Citrus Sinensis ID: 003653

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-----
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
ccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccEEEccccccccccEEccccEEEEEEcccccEEEEEEEcccccccccEEEEEEccccccccccEEEEEEcccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccHHHHHHccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccEEEEccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEcccccccccccccccEEEEEEEcccccEEEEEEccccccEEEEccccccccEEEEEEcccccccccccccccHHHHHHHcccccccccEEEEEccEEEEEEEcccccc
ccccccccccccccEEEEcccccccccccccccccccEEEcccccccccccccccccEccccHHHEccccccccccEccccccccccEEEcccccccccccEccccEEEEEEcccccEEEEEEEcccccccccccEEEEccccccccccEEEEEEccccccEEEEEEEcccccccccccccccEEEEcHHHHHHccccccccccccccccccccccEEEccccccccccccccccHHHccEEEEcHHHHHccccccccccccHHHHHcHHHHHHHccccEEEEccEEEEcccHHcccccccccccEEEcccccccccccccHHHcccccccccHHHHHHHHHHHHHHccccEEEEEEcccEcccccccccEEEEEcccccEEcEccccccEcccccccccEccccHHHHHHHHHHHHHHHHcccccEEEEccHHHHHccccccccccccccccccccccccccccccHHHHHHHcccHHHccEEEEccccccccEEcccccccccHHHHccccHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHEEEcccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEccccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHcccccccHccccccEEEcccccccccccccccEEEEEEccccccEEEEEEEcccccEEEEcccccccEEEEEEEccccccccccccccccccccccccccccccccEEccccEEEEEEEcccccc
mellqftsspllhgsskfinspefyksklsnlkkpptttfrccnhpnktshfansKAFENVTKNLVIRASKSAELETavikkpqsqrfqvskgyptpfgatlrdggvnfsIFSSNAVSATLCLITLsdlqenkvteEIALDSFANKTGDVWHVFLKGDfkdmlygykfdgkfspqeghyfdptkivldPYAKAVISraqfgvlgpdencwpqmaclvptpedefdwegdlplkypqrdlIIYEVHVrgftrhessktehpgtylGVVEKLDHLKDLginclelmpchefneleyfsynsvlgdykvnfWGYStinyfspmisyssagirncghDAINEFKLLVREAHKRGIEVVMDVVFNHtvegndkgpilsfrgvdnsvyymlapkgefynysgcgntfncnhpVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRgsslwdsvnvygipiegdllttgtplrspplidlisndpilRGVKLIAEAWdtgglyqvgifphwgiwsewngKYRDIVRQFIKGTDGFAGAFAEclcgspnlyqgggrkpwnsinfvcahdgfsladlvsynqkhnlangednndgethnnswncgqegeFANILVKKLRRRQMRNFFLCLMVsqgvpmismgdeyghtkggnnntychdndinyfrwdkkeesksdfFRFCCLLTKFRHeceslglsdfptadrlqwhghapglpdwsdksRFVAFTLIDSVKGEIYVAFNashlpviislpkrpgyrweplvdtskpepfdflssdlpakEIAIKqyapfldanlypmlSYSSIILLLSPDENA
mellqftsspllhgsskfiNSPEFYKSKLSNLKKPPTTTFRCCNHPNKtshfanskafENVTKNLVIRASKSAELETAvikkpqsqrfqvskGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGftrhessktehpgtyLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHtvegndkgpilsfRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLangednndGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHApglpdwsdkSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANlypmlsyssiilllspDENA
**************************************TFRCCNH*****HFANSKAFENVTKNLVIRA********************VSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRH******HPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQK*****************SWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLL******
*******************************************************************************************KGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIIL*LSP****
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFT********HPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
********SPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNL**********THNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSP****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query805 2.2.26 [Sep-21-2011]
O04196783 Isoamylase 1, chloroplast yes no 0.921 0.947 0.773 0.0
Q9M0S5764 Isoamylase 3, chloroplast no no 0.868 0.914 0.450 1e-175
P0A4Y4721 Glycogen operon protein G yes no 0.679 0.758 0.435 1e-129
P0A4Y5721 Glycogen operon protein G yes no 0.679 0.758 0.435 1e-129
Q6CZK1658 Glycogen debranching enzy yes no 0.795 0.972 0.355 1e-108
B4TY88658 Glycogen debranching enzy no no 0.754 0.922 0.356 1e-107
B5F8Q3658 Glycogen debranching enzy no no 0.754 0.922 0.356 1e-107
B5BHI1658 Glycogen debranching enzy no no 0.754 0.922 0.356 1e-107
Q5PM07658 Glycogen debranching enzy no no 0.754 0.922 0.356 1e-107
Q8ZLG6658 Glycogen debranching enzy no no 0.754 0.922 0.356 1e-107
>sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1 Back     alignment and function desciption
 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/745 (77%), Positives = 662/745 (88%), Gaps = 3/745 (0%)

Query: 58  FENVTKNLVIRASKSAELETAVIKKP-QSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNA 116
           F  ++ +   R S  AE   AV++KP +S RF +S G P+PFG T+RD GVNFS++S+N+
Sbjct: 37  FRPISISAKDRRSNEAE-NIAVVEKPLKSDRFFISDGLPSPFGPTVRDDGVNFSVYSTNS 95

Query: 117 VSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQE 176
           VSAT+CLI+LSDL++NKVTEEI LD   N+TG VWHVFL+GDFKDMLYGY+FDGKFSP+E
Sbjct: 96  VSATICLISLSDLRQNKVTEEIQLDPSRNRTGHVWHVFLRGDFKDMLYGYRFDGKFSPEE 155

Query: 177 GHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQ 236
           GHY+D + I+LDPYAKA+ISR +FGVLGPD+NCWPQMAC+VPT E+EFDWEGD+ LK PQ
Sbjct: 156 GHYYDSSNILLDPYAKAIISRDEFGVLGPDDNCWPQMACMVPTREEEFDWEGDMHLKLPQ 215

Query: 237 RDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFS 296
           +DL+IYE+HVRGFTRHESSK E PGTY GV EKLDHLK+LGINC+ELMPCHEFNELEY+S
Sbjct: 216 KDLVIYEMHVRGFTRHESSKIEFPGTYQGVAEKLDHLKELGINCIELMPCHEFNELEYYS 275

Query: 297 YNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMD 356
           YN++LGD++VNFWGYSTI +FSPMI Y+SA   N    AINEFK+LV+EAHKRGIEV+MD
Sbjct: 276 YNTILGDHRVNFWGYSTIGFFSPMIRYASASSNNFAGRAINEFKILVKEAHKRGIEVIMD 335

Query: 357 VVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCL 416
           VV NHT EGN+KGPI SFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFI+DCL
Sbjct: 336 VVLNHTAEGNEKGPIFSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCL 395

Query: 417 RYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISND 476
           RYWVTEMHVDGFRFDL SIM+R SSLWD+ NVYG  +EGDLLTTGTP+  PP+ID+ISND
Sbjct: 396 RYWVTEMHVDGFRFDLGSIMSRSSSLWDAANVYGADVEGDLLTTGTPISCPPVIDMISND 455

Query: 477 PILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLC 536
           PILRGVKLIAEAWD GGLYQVG+FPHWGIWSEWNGK+RD+VRQFIKGTDGF+GAFAECLC
Sbjct: 456 PILRGVKLIAEAWDAGGLYQVGMFPHWGIWSEWNGKFRDVVRQFIKGTDGFSGAFAECLC 515

Query: 537 GSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQ 596
           GSPNLYQ GGRKPW+SINF+CAHDGF+LADLV+YN K+NLANGE+NNDGE HN SWNCG+
Sbjct: 516 GSPNLYQ-GGRKPWHSINFICAHDGFTLADLVTYNNKNNLANGEENNDGENHNYSWNCGE 574

Query: 597 EGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFR 656
           EG+FA+I VK+LR+RQMRNFF+ LMVSQGVPMI MGDEYGHTKGGNNNTYCHDN +NYFR
Sbjct: 575 EGDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYMNYFR 634

Query: 657 WDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAF 716
           WDKKEE+ SDFFRFC +L KFR ECESLGL+DFPTA RLQWHG AP +P+WS+ SRFVAF
Sbjct: 635 WDKKEEAHSDFFRFCRILIKFRDECESLGLNDFPTAKRLQWHGLAPEIPNWSETSRFVAF 694

Query: 717 TLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIK 776
           +L+DSVK EIYVAFN SHL  ++SLP RPGYRWEP VDTSKP P+D ++ DLP +E A+K
Sbjct: 695 SLVDSVKKEIYVAFNTSHLATLVSLPNRPGYRWEPFVDTSKPSPYDCITPDLPERETAMK 754

Query: 777 QYAPFLDANLYPMLSYSSIILLLSP 801
           QY  FLDAN+YPMLSYSSIILLLSP
Sbjct: 755 QYRHFLDANVYPMLSYSSIILLLSP 779
Involved in the trimming of pre-amylopectin chains. Accelerates the crystallization of nascent amylopectin molecules during starch synthesis. ISA1 and ISA2 work exclusively together as a multimeric holoenzyme. ISA1-ISA2 removes preferentially branches that are very close to other branches.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 6EC: 8
>sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2 Back     alignment and function description
>sp|P0A4Y4|GLGX_MYCTU Glycogen operon protein GlgX homolog OS=Mycobacterium tuberculosis GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|P0A4Y5|GLGX_MYCBO Glycogen operon protein GlgX homolog OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q6CZK1|GLGX_ERWCT Glycogen debranching enzyme OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|B4TY88|GLGX_SALSV Glycogen debranching enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|B5F8Q3|GLGX_SALA4 Glycogen debranching enzyme OS=Salmonella agona (strain SL483) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|B5BHI1|GLGX_SALPK Glycogen debranching enzyme OS=Salmonella paratyphi A (strain AKU_12601) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q5PM07|GLGX_SALPA Glycogen debranching enzyme OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q8ZLG6|GLGX_SALTY Glycogen debranching enzyme OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=glgX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query805
224142633801 predicted protein [Populus trichocarpa] 0.977 0.982 0.782 0.0
139867053791 isoamylase-type starch-debranching enzym 0.930 0.946 0.810 0.0
359484905748 PREDICTED: isoamylase 1, chloroplastic-l 0.924 0.994 0.810 0.0
224087162826 predicted protein [Populus trichocarpa] 0.960 0.935 0.762 0.0
296090473809 unnamed protein product [Vitis vinifera] 0.965 0.960 0.776 0.0
356527718796 PREDICTED: isoamylase 1, chloroplastic-l 0.920 0.930 0.804 0.0
255578059795 isoamylase, putative [Ricinus communis] 0.890 0.901 0.820 0.0
449463916810 PREDICTED: isoamylase 1, chloroplastic-l 0.914 0.908 0.791 0.0
449507370810 PREDICTED: isoamylase 1, chloroplastic-l 0.914 0.908 0.791 0.0
27728145793 isoamylase isoform 1 [Solanum tuberosum] 0.921 0.935 0.784 0.0
>gi|224142633|ref|XP_002324659.1| predicted protein [Populus trichocarpa] gi|222866093|gb|EEF03224.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1325 bits (3428), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/800 (78%), Positives = 703/800 (87%), Gaps = 13/800 (1%)

