Citrus Sinensis ID: 003510
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | 2.2.26 [Sep-21-2011] | |||||||
| P0CB22 | 1083 | Histone-lysine N-methyltr | yes | no | 0.984 | 0.739 | 0.706 | 0.0 | |
| Q9C5X4 | 1062 | Histone-lysine N-methyltr | no | no | 0.969 | 0.742 | 0.671 | 0.0 | |
| Q8GZ42 | 1043 | Histone-lysine N-methyltr | no | no | 0.544 | 0.424 | 0.338 | 9e-67 | |
| Q9SUE7 | 1027 | Histone-lysine N-methyltr | no | no | 0.518 | 0.410 | 0.336 | 7e-65 | |
| Q9M364 | 1018 | Histone-lysine N-methyltr | no | no | 0.517 | 0.413 | 0.321 | 1e-62 | |
| Q24742 | 3828 | Histone-lysine N-methyltr | N/A | no | 0.237 | 0.050 | 0.430 | 9e-42 | |
| P20659 | 3726 | Histone-lysine N-methyltr | yes | no | 0.237 | 0.051 | 0.426 | 7e-41 | |
| Q03164 | 3969 | Histone-lysine N-methyltr | yes | no | 0.189 | 0.038 | 0.5 | 4e-38 | |
| P55200 | 3966 | Histone-lysine N-methyltr | yes | no | 0.189 | 0.038 | 0.5 | 5e-38 | |
| O08550 | 2713 | Histone-lysine N-methyltr | no | no | 0.249 | 0.074 | 0.390 | 5e-37 |
| >sp|P0CB22|ATX2_ARATH Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana GN=ATX2 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1165 bits (3015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/813 (70%), Positives = 652/813 (80%), Gaps = 12/813 (1%)
Query: 1 MDCLKLSFSINNVDNDGYDYDEMVVLAASLDDCQELEPGDIIWAKLTGHAMWPAIVVDES 60
M+ L + F N+V DG DYDE+V+LAAS ++CQ+ EP DIIWAKLTGHAMWPAI+VDES
Sbjct: 278 MELLNMKFGTNDVVVDGQDYDELVILAASFEECQDFEPRDIIWAKLTGHAMWPAIIVDES 337
Query: 61 LIGDYKGLN-KISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKKPRFTQSL 119
+I KGLN KISGGRS+ VQFFGTHDFARI VKQ +SFLKGLLS LKCK+PRF +++
Sbjct: 338 VIVKRKGLNNKISGGRSVLVQFFGTHDFARIQVKQAVSFLKGLLSRSPLKCKQPRFEEAM 397
Query: 120 EEAKVYLSEQKLPRRMLQLQNAIRADDGENSWSQDEGSLGSGENCFKDERLQGTLGSIGI 179
EEAK+YL E KLP RM QLQ D E S +E S SG++ KD + +G
Sbjct: 398 EEAKMYLKEYKLPGRMDQLQKVADTDCSERINSGEEDSSNSGDDYTKDGEVWLRPTELGD 457
Query: 180 SPYVFGDLQILSLGKIVKDSEYFQDDRFIWPEGYTAVRKFTSLADPRVCNSYKMEVLRDT 239
+ GDLQI++LG+IV DSE+F+D + WPEGYTA RKF SL DP YKMEVLRD
Sbjct: 458 CLHRIGDLQIINLGRIVTDSEFFKDSKHTWPEGYTATRKFISLKDPNASAMYKMEVLRDA 517
Query: 240 ESKIRPLFRVTLDNGEQFTGSTPSTCWSKICMKIREGQNNTSDDFSAEGAAEKISESGSD 299
ESK RP+FRVT ++GEQF G TPS CW+KI +I++ Q SD+ G E + ESG+D
Sbjct: 518 ESKTRPVFRVTTNSGEQFKGDTPSACWNKIYNRIKKIQI-ASDNPDVLG--EGLHESGTD 574
Query: 300 MFGFSNPEVMKLILGLTKSRPTSKSSLCKLTS-KYRDLPGGYRPVRVDWKDLDKCSVCHM 358
MFGFSNPEV KLI GL +SRP SK S K +S KY+D P GYRPVRV+WKDLDKC+VCHM
Sbjct: 575 MFGFSNPEVDKLIQGLLQSRPPSKVSQRKYSSGKYQDHPTGYRPVRVEWKDLDKCNVCHM 634
Query: 359 DEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGAPEPPPPCCLCPVVGGA 418
DEEY+NNLFLQCDKCRMMVH RCYG+LEP NG+LWLCNLCRP A + PP CCLCPVVGGA
Sbjct: 635 DEEYENNLFLQCDKCRMMVHTRCYGQLEPHNGILWLCNLCRPVALDIPPRCCLCPVVGGA 694
Query: 419 MKPTTDGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDRWKLLCSICGVSYGACIQC 478
MKPTTDGRWAHLACAIWIPETCL DVK+MEPIDG+ +VSKDRWKLLCSICGVSYGACIQC
Sbjct: 695 MKPTTDGRWAHLACAIWIPETCLLDVKKMEPIDGVKKVSKDRWKLLCSICGVSYGACIQC 754
Query: 479 SNTTCRVAYHPLCARAAGLCVELEDEDRLNLLSLDEDDEDQCIRLLSFCKKHKQPLNDRL 538
SN TCRVAYHPLCARAAGLCVEL DEDRL LLS+D+D+ DQCIRLLSFCK+H+Q N L
Sbjct: 755 SNNTCRVAYHPLCARAAGLCVELADEDRLFLLSMDDDEADQCIRLLSFCKRHRQTSNYHL 814
Query: 539 AVDERLVQVTRRCCDYIPPSNPSGCARSEPYNYFGRRGRKEPEALAAASLKRLFVENQPY 598
E +++ +Y+PP NPSGCAR+EPYNY GRRGRKEPEALA AS KRLFVENQPY
Sbjct: 815 ET-EYMIKPAHNIAEYLPPPNPSGCARTEPYNYLGRRGRKEPEALAGASSKRLFVENQPY 873
Query: 599 LVGGYCQNGLSGNTLPSIRVIGSKFSFSLHRDAPNFLSMADKYKHMKETFRKRLAFGKSG 658
+VGGY ++ S R+ GSK S N LSMA+KY MKET+RKRLAFGKSG
Sbjct: 874 IVGGYSRHEFSTYE----RIYGSKMSQIT--TPSNILSMAEKYTFMKETYRKRLAFGKSG 927
Query: 659 IHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDA 718
IHGFGIFAK PHRAGDMVIEYTGELVRP IAD+REH IYNS+VGAGTYMFRID+ERVIDA
Sbjct: 928 IHGFGIFAKLPHRAGDMVIEYTGELVRPPIADKREHLIYNSMVGAGTYMFRIDNERVIDA 987
Query: 719 TRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDEQLAC 778
TR GSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRD+ +WEELTYDYRFFSIDE+LAC
Sbjct: 988 TRTGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDVAKWEELTYDYRFFSIDERLAC 1047
Query: 779 YCGFPRCRGVVNDTEAEEQVAKLYAPRSELIDW 811
YCGFPRCRGVVNDTEAEE+ A ++A R EL +W
Sbjct: 1048 YCGFPRCRGVVNDTEAEERQANIHASRCELKEW 1080
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Histone methyltransferase. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3 |
| >sp|Q9C5X4|ATX1_ARATH Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5 OS=Arabidopsis thaliana GN=ATX5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4 OS=Arabidopsis thaliana GN=ATX4 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q9M364|ATX3_ARATH Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana GN=ATX3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q24742|TRX_DROVI Histone-lysine N-methyltransferase trithorax OS=Drosophila virilis GN=trx PE=3 SV=1 | Back alignment and function description |
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| >sp|P20659|TRX_DROME Histone-lysine N-methyltransferase trithorax OS=Drosophila melanogaster GN=trx PE=1 SV=4 | Back alignment and function description |
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| >sp|Q03164|MLL1_HUMAN Histone-lysine N-methyltransferase MLL OS=Homo sapiens GN=MLL PE=1 SV=5 | Back alignment and function description |
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| >sp|P55200|MLL1_MOUSE Histone-lysine N-methyltransferase MLL OS=Mus musculus GN=Mll PE=1 SV=3 | Back alignment and function description |
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| >sp|O08550|MLL4_MOUSE Histone-lysine N-methyltransferase MLL4 OS=Mus musculus GN=Wbp7 PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | ||||||
| 255573673 | 1103 | phd finger protein, putative [Ricinus co | 0.998 | 0.737 | 0.807 | 0.0 | |
| 224065044 | 1014 | SET domain protein [Populus trichocarpa] | 0.980 | 0.786 | 0.783 | 0.0 | |
