEIV--NCPESEIYAMLKECNMDPNEAVNRLLSQ   63 (815)
Q Consensus        29 q~ikEi~--~~seedi~~aL~ecn~D~n~av~rLl~q   63 (815)
                      ..|+|++  +.+|++-..||+.||.|...|++.||++
T Consensus         6 ~ai~eL~~MGF~e~~A~~AL~k~~wnleaAtN~LLd~   42 (43)
T d2g3qa1           6 LAVEELSGMGFTEEEAHNALEKCNWDLEAATNFLLDS   42 (43)
T ss_dssp             HHHHHHHTTTSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             9999999558788999999998589799999998705

>d2di0a1 a.5.2.4 (A:8-70) Activating signal cointegrator 1 complex subunit 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: CUE domain
domain: Activating signal cointegrator 1 complex subunit 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.27  E-value=0.35  Score=22.77  Aligned_cols=43  Identities=21%  Similarity=0.419  Sum_probs=39.8

Q ss_pred             CCHHHHHHHHHHCC-CCCHHHHHHHHHHCCCCHHHHHHHHHCCC
Q ss_conf             41599988543013-88857899998730799779998551599
Q 003494           22 AGSRKIVQSLKEIV-NCPESEIYAMLKECNMDPNEAVNRLLSQD   64 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~-~~seedi~~aL~ecn~D~n~av~rLl~q~   64 (815)
                      +..+.+|.+||++| +-.+.=|.+.|..-+.|++..|+.||+..
T Consensus         4 vel~s~I~qV~Dl~PdLG~GFi~~~L~~Y~~n~E~vI~~lLe~~   47 (63)
T d2di0a1           4 VELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEER   47 (63)
T ss_dssp             HHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             68999999999985877579999999996899999999998467

>d1vdla_ a.5.2.1 (A:) Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin carboxyl-terminal hydrolase 25
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.66  E-value=0.35  Score=22.75  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=36.4

Q ss_pred             CCHHHHHHHHHHCCCCCHHHHH-HHHHHCCCCHHHHHHHHHCCC
Q ss_conf             4159998854301388857899-998730799779998551599
Q 003494           22 AGSRKIVQSLKEIVNCPESEIY-AMLKECNMDPNEAVNRLLSQD   64 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~~~seedi~-~aL~ecn~D~n~av~rLl~q~   64 (815)
                      ..-...+.+||||++-.|..++ .||+..+||..+||-.|.++.
T Consensus        22 ~hqQ~lLNQLrEITGIqD~q~L~~ALkas~Gdl~~AV~~LT~~~   65 (80)
T d1vdla_          22 KHQQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN   65 (80)
T ss_dssp             SCHHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
T ss_conf             48999999999973778599999999803788999999986278

>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Cbl-interacting protein p70, STS1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.87  E-value=0.27  Score=23.46  Aligned_cols=41  Identities=15%  Similarity=0.155  Sum_probs=35.4

Q ss_pred             CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC-CHHHHHHHHHC
Q ss_conf             9415999885430138885789999873079-97799985515
Q 003494           21 PAGSRKIVQSLKEIVNCPESEIYAMLKECNM-DPNEAVNRLLS   62 (815)
Q Consensus        21 p~~~rk~Vq~ikEi~~~seedi~~aL~ecn~-D~n~av~rLl~   62 (815)
                      +......|++|.|| |.+++.+..||..|++ |++.|++-|++
T Consensus         9 ~~~~~~~l~~L~~M-GF~~~~a~~AL~~t~n~~ve~A~~WLl~   50 (51)
T d2cpwa1           9 TIKHGSALDVLLSM-GFPRARAQKALASTGGRSVQTACDWLFS   50 (51)
T ss_dssp             SSSCCCHHHHHHHH-TCCHHHHHHHHHHTTTSCHHHHHHHHHS
T ss_pred             CCCCHHHHHHHHHC-CCCHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf             89899999999995-9999999999999779999999999973

>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: UBA/UBX 33.3 kDa protein
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.55  E-value=0.33  Score=22.95  Aligned_cols=37  Identities=19%  Similarity=0.210  Sum_probs=33.7

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHCCC-CHHHHHHHHHC
Q ss_conf             999885430138885789999873079-97799985515
Q 003494           25 RKIVQSLKEIVNCPESEIYAMLKECNM-DPNEAVNRLLS   62 (815)
Q Consensus        25 rk~Vq~ikEi~~~seedi~~aL~ecn~-D~n~av~rLl~   62 (815)
                      ++.|++|.|| +.+++.+..||+.|++ +++.|++-|++
T Consensus        10 ~~~l~~L~~M-GF~~~~a~~AL~~t~n~~~e~A~~Wl~~   47 (64)
T d1whca_          10 LTALESLIEM-GFPRGRAEKALALTGNQGIEAAMDWLME   47 (64)
T ss_dssp             CCHHHHHHTT-TCCHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHC-CCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             9999999995-9999999999999489999999999998

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.44  E-value=0.88  Score=20.26  Aligned_cols=41  Identities=10%  Similarity=0.167  Sum_probs=36.7

Q ss_pred             CCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             41599988543013888578999987307997799985515
Q 003494           22 AGSRKIVQSLKEIVNCPESEIYAMLKECNMDPNEAVNRLLS   62 (815)
Q Consensus        22 ~~~rk~Vq~ikEi~~~seedi~~aL~ecn~D~n~av~rLl~   62 (815)
                      .+.++.|.+..+|++++++.-..-|..|+.|++.||..-.+
T Consensus         3 ~~~~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai~~yfe   43 (46)
T d1v92a_           3 EERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYE   43 (46)
T ss_dssp             THHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             63999999999998959999999999959969999999986