Query: 11  LLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFAN--SKAFENVTKNLVIR 68
           LLH +S  ++  +F    +S  +  P     C    N TS+  N  S  F N T ++ I+
Sbjct: 3   LLHSTSHSVHVLKF----ISQFRSTPKF---CLLKRNVTSNLENFGSNLFSNSTASISIK 55

Query: 69  ASKSAELETAVI---KKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLIT 125
           A++   ++TAV+   + P+ ++FQV +G+P+PFGAT+RDGGVNF+IFS+NAVSATLCLI+
Sbjct: 56  AARDG-VDTAVVVEEEGPKLRKFQVFEGHPSPFGATVRDGGVNFAIFSANAVSATLCLIS 114

Query: 126 LSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKI 185
           LSDL EN+VTE+  LD   NKTGDVWHV LKGDFKDMLYGYKFDG FSP+EGHY+DP++I
Sbjct: 115 LSDLPENRVTEQFFLDPLTNKTGDVWHVHLKGDFKDMLYGYKFDGSFSPEEGHYYDPSQI 174

Query: 186 VLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVH 245
           VLDPYAKAVISR  FGVLG D+NCWPQMAC++PT +D+FDWEGD  LKYPQRDLI+YE+H
Sbjct: 175 VLDPYAKAVISRGDFGVLGSDDNCWPQMACMIPTADDKFDWEGDSLLKYPQRDLILYEMH 234

Query: 246 VRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYK 305
           VRGFT+HESS+TE PGTYLGVVEKL HLK+LG+NC+ELMPCHEFNELEY+ YNSV GDYK
Sbjct: 235 VRGFTQHESSRTEFPGTYLGVVEKLGHLKELGVNCIELMPCHEFNELEYYDYNSVFGDYK 294

Query: 306 VNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEG 365
           VNFWGYST+NYFSPM  YSSAG  NCGHDAINEFKLLVREAHKRGIEV MDVVFNHT EG
Sbjct: 295 VNFWGYSTVNYFSPMTRYSSAGTLNCGHDAINEFKLLVREAHKRGIEVFMDVVFNHTAEG 354

Query: 366 NDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHV 425
           N++GPILSF+GVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFI+DCLRYWV EMHV
Sbjct: 355 NERGPILSFKGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVIEMHV 414

Query: 426 DGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLI 485
           DGFRFDLASIMTR SSLWD+VNV+G PIEGDL+TTGTPL SPPLI+++SNDPILR VKLI
Sbjct: 415 DGFRFDLASIMTRSSSLWDAVNVFGSPIEGDLVTTGTPLGSPPLIEMMSNDPILRDVKLI 474

Query: 486 AEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGG 545
           AEAWD GGLYQVG+FPHW IWSEWNGKYRDIVRQFIKGTDGF+GAFAECLCGSP LYQ G
Sbjct: 475 AEAWDAGGLYQVGMFPHWHIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPGLYQEG 534

Query: 546 GRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILV 605
           GRKPWNSINFVCAHDGF+LADLV+YN+KHNLANGEDNNDGE HNNSWNCGQEGE A+I V
Sbjct: 535 GRKPWNSINFVCAHDGFTLADLVTYNEKHNLANGEDNNDGENHNNSWNCGQEGELASISV 594

Query: 606 KKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKS 665
           KKLR+RQMRNFFLCLMVSQGVPMI MGDEYGHTKGGNNNTYCHDN INYF WDKKEES S
Sbjct: 595 KKLRKRQMRNFFLCLMVSQGVPMIHMGDEYGHTKGGNNNTYCHDNYINYFWWDKKEESSS 654

Query: 666 DFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGE 725
           DFFRFC L+TKFRHECESLGL+DFPTA+RLQWHGHAPG PDWS+ SRFVAFTLIDSVK E
Sbjct: 655 DFFRFCRLMTKFRHECESLGLNDFPTAERLQWHGHAPGTPDWSETSRFVAFTLIDSVKRE 714

Query: 726 IYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDAN 785
           IY+AFNASHL V I+LP+RP YRWEPLVDT KP PFDFLS DLP ++ A+KQY+ FL+AN
Sbjct: 715 IYIAFNASHLSVTITLPERPAYRWEPLVDTGKPAPFDFLSGDLPERDTAMKQYSHFLEAN 774

Query: 786 LYPMLSYSSIILLLSPDENA 805
           LYPMLSYSSIIL+L P +NA
Sbjct: 775 LYPMLSYSSIILVLLPVDNA 794

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|139867053|dbj|BAF52941.1| isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|359484905|ref|XP_002265964.2| PREDICTED: isoamylase 1, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224087162|ref|XP_002308090.1| predicted protein [Populus trichocarpa] gi|222854066|gb|EEE91613.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296090473|emb|CBI40669.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356527718|ref|XP_003532455.1| PREDICTED: isoamylase 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255578059|ref|XP_002529900.1| isoamylase, putative [Ricinus communis] gi|223530627|gb|EEF32503.1| isoamylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449463916|ref|XP_004149676.1| PREDICTED: isoamylase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449507370|ref|XP_004163012.1| PREDICTED: isoamylase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|27728145|gb|AAN15317.1| isoamylase isoform 1 [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query805
TAIR|locus:2061216783 ISA1 "isoamylase 1" [Arabidops 0.919 0.945 0.759 0.0
TAIR|locus:2122343764 ISA3 "isoamylase 3" [Arabidops 0.469 0.494 0.444 2.7e-167
UNIPROTKB|Q8EGU6750 glgX "Glycogen isoamylase GlgX 0.426 0.457 0.398 2.4e-110
TIGR_CMR|SO_1495750 SO_1495 "glycogen operon prote 0.426 0.457 0.398 2.4e-110
UNIPROTKB|P15067657 glgX [Escherichia coli K-12 (t 0.411 0.503 0.366 4.1e-102
UNIPROTKB|Q9KKS1656 VC_A1029 "Glycogen operon prot 0.347 0.426 0.392 6.1e-89
TIGR_CMR|VC_A1029656 VC_A1029 "glycogen operon prot 0.347 0.426 0.392 6.1e-89
TAIR|locus:2014500882 DBE1 "debranching enzyme 1" [A 0.351 0.320 0.309 2.3e-74
UNIPROTKB|Q81KP1713 BAS4597 "Putative pullulanase" 0.320 0.361 0.308 7.6e-32
TIGR_CMR|BA_4953713 BA_4953 "pullulanase, putative 0.320 0.361 0.308 7.6e-32
TAIR|locus:2061216 ISA1 "isoamylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3183 (1125.5 bits), Expect = 0., P = 0.
 Identities = 565/744 (75%), Positives = 650/744 (87%)

Query:    44 NHPNKTSHFANSKA-FENVTKNLVIRASKSAELETAVIKKP-QSQRFQVSKGYPTPFGAT 101
             NH        N K  F  ++ +   R S  AE   AV++KP +S RF +S G P+PFG T
Sbjct:    22 NHTFPKISAPNFKPLFRPISISAKDRRSNEAE-NIAVVEKPLKSDRFFISDGLPSPFGPT 80

Query:   102 LRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKD 161
             +RD GVNFS++S+N+VSAT+CLI+LSDL++NKVTEEI LD   N+TG VWHVFL+GDFKD
Sbjct:    81 VRDDGVNFSVYSTNSVSATICLISLSDLRQNKVTEEIQLDPSRNRTGHVWHVFLRGDFKD 140

Query:   162 MLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPE 221
             MLYGY+FDGKFSP+EGHY+D + I+LDPYAKA+ISR +FGVLGPD+NCWPQMAC+VPT E
Sbjct:   141 MLYGYRFDGKFSPEEGHYYDSSNILLDPYAKAIISRDEFGVLGPDDNCWPQMACMVPTRE 200

Query:   222 DEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCL 281
             +EFDWEGD+ LK PQ+DL+IYE+HVRGFTRHESSK E PGTY GV EKLDHLK+LGINC+
Sbjct:   201 EEFDWEGDMHLKLPQKDLVIYEMHVRGFTRHESSKIEFPGTYQGVAEKLDHLKELGINCI 260

Query:   282 ELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKL 341
             ELMPCHEFNELEY+SYN++LGD++VNFWGYSTI +FSPMI Y+SA   N    AINEFK+
Sbjct:   261 ELMPCHEFNELEYYSYNTILGDHRVNFWGYSTIGFFSPMIRYASASSNNFAGRAINEFKI 320

Query:   342 LVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTF 401
             LV+EAHKRGIEV+MDVV NHT EGN+KGPI SFRGVDNSVYYMLAPKGEFYNYSGCGNTF
Sbjct:   321 LVKEAHKRGIEVIMDVVLNHTAEGNEKGPIFSFRGVDNSVYYMLAPKGEFYNYSGCGNTF 380

Query:   402 NCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTG 461
             NCNHPVVRQFI+DCLRYWVTEMHVDGFRFDL SIM+R SSLWD+ NVYG  +EGDLLTTG
Sbjct:   381 NCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAANVYGADVEGDLLTTG 440

Query:   462 TPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFI 521
             TP+  PP+ID+ISNDPILRGVKLIAEAWD GGLYQVG+FPHWGIWSEWNGK+RD+VRQFI
Sbjct:   441 TPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFPHWGIWSEWNGKFRDVVRQFI 500

Query:   522 KGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGED 581
             KGTDGF+GAFAECLCGSPNLYQGG RKPW+SINF+CAHDGF+LADLV+YN K+NLANGE+
Sbjct:   501 KGTDGFSGAFAECLCGSPNLYQGG-RKPWHSINFICAHDGFTLADLVTYNNKNNLANGEE 559

Query:   582 NNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGG 641
             NNDGE HN SWNCG+EG+FA+I VK+LR+RQMRNFF+ LMVSQGVPMI MGDEYGHTKGG
Sbjct:   560 NNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGG 619

Query:   642 NNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHA 701
             NNNTYCHDN +NYFRWDKKEE+ SDFFRFC +L KFR ECESLGL+DFPTA RLQWHG A
Sbjct:   620 NNNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECESLGLNDFPTAKRLQWHGLA 679

Query:   702 PGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPF 761
             P +P+WS+ SRFVAF+L+DSVK EIYVAFN SHL  ++SLP RPGYRWEP VDTSKP P+
Sbjct:   680 PEIPNWSETSRFVAFSLVDSVKKEIYVAFNTSHLATLVSLPNRPGYRWEPFVDTSKPSPY 739