| 224128834 | 1050 | SET domain protein [Populus trichocarpa] | 0.953 | 0.739 | 0.755 | 0.0 | |
| 225433774 | 1084 | PREDICTED: histone-lysine N-methyltransf | 1.0 | 0.750 | 0.749 | 0.0 | |
| 297745169 | 1068 | unnamed protein product [Vitis vinifera] | 0.980 | 0.747 | 0.742 | 0.0 | |
| 449441169 | 1036 | PREDICTED: histone-lysine N-methyltransf | 0.997 | 0.783 | 0.744 | 0.0 | |
| 449496792 | 1095 | PREDICTED: LOW QUALITY PROTEIN: histone- | 0.997 | 0.741 | 0.741 | 0.0 | |
| 342209882 | 1089 | trithorax-like protein [Phaseolus vulgar | 0.988 | 0.739 | 0.736 | 0.0 | |
| 356568903 | 1088 | PREDICTED: histone-lysine N-methyltransf | 0.991 | 0.741 | 0.730 | 0.0 | |
| 356526623 | 1088 | PREDICTED: histone-lysine N-methyltransf | 0.988 | 0.739 | 0.725 | 0.0 |
| >gi|255573673|ref|XP_002527758.1| phd finger protein, putative [Ricinus communis] gi|223532845|gb|EEF34619.1| phd finger protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1363 bits (3528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/822 (80%), Positives = 732/822 (89%), Gaps = 9/822 (1%)
Query: 1 MDCLKLSFSINNVDNDGYDYDEMVVLAASLDDCQELEPGDIIWAKLTGHAMWPAIVVDES 60
M+ L L+FSI + D D YDYDEMV LAA LDDCQ+LEPGDIIWAKLTGHAMWPAIVVD+S
Sbjct: 283 MEQLNLTFSIKSADGDCYDYDEMVALAAVLDDCQDLEPGDIIWAKLTGHAMWPAIVVDQS 342
Query: 61 LIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKKPRFTQSLE 120
LIG+ KGLNKISG RS+ VQFFGTHDFARI KQVISFLKGLLSSFHLKC+KP FT+SLE
Sbjct: 343 LIGERKGLNKISGERSVFVQFFGTHDFARIKPKQVISFLKGLLSSFHLKCRKPHFTRSLE 402
Query: 121 EAKVYLSEQKLPRRMLQLQNAIRADDGENSWSQDEGSLGSGENCFKDERLQGTLGSIGIS 180
EAK+YLSEQKLPRRMLQLQN++ AD +++ S+DEGS S E+C +ER+Q L + S
Sbjct: 403 EAKMYLSEQKLPRRMLQLQNSMNADSCKSASSEDEGSSDSSEDCIDNERIQRILRGLETS 462
Query: 181 PYVFGDLQILSLGKIVKDSEYFQDDRFIWPEGYTAVRKFTSLADPRVCNSYKMEVLRDTE 240
PYV GDLQI+SLGKIVKDSEYFQ+DRFIWPEGYTA+RKFTS+ DP C YKMEVLRD E
Sbjct: 463 PYVIGDLQIISLGKIVKDSEYFQNDRFIWPEGYTALRKFTSVTDPSACTIYKMEVLRDAE 522
Query: 241 SKIRPLFRVTLDNGEQFTGSTPSTCWSKICMKIREGQNNTSDDFSAEGAAEKISESGSDM 300
SKIRPLFRVTLDNGEQ GSTP CW KI +IR+ Q + SD FSAEG E+ +SGSDM
Sbjct: 523 SKIRPLFRVTLDNGEQIRGSTPCACWDKIYRRIRKLQYSASDGFSAEGVVERFYKSGSDM 582
Query: 301 FGFSNPEVMKLILGLTKSRPTSKSSLCKLTS-KYRDLPGGYRPVRVDWKDLDKCSVCHMD 359
FGFSNPEVMKLI GL+KSR SK S+CKLTS +Y+DLP GYRPVRVDWKDLDKC+VCHMD
Sbjct: 583 FGFSNPEVMKLIKGLSKSRLYSKMSICKLTSERYQDLPVGYRPVRVDWKDLDKCNVCHMD 642
Query: 360 EEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGAPEPPPPCCLCPVVGGAM 419
EEY+NNLFLQCDKCRMMVHARCYGELEPV+GVLW CNLCRPGAP+ PPCCLCPV+GGAM
Sbjct: 643 EEYENNLFLQCDKCRMMVHARCYGELEPVDGVLWYCNLCRPGAPD-SPPCCLCPVIGGAM 701
Query: 420 KPTTDGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDRWKLLCSICGVSYGACIQCS 479
KPTTDGRWAHLACAIWIPETCL+D+KRMEPIDGLNR++KDRWKLLCSICGV+YGACIQCS
Sbjct: 702 KPTTDGRWAHLACAIWIPETCLSDIKRMEPIDGLNRINKDRWKLLCSICGVAYGACIQCS 761
Query: 480 NTTCRVAYHPLCARAAGLCVELEDEDRLNLLSLDEDDEDQCIRLLSFCKKHKQPLNDRLA 539
N TCRVAYHPLCARAAGLCVELEDE+RL+LLS+D+D EDQCIRLLSFCK+HKQP N+R
Sbjct: 762 NNTCRVAYHPLCARAAGLCVELEDEERLHLLSVDDDVEDQCIRLLSFCKRHKQPSNERPV 821
Query: 540 VDERLVQVTRRCCDYIPPSNPSGCARSEPYNYFGRRGRKEPEALAAASLKRLFVENQPYL 599
+ER+ ++T R DYIPP NPSGCARSEPYNYFGRRGRKEPEALAAASLKRLFVENQPYL
Sbjct: 822 TEERIGRITHRYSDYIPPCNPSGCARSEPYNYFGRRGRKEPEALAAASLKRLFVENQPYL 881
Query: 600 VGGYCQNGLSGNTLPSIRVIGSKFSFSL------HRDAP-NFLSMADKYKHMKETFRKRL 652
VGGYCQ+ SG TLPS V GS+FS +L DAP N +SMA+KY++M++TFRKRL
Sbjct: 882 VGGYCQHESSGITLPSNGVEGSRFSSNLQWLKTSQLDAPNNIISMAEKYEYMRQTFRKRL 941
Query: 653 AFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD 712
AFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRP IADRREHFIYNSLVGAGTYMFRI+D
Sbjct: 942 AFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPPIADRREHFIYNSLVGAGTYMFRIND 1001
Query: 713 ERVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 772
ERVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIK+WEELTYDYRFFSI
Sbjct: 1002 ERVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKRWEELTYDYRFFSI 1061
Query: 773 DEQLACYCGFPRCRGVVNDTEAEEQVAKLYAPRSELIDWRGD 814
DEQLACYCGFPRCRGVVND EAEEQVAKLYAPR+ELID++G+
Sbjct: 1062 DEQLACYCGFPRCRGVVNDIEAEEQVAKLYAPRNELIDFKGE 1103
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224065044|ref|XP_002301643.1| SET domain protein [Populus trichocarpa] gi|222843369|gb|EEE80916.1| SET domain protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224128834|ref|XP_002320433.1| SET domain protein [Populus trichocarpa] gi|222861206|gb|EEE98748.1| SET domain protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225433774|ref|XP_002268621.1| PREDICTED: histone-lysine N-methyltransferase ATX2-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297745169|emb|CBI39161.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449441169|ref|XP_004138356.1| PREDICTED: histone-lysine N-methyltransferase ATX2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449496792|ref|XP_004160228.1| PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ATX2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|342209882|gb|AEL16988.1| trithorax-like protein [Phaseolus vulgaris] | Back alignment and taxonomy information |
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| >gi|356568903|ref|XP_003552647.1| PREDICTED: histone-lysine N-methyltransferase ATX2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356526623|ref|XP_003531916.1| PREDICTED: histone-lysine N-methyltransferase ATX2-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | ||||||
| TAIR|locus:2198743 | 1083 | ATX2 "trithorax-like protein 2 | 0.982 | 0.738 | 0.670 | 4.7e-293 | |
| TAIR|locus:2065923 | 1062 | ATX1 "homologue of trithorax" | 0.975 | 0.747 | 0.648 | 1.5e-287 | |
| TAIR|locus:2132912 | 1027 | SDG16 "SET domain protein 16" | 0.513 | 0.407 | 0.317 | 1.3e-63 | |
| TAIR|locus:2178446 | 1043 | SDG29 "AT5G53430" [Arabidopsis | 0.522 | 0.407 | 0.317 | 2.1e-63 | |
