Citrus Sinensis ID: 003592

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------81

MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccEEEEcccccHHHHcccccccccccccccccccccEEEEEEEEEcccccccEEEEHHccccccccccccHHHHcccccccccccccccccccccEEEEEECccccccccccCEcccccccccccccccccccccEEEEEEcccccEEEEEEECcccccEEEcccccccccccccccccEEEEEEcccccEEEEEEECcccccccccccccccccccccHHHHHcccccccCEEEEEccccccccccccHHHHHHHHccccccccEEEEEEcccccccEEECccccccccccccccccccccEEEEEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccEEEEEcccccEEEEccccHHHHHHHccEEEEEcHHHHHccccccccccccccccccccccccccccccccccccccccccc

*E*****AAT**********************************************IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPEL*****************************HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD******S**LVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP************NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS**********************************************VLQGQENVGFVSPLY*****N**********************************************************************************************************************************************************************************************************************QGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD****CL*****************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Auxin response factor 4	Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.	probable	Q9ZTX9
Auxin response factor 4	Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	probable	Q5JK20

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WID, chain A
Confidence level:confident
Coverage over the Query: 168-282
View the alignment between query and template
View the model in PyMOL