Query:   762 DFLSSDLPAKEIAIKQYAPFLDAN 785
             D ++ DLP +E A+KQY  FLDAN
Sbjct:   740 DCITPDLPERETAMKQYRHFLDAN 763
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004556 "alpha-amylase activity" evidence=ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043169 "cation binding" evidence=IEA
GO:0010021 "amylopectin biosynthetic process" evidence=IMP
GO:0010368 "chloroplast isoamylase complex" evidence=IDA
GO:0019156 "isoamylase activity" evidence=IDA;IMP
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2122343 ISA3 "isoamylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EGU6 glgX "Glycogen isoamylase GlgX" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1495 SO_1495 "glycogen operon protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P15067 glgX [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KKS1 VC_A1029 "Glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A1029 VC_A1029 "glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TAIR|locus:2014500 DBE1 "debranching enzyme 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q81KP1 BAS4597 "Putative pullulanase" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4953 BA_4953 "pullulanase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04196ISOA1_ARATH3, ., 2, ., 1, ., 6, 80.77310.92170.9476yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.680.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query805
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 0.0
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 0.0
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 0.0
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 1e-166
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 1e-146
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 7e-81
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 1e-75
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 2e-65
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 9e-45
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 5e-43
cd00551260 cd00551, AmyAc_family, Alpha amylase catalytic dom 1e-37
cd02856130 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early 7e-36
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 7e-34
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 5e-33
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 1e-29
cd11313336 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly 9e-28
PLN02877970 PLN02877, PLN02877, alpha-amylase/limit dextrinase 2e-22
TIGR02103898 TIGR02103, pullul_strch, alpha-1,6-glucosidases, p 2e-21
cd11338389 cd11338, AmyAc_CMD, Alpha amylase catalytic domain 8e-21
cd11316403 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic 5e-20
cd11322402 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom 2e-19
cd11334447 cd11334, AmyAc_TreS, Alpha amylase catalytic domai 8e-19
cd11321406 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic 3e-17
COG0366505 COG0366, AmyA, Glycosidases [Carbohydrate transpor 3e-16
PRK12313633 PRK12313, PRK12313, glycogen branching enzyme; Pro 9e-16
TIGR02456539 TIGR02456, treS_nterm, trehalose synthase 2e-15
cd11337328 cd11337, AmyAc_CMD_like, Alpha amylase catalytic d 3e-13
pfam0292283 pfam02922, CBM_48, Carbohydrate-binding module 48 5e-13
PLN02447758 PLN02447, PLN02447, 1,4-alpha-glucan-branching enz 6e-13
smart00642166 smart00642, Aamy, Alpha-amylase domain 8e-13
pfam00128314 pfam00128, Alpha-amylase, Alpha amylase, catalytic 1e-12
cd11353366 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat 1e-12
TIGR02403543 TIGR02403, trehalose_treC, alpha,alpha-phosphotreh 3e-12
cd11339344 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal 7e-12
PLN02960897 PLN02960, PLN02960, alpha-amylase 1e-11
cd11234101 cd11234, E_set_GDE_N, N-terminal Early set domain 2e-11
cd11333428 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase ca 1e-10
cd11340407 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catal 4e-10
cd11332481 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalyti 8e-10
PRK05402726 PRK05402, PRK05402, glycogen branching enzyme; Pro 9e-10
cd11354357 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalyt 2e-09
cd11348429 cd11348, AmyAc_2, Alpha amylase catalytic domain f 3e-09
cd11328470 cd11328, AmyAc_maltase, Alpha amylase catalytic do 5e-09
PRK10933551 PRK10933, PRK10933, trehalose-6-phosphate hydrolas 7e-09
cd11331450 cd11331, AmyAc_OligoGlu_like, Alpha amylase cataly 2e-08
cd11330472 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic d 2e-08
PRK147051224 PRK14705, PRK14705, glycogen branching enzyme; Pro 2e-08
cd0286097 cd02860, E_set_Pullulanase, Early set domain assoc 4e-08
TIGR01515618 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha 4e-08
cd11315352 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic 7e-08
cd11320389 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase 8e-08
PRK09505683 PRK09505, malS, alpha-amylase; Reviewed 5e-07
cd11324536 cd11324, AmyAc_Amylosucrase, Alpha amylase catalyt 8e-07
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 1e-06
PLN03244872 PLN03244, PLN03244, alpha-amylase; Provisional 2e-06
cd11359456 cd11359, AmyAc_SLC3A1, Alpha amylase catalytic dom 2e-06
PRK10785598 PRK10785, PRK10785, maltodextrin glucosidase; Prov 6e-06
cd11352443 cd11352, AmyAc_5, Alpha amylase catalytic domain f 7e-06
PRK14706639 PRK14706, PRK14706, glycogen branching enzyme; Pro 2e-05
PRK12568730 PRK12568, PRK12568, glycogen branching enzyme; Pro 1e-04
cd11345326 cd11345, AmyAc_SLC3A2, Alpha amylase catalytic dom 6e-04
cd11314302 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase 0.001
cd11344355 cd11344, AmyAc_GlgE_like, Alpha amylase catalytic 0.004
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information 
 Score =  739 bits (1910), Expect = 0.0
 Identities = 233/462 (50%), Positives = 296/462 (64%), Gaps = 35/462 (7%)

Query: 224 FDWEGDLPLKYPQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVE--KLDHLKDLGINC 280
           FDWEGD   + P  D +IYE+HVRGFT+ H     E  GTY G+ E  K+ +LK+LG+  
Sbjct: 1   FDWEGDARPRIPWEDTVIYEMHVRGFTKLHPDVPEELRGTYAGLAEPAKIPYLKELGVTA 60

Query: 281 LELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFK 340
           +EL+P H F++ E+      +     N+WGY+T+N+F+P   Y+S          ++EFK
Sbjct: 61  VELLPVHAFDDEEHL-----VERGLTNYWGYNTLNFFAPDPRYASDD---APGGPVDEFK 112

Query: 341 LLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFY-NYSGCGN 399
            +V+  HK GIEV++DVV+NHT EG + GP LSFRG+DN+ YY L P G +Y NY+GCGN
Sbjct: 113 AMVKALHKAGIEVILDVVYNHTAEGGELGPTLSFRGLDNASYYRLDPDGPYYLNYTGCGN 172

Query: 400 TFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLT 459
           T N NHPVV + I+D LRYWVTEMHVDGFRFDLAS++ R                     
Sbjct: 173 TLNTNHPVVLRLILDSLRYWVTEMHVDGFRFDLASVLGRDPD------------------ 214

Query: 460 TGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGL-YQVGIFPHWGIWSEWNGKYRDIVR 518
            G P  +PPL++ I+ DP+L GVKLIAE WD GG  YQVG FP    W+EWN +YRD VR
Sbjct: 215 -GFPDPNPPLLEAIAQDPVLSGVKLIAEPWDIGGGGYQVGNFPPG--WAEWNDRYRDDVR 271

Query: 519 QFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLAN 578
           +F +G  G  G FA  L GS +L+   GR P  S+NF+ AHDGF+LADLVSYN+KHN AN
Sbjct: 272 RFWRGDGGLVGDFATRLAGSSDLFGHDGRSPSASVNFITAHDGFTLADLVSYNEKHNEAN 331

Query: 579 GEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHT 638
           GE+N DG   N SWNCG EG   +  +  LRRRQMRN    L++SQG PM+  GDE+G T
Sbjct: 332 GENNRDGHNDNLSWNCGVEGPTDDPEILALRRRQMRNLLATLLLSQGTPMLLAGDEFGRT 391

Query: 639 KGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHE 680
           + GNNN YC DN+I++  WD  E   SD FRF   L   R  
Sbjct: 392 QQGNNNAYCQDNEISWLDWDLLEA-DSDLFRFVRRLIALRKA 432