| TAIR|locus:2076755 | 1018 | SDG14 "SET domain protein 14" | 0.242 | 0.193 | 0.419 | 1.1e-56 | |
| ZFIN|ZDB-GENE-060503-376 | 2863 | mll4a "myeloid/lymphoid or mix | 0.200 | 0.056 | 0.485 | 2.1e-42 | |
| UNIPROTKB|I3L895 | 323 | MLL "Uncharacterized protein" | 0.189 | 0.476 | 0.5 | 3e-42 | |
| UNIPROTKB|J9NZ02 | 2194 | RBM42 "Uncharacterized protein | 0.189 | 0.070 | 0.506 | 2.5e-40 | |
| UNIPROTKB|F1NET5 | 3958 | MLL "Uncharacterized protein" | 0.189 | 0.038 | 0.5 | 3.8e-40 | |
| ZFIN|ZDB-GENE-080521-1 | 3772 | mll4b "myeloid/lymphoid or mix | 0.189 | 0.040 | 0.506 | 5.6e-40 |
| TAIR|locus:2198743 ATX2 "trithorax-like protein 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2814 (995.6 bits), Expect = 4.7e-293, P = 4.7e-293
Identities = 546/814 (67%), Positives = 619/814 (76%)
Query: 1 MDCLKLSFSINNVDNDGYDYDEMVVLAASLDDCQELEPGDIIWAKLTGHAMWPAIVVDES 60
M+ L + F N+V DG DYDE+V+LAAS ++CQ+ EP DIIWAKLTGHAMWPAI+VDES
Sbjct: 278 MELLNMKFGTNDVVVDGQDYDELVILAASFEECQDFEPRDIIWAKLTGHAMWPAIIVDES 337
Query: 61 LIGDYKGLN-KISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKKPRFTQSL 119
+I KGLN KISGGRS+ VQFFGTHDFARI VKQ +SFLKGLLS LKCK+PRF +++
Sbjct: 338 VIVKRKGLNNKISGGRSVLVQFFGTHDFARIQVKQAVSFLKGLLSRSPLKCKQPRFEEAM 397
Query: 120 EEAKVYLSEQKLPRRMLQLQNAIRADDGENSWSQDEGSLGSGENCFKDERLQGTLGSIGI 179
EEAK+YL E KLP RM QLQ D E S +E S SG++ KD + +G
Sbjct: 398 EEAKMYLKEYKLPGRMDQLQKVADTDCSERINSGEEDSSNSGDDYTKDGEVWLRPTELGD 457
Query: 180 SPYVFGDLQILSLGKIVKDSEYFQDDRFIWPEGYTAVRKFTSLADPRVCNSYKMEVLRDT 239
+ GDLQI++LG+IV DSE+F+D + WPEGYTA RKF SL DP YKMEVLRD
Sbjct: 458 CLHRIGDLQIINLGRIVTDSEFFKDSKHTWPEGYTATRKFISLKDPNASAMYKMEVLRDA 517
Query: 240 ESKIRPLFRVTLDNGEQFTGSTPSTCWSKICMKIREGQNNTSDDFSAEGAAEKISESGSD 299
ESK RP+FRVT ++GEQF G TPS CW+KI +I++ Q SD+ G E + ESG+D
Sbjct: 518 ESKTRPVFRVTTNSGEQFKGDTPSACWNKIYNRIKKIQI-ASDNPDVLG--EGLHESGTD 574
Query: 300 MFGFSNPEVMKLILGLTKSRP-XXXXXXXXXXXXYRDLPGGYRPVRVDWKDLDKCSVCHM 358
MFGFSNPEV KLI GL +SRP Y+D P GYRPVRV+WKDLDKC+VCHM
Sbjct: 575 MFGFSNPEVDKLIQGLLQSRPPSKVSQRKYSSGKYQDHPTGYRPVRVEWKDLDKCNVCHM 634
Query: 359 DEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLXXXXXXXXXXXXXXXXVVGGA 418
DEEY+NNLFLQCDKCRMMVH RCYG+LEP NG+LWLCNL VVGGA
Sbjct: 635 DEEYENNLFLQCDKCRMMVHTRCYGQLEPHNGILWLCNLCRPVALDIPPRCCLCPVVGGA 694
Query: 419 MKPTTDGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDRWKLLCSICGVSYGACIQC 478
MKPTTDGRWAHLACAIWIPETCL DVK+MEPIDG+ +VSKDRWKLLCSICGVSYGACIQC
Sbjct: 695 MKPTTDGRWAHLACAIWIPETCLLDVKKMEPIDGVKKVSKDRWKLLCSICGVSYGACIQC 754
Query: 479 SNTTCRVAYHPLCARAAGLCVXXXXXXXXXXXXXXXXXXXQCIRLLSFCKKHKQPLNDRL 538
SN TCRVAYHPLCARAAGLCV QCIRLLSFCK+H+Q N L
Sbjct: 755 SNNTCRVAYHPLCARAAGLCVELADEDRLFLLSMDDDEADQCIRLLSFCKRHRQTSNYHL 814
Query: 539 AVDERLVQVTRRCCDYIPPSNPSGCARSEPYNYFGRRGRKEPEALAAASLKRLFVENQPY 598
E +++ +Y+PP NPSGCAR+EPYNY GRRGRKEPEALA AS KRLFVENQPY
Sbjct: 815 ET-EYMIKPAHNIAEYLPPPNPSGCARTEPYNYLGRRGRKEPEALAGASSKRLFVENQPY 873
Query: 599 LVGGYCQNGLSGNTLPSIRVIGSKFSFSLHRDAP-NFLSMADKYKHMKETFRKRLAFGKS 657
+VGGY ++ S T R+ GSK S P N LSMA+KY MKET+RKRLAFGKS
Sbjct: 874 IVGGYSRHEFS--TYE--RIYGSKMS---QITTPSNILSMAEKYTFMKETYRKRLAFGKS 926
Query: 658 GIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVID 717
GIHGFGIFAK PHRAGDMVIEYTGELVRP IAD+REH IYNS+VGAGTYMFRID+ERVID
Sbjct: 927 GIHGFGIFAKLPHRAGDMVIEYTGELVRPPIADKREHLIYNSMVGAGTYMFRIDNERVID 986
Query: 718 ATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDEQLA 777
ATR GSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRD+ +WEELTYDYRFFSIDE+LA
Sbjct: 987 ATRTGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDVAKWEELTYDYRFFSIDERLA 1046
Query: 778 CYCGFPRCRGVVNDTEAEEQVAKLYAPRSELIDW 811
CYCGFPRCRGVVNDTEAEE+ A ++A R EL +W
Sbjct: 1047 CYCGFPRCRGVVNDTEAEERQANIHASRCELKEW 1080
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| TAIR|locus:2065923 ATX1 "homologue of trithorax" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2132912 SDG16 "SET domain protein 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178446 SDG29 "AT5G53430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2076755 SDG14 "SET domain protein 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060503-376 mll4a "myeloid/lymphoid or mixed-lineage leukemia 4a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3L895 MLL "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NZ02 RBM42 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NET5 MLL "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-080521-1 mll4b "myeloid/lymphoid or mixed-lineage leukemia 4b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P0CB22 | ATX2_ARATH | 2, ., 1, ., 1, ., 4, 3 | 0.7060 | 0.9840 | 0.7396 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.1.1.43 | 0.946 |
| 3rd Layer | 2.1.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
 | SDG937 | SET domain protein (1014 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 814 | |||
| pfam13832 | 109 | pfam13832, zf-HC5HC2H_2, PHD-zinc-finger like doma | 9e-44 | |
| COG5141 | 669 | COG5141, COG5141, PHD zinc finger-containing prote | 3e-36 | |
| smart00317 | 124 | smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest | 5e-36 | |
| pfam00856 | 113 | pfam00856, SET, SET domain | 1e-32 | |
| COG2940 | 480 | COG2940, COG2940, Proteins containing SET domain [ | 3e-25 | |
| pfam13771 | 89 | pfam13771, zf-HC5HC2H, PHD-like zinc-binding domai | 5e-25 | |
| pfam05964 | 54 | pfam05964, FYRN, F/Y-rich N-terminus | 4e-13 | |
| cd05162 | 87 | cd05162, PWWP, The PWWP domain, named for a conser | 6e-13 | |
| cd05838 | 95 | cd05838, WHSC1_related, The PWWP domain was first | 7e-12 | |
| pfam05965 | 84 | pfam05965, FYRC, F/Y rich C-terminus | 3e-11 | |
| smart00542 | 86 | smart00542, FYRC, FY-rich domain, C-terminal regio | 2e-10 | |
| smart00293 | 63 | smart00293, PWWP, domain with conserved PWWP motif | 4e-10 | |