Debranching enzymes facilitate the breakdown of glycogen through glucosyltransferase and glucosidase activity. These activities are performed by a single enzyme in mammals, yeast, and some bacteria, but by two distinct enzymes in Escherichia coli and other bacteria. Debranching enzymes perform two activities: 4-alpha-D-glucanotransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). 4-alpha-D-glucanotransferase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. Amylo-alpha-1,6-glucosidase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. In Escherichia coli, GlgX is the debranching enzyme and malQ is the 4-alpha-glucanotransferase. TreX, an archaeal glycogen-debranching enzyme has dual activities like mammals and yeast, but is structurally similar to GlgX. TreX exists in two oligomeric states, a dimer and tetramer. Isoamylase (EC 3.2.1.68) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen and their beta-limit dextrins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 433
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family Back     alignment and domain information
>gnl|CDD|199886 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme and bacterial isoamylase (also called glycogen 6-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase Back     alignment and domain information
>gnl|CDD|233729 TIGR02103, pullul_strch, alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>gnl|CDD|200477 cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme) Back     alignment and domain information
>gnl|CDD|200473 cd11334, AmyAc_TreS, Alpha amylase catalytic domain found in Trehalose synthetase Back     alignment and domain information
>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes Back     alignment and domain information
>gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|233874 TIGR02456, treS_nterm, trehalose synthase Back     alignment and domain information
>gnl|CDD|200476 cd11337, AmyAc_CMD_like, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|217288 pfam02922, CBM_48, Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Back     alignment and domain information
>gnl|CDD|215246 PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>gnl|CDD|214758 smart00642, Aamy, Alpha-amylase domain Back     alignment and domain information
>gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain Back     alignment and domain information
>gnl|CDD|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|233851 TIGR02403, trehalose_treC, alpha,alpha-phosphotrehalase Back     alignment and domain information
>gnl|CDD|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|215519 PLN02960, PLN02960, alpha-amylase Back     alignment and domain information
>gnl|CDD|199893 cd11234, E_set_GDE_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme Back     alignment and domain information
>gnl|CDD|200472 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins Back     alignment and domain information
>gnl|CDD|200479 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200471 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins Back     alignment and domain information
>gnl|CDD|235445 PRK05402, PRK05402, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200491 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200486 cd11348, AmyAc_2, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200467 cd11328, AmyAc_maltase, Alpha amylase catalytic domain found in maltase (also known as alpha glucosidase) and related proteins Back     alignment and domain information
>gnl|CDD|182849 PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|200470 cd11331, AmyAc_OligoGlu_like, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|200469 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|237794 PRK14705, PRK14705, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|199890 cd02860, E_set_Pullulanase, Early set domain associated with the catalytic domain of pullulanase (also called dextrinase and alpha-dextrin endo-1,6-alpha glucosidase) Back     alignment and domain information
>gnl|CDD|188150 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>gnl|CDD|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins Back     alignment and domain information
>gnl|CDD|236543 PRK09505, malS, alpha-amylase; Reviewed Back     alignment and domain information
>gnl|CDD|200463 cd11324, AmyAc_Amylosucrase, Alpha amylase catalytic domain found in Amylosucrase Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|178782 PLN03244, PLN03244, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|200494 cd11359, AmyAc_SLC3A1, Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins Back     alignment and domain information
>gnl|CDD|236759 PRK10785, PRK10785, maltodextrin glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|200489 cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|237795 PRK14706, PRK14706, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|139075 PRK12568, PRK12568, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200483 cd11345, AmyAc_SLC3A2, Alpha amylase catalytic domain found in solute carrier family 3 member 2 proteins Back     alignment and domain information
>gnl|CDD|200453 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200482 cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 805
TIGR02100688 glgX_debranch glycogen debranching enzyme GlgX. Th 100.0
PRK03705658 glycogen debranching enzyme; Provisional 100.0
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 100.0
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 100.0
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 100.0
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 100.0
PLN02877970 alpha-amylase/limit dextrinase 100.0
TIGR02103898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 100.0
KOG0470757 consensus 1,4-alpha-glucan branching enzyme/starch 100.0
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 100.0
PRK12568730 glycogen branching enzyme; Provisional 100.0
PRK12313633 glycogen branching enzyme; Provisional 100.0
PRK14706639 glycogen branching enzyme; Provisional 100.0
PRK05402726 glycogen branching enzyme; Provisional 100.0
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 100.0
PRK147051224 glycogen branching enzyme; Provisional 100.0
PLN02447758 1,4-alpha-glucan-branching enzyme 100.0
PRK10785598 maltodextrin glucosidase; Provisional 100.0
PLN02960897 alpha-amylase 100.0
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 100.0
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 100.0
TIGR02403543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 100.0
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 100.0
PRK09505683 malS alpha-amylase; Reviewed 100.0
PRK09441479 cytoplasmic alpha-amylase; Reviewed 100.0
PLN03244872 alpha-amylase; Provisional 100.0
PLN00196428 alpha-amylase; Provisional 100.0
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 100.0
PLN02361401 alpha-amylase 100.0
TIGR03852470 sucrose_gtfA sucrose phosphorylase. In the forward 100.0
PRK13840495 sucrose phosphorylase; Provisional 100.0
COG0366505 AmyA Glycosidases [Carbohydrate transport and meta 100.0
KOG0471545 consensus Alpha-amylase [Carbohydrate transport an 100.0
PLN02784894 alpha-amylase 100.0
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 100.0
TIGR02401 825 trehalose_TreY malto-oligosyltrehalose synthase. T 99.97
PRK14511 879 maltooligosyl trehalose synthase; Provisional 99.95
PF14872811 GHL5: Hypothetical glycoside hydrolase 5 99.88
KOG2212504 consensus Alpha-amylase [Carbohydrate transport an 99.87
smart00642166 Aamy Alpha-amylase domain. 99.86
cd02852119 Isoamylase_N_term Isoamylase N-terminus domain. Is 99.75
cd02856103 Glycogen_debranching_enzyme_N_term Glycogen_debran 99.73
cd02860100 Pullulanase_N_term Pullulanase domain N-terminus. 99.65
PRK14507 1693 putative bifunctional 4-alpha-glucanotransferase/m 99.58
PF0292285 CBM_48: Carbohydrate-binding module 48 (Isoamylase 99.45
COG3280 889 TreY Maltooligosyl trehalose synthase [Carbohydrat 99.32
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 99.31
cd0285385 MTHase_N_term Maltooligosyl trehalose synthase (MT 99.28
cd0285499 Glycogen_branching_enzyme_like_N_term Glycogen bra 99.17
cd02855106 Glycogen_branching_enzyme_N_term Glycogen branchin 98.87
PF11852168 DUF3372: Domain of unknown function (DUF3372); Int 98.73
cd0285885 Esterase_N_term Esterase N-terminal domain. Estera 98.67
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 98.66
PF14701423 hDGE_amylase: glucanotransferase domain of human g 98.45
PRK05402726 glycogen branching enzyme; Provisional 98.43
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 98.38
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.31
cd0268883 E_set E or "early" set of sugar utilizing enzymes 98.15
cd0286182 E_set_proteins_like E or "early" set-like proteins 98.14
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 97.96
COG1649418 Uncharacterized protein conserved in bacteria [Fun 97.69
PF02324809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 97.49
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 97.16
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 97.1
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 96.89
PRK145071693 putative bifunctional 4-alpha-glucanotransferase/m 96.87
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 96.87
PF02324 809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 96.78
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 96.67
KOG3625 1521 consensus Alpha amylase [Carbohydrate transport an 96.52
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 96.39
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 96.34
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 96.32
smart0063281 Aamy_C Aamy_C domain. 96.17
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 96.15
PRK14508497 4-alpha-glucanotransferase; Provisional 96.04
cd06600317 GH31_MGAM-like This family includes the following 95.86
cd0285979 AMPKbeta_GBD_like AMP-activated protein kinase (AM 95.71
PF13200316 DUF4015: Putative glycosyl hydrolase domain 95.65
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 95.56
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 95.41
PLN02635538 disproportionating enzyme 95.3
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 95.24
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 95.12
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 95.11
PRK10658665 putative alpha-glucosidase; Provisional 95.08
COG3280889 TreY Maltooligosyl trehalose synthase [Carbohydrat 94.77
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 94.71
PRK10426635 alpha-glucosidase; Provisional 94.09
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 93.79
PRK145101221 putative bifunctional 4-alpha-glucanotransferase/g 93.15
cd06595292 GH31_xylosidase_XylS-like This family represents a 92.79
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 91.97
COG1501772 Alpha-glucosidases, family 31 of glycosyl hydrolas 91.84
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 91.47
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 91.32
cd02857116 CD_pullulan_degrading_enzymes_N_term CD and pullul 91.02
TIGR00217513 malQ 4-alpha-glucanotransferase. This enzyme is kn 89.8
PRK11052695 malQ 4-alpha-glucanotransferase; Provisional 89.75
cd06562348 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c 88.55
PF0915457 DUF1939: Domain of unknown function (DUF1939); Int 88.47
COG3589360 Uncharacterized conserved protein [Function unknow 87.42
cd06563357 GH20_chitobiase-like The chitobiase of Serratia ma 87.3
PLN02950909 4-alpha-glucanotransferase 87.14
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 87.12
PF14488166 DUF4434: Domain of unknown function (DUF4434) 86.77
PLN03244872 alpha-amylase; Provisional 86.74
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 86.62
cd06564326 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( 86.51
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 86.34
cd06565301 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) 86.31
PF02446496 Glyco_hydro_77: 4-alpha-glucanotransferase; InterP 85.55
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 84.89
KOG1065805 consensus Maltase glucoamylase and related hydrola 84.62
cd06568329 GH20_SpHex_like A subgroup of the Glycosyl hydrola 83.82
COG1640520 MalQ 4-alpha-glucanotransferase [Carbohydrate tran 83.71
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 83.35
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 83.18
cd02742303 GH20_hexosaminidase Beta-N-acetylhexosaminidases o 82.85
PF05913357 DUF871: Bacterial protein of unknown function (DUF 82.28
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 81.47
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 80.89
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information 
Probab=100.00  E-value=1.1e-111  Score=992.29  Aligned_cols=647  Identities=43%  Similarity=0.788  Sum_probs=545.6

Q ss_pred             CCCCCCCeEEeCCeEEEEEEcCCCCeEEEEEEeCCCccCCceeeeeecccccCCCCCEEEEEEcCCCCCceeeEEEcCcc
Q 003653           93 GYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKF  172 (805)
Q Consensus        93 g~~~plGa~~~~~~~~F~vwap~a~~v~l~l~~~~d~~~~~~~~~~~l~~~~~~~~gvW~~~v~~~~~g~~Y~y~i~~~~  172 (805)
                      |.+.||||++.++||+|+||||+|++|+|+||+..+   ..+..+++|.   .+++|+|+++|+++.+|.+|+|+|+|.+
T Consensus         2 g~~~~LGa~~~~~g~~F~vwap~A~~V~L~l~~~~~---~~~~~~~~m~---~~~~gvW~~~v~~~~~g~~Y~yrv~g~~   75 (688)
T TIGR02100         2 GMPFPLGATWDGQGVNFALFSANAEKVELCLFDAQG---EKEEARLPLP---ERTDDIWHGYLPGAQPGQLYGYRVHGPY   75 (688)
T ss_pred             CCCcCCCeEEeCCcEEEEEECCCCCEEEEEEEcCCC---CceeeEEecc---cCCCCEEEEEECCCCCCCEEEEEEeeee
Confidence            789999999999999999999999999999996422   1233467774   4578999999999999999999999988


Q ss_pred             CCCCCccccCcccccCcccceeeeccccCCC-------CCC--------CCCCCcceecccCCCCCCCCCCC-CCCCCCC
Q 003653          173 SPQEGHYFDPTKIVLDPYAKAVISRAQFGVL-------GPD--------ENCWPQMACLVPTPEDEFDWEGD-LPLKYPQ  236 (805)
Q Consensus       173 ~~~~g~~~~~~~~~~DPya~~~~~~~~~~~~-------~~~--------~~~~~~~~~~v~~~~~~~~w~~~-~~~~~~~  236 (805)
                      .|..|++|++.++++||||+++..+..++..       .+.        ........++|.+  ..|+|+++ .++..+|
T Consensus        76 ~~~~g~~f~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d--~~~~w~~~~~~p~~~~  153 (688)
T TIGR02100        76 DPENGHRFNPNKLLLDPYAKALDGDLIWDDALFGYRIGHPDQDLSFDERDSAPGMPKAVVVD--PDFDWGGDEQRPRTPW  153 (688)
T ss_pred             CCCCCcccCcCceecCcCceeecCCCcccccccccccccccccccccccccccccCceEEeC--CCCCCCCcccCCCCCc
Confidence            8899999999999999999999765332110       000        0000012345544  35999977 5556689


Q ss_pred             CCcEEEEEeeccccccCCC-CCCCCcChhhhccc--hhHHHHcCCceEEECcccccCcccccccCCcCCCCCcCccCCcc
Q 003653          237 RDLIIYEVHVRGFTRHESS-KTEHPGTYLGVVEK--LDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYST  313 (805)
Q Consensus       237 ~~~vIYei~v~~Ft~~~~s-~~~~~G~~~g~~~~--L~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~~~~~~~wGY~~  313 (805)
                      +++|||||||++|+...++ ....+|||+||+++  |+|||+||||+||||||+++.+.....     .....+||||+|
T Consensus       154 ~d~iIYE~hvr~Ft~~~~~~~~~~~Gtf~Gi~~~~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~-----~~~~~~ywGYd~  228 (688)
T TIGR02100       154 EDTIIYEAHVKGFTQLHPDIPEELRGTYAGLAHPAMIDYLKKLGVTAVELLPVHAFIDDRHLL-----EKGLRNYWGYNT  228 (688)
T ss_pred             cccEEEEEEhHHhcCCCCCCCcccccCHHHHhccchhHHHHHcCCCEEEECCcccCCcccccc-----ccCCCCccCcCc
Confidence            9999999999999985433 34578999999996  999999999999999999986432110     011245799999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHcCCEEEEEEecccccCCCCCCCccccCCCCCccceeeCCC--CCc
Q 003653          314 INYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPK--GEF  391 (805)
Q Consensus       314 ~~y~~~~~~ygt~~~~~~~~~~~~e~k~lV~~aH~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~--g~~  391 (805)
                      .+||+|+++||++       ++++|||+||++||++||+|||||||||++.++..++..++++.++..||+..++  +.+
T Consensus       229 ~~y~a~d~~y~~~-------g~~~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~~~~~~  301 (688)
T TIGR02100       229 LGFFAPEPRYLAS-------GQVAEFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFRGIDNASYYRLQPDDKRYY  301 (688)
T ss_pred             ccccccChhhcCC-------CCHHHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccccCCCCCcceEecCCCCcee
Confidence            9999999999873       3699999999999999999999999999998887777788899998899988765  678