| pfam00855 | 74 | pfam00855, PWWP, PWWP domain | 2e-08 | |
| cd05834 | 83 | cd05834, HDGF_related, The PWWP domain is an essen | 2e-08 | |
| pfam13831 | 33 | pfam13831, PHD_2, PHD-finger | 3e-07 | |
| cd05837 | 110 | cd05837, MSH6_like, The PWWP domain is present in | 7e-07 | |
| cd05840 | 93 | cd05840, SPBC215_ISWI_like, The PWWP domain is a c | 9e-07 | |
| cd05836 | 86 | cd05836, N_Pac_NP60, The PWWP domain is an essenti | 2e-06 | |
| smart00541 | 44 | smart00541, FYRN, FY-rich domain, N-terminal regio | 5e-05 | |
| pfam00628 | 51 | pfam00628, PHD, PHD-finger | 2e-04 | |
| smart00249 | 47 | smart00249, PHD, PHD zinc finger | 9e-04 | |
| cd05835 | 87 | cd05835, Dnmt3b_related, The PWWP domain is an ess | 0.001 |
| >gnl|CDD|206003 pfam13832, zf-HC5HC2H_2, PHD-zinc-finger like domain | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 9e-44
Identities = 56/124 (45%), Positives = 77/124 (62%), Gaps = 15/124 (12%)
Query: 407 PPCCLCPVVGGAMKPTTDGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDRWKLLCS 466
CCLCP+ GGA+K TTDGRW H+ CAI++PE + MEPID ++R+ K+RWKL C
Sbjct: 1 AECCLCPLRGGALKKTTDGRWVHVLCAIFVPEVRFGNGATMEPID-VSRIPKERWKLKCC 59
Query: 467 ICGVSYGACIQCSNTTCRVAYHPLCARAAGLCVELEDEDRLNLLSLDEDDEDQCIRLLSF 526
C GACIQCS C+ ++H CARAAG+ +E+ED L ++++
Sbjct: 60 FCKKRSGACIQCSYGRCQTSFHVTCARAAGVYMEIEDWPNLQ--------------VIAY 105
Query: 527 CKKH 530
C+KH
Sbjct: 106 CQKH 109
|
Length = 109 |
| >gnl|CDD|227470 COG5141, COG5141, PHD zinc finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
| >gnl|CDD|216155 pfam00856, SET, SET domain | Back alignment and domain information |
|---|
| >gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|222368 pfam13771, zf-HC5HC2H, PHD-like zinc-binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|218830 pfam05964, FYRN, F/Y-rich N-terminus | Back alignment and domain information |
|---|
| >gnl|CDD|99894 cd05162, PWWP, The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids | Back alignment and domain information |
|---|
| >gnl|CDD|99899 cd05838, WHSC1_related, The PWWP domain was first identified in the WHSC1 (Wolf-Hirschhorn syndrome candidate 1) protein, a protein implicated in Wolf-Hirschhorn syndrome (WHS) | Back alignment and domain information |
|---|
| >gnl|CDD|218831 pfam05965, FYRC, F/Y rich C-terminus | Back alignment and domain information |
|---|
| >gnl|CDD|197781 smart00542, FYRC, FY-rich domain, C-terminal region | Back alignment and domain information |
|---|
| >gnl|CDD|214603 smart00293, PWWP, domain with conserved PWWP motif | Back alignment and domain information |
|---|
| >gnl|CDD|216154 pfam00855, PWWP, PWWP domain | Back alignment and domain information |
|---|
| >gnl|CDD|99895 cd05834, HDGF_related, The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF | Back alignment and domain information |
|---|
| >gnl|CDD|222406 pfam13831, PHD_2, PHD-finger | Back alignment and domain information |
|---|
| >gnl|CDD|99898 cd05837, MSH6_like, The PWWP domain is present in MSH6, a mismatch repair protein homologous to bacterial MutS | Back alignment and domain information |
|---|
| >gnl|CDD|99901 cd05840, SPBC215_ISWI_like, The PWWP domain is a component of the S | Back alignment and domain information |
|---|
| >gnl|CDD|99897 cd05836, N_Pac_NP60, The PWWP domain is an essential part of the cytokine-like nuclear factor n-pac protein, or NP60, which enhances the activity of MAP2K4 and MAP2K6 kinases to phosphorylate p38-alpha | Back alignment and domain information |
|---|
| >gnl|CDD|128814 smart00541, FYRN, FY-rich domain, N-terminal region | Back alignment and domain information |
|---|
| >gnl|CDD|201356 pfam00628, PHD, PHD-finger | Back alignment and domain information |
|---|
| >gnl|CDD|214584 smart00249, PHD, PHD zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|99896 cd05835, Dnmt3b_related, The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| KOG1080 | 1005 | consensus Histone H3 (Lys4) methyltransferase comp | 100.0 | |
| KOG0956 | 900 | consensus PHD finger protein AF10 [General functio | 100.0 | |
| KOG0954 | 893 | consensus PHD finger protein [General function pre | 100.0 | |
| COG5141 | 669 | PHD zinc finger-containing protein [General functi | 100.0 | |
| KOG4442 | 729 | consensus Clathrin coat binding protein/Huntingtin | 100.0 | |
| KOG0955 | 1051 | consensus PHD finger protein BR140/LIN-49 [General | 100.0 | |
| KOG0957 | 707 | consensus PHD finger protein [General function pre | 99.97 | |
| KOG1079 | 739 | consensus Transcriptional repressor EZH1 [Transcri | 99.94 | |
| PF13832 | 110 | zf-HC5HC2H_2: PHD-zinc-finger like domain | 99.91 | |
| cd05834 | 83 | HDGF_related The PWWP domain is an essential part | 99.9 | |
| cd05836 | 86 | N_Pac_NP60 The PWWP domain is an essential part of | 99.9 | |
| cd05840 | 93 | SPBC215_ISWI_like The PWWP domain is a component o | 99.88 | |
| cd05838 | 95 | WHSC1_related The PWWP domain was first identified | 99.88 | |
| KOG1082 | 364 | consensus Histone H3 (Lys9) methyltransferase SUV3 | 99.88 | |
| cd05835 | 87 | Dnmt3b_related The PWWP domain is an essential com | 99.87 | |
| smart00317 | 116 | SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) | 99.87 | |
| cd05841 | 83 | BS69_related The PWWP domain is part of BS69 prote | 99.87 | |
| cd05162 | 87 | PWWP The PWWP domain, named for a conserved Pro-Tr | 99.87 | |
| PF00855 | 86 | PWWP: PWWP domain; InterPro: IPR000313 Upon charac | 99.84 | |
| smart00293 | 63 | PWWP domain with conserved PWWP motif. conservatio | 99.83 | |
| KOG1085 | 392 | consensus Predicted methyltransferase (contains a | 99.8 | |
| cd05837 | 110 | MSH6_like The PWWP domain is present in MSH6, a mi | 99.79 | |
| KOG1083 | 1306 | consensus Putative transcription factor ASH1/LIN-5 | 99.79 | |
| cd06080 | 80 | MUM1_like Mutated melanoma-associated antigen 1 (M | 99.71 | |
| cd05839 | 111 | BR140_related The PWWP domain is found in the BR14 | 99.71 | |
| PF05964 | 54 | FYRN: F/Y-rich N-terminus; InterPro: IPR003888 The | 99.7 | |
| PF13771 | 90 | zf-HC5HC2H: PHD-like zinc-binding domain | 99.63 | |
| PF05965 | 86 | FYRC: F/Y rich C-terminus; InterPro: IPR003889 The | 99.62 | |
| smart00542 | 86 | FYRC "FY-rich" domain, C-terminal region. is somet | 99.62 | |
| COG2940 | 480 | Proteins containing SET domain [General function p | 99.59 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 99.51 | |
| KOG1904 | 496 | consensus Transcription coactivator [Transcription | 99.5 | |
| PF00856 | 162 | SET: SET domain; InterPro: IPR001214 The SET domai | 99.43 | |
| smart00541 | 44 | FYRN "FY-rich" domain, N-terminal region. is somet | 99.38 | |
| PF13831 | 36 | PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A. | 99.17 | |
| KOG2589 | 453 | consensus Histone tail methylase [Chromatin struct | 98.91 | |
| KOG1081 | 463 | consensus Transcription factor NSD1 and related SE | 98.83 | |
| PF00628 | 51 | PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( | 97.68 | |
| smart00249 | 47 | PHD PHD zinc finger. The plant homeodomain (PHD) f | 97.6 | |
| KOG2461 | 396 | consensus Transcription factor BLIMP-1/PRDI-BF1, c | 97.58 | |
| KOG4323 | 464 | consensus Polycomb-like PHD Zn-finger protein [Gen | 97.18 | |
| KOG4323 | 464 | consensus Polycomb-like PHD Zn-finger protein [Gen | 97.0 | |
| KOG1084 | 375 | consensus Transcription factor TCF20 [Transcriptio | 96.96 | |
| PF15446 | 175 | zf-PHD-like: PHD/FYVE-zinc-finger like domain | 96.84 | |
| KOG1081 | 463 | consensus Transcription factor NSD1 and related SE | 96.84 | |
| KOG1244 | 336 | consensus Predicted transcription factor Requiem/N | 96.62 | |
| KOG1512 | 381 | consensus PHD Zn-finger protein [General function | 96.49 | |
| smart00508 | 26 | PostSET Cysteine-rich motif following a subset of | 96.35 | |
| KOG0825 | 1134 | consensus PHD Zn-finger protein [General function | 94.65 | |
| KOG4299 | 613 | consensus PHD Zn-finger protein [General function | 94.08 | |
| COG5034 | 271 | TNG2 Chromatin remodeling protein, contains PhD zi | 92.96 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 92.87 | |
| KOG1973 | 274 | consensus Chromatin remodeling protein, contains P | 92.8 | |
| PF08169 | 96 | RBB1NT: RBB1NT (NUC162) domain; InterPro: IPR01260 | 92.32 | |
| PF11717 | 55 | Tudor-knot: RNA binding activity-knot of a chromod | 91.66 | |
| smart00249 | 47 | PHD PHD zinc finger. The plant homeodomain (PHD) f | 90.65 | |
| smart00743 | 61 | Agenet Tudor-like domain present in plant sequence | 90.01 | |
| smart00333 | 57 | TUDOR Tudor domain. Domain of unknown function pre | 89.42 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 88.5 | |
| KOG0383 | 696 | consensus Predicted helicase [General function pre | 88.36 | |
| PF15057 | 124 | DUF4537: Domain of unknown function (DUF4537) | 87.24 | |
| PF00628 | 51 | PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( | 85.39 | |
| KOG0957 | 707 | consensus PHD finger protein [General function pre | 84.8 | |
| KOG1473 | 1414 | consensus Nucleosome remodeling factor, subunit NU | 84.03 | |
| PF07649 | 30 | C1_3: C1-like domain; InterPro: IPR011424 This sho | 83.27 | |
| KOG1044 | 670 | consensus Actin-binding LIM Zn-finger protein Lima | 83.07 | |
| KOG1512 | 381 | consensus PHD Zn-finger protein [General function | 82.73 | |
| KOG2084 | 482 | consensus Predicted histone tail methylase contain | 82.15 | |
| cd04508 | 48 | TUDOR Tudor domains are found in many eukaryotic o | 80.92 | |
| PF00130 | 53 | C1_1: Phorbol esters/diacylglycerol binding domain | 80.22 |
| >KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-65 Score=602.17 Aligned_cols=506 Identities=35% Similarity=0.624 Sum_probs=379.7
Q ss_pred CceecCChhHHHHHHHHHHHhhccCCCCccccccccccccccCccccCCCcHHHHHHHhhcCCCCCCCchhhhhccc-cc
Q 003510 255 EQFTGSTPSTCWSKICMKIREGQNNTSDDFSAEGAAEKISESGSDMFGFSNPEVMKLILGLTKSRPTSKSSLCKLTS-KY 333 (814)
Q Consensus 255 ~~~~~~s~~~~W~~i~k~i~~~~~~~~~~~~~~~~~~~~~~sG~~~FGls~p~v~~li~~Lp~a~~~~k~~~~k~~~-~~ 333 (814)
..+-..++..+|...+....+.....+..... .....-++..+|++........+........-+....++-.. ..
T Consensus 480 ~~~~~~~~~~~~k~~~~e~~k~~~~~~~~~k~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~s~~~~~~~s~~~~ 556 (1005)
T KOG1080|consen 480 RVFHMLRYSVKKKKFLSEWERHTGATAKIWKD---SSRVKDELLPLPKWVESRGRSIMNTYNSEKPKSIVLMGKTSVQRM 556 (1005)
T ss_pred eeecccCcchhhhhcccchhhhhccccccccc---ccccccccccchhhhhhccccccccccccCCcchhhhccchhhhh
Confidence 34778889999999988887766665433222 112234666777777777655566555555544444443333 23
Q ss_pred cCCCCCCCCccccccCCCccccccCCcccCCCceEEccccccccccccccccccCCCCceeeccccCCCCCCCCCceecC
Q 003510 334 RDLPGGYRPVRVDWKDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGAPEPPPPCCLCP 413 (814)
Q Consensus 334 ~~lp~~~~~~~~~~~~~~~C~VC~~~~~~~~n~iv~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~~~~~~~~C~lC~ 413 (814)
+..+..+.+....|.+.+.|.+|.+.+.+..|.++.|+.|+..||+.|||...++.+..|+|+.|... .....|+||+
T Consensus 557 ~~~~~~~~~~~l~~~~t~~c~~~~~~~~~~~n~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~~~~~~--~~~r~~~l~~ 634 (1005)
T KOG1080|consen 557 LLELIEKREPRLSKWTTERCAVCRDDEDWEKNVSIICDRCTRSVHSECYGNLKSYDGTSWVCDSCETL--DIKRSCCLCP 634 (1005)
T ss_pred cCcccccchhhhcCCCcccccccccccccccceeeeeccccccCCCcccccCCCCCCCcchhhccccc--cCCchhhhcc
Confidence 44455566677777777899999999999999999999999999999999999999999999999964 4457899999
Q ss_pred CCCCCceecCCCcchhhhhhccccceEEccCCCcccccccccchhcccCccceeeCCccceeEecCCCCcCcccchhhHh
Q 003510 414 VVGGAMKPTTDGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDRWKLLCSICGVSYGACIQCSNTTCRVAYHPLCAR 493 (814)
Q Consensus 414 ~~~Galk~t~~~~WvH~~Ca~~~pe~~~~~~~~~~~v~~~~~~~~~~~~~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~ 493 (814)
.+||||++++.|+|+|+-||.|.|++.+.++..|+|..++..++...+...|.+ .|.|.||. .|...||.+||.