Q ss_pred             cccCCCccccCCCCHHHHHHHHHHHHHHHHcCceeEEEEccccccccCCCccccccccCccccCcccccCCCCCChHHHH
Q 003653          392 YNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLID  471 (805)
Q Consensus       392 ~~~~g~~~~ln~~~~~vr~~i~d~l~~W~~e~gvDGfR~D~a~~l~~~~~~w~~~~~~g~~~~~~~~~~g~~~~~~~~~~  471 (805)
                      .++++|++++|+++|+||++|+++++||+++|||||||||+|+.|.+...-+.                    ...++++
T Consensus       302 ~~~~g~gn~ln~~~p~vr~~i~d~l~~W~~e~gIDGfR~D~a~~l~~~~~~~~--------------------~~~~~~~  361 (688)
T TIGR02100       302 INDTGTGNTLNLSHPRVLQMVMDSLRYWVTEMHVDGFRFDLATTLGRELYGFD--------------------MLSGFFT  361 (688)
T ss_pred             cCCCCccccccCCCHHHHHHHHHHHHHHHHHcCCcEEEEechhhhccccCCCc--------------------ccHHHHH
Confidence            89999999999999999999999999999999999999999999975321000                    0235888


Q ss_pred             HHhcCCCCCCceeeeeecCCC-CcccccccCCCCcccccchhHHHHHHHHHhCCCCcHHHHHHHHhCCCCccCCCCCCCC
Q 003653          472 LISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPW  550 (805)
Q Consensus       472 ~i~~d~~~~~~~ligE~w~~~-~~~~~~~~~~~~~~~~~n~~f~~~lr~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~p~  550 (805)
                      +|+.++++++++||||.|+.+ +.++.+.|+.  .+++||+.|++.+|.|++|+.+...+|+.+++++...|......|.
T Consensus       362 ~i~~d~~~~~~~ligE~W~~~~~~~~~~~~~~--~~~~~Nd~frd~ir~f~~g~~~~~~~~~~~l~gs~~~~~~~~~~~~  439 (688)
T TIGR02100       362 AIRQDPVLAQVKLIAEPWDIGPGGYQVGNFPP--GWAEWNDRYRDDMRRFWRGDAGMIGELANRLTGSSDLFEHNGRRPW  439 (688)
T ss_pred             HHHhCcccCCeEEEEeeecCCCCcccccCCCC--ceEEecHHHHHHHHHHHcCCCCcHHHHHHHHhCCHhhccccCCCcC
Confidence            999999999999999999977 5677777764  5799999999999999999988999999999999888876556789


Q ss_pred             ceeeecccCCCcchHHHHhhcccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 003653          551 NSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMIS  630 (805)
Q Consensus       551 ~~vnfv~nHD~~rl~d~~~~~~k~n~~~ge~~~dg~~~n~sw~~g~~~~~~~~~~~~~~~~~~r~a~alllt~pGiP~Iy  630 (805)
                      ++||||++||++||+|+++++.|||+++|++|+||.++|+|||||.||++....+..+|++++|+++++|||+||+||||
T Consensus       440 ~~iNyv~~HD~~tl~D~~~~~~khn~~nge~n~dg~~~N~S~n~g~eG~~~~~~~~~~r~~~~r~~~a~l~~s~GiP~i~  519 (688)
T TIGR02100       440 ASINFVTAHDGFTLRDLVSYNEKHNEANGENNRDGHNDNYSWNCGVEGPTDDPAINALRRRQQRNLLATLLLSQGTPMLL  519 (688)
T ss_pred             EEEEEEeCCCCchHHHHHHhhccchhhccccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCceee
Confidence            99999999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCcccccCCcccCChhHHHHHHHHHHHHHhhCcCCCCCCCCCc-------cceee---cCC
Q 003653          631 MGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTA-------DRLQW---HGH  700 (805)
Q Consensus       631 ~GdE~G~~~~g~~n~y~~d~~~~~~~W~~~~~~~~~l~~~~~~Li~lRk~~~aL~~g~~~~~-------~~i~~---~~~  700 (805)
                      ||||+|+++.|++|+||+++++++|+|++...+ .++++|+|+||+|||+||+|+.+++...       ++|+|   +|.
T Consensus       520 ~GdE~g~t~~G~~n~y~~~~~~~~~dW~~~~~~-~~l~~~~k~Li~lRk~~~~l~~~~~~~~~~~~~~~~~v~~~~~~G~  598 (688)
T TIGR02100       520 AGDEFGRTQQGNNNAYCQDNEIGWVDWSLDEGD-DELLAFTKKLIALRKAHPVLRRERFFDGRNEADGLKDVTWLNADGE  598 (688)
T ss_pred             ecHhhccCCCCCCCCccCCCcccccCccccccc-HHHHHHHHHHHHHHHhCchhcccccccCCcccCCCCceEEeCCCCC
Confidence            999999999999999999999999999977666 8999999999999999999999987643       56899   888


Q ss_pred             CCCCCCCCC-CCcEEEEEEEcCC-------CCEEEEEEeCCCCcEEEEcCCCCCCceEEEecCCCCCCCCccCCCCchhh
Q 003653          701 APGLPDWSD-KSRFVAFTLIDSV-------KGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKE  772 (805)
Q Consensus       701 ~~~~~~~~~-~~~vlaf~R~~~~-------~~~~~Vv~N~~~~~~~v~Lp~~~g~~w~~v~~t~~~~~~~~~~~~~~~~~  772 (805)
                      .+..++|.. ..++++|.+....       .+.++|++|.+.+++++.||..+ ..|.++++|....+..+.  .     
T Consensus       599 ~~~~~~w~~~~~~~l~~~l~~~~~~~~~~~~~~~~v~~N~~~~~~~~~lP~~~-~~w~~~~dt~~~~~~~~~--~-----  670 (688)
T TIGR02100       599 PMTEEDWENPETRLLCMVLSDMDPGGDPGADDSLLLLLNAGPEPVPFKLPGGG-GRWELVLDTADEEAPGIH--L-----  670 (688)
T ss_pred             cCChhhcCCCCCCEEEEEEeCCccCCCCCCCCeEEEEECCCCCCeEEECCCCC-CcEEEEecCCCCCCcccc--c-----
Confidence            888888976 3699999987532       14699999999999999999743 589999999654322210  0     


Q ss_pred             hhhhhccCCCCceeEEeeCCeEEEEEe
Q 003653          773 IAIKQYAPFLDANLYPMLSYSSIILLL  799 (805)
Q Consensus       773 ~~~~~~~~~~~~~~~~v~~~s~~vl~~  799 (805)
                               .....+.|+|+|++||+.
T Consensus       671 ---------~~~~~~~v~~~s~~vl~~  688 (688)
T TIGR02100       671 ---------DAGQEAELPARSVLLLRR  688 (688)
T ss_pred             ---------cCCCEEEEcCCEEEEEeC
Confidence                     123579999999999973

This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>PF14872 GHL5: Hypothetical glycoside hydrolase 5 Back     alignment and domain information
>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain Back     alignment and domain information
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain Back     alignment and domain information
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain Back     alignment and domain information
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain Back     alignment and domain information
>cd02855 Glycogen_branching_enzyme_N_term Glycogen branching enzyme N-terminus domain Back     alignment and domain information
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants Back     alignment and domain information
>cd02858 Esterase_N_term Esterase N-terminal domain Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>cd02688 E_set E or "early" set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies Back     alignment and domain information
>cd02861 E_set_proteins_like E or "early" set-like proteins Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>PRK14508 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD) Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02635 disproportionating enzyme Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02857 CD_pullulan_degrading_enzymes_N_term CD and pullulan-degrading enzymes N-terminus domain Back     alignment and domain information
>TIGR00217 malQ 4-alpha-glucanotransferase Back     alignment and domain information
>PRK11052 malQ 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>PF09154 DUF1939: Domain of unknown function (DUF1939); InterPro: IPR015237 This entry represents a C-terminal domain associated with prokaryotic alpha-amylases Back     alignment and domain information
>COG3589 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>PLN02950 4-alpha-glucanotransferase Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins Back     alignment and domain information
>PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) Back     alignment and domain information
>COG1640 MalQ 4-alpha-glucanotransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query805
2vnc_A718 Crystal Structure Of Glycogen Debranching Enzyme Tr 1e-131
2wsk_A657 Crystal Structure Of Glycogen Debranching Enzyme Gl 1e-108
1bf2_A750 Structure Of Pseudomonas Isoamylase Length = 750 9e-77
2wan_A921 Pullulanase From Bacillus Acidopullulyticus Length 6e-43
2e8y_A718 Crystal Structure Of Pullulanase Type I From Bacill 2e-35
2ya2_A708 Catalytic Module Of The Multi-Modular Glycogen-Degr 9e-31
2ya0_A714 Catalytic Module Of The Multi-Modular Glycogen-Degr 1e-30
2ya1_A1014 Product Complex Of A Multi-Modular Glycogen-Degradi 1e-30
3faw_A877 Crystal Structure Of The Group B Streptococcus Pull 2e-27
1eha_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 2e-19
3vgg_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 2e-19
1eh9_A558 Crystal Structure Of Sulfolobus Solfataricus Glycos 2e-19
3vgd_A558 Ctystal Structure Of Glycosyltrehalose Trehalohydro 6e-19
3vge_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 9e-19
2y4s_A884 Barley Limit Dextrinase In Complex With Beta-Cyclod 4e-16
3m07_A618 1.4 Angstrom Resolution Crystal Structure Of Putati 1e-15
2bhu_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 4e-13
2fhb_A1083 Crystal Structure Analysis Of Klebsiella Pneumoniae 5e-12
2fh6_A920 Crystal Structure Analysis Of Klebsiella Pneumoniae 5e-12
2fh8_A922 Crystal Structure Analysis Of Klebsiella Pneumoniae 6e-12
2fgz_A926 Crystal Structure Analysis Of Apo Pullulanase From 7e-12
2bhy_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 2e-11
1wza_A488 Crystal Structure Of Alpha-Amylase From H.Orenii Le 7e-11
4gkl_A422 Crystal Structure Of A Noncanonic Maltogenic Alpha- 2e-10
2wc7_A488 Crystal Structure Of Nostoc Punctiforme Debranching 4e-10
3k1d_A722 Crystal Structure Of Glycogen Branching Enzyme Syno 1e-09
1sma_A588 Crystal Structure Of A Maltogenic Amylase Length = 2e-09
1gvi_A588 Thermus Maltogenic Amylase In Complex With Beta-Cd 2e-09
3dhu_A449 Crystal Structure Of An Alpha-Amylase From Lactobac 2e-09
1ea9_C583 Cyclomaltodextrinase Length = 583 4e-09
1wzk_A585 Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (T 7e-09
1jf5_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 1e-08
1m53_A570 Crystal Structure Of Isomaltulose Synthase (Pali) F 1e-08
1g1y_A585 Crystal Structure Of Alpha-Amylase Ii (Tvaii) From 2e-08
1jf6_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 2e-08
1bvz_A585 Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vul 2e-08
1wzm_A585 Thermoactinomyces Vulgaris R-47 Alpha-amylase Ii (t 3e-08
1uok_A558 Crystal Structure Of B. Cereus Oligo-1,6-Glucosidas 3e-08
1j0j_A588 Crystal Structure Of Neopullulanase E357q Complex W 3e-08
1j0h_A588 Crystal Structure Of Bacillus Stearothermophilus Ne 3e-08
1wzl_A585 Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (T 4e-08
1jl8_A585 Complex Of Alpha-Amylase Ii (Tva Ii) From Thermoact 8e-08
3gbd_A558 Crystal Structure Of The Isomaltulose Synthase Smua 2e-07
2ze0_A555 Alpha-glucosidase Gsj Length = 555 3e-07
2z1k_A475 Crystal Structure Of Ttha1563 From Thermus Thermoph 4e-07
1vfm_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 5e-07
4aef_A645 The Crystal Structure Of Thermostable Amylase From 1e-06
4gi6_A557 Crystal Structure Of The Mutb F164l Mutant In Compl 3e-06
1zja_A557 Crystal Structure Of The Trehalulose Synthase Mutb 3e-06
1lwh_A441 Crystal Structure Of T. Maritima 4-Alpha-Glucanotra 3e-06
2pwe_A556 Crystal Structure Of The Mutb E254q Mutant In Compl 3e-06
4h2c_A557 Trehalulose Synthase Mutb R284c Mutant Length = 557 3e-06
2pwg_A556 Crystal Structure Of The Trehalulose Synthase Mutb 3e-06
4gin_A584 Crystal Structure Of The Mutb R284c Mutant From Cry 4e-06
1m7x_A617 The X-Ray Crystallographic Structure Of Branching E 2e-05
3aml_A755 Structure Of The Starch Branching Enzyme I (Bei) Fr 2e-05
3amk_A702 Structure Of The Starch Branching Enzyme I (Bei) Fr 2e-05
2pwf_A556 Crystal Structure Of The Mutb D200a Mutant In Compl 3e-05
3k8l_A669 Crystal Structure Of Susg-D498n Mutant With Maltohe 4e-05
4aee_A696 Crystal Structure Of Maltogenic Amylase From S.Mari 5e-05
1cyg_A680 Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgt 8e-05
3k8k_A669 Crystal Structure Of Susg Length = 669 1e-04
2zid_A543 Crystal Structure Of Dextran Glucosidase E236q Comp 3e-04
2zic_A543 Crystal Structure Of Streptococcus Mutans Dextran G 3e-04
4cgt_A678 Deletion Mutant Delta(145-150), F151d Of Cyclodextr 3e-04
6cgt_A684 Hoxa Complex Of Cyclodextrin Glycosyltransferase Mu 7e-04
4aie_A549 Structure Of Glucan-1,6-Alpha-Glucosidase From Lact 7e-04
3ucq_A655 Crystal Structure Of Amylosucrase From Deinococcus 9e-04
>pdb|2VNC|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus Length = 718 Back     alignment and structure 
Iteration: 1