T Consensus 635 ~~g~al~p~d~gr~~~~e~a~~~~e~~~~~~~~~~p~~~~~~~p~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~a~ 708 (1005)
T KOG1080|consen 635 VKGGALKPTDEGRWVHVECAWFRPEVCLASPERMEPAVGTFKIPALSFLKICFI----HGSCRQCC--KCETGSHAMCAS 708 (1005)
T ss_pred ccCcccCCCCccchhhhhchhccccccCCCccCCCCcccccccCccchhhhccc----cccccccc--hhhhcceehhhc
Confidence 999999999999999999999999999999999999999999999998888888 68899998 999999999999
Q ss_pred hcCceEEeeccccc----------------cccccCCCcccccccccccccccCCCCcchhhhhhhhhhhhccccCCCCC
Q 003510 494 AAGLCVELEDEDRL----------------NLLSLDEDDEDQCIRLLSFCKKHKQPLNDRLAVDERLVQVTRRCCDYIPP 557 (814)
Q Consensus 494 ~~g~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~C~~H~~~~~~~~~~~~~~~~~~~~~s~~~p~ 557 (814)
.+|+.++...-... .++.++........+..+++.+|+....... +.. .++.+
T Consensus 709 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~k~~~~~g~~~~-~~~---------~~~~~- 777 (1005)
T KOG1080|consen 709 RAGYIMEAVSLEEVSQQTTSYVKEDGPGPDSVLKVNTPSGKFGAENLSQNKKSRTDGVRLV-LTY---------KEYAP- 777 (1005)
T ss_pred CccChhhhhhhhhhhhhhhhhhhhccCCcccceeecCccccccccchhhhhhccccccccc-ccc---------ccccc-
Confidence 99987654321111 0111111111111222233333332111100 000 11112
Q ss_pred CCCCcccccCccccc--ccCCCCchhHHHHhhcccccccCCcccccccccCCCCCCCCCcccccccccccccccCCCCcc
Q 003510 558 SNPSGCARSEPYNYF--GRRGRKEPEALAAASLKRLFVENQPYLVGGYCQNGLSGNTLPSIRVIGSKFSFSLHRDAPNFL 635 (814)
Q Consensus 558 ~npsGcaRsEp~~~~--~rr~rk~p~~~~~a~~kr~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (814)
-+.-|+|.+|++.+ ....+..+...+.+..+++..++.++..++..++.+.... +..+..++.+ -..+...
T Consensus 778 -~~~~~~~~~~~~~~~~~s~~~~~~~~r~~~~~~~~~~~s~~~~~s~~~s~~~s~~~----rl~q~rl~a~--~~~~~~~ 850 (1005)
T KOG1080|consen 778 -LREIKSRAEPLNRIDFSSEARCRSESRSDNSKSPLAEESESDITSGGSSHDLSAEE----RLNQFRLSAS--FTASFIL 850 (1005)
T ss_pred -cccchhcccCCcccCccccccccchhhcccccccccccccccccccccccchhHHh----hhHHHHhhhh--ccccccc
Confidence 22346777887653 2223333344455556677777888777666666543211 1111111111 1223456
Q ss_pred chhhhhHHHhhcccee-EEEEEecccCeeEEeeecCCCCCeEEeecCcccCHhHHhhhHHHHhhcccCCceeEEEcCCce
Q 003510 636 SMADKYKHMKETFRKR-LAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDER 714 (814)
Q Consensus 636 ~~~~~~~~l~~~~~~~-~~v~~s~~~G~GvfA~~~i~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~ 714 (814)
.+++.++.++..++++ |.|++|.||||||||+++|.+||||+||+||+|++.+++.||.+ |......++|+|++|++.
T Consensus 851 ~~~~~~~~~~~~~rkk~~~F~~s~iH~wglfa~~~i~~~dmViEY~Ge~vR~~iad~RE~~-Y~~~gi~~sYlfrid~~~ 929 (1005)
T KOG1080|consen 851 DEAEVLRYNQLKFRKKYVKFGRSGIHGWGLFAMENIAAGDMVIEYRGELVRSSIADLREAR-YERMGIGDSYLFRIDDEV 929 (1005)
T ss_pred chHHHHHHHHHhhhhhhhccccccccccceeeccCccccceEEEeeceehhhhHHHHHHHH-HhccCcccceeeecccce
Confidence 7788888888888755 99999999999999999999999999999999999999999985 777655789999999999
Q ss_pred EEeccccCCccccccCCCCCCeeEEEEEECCeeEEEEEEcCCCCCCCeeeEeCCCCCCCCCeeeeeCCCCCccccC
Q 003510 715 VIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDEQLACYCGFPRCRGVVN 790 (814)
Q Consensus 715 ~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~C~Cg~~~Cr~~~~ 790 (814)
|||||.+||+||||||||+|||+++++.|+|..+|+|||.|+|.+||||||||.|+.++++++|+||+++|||+||
T Consensus 930 ViDAtk~gniAr~InHsC~PNCyakvi~V~g~~~IvIyakr~I~~~EElTYDYkF~~e~~kipClCgap~Crg~~n 1005 (1005)
T KOG1080|consen 930 VVDATKKGNIARFINHSCNPNCYAKVITVEGDKRIVIYSKRDIAAGEELTYDYKFPTEDDKIPCLCGAPNCRGFLN 1005 (1005)
T ss_pred EEeccccCchhheeecccCCCceeeEEEecCeeEEEEEEecccccCceeeeeccccccccccccccCCCccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
|
|
| >KOG0956 consensus PHD finger protein AF10 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0954 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG5141 PHD zinc finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0957 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1079 consensus Transcriptional repressor EZH1 [Transcription] | Back alignment and domain information |
|---|
| >PF13832 zf-HC5HC2H_2: PHD-zinc-finger like domain | Back alignment and domain information |
|---|
| >cd05834 HDGF_related The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF | Back alignment and domain information |
|---|
| >cd05836 N_Pac_NP60 The PWWP domain is an essential part of the cytokine-like nuclear factor n-pac protein, or NP60, which enhances the activity of MAP2K4 and MAP2K6 kinases to phosphorylate p38-alpha | Back alignment and domain information |
|---|
| >cd05840 SPBC215_ISWI_like The PWWP domain is a component of the S | Back alignment and domain information |
|---|
| >cd05838 WHSC1_related The PWWP domain was first identified in the WHSC1 (Wolf-Hirschhorn syndrome candidate 1) protein, a protein implicated in Wolf-Hirschhorn syndrome (WHS) | Back alignment and domain information |
|---|
| >KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >cd05835 Dnmt3b_related The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis | Back alignment and domain information |
|---|
| >smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
| >cd05841 BS69_related The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions | Back alignment and domain information |
|---|
| >cd05162 PWWP The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids | Back alignment and domain information |
|---|
| >PF00855 PWWP: PWWP domain; InterPro: IPR000313 Upon characterisation of WHSC1, a gene mapping to the Wolf-Hirschhornsyndrome critical region and at its C terminus similar to the Drosophila melanogaster ASH1/trithorax group proteins, a novel protein domain designated PWWP domain was identified [] | Back alignment and domain information |
|---|
| >smart00293 PWWP domain with conserved PWWP motif | Back alignment and domain information |
|---|
| >KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] | Back alignment and domain information |
|---|
| >cd05837 MSH6_like The PWWP domain is present in MSH6, a mismatch repair protein homologous to bacterial MutS | Back alignment and domain information |
|---|
| >KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] | Back alignment and domain information |
|---|
| >cd06080 MUM1_like Mutated melanoma-associated antigen 1 (MUM-1) is a melanoma-associated antigen (MAA) | Back alignment and domain information |
|---|
| >cd05839 BR140_related The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2 | Back alignment and domain information |
|---|
| >PF05964 FYRN: F/Y-rich N-terminus; InterPro: IPR003888 The "FY-rich" domain N-terminal region is sometimes closely juxtaposed with the C-terminal region (IPR003889 from INTERPRO), but sometimes is far distant | Back alignment and domain information |
|---|
| >PF13771 zf-HC5HC2H: PHD-like zinc-binding domain | Back alignment and domain information |
|---|
| >PF05965 FYRC: F/Y rich C-terminus; InterPro: IPR003889 The "FY-rich" domain C-terminal region is sometimes closely juxtaposed with the N-terminal region (IPR003888 from INTERPRO), but sometimes is far distant | Back alignment and domain information |
|---|
| >smart00542 FYRC "FY-rich" domain, C-terminal region | Back alignment and domain information |
|---|
| >COG2940 Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1904 consensus Transcription coactivator [Transcription] | Back alignment and domain information |
|---|
| >PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco | Back alignment and domain information |
|---|
| >smart00541 FYRN "FY-rich" domain, N-terminal region | Back alignment and domain information |
|---|
| >PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A | Back alignment and domain information |
|---|
| >KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] | Back alignment and domain information |
|---|
| >PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >smart00249 PHD PHD zinc finger | Back alignment and domain information |
|---|
| >KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] | Back alignment and domain information |
|---|
| >KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1084 consensus Transcription factor TCF20 [Transcription] | Back alignment and domain information |
|---|
| >PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain | Back alignment and domain information |
|---|
| >KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] | Back alignment and domain information |
|---|
| >KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] | Back alignment and domain information |
|---|
| >KOG1512 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >smart00508 PostSET Cysteine-rich motif following a subset of SET domains | Back alignment and domain information |
|---|
| >KOG0825 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4299 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >PF08169 RBB1NT: RBB1NT (NUC162) domain; InterPro: IPR012603 This domain is found N-terminal to the ARID/BRIGHT domain in DNA-binding proteins of the Retinoblastoma-binding protein 1 family [] | Back alignment and domain information |
|---|
| >PF11717 Tudor-knot: RNA binding activity-knot of a chromodomain ; PDB: 2EKO_A 2RO0_A 2RNZ_A 1WGS_A 3E9G_A 3E9F_A 2K3X_A 2K3Y_A 2EFI_A 2F5K_F | Back alignment and domain information |
|---|
| >smart00249 PHD PHD zinc finger | Back alignment and domain information |
|---|
| >smart00743 Agenet Tudor-like domain present in plant sequences | Back alignment and domain information |
|---|
| >smart00333 TUDOR Tudor domain | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG0383 consensus Predicted helicase [General function prediction only] | Back alignment and domain information |
|---|
| >PF15057 DUF4537: Domain of unknown function (DUF4537) | Back alignment and domain information |
|---|
| >PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG0957 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines | Back alignment and domain information |
|---|
| >KOG1044 consensus Actin-binding LIM Zn-finger protein Limatin involved in axon guidance [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1512 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2084 consensus Predicted histone tail methylase containing SET domain [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >cd04508 TUDOR Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains | Back alignment and domain information |
|---|
| >PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 814 | ||||
| 2w5y_A | 192 | Binary Complex Of The Mixed Lineage Leukaemia (Mll1 | 2e-37 | ||
| 3ope_A | 222 | Structural Basis Of Auto-Inhibitory Mechanism Of Hi | 1e-21 | ||
| 3ooi_A | 232 | Crystal Structure Of Human Histone-Lysine N-Methylt | 5e-18 | ||
| 2r3a_A | 300 | Methyltransferase Domain Of Human Suppressor Of Var | 6e-14 | ||
| 4fmu_A | 278 | Crystal Structure Of Methyltransferase Domain Of Hu | 6e-14 | ||
| 3hna_A | 287 | Crystal Structure Of Catalytic Domain Of Human Euch | 1e-12 | ||
| 2igq_A | 285 | Human Euchromatic Histone Methyltransferase 1 Lengt | 1e-12 | ||
| 3fpd_A | 261 | G9a-Like Protein Lysine Methyltransferase Inhibitio | 2e-12 | ||
| 3k5k_A | 283 | Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin | 4e-12 | ||
| 2o8j_A | 281 | Human Euchromatic Histone Methyltransferase 2 Lengt | 4e-12 | ||
| 4ij8_A | 165 | Crystal Structure Of The Complex Of Setd8 With Sam | 9e-12 | ||
| 4i51_A | 286 | Methyltransferase Domain Of Human Euchromatic Histo | 1e-11 | ||
| 1zkk_A | 167 | Crystal Structure Of Hset8 In Ternary Complex With | 3e-11 | ||
| 2bqz_A | 161 | Crystal Structure Of A Ternary Complex Of The Human | 3e-11 | ||
| 3f9z_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 7e-11 | ||
| 3f9w_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 7e-11 | ||
| 1mvh_A | 299 | Structure Of The Set Domain Histone Lysine Methyltr | 2e-07 | ||
| 3bo5_A | 290 | Crystal Structure Of Methyltransferase Domain Of Hu | 2e-07 | ||
| 2wzo_A | 146 | The Structure Of The Fyr Domain Length = 146 | 7e-07 | ||
| 1ml9_A | 302 | Structure Of The Neurospora Set Domain Protein Dim- | 3e-06 | ||
| 4fu6_A | 153 | Crystal Structure Of The Psip1 Pwwp Domain Length = | 8e-05 | ||
| 2lq6_A | 87 | Solution Structure Of Brd1 Phd2 Finger Length = 87 | 7e-04 |
| >pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 | Back alignment and structure |
|
| >pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 | Back alignment and structure |
| >pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 | Back alignment and structure |
| >pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 | Back alignment and structure |
| >pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 | Back alignment and structure |
| >pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 | Back alignment and structure |
| >pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 | Back alignment and structure |
| >pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 | Back alignment and structure |
| >pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 | Back alignment and structure |
| >pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 | Back alignment and structure |
| >pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 | Back alignment and structure |
| >pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 | Back alignment and structure |
| >pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 | Back alignment and structure |
| >pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 | Back alignment and structure |
| >pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 | Back alignment and structure |
| >pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 | Back alignment and structure |
| >pdb|2WZO|A Chain A, The Structure Of The Fyr Domain Length = 146 | Back alignment and structure |
| >pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 | Back alignment and structure |
| >pdb|4FU6|A Chain A, Crystal Structure Of The Psip1 Pwwp Domain Length = 153 | Back alignment and structure |
| >pdb|2LQ6|A Chain A, Solution Structure Of Brd1 Phd2 Finger Length = 87 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 | Back alignment and structure |
|---|
Score = 233 bits (597), Expect = 3e-72
Identities = 77/164 (46%), Positives = 105/164 (64%), Gaps = 4/164 (2%)
Query: 629 RDAPNFLSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSI 688
R L M +++H+K+T ++ + +S IHG G+F K AG+MVIEY G ++R
Sbjct: 31 RATSMDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQ 90
Query: 689 ADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEH 748
D+RE + + G G YMFRIDD V+DAT G+ A INHSCEPNCYSRVI+++G +H
Sbjct: 91 TDKREKYYDSK--GIGCYMFRIDDSEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKH 148
Query: 749 IIIFAKRDIKQWEELTYDYRF--FSIDEQLACYCGFPRCRGVVN 790
I+IFA R I + EELTYDY+F +L C CG +CR +N
Sbjct: 149 IVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFLN 192
|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 | Back alignment and structure |
|---|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 | Back alignment and structure |
|---|
| >2wzo_A Transforming growth factor beta regulator 1; nucleus, cell cycle, tumor suppressor; 1.60A {Homo sapiens} Length = 146 | Back alignment and structure |
|---|
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 | Back alignment and structure |
|---|
| >2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2 Length = 110 | Back alignment and structure |
|---|
| >2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe} Length = 108 | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 | Back alignment and structure |
|---|
| >1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A* Length = 147 | Back alignment and structure |
|---|
| >3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} Length = 154 | Back alignment and structure |
|---|
| >2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens} Length = 134 | Back alignment and structure |
|---|
| >1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A Length = 110 | Back alignment and structure |
|---|
| >3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} PDB: 3qj6_A* 3eae_A 1n27_A Length = 94 | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152 | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 | Back alignment and structure |
|---|
| >2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} Length = 88 | Back alignment and structure |
|---|
| >3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A* Length = 158 | Back alignment and structure |
|---|
| >3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A* Length = 130 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237 | Back alignment and structure |
|---|
| >1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 Length = 88 | Back alignment and structure |
|---|
| >2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus} Length = 66 | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 814 | ||||