 Score =  464 bits (1194), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 292/722 (40%), Positives = 389/722 (53%), Gaps = 98/722 (13%)
Query: 93  GYPTPFGATL--RDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDV 150
           G P P G+     D GVNFS+FS NA    L L +L++ +  K   E+      NKTGD+
Sbjct: 15  GDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQKYPKEIIEVK-----NKTGDI 69
Query: 151 WHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV-----ISRAQFGVLGP 205
           WHVF+ G     LY Y+  G + P+ G  F+P K+++DPYAKA+      + A FG    
Sbjct: 70  WHVFVPGLRPGQLYAYRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKIG 129
Query: 206 DEN------------CWPQMACLVPTPEDEFDWEGDLPLK---YPQRDLIIYEVHVRGFT 250
           D+N              P+   + P     F+W+ +  +K    P +D +IYEVHV+GFT
Sbjct: 130 DQNQDLTYDERDSGEYVPKSVVINPY----FEWDDEDFIKGKKVPLKDTVIYEVHVKGFT 185
Query: 251 RHESSKTEH-PGTYLGVV--EKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVN 307
           +      E+  GTY G+   + + +LKDLGI  +ELMP   F +  + +   +      N
Sbjct: 186 KLRLDLPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGL-----TN 240
Query: 308 FWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGND 367
           +WGY  IN+FSP   YSS G   C    +  FK +V E H  GIEV++DVV+NHT EGN 
Sbjct: 241 YWGYDPINFFSPECRYSSTG---CLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNH 297
Query: 368 KGPILSFRGVDNSVYYMLAPKGEFY--NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHV 425
            GP LSFRG+DN+ YYML P  + Y  +++G GNT N +HP V Q ++D LRYWVTEMHV
Sbjct: 298 LGPTLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHV 357
Query: 426 DGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLI 485
           DGFRFDLA+ + R     + +N + I ++                     DPIL  VKLI
Sbjct: 358 DGFRFDLAAALARELYSVNMLNTFFIALQ--------------------QDPILSQVKLI 397
Query: 486 AEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQG 544
           AE WD G G YQVG FP+   W+EWNGKYRD +R+F +G        A  L GSP++Y G
Sbjct: 398 AEPWDVGQGGYQVGNFPYQ--WAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLG 455
Query: 545 GGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANIL 604
             + P+ SIN+V +HDGF+L DLVSYNQKHN ANG +N DG   N SWNCG EG   +  
Sbjct: 456 NNKTPFASINYVTSHDGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQN 515
Query: 605 VKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESK 664
           V   R +Q RNF + L+VSQG PMI  GDE   T+ GNNN +C DN+I +F W+  +E K
Sbjct: 516 VVICREKQKRNFMITLLVSQGTPMILGGDELSRTQRGNNNAFCQDNEITWFDWN-LDERK 574
Query: 665 SDFFRFCCLLTK-------FRHECESLG--LSDFPTADRLQW--HGHAPGLPDWSDKSRF 713
           S F  F   + +       FR E    G  L   P  D   +   G       WS  ++ 
Sbjct: 575 SKFLEFVKKMIQFYRAHPAFRRERYFQGKKLFGMPLKDVTFYTLEGREVDEKTWSSPTQL 634
Query: 714 VAFTLIDSVKGEI------------YVAFNASHLPVIISLPKRPGYRWEPLVDTS----K 757
           V F L  SV  EI             +  NA+   V +  PK    +WE ++ +     K
Sbjct: 635 VIFVLEGSVMDEINMYGERIADDSFLIILNANPNNVKVKFPKG---KWELVISSYLREIK 691
Query: 758 PE 759
           PE
Sbjct: 692 PE 693
>pdb|2WSK|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Glgx From Escherichia Coli K-12 Length = 657 Back     alignment and structure
>pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 Back     alignment and structure
>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus Length = 921 Back     alignment and structure
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus Subtilis Str. 168 Length = 718 Back     alignment and structure
>pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 Back     alignment and structure
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 Back     alignment and structure
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 Back     alignment and structure
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase Sap Length = 877 Back     alignment and structure
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus Length = 558 Back     alignment and structure
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (E283q) Complexed With Maltoheptaose Length = 558 Back     alignment and structure
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase Length = 558 Back     alignment and structure
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase (D252e) Length = 558 Back     alignment and structure
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (D252s) Length = 558 Back     alignment and structure
>pdb|2Y4S|A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin Length = 884 Back     alignment and structure
>pdb|3M07|A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative Alpha Amylase From Salmonella Typhimurium Length = 618 Back     alignment and structure
>pdb|2BHU|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase Length = 602 Back     alignment and structure
>pdb|2FHB|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae Pullulanase Complexed With Maltose Length = 1083 Back     alignment and structure
>pdb|2BHY|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase In Complex With Trehalose Length = 602 Back     alignment and structure
>pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii Length = 488 Back     alignment and structure
>pdb|4GKL|A Chain A, Crystal Structure Of A Noncanonic Maltogenic Alpha-amylase Amyb From Thermotoga Neapolitana Length = 422 Back     alignment and structure
>pdb|2WC7|A Chain A, Crystal Structure Of Nostoc Punctiforme Debranching Enzyme( Npde)(Acarbose Soaked) Length = 488 Back     alignment and structure
>pdb|3K1D|A Chain A, Crystal Structure Of Glycogen Branching Enzyme Synonym: 1,4- Glucan:1,4-Alpha-D-Glucan 6-Glucosyl-Transferase From Mycob Tuberculosis H37rv Length = 722 Back     alignment and structure
>pdb|1SMA|A Chain A, Crystal Structure Of A Maltogenic Amylase Length = 588 Back     alignment and structure
>pdb|1GVI|A Chain A, Thermus Maltogenic Amylase In Complex With Beta-Cd Length = 588 Back     alignment and structure
>pdb|3DHU|A Chain A, Crystal Structure Of An Alpha-Amylase From Lactobacillus Plantarum Length = 449 Back     alignment and structure
>pdb|1EA9|C Chain C, Cyclomaltodextrinase Length = 583 Back     alignment and structure
>pdb|1WZK|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (Tva Ii) Mutatnt D465n Length = 585 Back     alignment and structure
>pdb|1JF5|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase 2 Mutant F286a Length = 585 Back     alignment and structure
>pdb|1M53|A Chain A, Crystal Structure Of Isomaltulose Synthase (Pali) From Klebsiella Sp. Lx3 Length = 570 Back     alignment and structure
>pdb|1G1Y|A Chain A, Crystal Structure Of Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vulgaris R-47 And Beta-Cyclodextrin Complex Length = 585 Back     alignment and structure
>pdb|1JF6|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase Mutant F286y Length = 585 Back     alignment and structure
>pdb|1BVZ|A Chain A, Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vulgaris R- 47 Length = 585 Back     alignment and structure
>pdb|1WZM|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-amylase Ii (tva Ii) Mutatnt R469k Length = 585 Back     alignment and structure
>pdb|1UOK|A Chain A, Crystal Structure Of B. Cereus Oligo-1,6-Glucosidase Length = 558 Back     alignment and structure
>pdb|1J0J|A Chain A, Crystal Structure Of Neopullulanase E357q Complex With Maltotetraose Length = 588 Back     alignment and structure
>pdb|1J0H|A Chain A, Crystal Structure Of Bacillus Stearothermophilus Neopullulanase Length = 588 Back     alignment and structure
>pdb|1WZL|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (Tva Ii) Mutatnt R469l Length = 585 Back     alignment and structure
>pdb|1JL8|A Chain A, Complex Of Alpha-Amylase Ii (Tva Ii) From Thermoactinomyces Vulgaris R-47 With Beta-Cyclodextrin Based On A Co- Crystallization With Methyl Beta-Cyclodextrin Length = 585 Back     alignment and structure
>pdb|3GBD|A Chain A, Crystal Structure Of The Isomaltulose Synthase Smua From Protaminobacter Rubrum Length = 558 Back     alignment and structure
>pdb|2ZE0|A Chain A, Alpha-glucosidase Gsj Length = 555 Back     alignment and structure
>pdb|2Z1K|A Chain A, Crystal Structure Of Ttha1563 From Thermus Thermophilus Hb8 Length = 475 Back     alignment and structure
>pdb|1VFM|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase 2ALPHA-Cyclodextrin Complex Length = 585 Back     alignment and structure
>pdb|4AEF|A Chain A, The Crystal Structure Of Thermostable Amylase From The Pyrococcus Length = 645 Back     alignment and structure
>pdb|4GI6|A Chain A, Crystal Structure Of The Mutb F164l Mutant In Complex With Glucose Length = 557 Back     alignment and structure
>pdb|1ZJA|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From Pseudomonas Mesoacidophila Mx-45 (Triclinic Form) Length = 557 Back     alignment and structure
>pdb|1LWH|A Chain A, Crystal Structure Of T. Maritima 4-Alpha-Glucanotransferase Length = 441 Back     alignment and structure
>pdb|2PWE|A Chain A, Crystal Structure Of The Mutb E254q Mutant In Complex With The Substrate Sucrose Length = 556 Back     alignment and structure
>pdb|4H2C|A Chain A, Trehalulose Synthase Mutb R284c Mutant Length = 557 Back     alignment and structure
>pdb|2PWG|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From Pseudomonas Mesoacidophila Mx-45 Complexed To The Inhibitor Castanospermine Length = 556 Back     alignment and structure
>pdb|4GIN|A Chain A, Crystal Structure Of The Mutb R284c Mutant From Crystals Soaked With The Inhibitor Deoxynojirimycin Length = 584 Back     alignment and structure
>pdb|1M7X|A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme Length = 617 Back     alignment and structure
>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 755 Back     alignment and structure
>pdb|3AMK|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 702 Back     alignment and structure
>pdb|2PWF|A Chain A, Crystal Structure Of The Mutb D200a Mutant In Complex With Glucose Length = 556 Back     alignment and structure
>pdb|3K8L|A Chain A, Crystal Structure Of Susg-D498n Mutant With Maltoheptaose Length = 669 Back     alignment and structure
>pdb|4AEE|A Chain A, Crystal Structure Of Maltogenic Amylase From S.Marinus Length = 696 Back     alignment and structure
>pdb|1CYG|A Chain A, Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgtase) Length = 680 Back     alignment and structure
>pdb|3K8K|A Chain A, Crystal Structure Of Susg Length = 669 Back     alignment and structure
>pdb|2ZID|A Chain A, Crystal Structure Of Dextran Glucosidase E236q Complex With Isomaltotriose Length = 543 Back     alignment and structure
>pdb|2ZIC|A Chain A, Crystal Structure Of Streptococcus Mutans Dextran Glucosidase Length = 543 Back     alignment and structure
>pdb|4CGT|A Chain A, Deletion Mutant Delta(145-150), F151d Of Cyclodextrin Glycosyltransferase Length = 678 Back     alignment and structure
>pdb|6CGT|A Chain A, Hoxa Complex Of Cyclodextrin Glycosyltransferase Mutant Length = 684 Back     alignment and structure
>pdb|4AIE|A Chain A, Structure Of Glucan-1,6-Alpha-Glucosidase From Lactobacillus Acidophilus Ncfm Length = 549 Back     alignment and structure
>pdb|3UCQ|A Chain A, Crystal Structure Of Amylosucrase From Deinococcus Geothermalis Length = 655 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query805
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 0.0
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 0.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 0.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 0.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 0.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 0.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 0.0
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 0.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 0.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 1e-161
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 1e-36
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 1e-35
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 2e-35
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 7e-29
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 1e-25
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 2e-24
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 5e-23
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 4e-04
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 6e-23
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 1e-04
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 2e-22
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 1e-21
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 4e-21
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 9e-21
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 2e-04
3aml_A755 OS06G0726400 protein; starch-branching, transferas 9e-21
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 1e-20
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 1e-20
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 2e-20
1d3c_A686 Cyclodextrin glycosyltransferase; alpha-amylase, p 3e-20
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 1e-19
1qho_A686 Alpha-amylase; glycoside hydrolase, starch degrada 3e-19
3bmv_A683 Cyclomaltodextrin glucanotransferase; glycosidase, 7e-19
1cyg_A680 Cyclodextrin glucanotransferase; glycosyltransfera 7e-19
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 2e-17
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 7e-17
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 9e-17
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 1e-16
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 2e-15
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 4e-15
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 4e-15
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 4e-15
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 6e-15
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 6e-14
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 7e-14
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 3e-05
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 7e-14
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 1e-13
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 3e-13
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 8e-13
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 4e-12
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 8e-12
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 1e-11
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 1e-04
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 2e-11
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 3e-04
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 4e-11
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 2e-10
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 2e-10
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 3e-10
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 5e-10
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 5e-10
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 1e-09
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 2e-09
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 2e-08
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 2e-08
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 2e-07
1hx0_A496 Alpha amylase (PPA); inhibitor, carbohydrate, panc 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
 Score =  900 bits (2328), Expect = 0.0
 Identities = 231/689 (33%), Positives = 336/689 (48%), Gaps = 70/689 (10%)

Query: 89  QVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTG 148
           Q++ G P P GA     GVNF++FS++A    LC+        N       L      +G
Sbjct: 3   QLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFD-----ANGQEHRYDLP---GHSG 54

Query: 149 DVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVI-----SRAQFGVL 203
           D+WH +L      + YGY+  G + P EGH F+P K+++DP A+ +      +       
Sbjct: 55  DIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHA-- 112

Query: 204 GPDENCWPQMACLVPT---PEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTR-HESSKTEH 259
           G +E  +   A + P      D +DWE D P + P    IIYE HV+G T  H     E 
Sbjct: 113 GHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEI 172

Query: 260 PGTYLGVVEK--LDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYKVNFWGYSTINYF 317
            GTY  +     +++LK LGI  LEL+P  +F          +      N+WGY+ +  F
Sbjct: 173 RGTYKALGHPVMINYLKQLGITALELLPVAQFASEPR-----LQRMGLSNYWGYNPVAMF 227

Query: 318 SPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGV 377
           +   +Y+ +        A++EF+  ++  HK GIEV++D+V NH+ E +  GP+ S RG+
Sbjct: 228 ALHPAYACSP-----ETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGI 282

Query: 378 DNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMT 437
           DN  YY +   G+++N++GCGNT N +HP V  +   CLRYWV   HVDGFRFDLA++M 
Sbjct: 283 DNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMG 342

Query: 438 RGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTG-GLYQ 496
           R               E          +  PL   I N P+L  VKLIAE WD   G YQ
Sbjct: 343 RTP-------------EFR--------QDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQ 381

Query: 497 VGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFV 556
           VG FP    ++EWN  +RD  R+F    D   GAFA     S ++++  GR P  +IN V
Sbjct: 382 VGNFPPL--FAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLV 439

Query: 557 CAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNF 616
            AHDGF+L D V +N KHN ANGE+N DG  +N S N G+EG   ++ + + RR  +   
Sbjct: 440 TAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHAL 499

Query: 617 FLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTK 676
              L++SQG PM+  GDE+GH++ GNNN YC DN + +  W +          F   L  
Sbjct: 500 LTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASS---GLTAFTAALIH 556

Query: 677 FRHECESLGLSDFPTADR-----LQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFN 731
            R    +L  + +          L  +       +W +  + +   L D       +A N
Sbjct: 557 LRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDR----FLIAIN 612

Query: 732 ASHLPVIISLPKRPGYRWEPLVDTSKPEP 760
           A+     I LP      W  +   +  + 
Sbjct: 613 ATLEVTEIVLPAGE---WHAIPPFAGEDN 638
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Length = 695 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Length = 686 Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Length = 441 Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Length = 515 Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Length = 637 Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Length = 628 Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Length = 669 Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Length = 669 Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Length = 488 Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Length = 617 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Length = 644 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Length = 722 Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Length = 543 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Length = 424 Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Length = 558 Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Length = 589 Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Length = 570 Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Length = 557 Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Length = 555 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Length = 704 Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Length = 720 Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Length = 504 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 Back     alignment and structure
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A* ... Length = 496 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 805
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 1e-105
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 8e-68
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 2e-53
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 1e-52
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 6e-41
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 1e-39
d1g5aa2554 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc 3e-39
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 3e-37
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 2e-36
d1jaea2378 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea 7e-34
d1hx0a2403 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s 1e-31
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 2e-31
d1wzla3382 c.1.8.1 (A:121-502) Maltogenic amylase, central do 3e-30
d1gcya2357 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m 2e-28
d2guya2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 3e-28
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 7e-28
d1ud2a2390 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu 1e-27
d1ht6a2347 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor 1e-27
d1e43a2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera 5e-26
d1ea9c3382 c.1.8.1 (C:122-503) Maltogenic amylase, central do 2e-25
d1g94a2354 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa 2e-25
d2aaaa2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 3e-25
d1iv8a2653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 3e-24
d1hvxa2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu 5e-24
d1lwha2391 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther 1e-23
d1mxga2361 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo 2e-23
d1r7aa2434 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac 3e-23
d2d3na2394 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu 4e-23
d1h3ga3422 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d 6e-23
d1qhoa4407 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase 1e-22
d1ua7a2344 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu 1e-22
d3bmva4406 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase 2e-21
d1ji1a3432 c.1.8.1 (A:123-554) Maltogenic amylase, central do 2e-19
d2fhfa1115 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella 7e-19
d1bf2a1162 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N 2e-14
d1bf2a2113 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amylo 1e-11
d1eh9a190 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrola 2e-06
d2bhua197 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydro 6e-06
d1m7xa1110 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching en 2e-04
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

 Score =  329 bits (844), Expect = e-105
 Identities = 161/474 (33%), Positives = 217/474 (45%), Gaps = 30/474 (6%)

Query: 235 PQRDLIIYEVHVRGFTRHESSKTE-HPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELE 293
            Q+D +IYEVHVRGFT  ++S    + GTY G   K  +L  LG+  +E +P  E     
Sbjct: 13  AQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQN-- 70

Query: 294 YFSYNSVLGDYKVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEV 353
             +      D   N+WGY T NYFSP   Y+             EF+ +V+  H  GI+V
Sbjct: 71  DANDVVPNSDANQNYWGYMTENYFSPDRRYAYN---KAAGGPTAEFQAMVQAFHNAGIKV 127

Query: 354 VMDVVFNHTVEG-------NDKGPILSFRGVDNSVYYMLA-PKGEFYNYSGCGNTFNCNH 405
            MDVV+NHT EG            I S+RG+DN+ YY L      FY+ +G G  FN  +
Sbjct: 128 YMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYN 187

Query: 406 PVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDS----VNVYGIPIEGDLLTTG 461
            V +  IVD L YW   M VDGFRFDLAS++              N        D   + 
Sbjct: 188 TVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFDAADSN 247

Query: 462 TPLRSPPLIDLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQF 520
             +        +       G+ L AE W  G   YQ+G FP    WSEWNG +RD +RQ 
Sbjct: 248 VAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQG--WSEWNGLFRDSLRQA 305

Query: 521 IKGTDG---FAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLA 577
                    +    A    GS NL+Q  GR PWNSINF+  HDG +L D+ S N  +N  
Sbjct: 306 QNELGSMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQ 365

Query: 578 NGE--DNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEY 635
                 ++ G + N SW+ G        +    +RR  R      M+S G P++  GDEY
Sbjct: 366 AWPYGPSDGGTSTNYSWDQGMSAGTGAAV---DQRRAARTGMAFEMLSAGTPLMQGGDEY 422