| d2f69a2 | 171 | b.85.7.1 (A:194-364) Histone H3 K4-specific methyl | 1e-28 | |
| d1mvha_ | 269 | b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S | 3e-26 | |
| d1ml9a_ | 284 | b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T | 5e-22 | |
| d2g46a1 | 119 | b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth | 9e-21 | |
| d2nlua1 | 100 | b.34.9.2 (A:1-100) Hepatoma-derived growth factor, | 4e-18 | |
| d2daqa1 | 97 | b.34.9.2 (A:8-104) Histone-lysine N-methyltransfer | 5e-18 | |
| d1h3za_ | 108 | b.34.9.2 (A:) Hypothetical protein SPBC215.07c {Fi | 2e-15 | |
| d1khca_ | 137 | b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse | 2e-13 | |
| d1we9a_ | 64 | g.50.1.2 (A:) PHD finger protein At5g26210 {Thale | 5e-05 | |
| d1weva_ | 88 | g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu | 8e-05 | |
| d1f62a_ | 51 | g.50.1.2 (A:) Williams-Beuren syndrome transcripti | 5e-04 | |
| d1wema_ | 76 | g.50.1.2 (A:) Death associated transcription facto | 0.002 | |
| d2h2ja2 | 261 | b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain | 0.002 | |
| d1weea_ | 72 | g.50.1.2 (A:) PHD finger protein At1g33420 {Thale | 0.004 |
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: Histone H3 K4-specific methyltransferase SET7/9 catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 1e-28
Identities = 34/150 (22%), Positives = 51/150 (34%), Gaps = 22/150 (14%)
Query: 649 RKRLAFGKSGIH--GFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTY 706
+R+ +S I G G+F+K ++ Y G + D R+ N
Sbjct: 20 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWA-LNG------N 72
Query: 707 MFRIDDERVIDATR--------AGSIAHLINHSCEPNC-YSRVISVNGDEHIIIFAKRDI 757
+D+E VID S+ H NHS PNC Y + I R +
Sbjct: 73 TLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAV 132
Query: 758 KQWEELTYDYRFFSIDEQLACYCGFPRCRG 787
+ EELT Y + + P
Sbjct: 133 EADEELTVAYGY----DHSPPGKSGPEAPE 158
|
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 | Back information, alignment and structure |
|---|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 | Back information, alignment and structure |
|---|
| >d2nlua1 b.34.9.2 (A:1-100) Hepatoma-derived growth factor, HDGF {Human (Homo sapiens) [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
| >d2daqa1 b.34.9.2 (A:8-104) Histone-lysine N-methyltransferase NSD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 97 | Back information, alignment and structure |
|---|
| >d1h3za_ b.34.9.2 (A:) Hypothetical protein SPBC215.07c {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 108 | Back information, alignment and structure |
|---|
| >d1khca_ b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse (Mus musculus) [TaxId: 10090]} Length = 137 | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64 | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76 | Back information, alignment and structure |
|---|
| >d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 261 | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| d1ml9a_ | 284 | Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | 100.0 | |
| d1mvha_ | 269 | SET domain of Clr4 {Fission yeast (Schizosaccharom | 100.0 | |
| d2f69a2 | 171 | Histone H3 K4-specific methyltransferase SET7/9 ca | 99.94 | |
| d2daqa1 | 97 | Histone-lysine N-methyltransferase NSD3 {Human (Ho | 99.88 | |
| d1khca_ | 137 | DNA methyltransferase DNMT3B {Mouse (Mus musculus) | 99.87 | |
| d2nlua1 | 100 | Hepatoma-derived growth factor, HDGF {Human (Homo | 99.87 | |
| d2g46a1 | 119 | Viral histone H3 Lysine 27 Methyltransferase {Para | 99.87 | |
| d1h3za_ | 108 | Hypothetical protein SPBC215.07c {Fission yeast (S | 99.86 | |
| d2h2ja2 | 261 | RuBisCo LSMT catalytic domain {Garden pea (Pisum s | 98.92 | |
| d1weva_ | 88 | PHD finger protein 22 {Mouse (Mus musculus) [TaxId | 98.08 | |
| d1fp0a1 | 70 | Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo | 97.58 | |
| d1f62a_ | 51 | Williams-Beuren syndrome transcription factor, WST | 97.5 | |
| d1we9a_ | 64 | PHD finger protein At5g26210 {Thale cress (Arabido | 97.39 | |
| d1mm2a_ | 61 | Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 | 97.36 | |
| d1wesa_ | 71 | PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu | 97.34 | |
| d1wema_ | 76 | Death associated transcription factor 1, Datf1 (DI | 96.7 | |
| d1wewa_ | 78 | Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop | 96.69 | |
| d1wepa_ | 79 | PHD finger protein 8 {Mouse (Mus musculus) [TaxId: | 96.68 | |
| d1weea_ | 72 | PHD finger protein At1g33420 {Thale cress (Arabido | 96.66 | |
| d2pnxa1 | 51 | Inhibitor of growth protein 4, Ing4 {Homo sapiens | 96.43 | |
| d1zbdb_ | 124 | Effector domain of rabphilin-3a {Rat (Rattus norve | 90.92 | |
| d2f5ka1 | 83 | Mortality factor 4-like protein 1, MRG15 {Human (H | 89.93 | |
| d1wema_ | 76 | Death associated transcription factor 1, Datf1 (DI | 85.97 | |
| d1weva_ | 88 | PHD finger protein 22 {Mouse (Mus musculus) [TaxId | 85.34 | |
| d1wepa_ | 79 | PHD finger protein 8 {Mouse (Mus musculus) [TaxId: | 83.32 | |
| d1wgsa_ | 133 | Probable histone acetyltransferase MYST1 {Mouse (M | 83.17 | |
| d1fp0a1 | 70 | Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo | 82.51 | |
| d1wewa_ | 78 | Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop | 81.44 | |
| d1mm2a_ | 61 | Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 | 81.01 |
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: Dim-5 species: Fungus (Neurospora crassa) [TaxId: 5141]
Probab=100.00 E-value=5.1e-35 Score=241.46 Aligned_cols=145 Identities=25% Similarity=0.351 Sum_probs=123.1
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC--
Q ss_conf 663446288755030339999840358038860017999969962591028768966677776202598404787188--
Q 003510 635 LSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD-- 712 (814)
Q Consensus 635 ~~~~~~~~~l~~~~~~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~~-- 712 (814)
++..|.|+.+|++.+.+++|++++.+||||||+++|++|+||+||+|++++..+++++... +......+.|+|.++.
T Consensus 110 C~~~C~Nr~~q~g~~~~lev~kt~~kG~Gv~a~~~I~kGt~I~eY~Gevi~~~ea~~~~~~-~~~~~~~~~y~~~l~~~~ 188 (284)
T d1ml9a_ 110 CSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAE-STIARRKDVYLFALDKFS 188 (284)
T ss_dssp SCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHH-SCGGGCHHHHEEECCSSC
T ss_pred CCCCCCCEECCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHH-HHHHCCCCCCCEECCCCC
T ss_conf 6998898224389845779998589723885587718999999934753689999999988-876146884202003456
Q ss_pred ------------CEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCE----EEEEEEECCCCCCCCEEEEECCCCCCC---
Q ss_conf ------------3199324468801136698999915899997891----499999947999998166717999989---
Q 003510 713 ------------ERVIDATRAGSIAHLINHSCEPNCYSRVISVNGD----EHIIIFAKRDIKQWEELTYDYRFFSID--- 773 (814)
Q Consensus 713 ------------~~~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~----~~i~i~A~r~I~~GeELT~dY~~~~~~--- 773 (814)
.++|||++.||+||||||||+||+.+..+++++. .+|+|||+|||++||||||||+....+
T Consensus 189 ~~~~~~~~~~~~~~~iDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dYg~~~~~~~~ 268 (284)
T d1ml9a_ 189 DPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLES 268 (284)
T ss_dssp CSSSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC-------
T ss_pred CCCCCCCCCCCCCEEEEEEECCCHHHEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHH
T ss_conf 64311112367854674112156123143135678616899940478972079999897129999898761899777310
Q ss_pred ---------CCEEEEE
Q ss_conf ---------9946540
Q 003510 774 ---------EQLACYC 780 (814)
Q Consensus 774 ---------~~~~C~C 780 (814)
..+.|+|
T Consensus 269 ~~~~~~~~~~~~~C~C 284 (284)
T d1ml9a_ 269 DAHDPSKISEMTKCLC 284 (284)
T ss_dssp ----------------
T ss_pred HCCHHHCCCCCCEEEC
T ss_conf 0010112568766259
|
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2daqa1 b.34.9.2 (A:8-104) Histone-lysine N-methyltransferase NSD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1khca_ b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2nlua1 b.34.9.2 (A:1-100) Hepatoma-derived growth factor, HDGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1h3za_ b.34.9.2 (A:) Hypothetical protein SPBC215.07c {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2f5ka1 b.34.13.3 (A:6-88) Mortality factor 4-like protein 1, MRG15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wgsa_ b.34.13.3 (A:) Probable histone acetyltransferase MYST1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|