Query: 636 GHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDF 689
             T   NNN Y  D+  N+  +    +   +F+ F   L  FR    +L  S +
Sbjct: 423 LRTLQCNNNAYNLDSSANWLTYSWTTDQS-NFYTFAQRLIAFRKAHPALRPSSW 475
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 115 Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 162 Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 113 Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 90 Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Length = 97 Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query805
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 100.0
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 100.0
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 100.0
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 100.0
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 100.0
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 100.0
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 100.0
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 100.0
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 100.0
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 100.0
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 100.0
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 100.0
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 100.0
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 100.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 100.0
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 100.0
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 100.0
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 100.0
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 100.0
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 100.0
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 100.0
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 100.0
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 100.0
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 100.0
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 100.0
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 100.0
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 100.0
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 100.0
d1iv8a2 653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 100.0
d1bf2a1162 Isoamylase, N-terminal domain N {Pseudomonas amylo 99.77
d2fhfa1115 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.77
d1m7xa1110 1,4-alpha-glucan branching enzyme, N-terminal doma 99.56
d1eh9a190 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.35
d2bhua197 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.26
d1m7xa2106 1,4-alpha-glucan branching enzyme {Escherichia col 98.95
d1bf2a2113 Isoamylase {Pseudomonas amyloderamosa [TaxId: 3204 98.77
d1x1na1523 Amylomaltase MalQ {Potato (Solanum tuberosum) [Tax 98.5
d1tz7a1485 Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363] 98.42
d1eswa_500 Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} 98.39
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 98.39
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 98.3
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.23
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.22
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 98.2
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 98.14
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 97.99
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 97.93
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 97.37
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 97.35
d2fhfa4118 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 97.2
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 97.16
d1qbaa3443 Bacterial chitobiase (beta-N-acetylhexosaminidase) 96.88
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 96.82
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 96.79
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 96.73
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 96.64
d2qlvb187 SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} 96.63
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 96.44
d1nowa1353 beta-hexosaminidase B {Human (Homo sapiens) [TaxId 96.34
d1iv8a2653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 96.24
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 96.18
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 96.09
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 95.97
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 95.81
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 95.77
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 95.76
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 95.61
d1e43a190 Bacterial alpha-Amylase {Bacillus licheniformis [T 95.59
d1z0na187 5'-AMP-activated protein kinase subunit beta-1 {Ra 95.32
d1jaka1356 beta-N-acetylhexosaminidase {Streptomyces plicatus 95.3
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 95.22
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 95.07
d1wzaa179 Bacterial alpha-Amylase {Halothermothrix orenii [T 95.05
d1ud2a190 Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [Ta 95.04
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 95.03
d2d3na187 Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 95.0
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 94.97
d1x7fa2244 Outer surface protein, N-terminal domain {Bacillus 94.96
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 94.9
d2gjxa1362 beta-hexosaminidase A {Human (Homo sapiens) [TaxId 94.68
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 94.38
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 94.36
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 94.25
d1yhta1344 Dispersin B, DspB {Actinobacillus actinomycetemcom 94.21
d1g94a194 Bacterial alpha-Amylase {Pseudoalteromonas halopla 94.2
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 94.04
d1cyga389 Cyclodextrin glycosyltransferase {Bacillus stearot 93.68
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 92.94
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 92.5
d1ji1a1122 Maltogenic amylase, N-terminal domain N {Thermoact 92.25
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 92.19
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 91.86
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 91.82
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 91.02
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 90.06
d1j0ha1123 Neopullulanase, N-terminal domain {Bacillus stearo 90.05
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 88.94
d1ea9c1121 Maltogenic amylase, N-terminal domain N {Bacillus 88.8
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 87.6
d1wzla1120 Maltogenic amylase, N-terminal domain N {Thermoact 87.5
d1hx0a193 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 84.54
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 84.13
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

Probab=100.00  E-value=0  Score=531.89  Aligned_cols=446  Identities=36%  Similarity=0.579  Sum_probs=330.9

Q ss_pred             CCCCCCCCCCCCCCEEEEEEECCCCCCCCCC-CCCCCCHHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9999999999999079999512540258999-998858443303524787718756998744324731101257867899
Q 003653          226 WEGDLPLKYPQRDLIIYEVHVRGFTRHESSK-TEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDY  304 (805)
Q Consensus       226 w~~~~~~~~~~~~~viYei~v~~Ft~~~~s~-~~~~Gt~~gi~~~L~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~~~  304 (805)
                      |.....+..+++++||||||||+|++++++. ..++|||+|+++|||||++||||+||||||++++......  ......
T Consensus         4 ~~~~~~~~~~~~d~viYei~v~~f~~~~~~~~~~~~Gd~~Gi~~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~--~~~~~~   81 (475)
T d1bf2a3           4 QSTGTKPTRAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDV--VPNSDA   81 (475)
T ss_dssp             CCCCCCCCCCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTS--STTCCT
T ss_pred             CCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC--CCCCCC
T ss_conf             989999898875518999882473367999886666789999851599997499989949977187766666--655566


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC-------CCCC
Q ss_conf             867559864324687889988897789988189999999999973989999870033348999998643-------4798
Q 003653          305 KVNFWGYSTINYFSPMISYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILS-------FRGV  377 (805)
Q Consensus       305 ~~~~wGY~~~dy~~id~~ygs~~~~~~~~~~~~elk~lV~~aH~~Gi~VIlDvV~NHt~~~~~~~~~~~-------~~~~  377 (805)
                      ..+||||++.||++|+++|++.+.   ..|+.+|||+||++||++||+||||+|+||++.++.|.....       +++.
T Consensus        82 ~~~y~GY~~~d~~~vdp~y~~~~~---~~Gt~~d~~~LV~~aH~~GIrVilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~  158 (475)
T d1bf2a3          82 NQNYWGYMTENYFSPDRRYAYNKA---AGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGL  158 (475)
T ss_dssp             TCCCSCCCBSCSSCBCGGGCSCCS---TTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             768899884667786765356877---79999999999999985576899970234223777642347876764223676


Q ss_pred             CCCCCEEECC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC------CCC
Q ss_conf             8861023289-997113479866567999899999999999988739565999906662124798664542------248
Q 003653          378 DNSVYYMLAP-KGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVN------VYG  450 (805)
Q Consensus       378 d~~~yy~~~~-~g~~~~~~g~~~~ln~~~p~vr~~i~d~l~~Wi~e~gVDGFRlD~a~~l~~~~~~w~~~~------~~g  450 (805)
                      ....+|.... ...+..+.++.++||+.+|+|++++++++++|++++||||||+|+++++....  |....      ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~gvDGfR~D~~~~~~~~~--~~~~~~~~~~~~~~  236 (475)
T d1bf2a3         159 DNATYYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSC--LNGAYTASAPNCPN  236 (475)
T ss_dssp             HHHHHBCBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBCC--SSSSCCTTSTTCTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCHHH--HCCCHHCCCCCCCC
T ss_conf             4454334688862111577765751010168888889998732221487547872175412233--20210005765766


Q ss_pred             CCCCCCCCCCCCCCCCHHH---HHHHHCC--CCCCCCEEEEEECCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             6445763236999999278---9998519--8777861553104788-86432466788752000426899999999089
Q 003653          451 IPIEGDLLTTGTPLRSPPL---IDLISND--PILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGT  524 (805)
Q Consensus       451 ~~~~~~~~~~g~~~~~~~~---~~~i~~d--~~~~~~~liaE~w~~~-~~~~~~~~~~~~~~~~~n~~f~~~l~~~~~g~  524 (805)
                      ..+..+.     ......+   ...+..+  .......+++|.|+.+ .....+.++.  .+..|+..+.+.++.+....
T Consensus       237 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  309 (475)
T d1bf2a3         237 GGYNFDA-----ADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ--GWSEWNGLFRDSLRQAQNEL  309 (475)
T ss_dssp             CSCCBCT-----TCTTSHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTCCCTTCSCT--TCEEECHHHHHHHHHHHHCB
T ss_pred             CCCCHHH-----HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--CHHHHCCHHHHHHHHHHCCC
T ss_conf             5210444-----4200443046666543210256663300251113665211467751--06775224689999984156


Q ss_pred             ---CCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf             ---9848999999918997647999999750110145787646777751012534479999--99999998877788873
Q 003653          525 ---DGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDN--NDGETHNNSWNCGQEGE  599 (805)
Q Consensus       525 ---~~~~~~~~~~l~g~~~~~~~~~~~p~~~vnfi~nHD~~rl~d~~~~~~~~n~~~ge~~--~dg~~~~~~w~~g~~~~  599 (805)
                         .......+..+.+....+...++.+...+||+.+||+.++.+++.+..+++.......  .++...+.+|+.+....
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hd~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (475)
T d1bf2a3         310 GSMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYGPSDGGTSTNYSWDQGMSAG  389 (475)
T ss_dssp             TTBCCCHHHHHHHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHTTCSSCCCCCCTTSCCCCCCCSCCCCCCTTTTTT
T ss_pred             CCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             63015676655540353233201576777777677750222688876510021576513335577765565433476677


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             10189999999999999999994499237734422257789999877899875545678335770489999999999995
Q 003653          600 FANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRH  679 (805)
Q Consensus       600 ~~~~~~~~~~~~~~k~a~~lllt~pGiP~Iy~GdE~G~~~~g~~n~y~~d~~~~~~~W~~~~~~~~~l~~~~k~Li~lRk  679 (805)
                      .....   .+.+++|++++++||+||+||||||||+|+++.|++|+|+.++.+++++|...+.. +++++++|+|++|||
T Consensus       390 ~~~~~---~~~~~~r~~~~~llt~pGiP~iyyGdE~g~~~~g~~~~y~~~~~~~~~~~~~~~~~-~~l~~~~~~Li~lR~  465 (475)
T d1bf2a3         390 TGAAV---DQRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTYSWTTDQ-SNFYTFAQRLIAFRK  465 (475)
T ss_dssp             SCCHH---HHHHHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSCCTTCCSTTTSCCCCCCHHH-HHHHHHHHHHHHHHH
T ss_pred             CCHHH---HHHHHHHHHHHHHHHHCCCHHEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHH
T ss_conf             52058---99999999999999825633014177548467897665458986675588755034-799999999999985


Q ss_pred             HCCCCCCCCC
Q ss_conf             1758899998
Q 003653          680 ECESLGLSDF  689 (805)
Q Consensus       680 ~~paL~~g~~  689 (805)
                      ++|||+.++|
T Consensus       466 ~~paLr~~~~  475 (475)
T d1bf2a3         466 AHPALRPSSW  475 (475)
T ss_dssp             HCGGGSCSSC
T ss_pred             CCHHHCCCCC
T ss_conf             3853278989
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1tz7a1 c.1.8.1 (A:1-485) Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d2fhfa4 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} Back     information, alignment and structure
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1ji1a1 b.1.18.2 (A:1-122) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j0ha1 b.1.18.2 (A:1-123) Neopullulanase, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ea9c1 b.1.18.2 (C:1-121) Maltogenic amylase, N-terminal domain N {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1wzla1 b.1.18.2 (A:1-120) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure