Citrus Sinensis ID: 003740
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 799 | 2.2.26 [Sep-21-2011] | |||||||
| Q37145 | 1020 | Calcium-transporting ATPa | yes | no | 0.982 | 0.769 | 0.810 | 0.0 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.977 | 0.770 | 0.787 | 0.0 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | yes | no | 0.982 | 0.769 | 0.779 | 0.0 | |
| O64806 | 1015 | Putative calcium-transpor | no | no | 0.977 | 0.769 | 0.776 | 0.0 | |
| Q6ATV4 | 1033 | Calcium-transporting ATPa | no | no | 0.913 | 0.706 | 0.703 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.979 | 0.753 | 0.624 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.967 | 0.754 | 0.617 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.969 | 0.752 | 0.619 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.949 | 0.746 | 0.610 | 0.0 | |
| Q8RUN1 | 1043 | Calcium-transporting ATPa | no | no | 0.962 | 0.737 | 0.596 | 0.0 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 1298 bits (3360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/785 (81%), Positives = 704/785 (89%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVELE 785
EV E
Sbjct: 781 EVAKE 785
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1253 bits (3243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/786 (78%), Positives = 700/786 (89%), Gaps = 5/786 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVKAK++SEE L++WR LCG VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+YTVPE+V A+GF+IC DELGSIVE HD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+G+A KL S TDG+ST L++R+E++GINKF ES RGFWV+VWEAL DMTLMIL
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+EKKKITV
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV VNA
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGVATIIGKI
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+FAIAVTIVVVAVPEGLPLAV
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++V
Sbjct: 419 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAILE GL LG
Sbjct: 479 AN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLG 536
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNG 599
G FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+G
Sbjct: 537 GKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSG 596
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
EVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+GIVGIKD
Sbjct: 597 EVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKD 656
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ EE
Sbjct: 657 PVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 716
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
L +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 717 LLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 776
Query: 780 TEVELE 785
TEV E
Sbjct: 777 TEVAKE 782
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1234 bits (3194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/785 (77%), Positives = 683/785 (87%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL ENF VKAKN+SEEAL+RWRKLCG VKN KRRFRFTANL KR EA+AI+ +N E
Sbjct: 1 MESYLEENFGGVKAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANHE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVAVLVS+AALQFI GL+L SEY VPEEV A+GFQIC DELGSIVEGHD KKL HGG
Sbjct: 61 KLRVAVLVSKAALQFIQGLSLRSEYVVPEEVKAAGFQICADELGSIVEGHDSKKLITHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V GIA+KL+TS DG+ST+E + RR+++YG+NKFTES R FWV+VWEAL D TL+ILA
Sbjct: 121 VTGIADKLATSPADGLSTAEESIKRRQDVYGLNKFTESEVRSFWVFVWEALQDTTLIILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSLVVGIA EGWPKGAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD+EKKKI V
Sbjct: 181 VCAFVSLVVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIQV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+++SIYDLLPGD+VHL +GDQVPADGLF+SGFS+LINESSLTGESEPV VN
Sbjct: 241 QVTRNGFRQRLSIYDLLPGDVVHLAIGDQVPADGLFISGFSLLINESSLTGESEPVVVNE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKML+TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 DNPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TF V+ QGL ++K EG +WSGDDALE+LE FAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFIVLSQGLISKKYHEGLLLSWSGDDALEMLEHFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGNIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+N K S +P + K LL+SIFNNTGGEVVI + K +ILGTPTETA+LEF L LG
Sbjct: 481 NNPKNASDLCSELPETVVKTLLESIFNNTGGEVVIDQDGKYQILGTPTETALLEFALSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
G+F+A+R +KIVK+EPFNS KK+M VV++LP GG R HCKGASEI+LAACDKF++ G
Sbjct: 541 GNFKAKRDETKIVKMEPFNSTKKRMCVVLKLPGGGCRAHCKGASEIVLAACDKFMDETGA 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL++ + LN IE FA+EALRTLCL E+ FS + IP +GYTCIGIVGIKDP
Sbjct: 601 VVPLDKTTADKLNGIIESFANEALRTLCLGYREMEEGFSVEEQIPLQGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVA CRSAGI VRMVTGDNINTAKAIARECGILT++G+AIEGPEFREKS +EL
Sbjct: 661 VRPGVRESVATCRSAGIMVRMVTGDNINTAKAIARECGILTEDGLAIEGPEFREKSLDEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKHTLVKHLRTT EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 721 LKLIPKIQVMARSSPLDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
Query: 781 EVELE 785
EV E
Sbjct: 781 EVAKE 785
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/787 (77%), Positives = 692/787 (87%), Gaps = 6/787 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN NF DVKAK++SEE L++WR LC VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+Y VPEEV A+GF IC DELGSIVEGHD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSE-HLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
V+G++ KL G+ST E L++R+E++GINKF ES R FWV+VWEAL DMTLMIL
Sbjct: 119 VDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMIL 178
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+EKKKIT
Sbjct: 179 GVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKIT 238
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
VQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV V
Sbjct: 239 VQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVT 298
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK
Sbjct: 299 AQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 358
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+FAIAVTIVVVAVPEGLPLA
Sbjct: 359 IGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLA 418
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++
Sbjct: 419 VTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQD 478
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V + + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAILE GL L
Sbjct: 479 V--ASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSL 536
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSN 598
GG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+
Sbjct: 537 GGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSS 596
Query: 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658
GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCIGIVGIK
Sbjct: 597 GEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIK 656
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
DP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ E
Sbjct: 657 DPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQE 716
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
E+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIA
Sbjct: 717 EMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIA 776
Query: 779 GTEVELE 785
GTEV E
Sbjct: 777 GTEVAKE 783
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/731 (70%), Positives = 602/731 (82%), Gaps = 1/731 (0%)
Query: 55 RRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKK 114
R S+ EK +VA L S+A L+F HG++L S Y VPE+V A+GFQI DEL SIVE D KK
Sbjct: 60 RASHHEKLQVAALPSKATLEFEHGVSLRSAYIVPEDVQAAGFQIDADELASIVESRDTKK 119
Query: 115 LKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDM 174
L VHG + GIA+KL TS+T+GI T + LLN+R++IYG+NKF E+ R FW +VWEAL D
Sbjct: 120 LTVHGQLNGIADKLGTSLTNGIVTDKDLLNQRQDIYGVNKFAETEIRSFWEFVWEALEDT 179
Query: 175 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 234
TL+IL+ CA+ SLVVGI TEGWP+GAHDG+GIV SILLVV VT TS+Y+QSLQF+DLD+E
Sbjct: 180 TLIILSACAIFSLVVGITTEGWPQGAHDGVGIVASILLVVSVTGTSNYQQSLQFRDLDKE 239
Query: 235 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294
K+KI VQV RNG R+++ I DLLPGD VHL +GDQVPADGLF+SGFSVL++ESSLTGESE
Sbjct: 240 KRKILVQVTRNGLRQRVLIDDLLPGDAVHLAVGDQVPADGLFISGFSVLVDESSLTGESE 299
Query: 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
PV VN NP+LLSGTKV +GSCKMLVT VGMRTQWGKLMA L++GGDDETPLQ +LNGVA
Sbjct: 300 PVFVNEDNPYLLSGTKVLDGSCKMLVTAVGMRTQWGKLMAVLTDGGDDETPLQTRLNGVA 359
Query: 355 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 414
IGKIGLFFAV+TF V+ QG+ +K +G +WSGDD LEIL+ FA+AVTIVVVAVPE
Sbjct: 360 NTIGKIGLFFAVLTFIVLSQGIIGQKYLDGLLLSWSGDDVLEILDHFAVAVTIVVVAVPE 419
Query: 415 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 474
GLPLAVTLSLAFAMKKMMNDKALVR LAACETMGSAT ICSDKTGTLTTN MTV+KACIC
Sbjct: 420 GLPLAVTLSLAFAMKKMMNDKALVRQLAACETMGSATVICSDKTGTLTTNRMTVVKACIC 479
Query: 475 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534
+V+N + TP S+ P A + LL+SIFNNT GEVV + K +ILGTPTETA+LE
Sbjct: 480 GNTIQVNNPQ-TPNMSSNFPEVAVETLLESIFNNTSGEVVTNQDGKYQILGTPTETALLE 538
Query: 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 594
F LLL GD + ++ SKIVKVEPFNS KK+M ++ELP GG+R HCKGASEI+LAACDKF
Sbjct: 539 FALLLDGDCKEKQLGSKIVKVEPFNSTKKRMSTILELPGGGYRAHCKGASEIVLAACDKF 598
Query: 595 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 654
++ G +VPL++ + LN+ I+ F+SEALRTLCLA E+ FS IP +GYTCIGI
Sbjct: 599 IDERGCIVPLDDKTSSKLNDIIKAFSSEALRTLCLAYREMEEGFSTQEQIPLQGYTCIGI 658
Query: 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 714
VGIKDP+RPGV++SVA CRSAGI+VRM+TGDNI+TAKAIARECGILT +GIAIEG EFRE
Sbjct: 659 VGIKDPVRPGVRQSVATCRSAGISVRMITGDNIDTAKAIARECGILTKDGIAIEGAEFRE 718
Query: 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
KS EEL LIPK+QV+ARSSP+DKHTLVKHLRT EVVAVTGDGTNDAPAL EADIGLA
Sbjct: 719 KSAEELHDLIPKMQVLARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLA 778
Query: 775 MGIAGTEVELE 785
MGIAGTEV E
Sbjct: 779 MGIAGTEVAKE 789
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/788 (62%), Positives = 595/788 (75%), Gaps = 5/788 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQ 59
++ YL ENF DV AKN SEEA +RWR+ G VKNR+RRFR+ +L +R +A RS Q
Sbjct: 4 LDRYLQENF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQ 62
Query: 60 EKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG 119
EK RVA+ V QAAL F G EY + ++ +G+ I PDEL I HD K LK+HG
Sbjct: 63 EKIRVALYVQQAALIFSDGAK-KKEYKLTGDIIKAGYAINPDELALITSKHDSKALKMHG 121
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
GV+GI+ K+ +S GI SE L+ R+ IYG+N++ E P+R FW++VW+AL DMTL+IL
Sbjct: 122 GVDGISIKVRSSFDHGIYASE--LDTRQNIYGVNRYAEKPSRSFWMFVWDALQDMTLIIL 179
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD EKKKI
Sbjct: 180 MVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIF 239
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
+ V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES+PV V+
Sbjct: 240 IHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVS 299
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGVATIIGK
Sbjct: 300 QDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATIIGK 359
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVPEGLPLA
Sbjct: 360 IGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLA 419
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTNHM V K I E K
Sbjct: 420 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKS 479
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V ++ + S + +S LLLQ IF NT EVV + K +LGTPTE AILEFGL L
Sbjct: 480 VTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 539
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GD AE +A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD ++ +G
Sbjct: 540 KGDHDAEYRACTKVKVEPFNSVKKKMAVLISLPNGTSRWFCKGASEIILQMCDMMVDGDG 599
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
+PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I I GIKD
Sbjct: 600 NAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKD 659
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF KS EE
Sbjct: 660 PVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSTEE 719
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ LI IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 720 MRDLILNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 779
Query: 780 TEVELECC 787
TEV E
Sbjct: 780 TEVAKESA 787
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/785 (61%), Positives = 595/785 (75%), Gaps = 12/785 (1%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + +V +KN S EA QRWR G VKNR RRFR +NL K E E R QE
Sbjct: 1 MSNLLKD--FEVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RV V +AA QFI EY + +EV +GF + DEL S+V HD K L GG
Sbjct: 59 KIRVVFYVQKAAFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EGIA+K+S S+ +G+ +SE L+ R++IYG N++TE PAR F +VWEAL D+TL+IL
Sbjct: 118 PEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDREKKKI +
Sbjct: 176 VCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIII 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++FAIAVTI+VVAVPEGLPLAV
Sbjct: 356 GLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K ICE IKE
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKE- 474
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AILEFGLLLG
Sbjct: 475 ---RQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLG 531
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K ++SNGE
Sbjct: 532 GDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGE 591
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VPL+E + +++ IE FASEALRTLCL ++ D +P GYT + +VGIKDP
Sbjct: 592 SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVAVVGIKDP 649
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR E+
Sbjct: 650 VRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEM 709
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 710 RAILPKIQVMARSLPLDKHTLVNNLR-KMGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 768
Query: 781 EVELE 785
EV E
Sbjct: 769 EVAKE 773
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/786 (61%), Positives = 603/786 (76%), Gaps = 11/786 (1%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + +V+AKN S EA QRWR VKNR RRFR +L K + E + QE
Sbjct: 1 MSNLLRD--FEVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVA V +AAL FI EY + +EV +GF I DEL S+V +D K L GG
Sbjct: 59 KIRVAFFVQKAALHFIDAAA-RPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VE +A+K+S S+++GI +SE + R++I+G N++TE PAR F ++VWEALHD+TL+IL
Sbjct: 118 VEELAKKVSVSLSEGIRSSE--VPIREKIFGENRYTEKPARSFLMFVWEALHDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDREKKKI V
Sbjct: 176 VCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIV 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++FAI+VTI+VVAVPEGLPLAV
Sbjct: 356 GLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE- 479
TLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K IC++++E
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
+ SK + S ++ LLQ IF NTG EVV + T+ILG+PTE AILEFGLLL
Sbjct: 476 QEGSKESFELELSEEVQST--LLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLL 533
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+ ++SNG
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
E VPL E + +++ IE FASEALRTLCL ++ S + +P GYT + +VGIKD
Sbjct: 594 ESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMVAVVGIKD 651
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EFR+ S E
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHE 711
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 712 MRAIIPKIQVMARSLPLDKHTLVSNLR-KIGEVVAVTGDGTNDAPALHEADIGLAMGIAG 770
Query: 780 TEVELE 785
TEV E
Sbjct: 771 TEVAKE 776
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/786 (61%), Positives = 582/786 (74%), Gaps = 27/786 (3%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQ 59
++ YL E+F DV AKN SEEA +RWR+ G VKNR+RRFR+ +L +R +A RS Q
Sbjct: 4 LDRYLQEHF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQ 62
Query: 60 EKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG 119
EK RVA+ V QAAL F DEL I HD K LK+HG
Sbjct: 63 EKIRVALYVQQAALIF-----------------------SDDELALITSKHDSKALKMHG 99
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
GV+GI++K+ +S GI S+ L+ R+ IYG+N++ E P+R FW++VW+A DMTL+IL
Sbjct: 100 GVDGISKKVRSSFDHGICASD--LDTRQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIIL 157
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD EKKKI
Sbjct: 158 MVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIF 217
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
+ V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES+PV V+
Sbjct: 218 IHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVS 277
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGVAT+IGK
Sbjct: 278 QDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGK 337
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVPEGLPLA
Sbjct: 338 IGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLA 397
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTN+M V K I E K
Sbjct: 398 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKS 457
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V ++ + S + + LLLQ IF NT EVV + K +LGTPTE AILEFGL L
Sbjct: 458 VTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 517
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
G AE A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD ++ +G
Sbjct: 518 EGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSGTSRWFCKGASEIILQMCDMMVDGDG 577
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
+PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I I GIKD
Sbjct: 578 NAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKD 637
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF KS EE
Sbjct: 638 PVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSPEE 697
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ LIP IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 698 MRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 757
Query: 780 TEVELE 785
TEV E
Sbjct: 758 TEVAKE 763
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/779 (59%), Positives = 579/779 (74%), Gaps = 10/779 (1%)
Query: 11 DVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVS 69
+V AKN SEEA +RWR G VKNR+RRFR +L KR +AE RR QEK RVA+ V
Sbjct: 16 EVPAKNPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQEKLRVALFVQ 75
Query: 70 QAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLS 129
+AALQFI + +E+ +PE GF + +EL SIV GHD K L+ H GV+GIA K++
Sbjct: 76 KAALQFIDAVR-KTEHPLPELARQCGFSVSAEELASIVRGHDTKSLRFHNGVDGIARKVA 134
Query: 130 TSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVV 189
S+ DG+ + + L R E+YG N++TE P R FW+++W+A DMTL++LA CA VS+ +
Sbjct: 135 VSLADGVKSDDAGL--RAEVYGANQYTEKPPRTFWMFLWDASQDMTLLLLAFCAAVSVAI 192
Query: 190 GIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 249
G+ATEGWP G +DG+GI+++ILLVV +TA SDYKQSLQF+DLD+EKKKI VQV R+G+R+
Sbjct: 193 GLATEGWPSGMYDGVGIMLTILLVVMITAASDYKQSLQFRDLDKEKKKIDVQVTRDGYRQ 252
Query: 250 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGT 309
K+SIYD++ GDIVHL +GDQVPADGLF+ G+S +++ES+L+GESEPV+V+ N FLL GT
Sbjct: 253 KVSIYDIVVGDIVHLSIGDQVPADGLFIDGYSFVVDESNLSGESEPVHVSTANRFLLGGT 312
Query: 310 KVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTF 369
KVQ+GS +MLVT VGMRT+WG LM TLS+GG+DETPLQVKLNGVATIIGKIGL FAV+TF
Sbjct: 313 KVQDGSARMLVTAVGMRTEWGNLMETLSQGGEDETPLQVKLNGVATIIGKIGLAFAVLTF 372
Query: 370 AV-MVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428
V M + L + G W DAL +L FFA+AVTI+VVAVPEGLPLAVTLSLAFAM
Sbjct: 373 TVLMARFLLGKAGAPGGLLRWRMVDALAVLNFFAVAVTIIVVAVPEGLPLAVTLSLAFAM 432
Query: 429 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488
KK+M ++ALVRHL+ACETMGSA+ IC+DKTGTLTTNHM V K + + N+KG
Sbjct: 433 KKLMQERALVRHLSACETMGSASCICTDKTGTLTTNHMVVEKIWASGAAQTMSNAKGFDQ 492
Query: 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQ 548
SS+ + +K+LL+ +F+ +G EVV G+ + I+GTPTETAILEFGL + + E
Sbjct: 493 LTSSMSETFAKVLLEGVFHCSGSEVVRGKDGRHTIMGTPTETAILEFGLAVEKRARIEHT 552
Query: 549 ASKIVKVEPFNSVKKQMGVVIELPEGGF--RVHCKGASEIILAACDKFLNSNGEVVPLNE 606
+ +KVEPFNSVKK M VVI P G R KGASE++L+ C L+ G V L +
Sbjct: 553 GAGKLKVEPFNSVKKTMAVVIASPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLTD 612
Query: 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVK 666
A + I+ FA EALRTLCLA ++ EGYT I + GIKDP+RPGV+
Sbjct: 613 AKAKRVASAIDAFACEALRTLCLAYQDVDGGGGDIP---GEGYTLIAVFGIKDPLRPGVR 669
Query: 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726
E+VA C +AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGPEFR K +++ ++IPK
Sbjct: 670 EAVATCHAAGINVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFRNKDPDQMREIIPK 729
Query: 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELE 785
IQVMARS P+DKHTLV +LR EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV E
Sbjct: 730 IQVMARSLPLDKHTLVTNLRGMFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE 788
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 799 | ||||||
| 289540885 | 1019 | calcium ATPase [Trifolium repens] | 0.981 | 0.769 | 0.836 | 0.0 | |
| 224127276 | 1020 | predicted protein [Populus trichocarpa] | 0.982 | 0.769 | 0.843 | 0.0 | |
| 351720666 | 1019 | plasma membrane Ca2+-ATPase [Glycine max | 0.981 | 0.769 | 0.830 | 0.0 | |
| 297851218 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.982 | 0.769 | 0.817 | 0.0 | |
| 225458828 | 1018 | PREDICTED: calcium-transporting ATPase 1 | 0.979 | 0.769 | 0.838 | 0.0 | |
| 30690083 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.982 | 0.769 | 0.810 | 0.0 | |
| 356510560 | 1019 | PREDICTED: calcium-transporting ATPase 1 | 0.981 | 0.769 | 0.828 | 0.0 | |
| 516118 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.982 | 0.769 | 0.810 | 0.0 | |
| 509810 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.982 | 0.769 | 0.808 | 0.0 | |
| 225438996 | 1019 | PREDICTED: calcium-transporting ATPase 2 | 0.981 | 0.769 | 0.810 | 0.0 |
| >gi|289540885|gb|ADD09562.1| calcium ATPase [Trifolium repens] | Back alignment and taxonomy information |
|---|
Score = 1340 bits (3469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/785 (83%), Positives = 719/785 (91%), Gaps = 1/785 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN+NF DVK KN+SEEALQRWRKLC VKNRKRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MESYLNDNFGDVKPKNSSEEALQRWRKLCWVVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGL LSSEY VPEEV A+GF+IC DE GSIV+G D+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGLRLSSEYKVPEEVKAAGFEICADEAGSIVDGRDVKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+EGI +KLS+S+ DGISTSE LLNRRKEIYGINKFTESPARGFWV+VWEAL D TLMILA
Sbjct: 121 IEGITDKLSSSVNDGISTSESLLNRRKEIYGINKFTESPARGFWVFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL VGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCAFVSLAVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNG+R+KISIYDLLPGDIVHL +GDQVPADGLF+SGFSV INESSLTGESEPVNV+
Sbjct: 241 QVTRNGYRQKISIYDLLPGDIVHLNIGDQVPADGLFLSGFSVCINESSLTGESEPVNVSD 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKLQEG+ WTWSGDDA+E++EFFAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLQEGSQWTWSGDDAMELVEFFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
NS T F +P SA +LL+SIFNNTGGEVV E K EILG+PTETAILEFGL LG
Sbjct: 481 KNSTDTSDFSFDVPDSAIAILLESIFNNTGGEVVKNENGKIEILGSPTETAILEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GG+R HCKGASEIILAACDKF++ NGE
Sbjct: 541 GDFHKERQVSKLVKVEPFNSIKKRMGVVLQLPDGGYRAHCKGASEIILAACDKFVDKNGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E ++ HLN+TIEKFA+EALRTLCLA ++I +EF +PIP +GYTCIGIVGIKDP
Sbjct: 601 VVPLDEDSIRHLNDTIEKFANEALRTLCLAYVDIHDEFLVGSPIPIDGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICR+AGITVRMVTGDNINTAKAIARECGILTD GIAIEGPEFRE S+E+L
Sbjct: 661 VRPGVRESVAICRAAGITVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREMSEEKL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVK LRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKQLRTTFEEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVELE 785
EV E
Sbjct: 780 EVAKE 784
|
Source: Trifolium repens Species: Trifolium repens Genus: Trifolium Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127276|ref|XP_002320033.1| predicted protein [Populus trichocarpa] gi|222860806|gb|EEE98348.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1323 bits (3424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/785 (84%), Positives = 723/785 (92%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
MENYLNENF DVKAKN+S+EALQRWRKLC VKNRKRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MENYLNENFGDVKAKNSSDEALQRWRKLCWLVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVAVLVS+AALQFIH LNLSS+Y VP+EV +GFQIC DELGSIVEGHD+KKLK+HG
Sbjct: 61 KLRVAVLVSKAALQFIHCLNLSSDYVVPKEVEEAGFQICADELGSIVEGHDVKKLKIHGE 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VEGIAEKLSTSI DGISTSE L+N RKEIYGINKFTESP RGF V+VWEAL DMTLMIL
Sbjct: 121 VEGIAEKLSTSINDGISTSEDLVNGRKEIYGINKFTESPPRGFLVFVWEALQDMTLMILG 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSL+VGIA EGWPKG+HDGLGIV SILLVVFVTATSDYKQSLQFKDLDREKKKITV
Sbjct: 181 VCALVSLIVGIAMEGWPKGSHDGLGIVASILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+KISIYDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESEPVNVNA
Sbjct: 241 QVTRNAVRQKISIYDLLPGDIVHLFIGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 ANPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTFAV+VQGL RKL+EGTHW WSGDDA E+LEFFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFAVLVQGLCNRKLREGTHWIWSGDDAREMLEFFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGS+T+ICSDKTGTLTTNHMTV+KAC+ E +EV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSSTTICSDKTGTLTTNHMTVVKACVSGETREV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+S+ T +FGS+IP A +LL+SIFNNTGGEVV+ E K +ILGTPTETA+LEFGLLLG
Sbjct: 481 GSSESTTSFGSAIPDLAKSVLLESIFNNTGGEVVVNEERKVQILGTPTETALLEFGLLLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD + +++ SKIVKVEPFNS KK+MGVVIELP GGFR HCKGASEI+LAACDK ++SNG
Sbjct: 541 GDSRQKQEKSKIVKVEPFNSTKKRMGVVIELPNGGFRAHCKGASEIVLAACDKVIDSNGV 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+EA++NHLN+TIE+FASE+LRTLCLA +EIGNE+S ++PIP++GYTCI IVGIKDP
Sbjct: 601 VVPLDEASINHLNDTIERFASESLRTLCLAYLEIGNEYSDESPIPSKGYTCIAIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGI VRMVTGDN+ TAKAIARECGILTD+GIAIEGP FREKS+EEL
Sbjct: 661 VRPGVKESVAICRSAGIVVRMVTGDNLTTAKAIARECGILTDDGIAIEGPAFREKSEEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+LIPKIQVMARSSP+DKH LV+HLRTT EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 721 QELIPKIQVMARSSPLDKHALVRHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
Query: 781 EVELE 785
EV E
Sbjct: 781 EVAKE 785
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720666|ref|NP_001237184.1| plasma membrane Ca2+-ATPase [Glycine max] gi|11066056|gb|AAG28436.1|AF195029_1 plasma membrane Ca2+-ATPase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1316 bits (3407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/785 (83%), Positives = 710/785 (90%), Gaps = 1/785 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME YL+ENF DVK KN+SEEALQRWRK C VKN KRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MEIYLSENFGDVKPKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAA+QFIHGLNLSSEYTVPEEV A+GF+IC DELGSIVEG D KKLK HGG
Sbjct: 61 KFRVAVLVSQAAIQFIHGLNLSSEYTVPEEVKAAGFEICADELGSIVEGRDSKKLKSHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+ I KL+TS+ DGISTSEHL+N+RKEIYG+NKF ESPARGFWVYVWE+L D TLMILA
Sbjct: 121 VDAITNKLNTSVDDGISTSEHLVNQRKEIYGVNKFAESPARGFWVYVWESLQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+K+S+YDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESEPVNV+
Sbjct: 241 QVTRNSCRQKLSMYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVSE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKL+EG+ W WSGDDA++I+EFFAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLREGSQWMWSGDDAMQIVEFFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KA IC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKAYICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ SK F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LEFGL LG
Sbjct: 481 NGSKVYSDFSSDIHDSALAILLESIFNNTGGEVVKNKDEKIEILGSPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GGFR HCKGASEIILA+CDK ++S+GE
Sbjct: 541 GDFHKERQRSKLVKVEPFNSIKKRMGVVLQLPDGGFRAHCKGASEIILASCDKVVDSSGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VV LNE ++NHLN IE FA EALRTLCLA ++I +EFS IPT GYTCIGIVGIKDP
Sbjct: 601 VVALNEDSINHLNNMIETFAGEALRTLCLAYLDIHDEFSVGTAIPTRGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFREKS+EEL
Sbjct: 661 VRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREKSEEEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVELE 785
EV E
Sbjct: 780 EVAKE 784
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297851218|ref|XP_002893490.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] gi|297339332|gb|EFH69749.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1307 bits (3383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/785 (81%), Positives = 704/785 (89%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEY VPEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYIVPEEVRQAGFEICPDELGSIVEGHDVKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGINKFTESP RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINKFTESPTRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDYKQSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYKQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+GD+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDASHWIWTGDELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ S F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NVSDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPEG FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPEGHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNE + HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLNEESTGHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVELE 785
EV E
Sbjct: 781 EVAKE 785
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458828|ref|XP_002285297.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1302 bits (3370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/785 (83%), Positives = 725/785 (92%), Gaps = 2/785 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN+NF VK KN+SEEALQRWRKLC VKN KRRFRFTANLSKRFEA+AIRRSNQE
Sbjct: 1 MESYLNDNFGGVKPKNSSEEALQRWRKLCWVVKNPKRRFRFTANLSKRFEAQAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGL SS+Y PEEV A+GFQIC DELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGL--SSDYVAPEEVTAAGFQICADELGSIVEGHDLKKLKIHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+GIAEKLSTS T+GI ++ LLN+RKEIYGINKFTE+ GFWV+VWEALHDMTLMILA
Sbjct: 119 VQGIAEKLSTSTTNGIPMADDLLNKRKEIYGINKFTETKVPGFWVFVWEALHDMTLMILA 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGI EGWPKGAHDGLGIV SILLVVFVTA SDY+QSLQFKDLD EKKKITV
Sbjct: 179 VCAFVSLLVGIIMEGWPKGAHDGLGIVASILLVVFVTAISDYRQSLQFKDLDTEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+KISIYDL+PGDIVHL +GDQVPADGLFV GFS+LINESSLTGESEPV+VN+
Sbjct: 239 QVTRDGQRQKISIYDLVPGDIVHLSIGDQVPADGLFVLGFSLLINESSLTGESEPVHVNS 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK+
Sbjct: 299 ENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKL 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFA VTFAV+VQGLF+RKL+EG+HW+WSGDDALE+LEFFA+AVTIVVVAVPEGLPLAV
Sbjct: 359 GLFFAAVTFAVLVQGLFSRKLREGSHWSWSGDDALEMLEFFAVAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMM+DKALVRHLAACETMGSATSICSDKTGTLTTNHMTV+K CIC +IKEV
Sbjct: 419 TLSLAFAMKKMMHDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKVCICGKIKEV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+S+ T +F S IP A ++LLQSIFNNTGGE+V + NKTEILGTPTE A+LEFGLLLG
Sbjct: 479 SSSEETSSFCSGIPDFAVRILLQSIFNNTGGEIVTNKDNKTEILGTPTEAALLEFGLLLG 538
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQAERQASK+VKVEPFNS KK+MGVV+E+PEGGFR H KGASEI+LA+CDK ++SNG+
Sbjct: 539 GDFQAERQASKLVKVEPFNSAKKRMGVVLEIPEGGFRAHSKGASEIVLASCDKVIDSNGD 598
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNEA+ NHL +TIE+FASEALRTLCLA ME+G+EFSA++P+P++GYTCIGIVGIKDP
Sbjct: 599 VVPLNEASFNHLKDTIERFASEALRTLCLAYMELGSEFSAESPLPSKGYTCIGIVGIKDP 658
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGI+VRMVTGDNINTAKAIARECGILTD GIAIEGP FREKS+EEL
Sbjct: 659 VRPGVKESVAICRSAGISVRMVTGDNINTAKAIARECGILTDEGIAIEGPVFREKSEEEL 718
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKH LVKHLRT L EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 719 QKLIPKIQVMARSSPLDKHILVKHLRTALEEVVAVTGDGTNDAPALHEADIGLAMGIAGT 778
Query: 781 EVELE 785
EV E
Sbjct: 779 EVAKE 783
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30690083|ref|NP_849716.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] gi|30316378|sp|Q37145.3|ACA1_ARATH RecName: Full=Calcium-transporting ATPase 1, chloroplastic; AltName: Full=Ca(2+)-ATPase isoform 1; AltName: Full=Plastid envelope ATPase 1; Flags: Precursor gi|12320888|gb|AAG50579.1|AC079280_10 envelope Ca2+-ATPase [Arabidopsis thaliana] gi|332192757|gb|AEE30878.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1298 bits (3360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/785 (81%), Positives = 704/785 (89%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVELE 785
EV E
Sbjct: 781 EVAKE 785
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510560|ref|XP_003524005.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1298 bits (3358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/785 (82%), Positives = 709/785 (90%), Gaps = 1/785 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL+ENF DVK KN+SEEALQRWRK C VKN KRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MESYLSENFGDVKPKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGLNLS+EYTVPEEV +GF+IC DELGSIVEG D+KKLK HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGLNLSTEYTVPEEVKTAGFEICADELGSIVEGRDLKKLKSHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+ I KL+TS+ DGISTS+HLLN+RKEIYG+NKF ESPARGFWV+VWEAL D TLMILA
Sbjct: 121 VDAITSKLNTSVDDGISTSQHLLNQRKEIYGVNKFAESPARGFWVFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+K+SIYDLLPGDIVHL +GDQVPADG FVSGFSVLINESSLTGESEPVNV+
Sbjct: 241 QVTRNSCRQKLSIYDLLPGDIVHLNIGDQVPADGFFVSGFSVLINESSLTGESEPVNVSE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKL+EG+ WTWSGDDA++I+EFFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLREGSQWTWSGDDAMQIVEFFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K CIC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKVCICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ SK + F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LE GL LG
Sbjct: 481 NGSKVSSDFSSDIHDSALAVLLESIFNNTGGEVVKNKDEKIEILGSPTETALLELGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS KK+MGVV++LP+GGFR HCKGASEIILAACDK ++S+GE
Sbjct: 541 GDFLKERQRSKLVKVEPFNSTKKRMGVVLQLPDGGFRAHCKGASEIILAACDKVVDSSGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNE ++NHLN IE FA EALRTLCLA ++I +EFS PIPT GYT I IVGIKDP
Sbjct: 601 VVPLNEDSINHLNNMIETFAGEALRTLCLAYLDIDDEFSVGTPIPTRGYTFIAIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFREKS+ EL
Sbjct: 661 VRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREKSEVEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVELE 785
EV E
Sbjct: 780 EVAKE 784
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|516118|gb|AAD10212.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1298 bits (3358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/785 (81%), Positives = 704/785 (89%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVELE 785
EV E
Sbjct: 781 EVAKE 785
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|509810|gb|AAD10211.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/785 (80%), Positives = 703/785 (89%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+ EEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLSEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVELE 785
EV E
Sbjct: 781 EVAKE 785
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438996|ref|XP_002284429.1| PREDICTED: calcium-transporting ATPase 2, plasma membrane-type isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1294 bits (3349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/785 (81%), Positives = 704/785 (89%), Gaps = 1/785 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL+ENFS VK K++S+E LQRWR LC VKN KRRFRFTANLSKR EA A+RR+NQE
Sbjct: 1 MESYLDENFSGVKPKHSSDEVLQRWRNLCSVVKNPKRRFRFTANLSKRGEAAAMRRTNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AALQFI G+ +S +Y VPEE+ A+GFQIC DELGSIVEGHD+KKLK+HGG
Sbjct: 61 KLRIAVLVSKAALQFIQGVPVS-DYVVPEEIKAAGFQICADELGSIVEGHDVKKLKIHGG 119
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+GIAEKLSTS T G++ LLN R+EIYGINKFTE+ ARGF V+VWEALHDMTL+ILA
Sbjct: 120 VDGIAEKLSTSTTYGLTADNKLLNHRQEIYGINKFTETQARGFLVFVWEALHDMTLIILA 179
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSL+VGIA EGWP GAHDGLGIV SILLVV VTATSDY+QSLQF+DLD+EKKKI++
Sbjct: 180 VCALVSLIVGIAMEGWPVGAHDGLGIVASILLVVLVTATSDYRQSLQFRDLDKEKKKISI 239
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNG+R K+SIYDLLPGDIVHL +GDQVPADGLFVSGF V I+ESSLTGESEPV V+A
Sbjct: 240 QVTRNGYRHKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFCVSIDESSLTGESEPVMVSA 299
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKM++TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVAT IGKI
Sbjct: 300 ENPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATFIGKI 359
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAVVTFAV+VQGLF RKL EGTHW+WSGDDALE+LEFFAIAVTIVVVAVPEGLPLAV
Sbjct: 360 GLVFAVVTFAVLVQGLFNRKLGEGTHWSWSGDDALEMLEFFAIAVTIVVVAVPEGLPLAV 419
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT ICSDKTGTLTTNHMTV+K+CIC +K+V
Sbjct: 420 TLSLAFAMKKMMNDKALVRHLAACETMGSATCICSDKTGTLTTNHMTVVKSCICMNVKDV 479
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
D +F S IP S KLLLQSIFNN+GGEVVI + K EILG+PT+ A+LEFGL LG
Sbjct: 480 DRQSNASSFCSEIPDSTVKLLLQSIFNNSGGEVVINKEGKLEILGSPTDAALLEFGLFLG 539
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ ERQA K++KVEPFNS KK+MGVV+ELPEGG R H KGASEIILAACDK ++SNGE
Sbjct: 540 GDFQGERQAPKLIKVEPFNSTKKRMGVVLELPEGGLRAHTKGASEIILAACDKMIDSNGE 599
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+EA+++HL TI +FASEALRTLCLA ME+ N FS + PIP GYTCIGIVGIKDP
Sbjct: 600 VVPLDEASIDHLKATINQFASEALRTLCLAYMELENGFSPNDPIPLSGYTCIGIVGIKDP 659
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP+FREKS+EEL
Sbjct: 660 VRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKSEEEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKHTLVKHLRTT GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 FKLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVELE 785
EV E
Sbjct: 780 EVAKE 784
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 799 | ||||||
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.982 | 0.769 | 0.797 | 0.0 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.977 | 0.770 | 0.773 | 0.0 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.977 | 0.769 | 0.764 | 0.0 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.969 | 0.752 | 0.609 | 3.4e-244 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.967 | 0.754 | 0.606 | 3e-243 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.947 | 0.704 | 0.458 | 2e-166 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.961 | 0.718 | 0.448 | 3e-165 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.958 | 0.705 | 0.446 | 2.3e-158 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.563 | 0.417 | 0.384 | 4.9e-142 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.917 | 0.709 | 0.407 | 7.8e-142 |
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3231 (1142.4 bits), Expect = 0., P = 0.
Identities = 626/785 (79%), Positives = 693/785 (88%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+F PEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVELE 785
EV E
Sbjct: 781 EVAKE 785
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3135 (1108.6 bits), Expect = 0., P = 0.
Identities = 608/786 (77%), Positives = 689/786 (87%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVKAK++SEE L++WR LCG VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+YTVPE+V A+GF+IC DELGSIVE HD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+G+A KL S TDG+ST L++R+E++GINKF ES RGFWV+VWEAL DMTLMIL
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+EKKKITV
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV VNA
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGVATIIGKI
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+F PEGLPLAV
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++V
Sbjct: 419 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAILE GL LG
Sbjct: 479 AN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLG 536
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNG 599
G FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+G
Sbjct: 537 GKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSG 596
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
EVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+GIVGIKD
Sbjct: 597 EVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKD 656
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ EE
Sbjct: 657 PVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 716
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
L +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 717 LLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 776
Query: 780 TEVELE 785
TEV E
Sbjct: 777 TEVAKE 782
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3074 (1087.2 bits), Expect = 0., P = 0.
Identities = 602/787 (76%), Positives = 682/787 (86%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN NF DVKAK++SEE L++WR LC VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+Y VPEEV A+GF IC DELGSIVEGHD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSE-HLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
V+G++ KL G+ST E L++R+E++GINKF ES R FWV+VWEAL DMTLMIL
Sbjct: 119 VDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMIL 178
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+EKKKIT
Sbjct: 179 GVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKIT 238
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
VQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV V
Sbjct: 239 VQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVT 298
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK
Sbjct: 299 AQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 358
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLA 419
IGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+F PEGLPLA
Sbjct: 359 IGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLA 418
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++
Sbjct: 419 VTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQD 478
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V SK + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAILE GL L
Sbjct: 479 VA-SKSS-SLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSL 536
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSN 598
GG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+
Sbjct: 537 GGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSS 596
Query: 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658
GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCIGIVGIK
Sbjct: 597 GEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIK 656
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
DP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ E
Sbjct: 657 DPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQE 716
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
E+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIA
Sbjct: 717 EMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIA 776
Query: 779 GTEVELE 785
GTEV E
Sbjct: 777 GTEVAKE 783
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2353 (833.4 bits), Expect = 3.4e-244, P = 3.4e-244
Identities = 479/786 (60%), Positives = 592/786 (75%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + F +V+AKN S EA QRWR VKNR RRFR +L K + E + QE
Sbjct: 1 MSNLLRD-F-EVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVA V +AAL FI EY + +EV +GF I DEL S+V +D K L GG
Sbjct: 59 KIRVAFFVQKAALHFIDAA-ARPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VE +A+K+S S+++GI +SE + R++I+G N++TE PAR F ++VWEALHD+TL+IL
Sbjct: 118 VEELAKKVSVSLSEGIRSSEVPI--REKIFGENRYTEKPARSFLMFVWEALHDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDREKKKI V
Sbjct: 176 VCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIV 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++F PEGLPLAV
Sbjct: 356 GLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE- 479
TLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K IC++++E
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
+ SK +F + LLQ IF NTG EVV + T+ILG+PTE AILEFGLLL
Sbjct: 476 QEGSK--ESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLL 533
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+ ++SNG
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
E VPL E + +++ IE FASEALRTLCL ++ S + +P GYT + +VGIKD
Sbjct: 594 ESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMVAVVGIKD 651
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EFR+ S E
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHE 711
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 712 MRAIIPKIQVMARSLPLDKHTLVSNLRK-IGEVVAVTGDGTNDAPALHEADIGLAMGIAG 770
Query: 780 TEVELE 785
TEV E
Sbjct: 771 TEVAKE 776
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2344 (830.2 bits), Expect = 3.0e-243, P = 3.0e-243
Identities = 476/785 (60%), Positives = 584/785 (74%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + F +V +KN S EA QRWR G VKNR RRFR +NL K E E R QE
Sbjct: 1 MSNLLKD-F-EVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RV V +AA QFI EY + +EV +GF + DEL S+V HD K L GG
Sbjct: 59 KIRVVFYVQKAAFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EGIA+K+S S+ +G+ +SE L+ R++IYG N++TE PAR F +VWEAL D+TL+IL
Sbjct: 118 PEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDREKKKI +
Sbjct: 176 VCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIII 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++F PEGLPLAV
Sbjct: 356 GLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K ICE IKE
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKER 475
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AILEFGLLLG
Sbjct: 476 QEEN----FQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLG 531
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K ++SNGE
Sbjct: 532 GDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGE 591
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VPL+E + +++ IE FASEALRTLCL ++ D +P GYT + +VGIKDP
Sbjct: 592 SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVAVVGIKDP 649
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR E+
Sbjct: 650 VRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEM 709
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 710 RAILPKIQVMARSLPLDKHTLVNNLRK-MGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 768
Query: 781 EVELE 785
EV E
Sbjct: 769 EVAKE 773
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1619 (575.0 bits), Expect = 2.0e-166, P = 2.0e-166
Identities = 365/796 (45%), Positives = 497/796 (62%)
Query: 12 VKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQA 71
+ +KN S E LQ+WRK V N RRFR+T +L K E +R +K R A
Sbjct: 34 IPSKNASIERLQQWRK-AALVLNASRRFRYTLDLKKEQETREMR----QKIRSHAHALLA 88
Query: 72 ALQFIH-GLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLST 130
A +F+ G E T A F I P++L + + H+ L+ +GG +G+A L T
Sbjct: 89 ANRFMDMGRESGVEKTTGPATPAGDFGITPEQLVIMSKDHNSGALEQYGGTQGLANLLKT 148
Query: 131 SITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190
+ GIS + L +RK IYG N + +GF ++W+A HD+TL+IL V A+ SL +G
Sbjct: 149 NPEKGISGDDDDLLKRKTIYGSNTYPRKKGKGFLRFLWDACHDLTLIILMVAAVASLALG 208
Query: 191 IATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRK 250
I TEG +G +DG I +++LV+ VTA SDYKQSLQF++L+ EK+ I ++V R G R +
Sbjct: 209 IKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQNLNDEKRNIHLEVLRGGRRVE 268
Query: 251 ISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGT 309
ISIYD++ GD++ L +G+QVPADG+ +SG S+ ++ESS+TGES+ VN +A +PFL+SG
Sbjct: 269 ISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALDESSMTGESKIVNKDANKDPFLMSGC 328
Query: 310 KVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTF 369
KV +G+ MLVT VG+ T+WG LMA++SE +ETPLQV+LNGVAT IG IGL A
Sbjct: 329 KVADGNGSMLVTGVGVNTEWGLLMASISEDNGEETPLQVRLNGVATFIGSIGLAVAAAVL 388
Query: 370 AVMVQGLFTRKLQE---GTHW----TWSGDDALEILEFFXXXXXXXXXXXPEGLPLAVTL 422
+++ FT ++ G + T G ++++ PEGLPLAVTL
Sbjct: 389 VILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVAVTIVVVAVPEGLPLAVTL 448
Query: 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDN 482
+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV+++ K+ D
Sbjct: 449 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVESYAGG--KKTDT 506
Query: 483 SKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGG 541
+ +PA+ + L+++ I NT G + + EG E G+PTE AIL +G+ LG
Sbjct: 507 EQ--------LPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVKLGM 558
Query: 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601
+F+ R S I+ PFNS KK+ GV ++ +G VH KGASEI+LA+C +++ +G V
Sbjct: 559 NFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVHVHWKGASEIVLASCRSYIDEDGNV 618
Query: 602 VPLNEAAVNHLNETIEKFASEALRTLCLAC-------MEIGNEFSADAPIPTEGYTCIGI 654
P+ + + I A LR + LA + G E S +P + + I
Sbjct: 619 APMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEELSKWV-LPEDDLILLAI 677
Query: 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-----IAIEG 709
VGIKDP RPGVK+SV +C++AG+ VRMVTGDN+ TA+AIA ECGIL+ + IEG
Sbjct: 678 VGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDADLSEPTLIEG 737
Query: 710 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769
FRE +D E K+ KI VM RSSP DK LV+ LR G VVAVTGDGTNDAPALHEA
Sbjct: 738 KSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQ-GHVVAVTGDGTNDAPALHEA 796
Query: 770 DIGLAMGIAGTEVELE 785
DIGLAMGIAGTEV E
Sbjct: 797 DIGLAMGIAGTEVAKE 812
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1608 (571.1 bits), Expect = 3.0e-165, P = 3.0e-165
Identities = 361/805 (44%), Positives = 505/805 (62%)
Query: 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEA-EAIR--RSNQE 60
Y + F KN E L+RWR+ V N RRFR+T +L + + + +R R++ +
Sbjct: 26 YEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFRYTLDLKREEDKKQMLRKMRAHAQ 84
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
R A L AA + + G+ +S P F I +++ SI +I L+ GG
Sbjct: 85 AIRAAHLFKAAASR-VTGI--ASPLPTP---GGGDFGIGQEQIVSISRDQNIGALQELGG 138
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V G+++ L T++ GI + + +RK +G N + + R FW +VWEA D+TL+IL
Sbjct: 139 VRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWRFVWEASQDLTLIILI 198
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
V A+ SL +GI TEG KG +DG+ I ++LLV+ VTATSDY+QSLQF++L+ EK+ I +
Sbjct: 199 VAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQFQNLNEEKRNIRL 258
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
+V R+G R +ISIYD++ GD++ L +GDQVPADG+ V+G S+ ++ESS+TGES+ V N+
Sbjct: 259 EVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAVDESSMTGESKIVQKNS 318
Query: 301 L-NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
+PFL+SG KV +G+ MLVT VG+ T+WG LMA++SE ETPLQV+LNGVAT IG
Sbjct: 319 TKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPLQVRLNGVATFIGI 378
Query: 360 IGLFFAVVTFAVMVQGLFT--RKLQEGTHWTWSGDDALE-----ILEFFXXXXXXXXXXX 412
+GL A V V+V FT K ++G G E ++E F
Sbjct: 379 VGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVAVTIVVVAV 438
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV++ C
Sbjct: 439 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE-C 497
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 532
++++D+ P S +P++ + +L++ I +NT G V E + ++ G+PTE AI
Sbjct: 498 YAG-LQKMDS----PDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGEIQVSGSPTERAI 552
Query: 533 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 592
L + + LG DF A + S V+ PFNS KK+ GV ++ P+ +H KGA+EI+L +C
Sbjct: 553 LNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSVHIHWKGAAEIVLGSCT 612
Query: 593 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI-GNEFSADAP------IP 645
+++ + V ++E + L + I+ A+ +LR + +A ++ D +P
Sbjct: 613 HYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTDEEQLSRWELP 672
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI 705
+ + IVGIKDP RPGVK SV +C+ AG+ VRMVTGDNI TAKAIA ECGIL +
Sbjct: 673 EDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILASDSD 732
Query: 706 A-----IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760
A IEG FR S+EE ++ +I VM RSSP DK LV+ L+ G VVAVTGDGT
Sbjct: 733 ASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRR-GHVVAVTGDGT 791
Query: 761 NDAPALHEADIGLAMGIAGTEVELE 785
NDAPALHEADIGLAMGI GTEV E
Sbjct: 792 NDAPALHEADIGLAMGIQGTEVAKE 816
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1543 (548.2 bits), Expect = 2.3e-158, P = 2.3e-158
Identities = 358/802 (44%), Positives = 497/802 (61%)
Query: 6 NENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVA 65
++ F KN S E+L+RWR+ V N RRFR+T +L+K + RR R
Sbjct: 42 DDPFDIDNTKNASVESLRRWRQ-AALVLNASRRFRYTLDLNKEEHYDNRRRM----IRAH 96
Query: 66 VLVSQAALQFIHGLNLSSEYTVPEEVAASG-FQICPDELGSIVEGHDIKKLKVHGGVEGI 124
V +AAL F + A++G F I ++L S+ ++ L+ +GGV+G+
Sbjct: 97 AQVIRAALLFKLAGEQQIAFGSSTPAASTGNFDIDLEKLVSMTRNQNMSNLQQYGGVKGV 156
Query: 125 AEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCAL 184
AEKL +++ GI+ E + RK +G N + + + F++++WEA D+TL+IL + A+
Sbjct: 157 AEKLKSNMEQGINEDEKEVIDRKNAFGSNTYPKKKGKNFFMFLWEAWQDLTLIILIIAAV 216
Query: 185 VSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244
SL +GI TEG +G DG I ++LLV+ VTA SDY+QSLQF++L+ EK+ I ++V R
Sbjct: 217 TSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNDEKRNIQLEVMR 276
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304
G KISIYD++ GD++ L +GDQVPADG+ +SG S+ I+ESS+TGES+ V+ + +PF
Sbjct: 277 GGRTVKISIYDVVVGDVIPLRIGDQVPADGVLISGHSLAIDESSMTGESKIVHKDQKSPF 336
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
L+SG KV +G MLVT VG+ T+WG LMA++SE +ETPLQV+LNG+AT IG +GL
Sbjct: 337 LMSGCKVADGVGNMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGLATFIGIVGLSV 396
Query: 365 AVVTFAVMVQGLFTRKLQE---GTHW---TWSGDDALE-ILEFFXXXXXXXXXXXPEGLP 417
A+V ++ FT Q+ T + T S D ++ ++ F PEGLP
Sbjct: 397 ALVVLVALLVRYFTGTTQDTNGATQFIKGTTSISDIVDDCVKIFTIAVTIVVVAVPEGLP 456
Query: 418 LAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477
LAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV++
Sbjct: 457 LAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYAGGSK 516
Query: 478 KEV-DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEF 535
+V DN G P + L+ + + NT G + +G + EI G+PTE AIL +
Sbjct: 517 MDVADNPSGLH------PKLVA-LISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSW 569
Query: 536 GLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595
LG F R S I+ PFNS KK+ GV + + +H KGA+EI+LA C +++
Sbjct: 570 AYKLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLRGDSEVFIHWKGAAEIVLACCTQYM 629
Query: 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC--MEIGN----EFSADA-PIPTEG 648
+SNG + + E+ I+ A +LR + +AC E+ + D +P +
Sbjct: 630 DSNGTLQSI-ESQKEFFRVAIDSMAKNSLRCVAIACRTQELNQVPKEQEDLDKWALPEDE 688
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA-- 706
+ IVGIKDP RPGV+E+V IC SAG+ VRMVTGDN+ TAKAIA ECGIL+ + A
Sbjct: 689 LILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTEAVE 748
Query: 707 ---IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763
IEG FRE S++E ++ KI VM RSSP DK LV+ LR G+VVAVTGDGTNDA
Sbjct: 749 PTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKN-GDVVAVTGDGTNDA 807
Query: 764 PALHEADIGLAMGIAGTEVELE 785
PALHEADIGL+MGI+GTEV E
Sbjct: 808 PALHEADIGLSMGISGTEVAKE 829
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 801 (287.0 bits), Expect = 4.9e-142, Sum P(2) = 4.9e-142
Identities = 179/465 (38%), Positives = 271/465 (58%)
Query: 96 FQICPDELGSIVEGHDIKKLKV-HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINK 154
+ I +EL V+ D + +K +GGV G++++L ++ +G+S E R +GINK
Sbjct: 17 YSITNEELSGYVQEEDYEAIKQRYGGVSGLSKRLGSNEENGLSQQEATNEERIHRFGINK 76
Query: 155 FTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214
E + + ++W+A+HD TL+IL V A+VS+++G+ E G DG I++++++VV
Sbjct: 77 MNEIAQKSLFFFIWQAIHDKTLIILIVSAVVSIILGLTVEDRKTGWIDGTAILVAVIIVV 136
Query: 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADG 274
VTA +DY + +F+ L+ + + V V R G IS+YD++ GD+V L GD +PADG
Sbjct: 137 LVTAGNDYNKEKKFRKLNTIRNERNVSVVRGGHLASISVYDVVVGDVVKLETGDTIPADG 196
Query: 275 LFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMA 334
L+++G S+ ++ESS+TGES+ + PF LSG +V GS MLV VG +QWGKL
Sbjct: 197 LYIAGQSIAVDESSMTGESDQKRKSNDRPFFLSGCQVLEGSASMLVIAVGPNSQWGKLKL 256
Query: 335 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDA 394
L + D +TPL KL +A IGK GL A++TF V++ +++G W WS +
Sbjct: 257 LL-QSPDSDTPLTQKLEKLAETIGKFGLIAAILTFGVLLLKYVIVFVKDGHTWHWS--EL 313
Query: 395 LEILEFFXXXXXXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454
I+ F PEGLPLAVT+SLA++M KMM D+ LVRHL ACETMG AT+IC
Sbjct: 314 GTIVGFVVTAITIIVVAVPEGLPLAVTISLAYSMMKMMKDQNLVRHLEACETMGGATNIC 373
Query: 455 SDKTGTLTTNHMTVLKACICEEIKE---VDNSKGTPAFGS----SIPASASKLLLQSIFN 507
SDKTGTLT N MTV+K I + I V+N K + + S P+S+S +++N
Sbjct: 374 SDKTGTLTQNRMTVVKKIIGKSINSDDFVENGKSSMSDQQRDIYSSPSSSSSR--HNVYN 431
Query: 508 NTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 552
++G V + E+L +L G+ L E+ ++
Sbjct: 432 DSGK--VNQHDCEMEMLSNSRILTLLAEGISLNSTAYIEKHTDRL 474
|
|
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
Identities = 314/771 (40%), Positives = 471/771 (61%)
Query: 35 RKRRFRFTANLSKRFEAEAIR-----RSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPE 89
R+ RF + A S R ++ R + + ++ +S AL+ G ++S +P
Sbjct: 26 RRWRFAYAAIYSMRAMLSLVKEIVPARIDPKTSDASLSLSYTALESGEGAKINS---MPL 82
Query: 90 EVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEI 149
+ I ++L I++G D+ ++ GGVEG+A L T+ T GI +E ++RR+++
Sbjct: 83 SYVPA---IDQEQLVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDL 139
Query: 150 YGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMS 209
+G N + + P +G +V+EA D+T++IL VCA+ SL GI G +G ++G I ++
Sbjct: 140 FGSNTYHKPPPKGLLFFVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVA 199
Query: 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 269
+ LV+ V+A S+++Q QF L + I V+V R+ R+ ISI+D++ GD+V L +GDQ
Sbjct: 200 VFLVIVVSALSNFRQERQFDKLSKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQ 259
Query: 270 VPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQ 328
+PADGLF+ G S+ ++ESS+TGES+ + V+ NPFL SGTK+ +G +MLV +VGM T
Sbjct: 260 IPADGLFLEGHSLQVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTT 319
Query: 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWT 388
WG+ M+++++ + TPLQV+L+ + + IGKIGL A + V++ FT ++
Sbjct: 320 WGQTMSSINQDSSERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNTEKEGKRE 379
Query: 389 WSGD----DAL--EILEFFXXXXXXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442
++G D + ++ PEGLPLAVTL+LA++MK+MM+D+A+VR L+
Sbjct: 380 YNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLS 439
Query: 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502
ACETMGSAT IC+DKTGTLT N M V K + +E D++K I LL
Sbjct: 440 ACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHEDSTK-------MISPDVLDLLY 492
Query: 503 QSIFNNTGGEVVIGEGNKT-EILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPFNS 560
Q NT G V + + T E G+PTE A+L + +L LG D ++ +Q ++++VE F+S
Sbjct: 493 QGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSS 552
Query: 561 VKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619
KK+ GV++ + VH KGA+E++LA C + S G V ++ A + + I+
Sbjct: 553 AKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGM 612
Query: 620 ASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV 679
A+ +LR + A N D+ + +G T +GIVG+KDP RPGV ++V C+ AG+T+
Sbjct: 613 AASSLRCIAFAHKIASN----DSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTI 668
Query: 680 RMVTGDNINTAKAIARECGILTDNG-----IAIEGPEFREKSDEELSKLIPKIQVMARSS 734
+M+TGDN+ TAKAIA ECGIL N +EG +FR +DEE + + KI+VMARSS
Sbjct: 669 KMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSS 728
Query: 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELE 785
P DK +VK LR G VVAVTGDGTNDAPAL EADIGL+MGI GTEV E
Sbjct: 729 PSDKLLMVKCLRLK-GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKE 778
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q2QMX9 | ACA1_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7796 | 0.9824 | 0.7696 | yes | no |
| Q37145 | ACA1_ARATH | 3, ., 6, ., 3, ., 8 | 0.8101 | 0.9824 | 0.7696 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XIV0616 | hypothetical protein (1020 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 799 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-159 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-104 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-103 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 8e-98 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-81 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 3e-63 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-62 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-58 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 7e-56 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-48 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-40 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 7e-32 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-28 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-25 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 7e-25 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 6e-24 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-23 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-22 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 9e-22 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 7e-21 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-20 | |
| pfam12515 | 47 | pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi | 2e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-19 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-17 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-17 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-17 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 9e-14 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-13 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 3e-12 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 7e-12 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-10 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-09 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-08 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-08 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-07 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 5e-07 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 4e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 7e-05 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 0.002 | |
| pfam12710 | 122 | pfam12710, HAD, haloacid dehalogenase-like hydrola | 0.003 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 822 bits (2124), Expect = 0.0
Identities = 347/698 (49%), Positives = 464/698 (66%), Gaps = 22/698 (3%)
Query: 101 DELGSIVEG--HDIKKLKVH-----GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGIN 153
++G + DI K + GG EGIA KL T + +G+ S L RR+++YG N
Sbjct: 18 FDVGVSILTDLTDIFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKN 77
Query: 154 KFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGI-----ATEGWPKGAHDGLGIVM 208
+ E P + F VW AL D TL++L+V A+VSLV+G+ G +G+ I++
Sbjct: 78 ELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILV 137
Query: 209 SILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268
S++LVV VTA +DYK+ LQF+ L+REK + V R G ++ISI+D++ GDIV L GD
Sbjct: 138 SVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD 197
Query: 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRT 327
VPADG+F+SG S+ I+ESS+TGES+P+ + +PFLLSGT V GS +MLVT VG+ +
Sbjct: 198 VVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNS 257
Query: 328 QWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW 387
GKLM L + G+D TPLQ KL+ +A +IGK G+ AV+ F V+ R ++
Sbjct: 258 FGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRD 317
Query: 388 TWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETM 447
T +DA L+ F IAVTIVVVAVPEGLPLAVT++LA++MKKMM D LVRHLAACETM
Sbjct: 318 T--EEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETM 375
Query: 448 GSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFN 507
GSAT+ICSDKTGTLT N M+V++ I E+ V + ++P +L++ I
Sbjct: 376 GSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD------VLRNVPKHVRNILVEGISL 429
Query: 508 NTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGV 567
N+ E V+ G K +G+ TE A+L+FGLLL D+Q R K+VK+ PFNS +K M V
Sbjct: 430 NSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSV 489
Query: 568 VIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTL 627
V++ G +R KGASEI+L C K L+SNGE P+++ + + IE AS+ALRT+
Sbjct: 490 VVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTI 549
Query: 628 CLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687
CLA + E P +G T IG+VGIKDP+RPGV+E+V C+ AGITVRMVTGDNI
Sbjct: 550 CLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI 609
Query: 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747
+TAKAIAR CGILT G+A+EG EFR EE+ ++PK++V+ARSSP+DK LV L+
Sbjct: 610 DTAKAIARNCGILTFGGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLK- 668
Query: 748 TLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELE 785
+GEVVAVTGDGTNDAPAL AD+G +MGI+GTEV E
Sbjct: 669 DMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKE 706
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 485 bits (1250), Expect = e-159
Identities = 241/680 (35%), Positives = 347/680 (51%), Gaps = 57/680 (8%)
Query: 124 IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCA 183
+ +L TS T G+S E + RR + YG N+ E R D +++L V A
Sbjct: 33 LLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAA 90
Query: 184 LVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243
L+S VG W D + I++ +++ + +Y+ + L ++ +V
Sbjct: 91 LLSAFVGD----WVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL-KKMSSPKAKVL 145
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-- 301
R+G +I +L+PGDIV L GD VPAD + + ++ES+LTGES PV AL
Sbjct: 146 RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPL 205
Query: 302 -----------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 350
+ L SGT V +G K +V G T++GK+ L + +TPLQ KL
Sbjct: 206 TKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKL 265
Query: 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410
N + + + L + F V GLF G+ LE A+ + V
Sbjct: 266 NKLGKFLLVLALVLGALVFVV---GLFRG-----------GNGLLESFLT---ALALAVA 308
Query: 411 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK 470
AVPEGLP VT++LA ++M D A+VR L A ET+GS ICSDKTGTLT N MTV K
Sbjct: 309 AVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368
Query: 471 ACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTET 530
I K++D+ + + LL + N+ V E N G PTE
Sbjct: 369 IYINGGGKDIDDKDLKD------SPALLRFLLAAALCNS----VTPEKNGWYQAGDPTEG 418
Query: 531 AILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588
A++EF LG D I+ PF+S +K+M V+++ EG + + KGA E+IL
Sbjct: 419 ALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVIL 478
Query: 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFSADAPIPTE 647
C S GE+ PL E + L E +++ ASE LR L +A ++ E +
Sbjct: 479 ERCK----SIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIES 534
Query: 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGI 705
+G+ GI+DP R VKE++ R AGI V M+TGD++ TA AIA+ECGI + + +
Sbjct: 535 DLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESAL 594
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
I+G E SDEEL++L+ ++ V AR SP K +V+ L+ G VVA+TGDG NDAPA
Sbjct: 595 VIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQ-KSGHVVAMTGDGVNDAPA 653
Query: 766 LHEADIGLAMGIAGTEVELE 785
L AD+G+AMG GT+ E
Sbjct: 654 LKAADVGIAMGGEGTDAAKE 673
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 341 bits (877), Expect = e-104
Identities = 216/695 (31%), Positives = 341/695 (49%), Gaps = 81/695 (11%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWV-YVWEALHDMTLMIL 179
VE KL T + +G+++S+ +RR +G N+F W ++ + + + +++L
Sbjct: 9 VEETCSKLQTDLQNGLNSSQEASHRRA-FHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
A++S+ +G D + I ++IL+VV V +Y+ + L++
Sbjct: 68 IASAVISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPP-E 118
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN-- 297
+ R G + L+PGD+V L +GD+VPAD V + I+ES+LTGE+ PV+
Sbjct: 119 CHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKV 178
Query: 298 ---VNALNPFLLS--------GTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346
+ A L+ GT V+ G K +V G T++G + + +TPL
Sbjct: 179 TAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL 238
Query: 347 QVKLNGVATIIGKIGLFFAVVTFAV----MVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402
Q ++ +G ++V+F V + G F +G W LE F
Sbjct: 239 QKSMD-------LLGKQLSLVSFGVIGVICLVGWF-----QGKDW----------LEMFT 276
Query: 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 462
I+V++ V A+PEGLP+ VT++LA + +M +A+VR L + ET+GS ICSDKTGTLT
Sbjct: 277 ISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLT 336
Query: 463 TNHMTVLKACICEEIKEVDNSKGTPAFGSSI-----------PASASKLLLQSIFNNTGG 511
NHMTV K + + + N+ FG I A + L ++ NN
Sbjct: 337 KNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA-- 394
Query: 512 EVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIEL 571
+LG PT+ A++E + G R+ V PF+S +K M V
Sbjct: 395 ---KFRNEADTLLGNPTDVALIELLMKFG--LDDLRETYIRVAEVPFSSERKWMAVKCVH 449
Query: 572 PEGGFR-VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 630
+ KGA E +L C + +G+ + L + + + E + AS LR + A
Sbjct: 450 RQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFA 509
Query: 631 CMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTA 690
+ T +G+VGI DP RPGVKE+V + G+ + M+TGD+ TA
Sbjct: 510 SGPEKGQL-----------TFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETA 558
Query: 691 KAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750
+IAR G+ + ++ G + D++LS+++PK+ V AR+SP K +VK L+ G
Sbjct: 559 VSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQ-KRG 617
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELE 785
+VVA+TGDG NDAPAL ADIG+AMG GT+V E
Sbjct: 618 DVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKE 652
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 327 bits (840), Expect = e-103
Identities = 178/581 (30%), Positives = 264/581 (45%), Gaps = 120/581 (20%)
Query: 206 IVMSILLVVFVT-ATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHL 264
+++ +LLVV D +SL DR V RNG ++I DL+PGD+V +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLS----DRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF---------LLSGTKVQNGS 315
G+ VPADG+ +SG S ++ES+LTGES PV AL + +GT V G+
Sbjct: 61 KSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 316 CKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQG 375
++VT G+ T G++ + G + TPLQ K + + I + L + + +
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFI 179
Query: 376 LFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK 435
D I + A+ ++V+ VP LP AVT++LA ++
Sbjct: 180 RGW--------------DPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKG 225
Query: 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPA 495
LVR+L A E +G +CSDKTGTLT N MT+ I + +
Sbjct: 226 ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDG-----GKEDNSSS------- 273
Query: 496 SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKV 555
+V + N + G P E A+L+ L+G + KI+ V
Sbjct: 274 -----------------LVACDNN--YLSGDPMEKALLKSAELVGKAD-KGNKEYKILDV 313
Query: 556 EPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615
PF+SV K+M V++E P+G + KGA E IL C N+ E
Sbjct: 314 FPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC------------------NNYEEK 355
Query: 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675
+ A + LR L A + + +G++ +DP+RP KE++ ++A
Sbjct: 356 YLELARQGLRVLAF----------ASKELEDD-LEFLGLITFEDPLRPDAKETIEELKAA 404
Query: 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735
GI V M+TGDN+ TAKAIA+E GI V AR SP
Sbjct: 405 GIKVVMITGDNVLTAKAIAKELGID----------------------------VFARVSP 436
Query: 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
K +V+ L+ G +VA+TGDG NDAPAL +AD+G+AMG
Sbjct: 437 EQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG 476
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 324 bits (832), Expect = 8e-98
Identities = 217/689 (31%), Positives = 308/689 (44%), Gaps = 101/689 (14%)
Query: 167 VWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIV--MSILLVVFVTATSDYKQ 224
V E D+ + IL + A VS V+ EG V ILL++ A Q
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEG----EETVTAFVEPFVILLILVANAIVGVWQ 56
Query: 225 SL-------QFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277
K+ + E K V R+G I DL+PGDIV L +GD+VPAD +
Sbjct: 57 ERNAEKAIEALKEYESEHAK----VLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVL 112
Query: 278 SGFSVLINESSLTGESEPVNV--------NALNP----FLLSGTKVQNGSCKMLVTTVGM 325
S ++ +++S LTGES VN A+N L SGT V G + +V GM
Sbjct: 113 SLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGM 172
Query: 326 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT 385
T+ GK+ + ++TPLQ KL+ ++ K+ ++ + + + L G
Sbjct: 173 STEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232
Query: 386 HWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACE 445
+ +F IAV + V A+PEGLP +T LA +KM A+VR L + E
Sbjct: 233 --------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVE 284
Query: 446 TMGSATSICSDKTGTLTTNHMTVLKACICE----EIKE--VDNSKGTPAFGS----SIPA 495
T+G T ICSDKTGTLTTN M+V K + + E V + P G A
Sbjct: 285 TLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVA 344
Query: 496 SASKLLL-------------QSIFNNTGGEVVIGEGNKTEILGTPTETAIL-------EF 535
L FN G E +G TE A+
Sbjct: 345 GGQDAGLEELATIAALCNDSSLDFNERKGVY--------EKVGEATEAALKVLVEKMGLP 396
Query: 536 GLLLGGDFQAERQ----------ASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585
G + K+ +E F+ +K M V+ + P G ++ KGA E
Sbjct: 397 ATKNGVSSKRRPALGCNSVWNDKFKKLATLE-FSRDRKSMSVLCK-PSTGNKLFVKGAPE 454
Query: 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFSADAPI 644
+L C LN +G VPL + N + I++ + +ALR L LA +I + D
Sbjct: 455 GVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLS 514
Query: 645 PTEGY-------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 697
+ T IG+VG+ DP RP V +++ CR+AGI V M+TGDN TA+AI R
Sbjct: 515 DPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI 574
Query: 698 GILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVV 753
GI + + + G EF E + + +R P K LV+ L+ GE+V
Sbjct: 575 GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQ-EQGEIV 633
Query: 754 AVTGDGTNDAPALHEADIGLAMGIAGTEV 782
A+TGDG NDAPAL +ADIG+AMG +GTEV
Sbjct: 634 AMTGDGVNDAPALKKADIGIAMG-SGTEV 661
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 3e-81
Identities = 223/726 (30%), Positives = 343/726 (47%), Gaps = 96/726 (13%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIY---GINKFTESPARGFWVYVWEALHDMTLM 177
++ + K T ++ G+S + R EI G N T P WV L M
Sbjct: 22 LDELERKYGTDLSKGLSAA-----RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSM 76
Query: 178 ILAVCALVSLVV-GI--ATEGWPKGAHDGLGIVMSILLVVFVTAT-SDYKQSLQFKDLDR 233
+L + A++ + GI +TE P+ + LG+V+S VV +T S Y+++ K ++
Sbjct: 77 LLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLS--AVVIITGCFSYYQEAKSSKIMES 134
Query: 234 EKKKITVQ--VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTG 291
K + Q V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLTG
Sbjct: 135 FKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTG 194
Query: 292 ESEP-------VNVNAL---NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-G 340
ESEP + N L N S V+ G+ + +V G RT G++ A+L+ G
Sbjct: 195 ESEPQTRSPEFTHENPLETRNIAFFSTNCVE-GTARGIVVNTGDRTVMGRI-ASLASGLE 252
Query: 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 400
+ +TP+ +++ II + +F V F + L G W LE + F
Sbjct: 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFIL--------SLILGYTW-------LEAVIF 297
Query: 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGT 460
+ I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTGT
Sbjct: 298 L---IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGT 354
Query: 461 LTTNHMTVLKACICEEIKEVDNSKGTP--AFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518
LT N MTV +I E D ++ +F S + + + N G+
Sbjct: 355 LTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNR--AVFKAGQE 412
Query: 519 N----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEG 574
N K + G +E+A+L+ L G R+ + V PFNS K + E +
Sbjct: 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDP 472
Query: 575 GFRVHC---KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631
H KGA E IL C L +G+ PL+E + R L
Sbjct: 473 RDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCH 531
Query: 632 MEI-------GNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVT 683
+ + G +F D PT+ +G++ + DP R V ++V CRSAGI V MVT
Sbjct: 532 LYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 591
Query: 684 GDNINTAKAIARECGILTDNG-----IA-------------------IEGPEFREKSDEE 719
GD+ TAKAIA+ GI+++ IA + G + ++ + E+
Sbjct: 592 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQ 651
Query: 720 LSKLI---PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
L +++ +I V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMG
Sbjct: 652 LDEILKYHTEI-VFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 777 IAGTEV 782
IAG++V
Sbjct: 710 IAGSDV 715
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 3e-63
Identities = 178/659 (27%), Positives = 288/659 (43%), Gaps = 121/659 (18%)
Query: 135 GISTSEHLLNRRKEIYGINKFTE---SPARGFWVYVWEALHDMTLMILAVCALVSLVVGI 191
G++++E +R YG N+ E SP F + W L + + A+++ I
Sbjct: 1 GLTSAE--AKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWV----MEAAAIIA----I 50
Query: 192 ATEGWPKGAHDGLGIVMSILL---VVFV------TATSDYKQSLQFKDLDREKKKITVQV 242
A E W D + I+ +LL + F+ A KQSL K +V
Sbjct: 51 ALENWV----DFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPK----------ARV 96
Query: 243 ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-L 301
R+G ++I +L+PGD+V L +GD VPAD G + +++++LTGES PV
Sbjct: 97 LRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGD 156
Query: 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
+ SG+ V+ G + +VT GM T +GK A + LQ I+ KIG
Sbjct: 157 IAY--SGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQK-------ILSKIG 207
Query: 362 LF---FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
LF V + + LF + G+ E L+F A+ ++V +P +P
Sbjct: 208 LFLIVLIGVLVLIELVVLFFGR----------GESFREGLQF---ALVLLVGGIPIAMPA 254
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
+++++A ++ KA+V L A E + +CSDKTGTLT N +++ +
Sbjct: 255 VLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF 314
Query: 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL 538
+ D+ A S E +TA+L G
Sbjct: 315 DKDDVLLYAALASRE-----------------------EDQD------AIDTAVL--GSA 343
Query: 539 LGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC-KGASEIILAACDKFLNS 597
D + R K+++ PF+ V K+ +E PE G R KGA ++IL CD
Sbjct: 344 K--DLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCD----- 396
Query: 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI 657
+ E + E +++ AS R L +A D + +G++ +
Sbjct: 397 --NKKEIEEK----VEEKVDELASRGYRALGVA--------RTDEE---GRWHFLGLLPL 439
Query: 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREK 715
DP R KE++ R G+ V+MVTGD++ AK AR G+ T+ + + R+
Sbjct: 440 FDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDD 499
Query: 716 SDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
L +++ A P K+ +V+ L+ G +V +TGDG NDAPAL +AD+G+A
Sbjct: 500 LPSGLGEMVEDADGFAEVFPEHKYEIVEILQ-KRGHLVGMTGDGVNDAPALKKADVGIA 557
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 225 bits (574), Expect = 3e-62
Identities = 186/691 (26%), Positives = 296/691 (42%), Gaps = 107/691 (15%)
Query: 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLM 177
G E + KL T G++ E + R +G N+ E + A ++ +
Sbjct: 17 QMGKETLLRKLGVHET-GLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIY 73
Query: 178 ILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKK 237
ILA+ VS + D L + I L+V + + Q + + K
Sbjct: 74 ILAMLMGVSYLT------------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKN 121
Query: 238 I---TVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 288
+ T V R NG ++ I L+PGD++ L GD +PAD +S + IN+S+
Sbjct: 122 MVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSA 181
Query: 289 LTGESEPV-------NVNALNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336
LTGES PV GT V +G + +V G T +G L
Sbjct: 182 LTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA 241
Query: 337 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 396
+E T + V+ ++ + L V M+ GL W
Sbjct: 242 TERRGQ-TAFDKGVKSVSKLLIRFMLVMVPVVL--MINGL--------MKGDW------- 283
Query: 397 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSD 456
LE F A+ + V PE LP+ V+ +LA M K +V+ L+A + G+ +C+D
Sbjct: 284 -LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTD 342
Query: 457 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN---TGGEV 513
KTGTLT + + E K +D+S G + ++L + N+ TG +
Sbjct: 343 KTGTLTQDKI--------ELEKHIDSS-GETS---------ERVLKMAWLNSYFQTGWKN 384
Query: 514 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIE 570
V+ + A+L D A RQ AS+ KV+ PF+ ++++ VV+E
Sbjct: 385 VL-------------DHAVLAKL-----DESAARQTASRWKKVDEIPFDFDRRRLSVVVE 426
Query: 571 LPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 630
R+ CKGA E +L C G VV L+E+ + L + + + +R + +A
Sbjct: 427 NRAEVTRLICKGAVEEMLTVCTH-KRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 631 CMEI---GNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687
+ +F+ E G +G DP + KE++A GI V+++TGDN
Sbjct: 486 TKTLKVGEADFTK---TDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542
Query: 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747
I +E GI D + G + E SDEEL++ + K + AR +PM K ++ L+
Sbjct: 543 IVTARICQEVGI--DANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKK 600
Query: 748 TLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
G V GDG NDAPAL +AD+G+++ A
Sbjct: 601 A-GHTVGFLGDGINDAPALRKADVGISVDTA 630
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 213 bits (545), Expect = 3e-58
Identities = 181/677 (26%), Positives = 297/677 (43%), Gaps = 103/677 (15%)
Query: 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIA 192
+G++ +E + +E +G N+ +WV++W + ++L + +S A
Sbjct: 65 PEGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISY----A 118
Query: 193 TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKI--TVQVARNG---- 246
TE L + +S LL A S K D K + T V R
Sbjct: 119 TEDLFAAGVIALMVAISTLLNFIQEARST-------KAADALKAMVSNTATVLRVINDKG 171
Query: 247 --FRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV-------N 297
+I I L+PGDI+ L GD +PAD + + + ++SLTGES PV
Sbjct: 172 ENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQ 231
Query: 298 VNALNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352
NP GT V +G+ + +V G T +G+L +SE + Q ++
Sbjct: 232 PEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISR 291
Query: 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412
V+ ++ + F V+ V++ +T+ G W E A+++ V
Sbjct: 292 VSWLLIR---FMLVMAPVVLLINGYTK----GDWW-----------EAALFALSVAVGLT 333
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
PE LP+ VT +LA K+ K +V+ L A + G+ +C+DKTGTLT + + VL
Sbjct: 334 PEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKI-VL--- 389
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN----TGGEVVIGEGNKTEILGTPT 528
T G + S+ +L S + N TG L
Sbjct: 390 ----------ENHTDISGKT-----SERVLHSAWLNSHYQTG-------------LKNLL 421
Query: 529 ETAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCKGASE 585
+TA+LE G D ++ R AS+ K++ PF+ +++M VV+ ++ CKGA E
Sbjct: 422 DTAVLE-----GVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALE 476
Query: 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIP 645
IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 477 EILNVCSQ-VRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRAD 535
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI 705
G + DP + ++ +++G+TV+++TGD+ A + E G+ D G
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL--DAGE 593
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
+ G + SD+EL+ L + + AR +PM K +V L+ G VV GDG NDAPA
Sbjct: 594 VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGINDAPA 652
Query: 766 LHEADIGL----AMGIA 778
L ADIG+ A+ IA
Sbjct: 653 LRAADIGISVDGAVDIA 669
|
Length = 902 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 190 bits (486), Expect = 7e-56
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 20/237 (8%)
Query: 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 269
+L+ + A +Y+ K L + V R+G +I +L+ GDIV L GD+
Sbjct: 6 VLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLKPGDR 65
Query: 270 VPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQW 329
VPADG + G S+ ++ES+LTGES PV + + +GT V +G K++VT G T+
Sbjct: 66 VPADGRIIEG-SLEVDESALTGESLPVEKSR-GDTVFAGTVVLSGELKVIVTATGEDTEL 123
Query: 330 GKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389
GK+ + E +TPLQ L+ +A I+ I L A++ F + +
Sbjct: 124 GKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLI--------------WFFR 169
Query: 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446
GD LE A+ ++V A PE LPLAV L+LA ++ LV++L+A ET
Sbjct: 170 GGD----FLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 2e-48
Identities = 179/694 (25%), Positives = 297/694 (42%), Gaps = 118/694 (17%)
Query: 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186
L+T G++ + R + YG N+ V + +A ++ + +L V A +S
Sbjct: 38 NLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAIS 94
Query: 187 LVVGIATEGW---PKGAHDGLGIVMSILLVVFVTA---------TSDYKQSLQFKDLDRE 234
T+ W +G L V+ IL +V ++ ++ ++L K + R
Sbjct: 95 FF----TDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEAL--KAMVR- 147
Query: 235 KKKITVQ----VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
TV RR+I + +L+PGDIVHL GD +PAD + + I+++ LT
Sbjct: 148 -TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLT 206
Query: 291 GESEPV----------------------NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQ 328
GE+ PV ++ L GT V +G+ +V G RT
Sbjct: 207 GEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266
Query: 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWT 388
+G L ++ G +T +N V+ ++ I +V +++ G T
Sbjct: 267 FGSLAKSIV-GTRAQTAFDRGVNSVSWLL--IRFMLVMVPVVLLINGF--------TKGD 315
Query: 389 WSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMG 448
W +AL FA+AV V PE LP+ V+ +LA M K +V+ L A + G
Sbjct: 316 WL--EAL----LFALAVA--VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFG 367
Query: 449 SATSICSDKTGTLTTN-----HMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503
+ +C+DKTGTLT + H + E + ++ A+ +S S K L+
Sbjct: 368 AMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQL-------AWLNSFHQSGMKNLM- 419
Query: 504 SIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKK 563
+ A++ F + K+ ++ PF+ V++
Sbjct: 420 -------------------------DQAVVAFAEGNP-EIVKPAGYRKVDEL-PFDFVRR 452
Query: 564 QMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEA 623
++ VV+E +G + CKGA E +LA + V PL+EA L E + ++
Sbjct: 453 RLSVVVEDAQGQHLLICKGAVEEMLAVATH-VRDGDTVRPLDEARRERLLALAEAYNADG 511
Query: 624 LRTLCLACMEIGNEFSADAPIPTE---GYTCIGIVGIKDPMRPGVKESVAICRSAGITVR 680
R L +A EI + A T G + DP + ++A R G+ V+
Sbjct: 512 FRVLLVATREIPGG-ESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVK 570
Query: 681 MVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739
++TGDN I TAK I RE G+ + G + G E D L++ + + V A+ +P+ K
Sbjct: 571 VLTGDNPIVTAK-ICREVGL--EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627
Query: 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
++K L+ G V GDG NDAPAL +AD+G+
Sbjct: 628 RVLKALQAN-GHTVGFLGDGINDAPALRDADVGI 660
|
Length = 903 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 2e-40
Identities = 163/761 (21%), Positives = 277/761 (36%), Gaps = 181/761 (23%)
Query: 129 STSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVW-EALHDMTLMILAVCALVSL 187
++G++T + +RK YG N+ E P F + E LH V + S+
Sbjct: 133 CAGHSNGLTTGDI--AQRKAKYGKNEI-EIPVPSFLELLKEEVLHP-----FYVFQVFSV 184
Query: 188 VVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF 247
++ + E + SI L V+ KQ + +D+ K +V V RNG
Sbjct: 185 ILWLLDEYYYYSLCIVFMSSTSISLSVY----QIRKQMQRLRDM--VHKPQSVIVIRNGK 238
Query: 248 RRKISIYDLLPGDIVHLCMGDQ--VPADGLFVSGFSVLINESSLTGESEPVNVNAL---- 301
I+ +L+PGDIV + ++ +P D + +SG S ++NES LTGES PV +
Sbjct: 239 WVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNG 297
Query: 302 -------------NPFLLSGTKV-------QNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
L GTK+ + C +V G T G+L+ ++
Sbjct: 298 DDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFA-VMVQGLFTRKLQEGTHWTWSGDDALEILEF 400
P K + A++ F +++ + D + +
Sbjct: 356 --KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELI---------------KDGRPLGKI 398
Query: 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC------ETMGSATSIC 454
++ I+ + VP LP +++ + ++ L + C G C
Sbjct: 399 ILRSLDIITIVVPPALPAELSIGINNSLA------RLKKKGIFCTSPFRINFAGKIDVCC 452
Query: 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVV 514
DKTGTLT + + + +E K S P+ K L T +
Sbjct: 453 FDKTGTLTEDGLDLRGVQGLSGNQEFL--KIVTEDSSLKPSITHKALA------TCHSLT 504
Query: 515 IGEGNKTEILGTPTETAILEFGLLLGGDFQAERQAS------------------KIVKVE 556
EG ++G P + + E G + + +++ I++
Sbjct: 505 KLEGK---LVGDPLDKKMFEA---TGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRF 558
Query: 557 PFNSVKKQMGVVIELPEGGFRV-HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615
F+S ++M V++ + KGA E I + C E VP + E
Sbjct: 559 QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP------ETVPSDYQ------EV 606
Query: 616 IEKFASEALRTLCLACMEIGN-EFSADAPIPTEGYTC----IGIVGIKDPMRPGVKESVA 670
++ + E R L LA E+ + + +G + ++P++P KE +
Sbjct: 607 LKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIK 666
Query: 671 ICRSAGITVRMVTGDNINTAKAIARECG-------------------------------- 698
+ A I M+TGDN TA +ARECG
Sbjct: 667 ELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSI 726
Query: 699 ---------------------ILTDNGIAIEGPEFR---EKSDEELSKLIPKIQVMARSS 734
+ + +A+ G F S E L +L+ V AR +
Sbjct: 727 PFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMA 786
Query: 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775
P K TLV+ L+ L V + GDG ND AL +AD+G+++
Sbjct: 787 PDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 7e-32
Identities = 83/252 (32%), Positives = 123/252 (48%), Gaps = 26/252 (10%)
Query: 557 PFNSVKKQMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNE 614
PF+S K+M + E G + ++ KGA E I+ C +G ++ PL + +
Sbjct: 532 PFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIA 591
Query: 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTE---------GYTCIGIVGIKDPMRPGV 665
+E A+E LR L A + D + E +G++GI DP R
Sbjct: 592 NMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNES 651
Query: 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA----------IEGPEFREK 715
+V C AGI V M+TGD TAKAIA+E GI+ N I + G +F
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL 711
Query: 716 SDEELSKLIPKIQVMARSSPMDKHTLVK--HLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
SDEE+ L V+AR +P K +++ H R A+TGDG ND+P+L A++G+
Sbjct: 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAF---CAMTGDGVNDSPSLKMANVGI 768
Query: 774 AMGIAGTEVELE 785
AMGI G++V +
Sbjct: 769 AMGINGSDVAKD 780
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 8e-28
Identities = 96/392 (24%), Positives = 156/392 (39%), Gaps = 82/392 (20%)
Query: 125 AEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCAL 184
AE + TSI +G+ T + +R KE G N+ + + + M+L +
Sbjct: 16 AEFIGTSIPEGL-THDEAQHRLKE-VGENRLEADSGIDAKAMLLHQVCNAMCMVL----I 69
Query: 185 VSLVVGIATEGWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQFKDLDREKKKITVQVA 243
++ + A W +G G++ +I+ + + + +YK L + V
Sbjct: 70 IAAAISFAMHDWIEG-----GVISAIIALNILIGFIQEYKAEKTMDSL-KNLASPMAHVI 123
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP 303
RNG I +DL+PGDI L GD +PAD + + +E+ LTGES PV +A
Sbjct: 124 RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHAT 183
Query: 304 F--------------LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG-------DD 342
F S + V G K + + ++ G + A L G D
Sbjct: 184 FGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKD 243
Query: 343 E----------------------------TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374
+ TPL KL+ +A I+ I + FA++ VM
Sbjct: 244 DPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAII---VMAA 300
Query: 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMND 434
F D + + +AI + I + +PE L +++++A M
Sbjct: 301 HKF---------------DVDKEVAIYAICLAISI--IPESLIAVLSITMAMGAANMSKR 343
Query: 435 KALVRHLAACETMGSATSICSDKTGTLTTNHM 466
+VR L A E +G+ ICSDKTGT+T M
Sbjct: 344 NVIVRKLDALEALGAVNDICSDKTGTITQGKM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 1e-25
Identities = 137/581 (23%), Positives = 238/581 (40%), Gaps = 116/581 (19%)
Query: 208 MSILLVVFVTATSDYKQSLQFKDLDREKKK-ITVQVARNGFRRKISIYDLLPGDIVHLCM 266
+++L F A ++ + Q L KK + +G K+ L GDIV +
Sbjct: 75 ITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEA 134
Query: 267 GDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTTVG 324
GD +P DG + G + ++ES++TGES PV + F + GT++ + + T
Sbjct: 135 GDVIPCDGEVIEGVAS-VDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANP 193
Query: 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 384
T +++A + +TP ++ L ++ + L F +VT + +
Sbjct: 194 GETFLDRMIALVEGAQRRKTPNEIALT---ILLIALTLVFLLVTATLWPFAAY------- 243
Query: 385 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC 444
G +A+ + A+ V ++ + GL A+ ++ M +++ + A
Sbjct: 244 ------GGNAISVTVLVALLVCLIPTTI-GGLLSAIGIA---GMDRVLGFNVIATSGRAV 293
Query: 445 ETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504
E G ++ DKTGT+T + S+ PA G A L S
Sbjct: 294 EACGDVDTLLLDKTGTITLGNRLA--------------SEFIPAQGVDEKTLADAAQLAS 339
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564
+ ++T P +I+ LG + + S F + +
Sbjct: 340 LADDT-----------------PEGKSIVILAKQLG--IREDDVQSLHATFVEFTAQTRM 380
Query: 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEAL 624
G+ ++ R+ KGA + I + + +NG +P + L++ +++ A +
Sbjct: 381 SGINLD----NGRMIRKGAVDAI----KRHVEANGGHIPTD------LDQAVDQVARQGG 426
Query: 625 RTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684
L + N G++ +KD ++ G+KE A R GI M+TG
Sbjct: 427 TPLVVC---EDNRI-------------YGVIYLKDIVKGGIKERFAQLRKMGIKTIMITG 470
Query: 685 DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744
DN TA AIA E G+ D+ IA PE DK L++
Sbjct: 471 DNRLTAAAIAAEAGV--DDFIAEATPE-------------------------DKIALIRQ 503
Query: 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELE 785
+ G++VA+TGDGTNDAPAL +AD+G+AM +GT+ E
Sbjct: 504 EQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKE 542
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 7e-25
Identities = 111/480 (23%), Positives = 173/480 (36%), Gaps = 147/480 (30%)
Query: 431 MMNDK----ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI------------- 473
M ++K A VR E +G I SDKTGTLT N M K I
Sbjct: 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395
Query: 474 ------------CEEIKEVDNSKGTPAF--------GSSIPASASKLLLQS--------- 504
E V++ T + A +
Sbjct: 396 DGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDF--------------QAERQAS 550
FN+ G E + + +P E A+++ +G F E +
Sbjct: 456 EFNDDGPEEITYQAA------SPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEY 509
Query: 551 KIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVN 610
+I+ V FNS +K+M V++ P+G ++ CKGA +I K L+S G V NE
Sbjct: 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF----KRLSSGGNQV--NEETKE 563
Query: 611 HLNETIEKFASEALRTLCLACMEIG-NEF---------------------SADAPIPTEG 648
HL E +ASE LRTLC+A E+ E+ A +
Sbjct: 564 HL----ENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKD 619
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---- 704
+G I+D ++ GV E++ + R AGI + ++TGD + TA I C +L+ N
Sbjct: 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIV 679
Query: 705 IAIEGPEFREKSDEELSK------------------------------LIPKIQVM---- 730
I + + + + L +++
Sbjct: 680 ITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQL 739
Query: 731 ---------ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781
R SP K +V+ ++ + G+ GDG ND + EAD+G+ GI+G E
Sbjct: 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKE 797
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 6e-24
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 174 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTA-----------TSDY 222
TL+ LA + + + +P + + +L+
Sbjct: 150 DTLVALA--TIGAYAYSLYATLFP------VYFEEAAMLIFLFLLGRYLEARAKGRARRA 201
Query: 223 KQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282
++L LD K TV V +G ++ + ++ GDIV + G+++P DG+ VSG S
Sbjct: 202 IRAL----LDLAPKTATV-VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS- 255
Query: 283 LINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342
++ES LTGES PV + +GT +GS + VT VG T +++ + E
Sbjct: 256 SVDESMLTGESLPVEKKP-GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSS 314
Query: 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402
+ P+Q + VA+ + L A +TFA+ W G E
Sbjct: 315 KAPIQRLADRVASYFVPVVLVIAALTFAL---------------WPLFGGGDWE--TALY 357
Query: 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 462
A+ ++V+A P L LA ++ + + L++ A E + ++ DKTGTLT
Sbjct: 358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLT 417
Query: 463 TNHMTV 468
V
Sbjct: 418 EGKPEV 423
|
Length = 713 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 5e-23
Identities = 138/529 (26%), Positives = 215/529 (40%), Gaps = 124/529 (23%)
Query: 255 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQ 312
+L GDIV + G+ +P+DG + G ++ES++TGES PV + F + GT+V
Sbjct: 122 ELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVL 180
Query: 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDE-TPLQVKLN---GVATIIGKIGLFFAVVT 368
+ K+ +T T + M L EG + + TP ++ L T+I AV T
Sbjct: 181 SDWLKIRITANPGETFLDR-MIALVEGAERQKTPNEIALTILLSGLTLI----FLLAVAT 235
Query: 369 FAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428
+SG A + A+ V ++ + GL A+ ++ M
Sbjct: 236 LYPFAI--------------YSGGGAASVTVLVALLVCLIPTTI-GGLLSAIGIA---GM 277
Query: 429 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTT-NHMTVLKACICEEIKEVDNSKGTP 487
++ + A E G ++ DKTGT+T N S+ P
Sbjct: 278 DRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQA---------------SEFIP 322
Query: 488 AFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAER 547
G S A L S+ + T P +I+E LG + + +
Sbjct: 323 VPGVSEEELADAAQLASLADET-----------------PEGRSIVELAKKLGIELREDD 365
Query: 548 QASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEA 607
S V PF + + G ++LP G R KGA + I +++ G +P
Sbjct: 366 LQSHAEFV-PFTAQTRMSG--VDLPGG--REIRKGAVDAIR----RYVRERGGHIP---- 412
Query: 608 AVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT-EGYTCIGIVGIKDPMRPGVK 666
E L A E+ P+ E +G++ +KD ++PG+K
Sbjct: 413 --------------EDLDA---AVDEVSR--LGGTPLVVVENGRILGVIYLKDIVKPGIK 453
Query: 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726
E A R GI M+TGDN TA AIA E G+ D+
Sbjct: 454 ERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-----------------DD-------- 488
Query: 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775
+A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+G+AM
Sbjct: 489 --FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAM 534
|
Length = 681 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 2e-22
Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 34/296 (11%)
Query: 174 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV-FVTATSDYKQSLQFKDLD 232
LM LA + + +G+ EG +++ + L+ + + + S L
Sbjct: 2 DLLMALA--TIAAYAMGLVLEGA---------LLLFLFLLGETLEERAKGRASDALSALL 50
Query: 233 REKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292
+ +G ++ + +L GDIV + G+++P DG+ +SG S ++ES+LTGE
Sbjct: 51 ALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGE 109
Query: 293 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352
S PV + + +GT +GS + VT +G + +++ + E + P+Q +
Sbjct: 110 SMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADR 168
Query: 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412
+A+ L A++TF V AL A+ ++VVA
Sbjct: 169 IASYYVPAVLAIALLTFVVW--------------LALGALGALYR------ALAVLVVAC 208
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
P L LA +++ A+ L++ A E + ++ DKTGTLTT TV
Sbjct: 209 PCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTV 264
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 9e-22
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564
N E N EI+G PTE+A+L F LG D + R V PFNS +K+
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKR 60
Query: 565 MGVVIELP-EGGFRVHCKGASEIILAACDKF 594
M V +L + G+R+ KGA E IL C
Sbjct: 61 MSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 7e-21
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 29/134 (21%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
+G++ + D +RP KE++A ++ GI V M+TGDN TA+AIA+E GI
Sbjct: 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI------------ 576
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
DE V A P DK +V+ L+ G VA+ GDG NDAPAL AD+
Sbjct: 577 -----DE----------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADV 620
Query: 772 GLAMGIAGTEVELE 785
G+AMG +GT+V +E
Sbjct: 621 GIAMG-SGTDVAIE 633
|
Length = 713 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 1e-20
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 175 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATS--DYKQSLQFKDLD 232
LM LA AL ++ +G EG ++LL++F + +Y + L
Sbjct: 3 LLMALA--ALGAVAIGEYLEG-------------ALLLLLFSIGETLEEYASGRARRALK 47
Query: 233 REKKKI--TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
+ T +V R G ++++ +L GD+V + G++VP DG+ +SG S ++ES+LT
Sbjct: 48 ALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALT 106
Query: 291 GESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 350
GES PV + + +G +G ++VT + + K++ + E + Q +
Sbjct: 107 GESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFI 165
Query: 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410
+ A + L A+ + V GL R W + A+ ++VV
Sbjct: 166 DRFARYYTPVVLAIALAIWLVP--GLLKR-------WPFW----------VYRALVLLVV 206
Query: 411 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
A P L ++ + A+ L++ AA E + ++ DKTGTLTT V
Sbjct: 207 ASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKV 264
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain | Back alignment and domain information |
|---|
Score = 85.1 bits (211), Expect = 2e-20
Identities = 30/48 (62%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEA 51
YL++ F D+ AKN+SEEAL+RWR+ G VKN +RRFR+TA+L+KR EA
Sbjct: 1 YLDDPF-DIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47
|
This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 92.3 bits (230), Expect = 2e-19
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 29/134 (21%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ + D ++P KE + + GI M+TGDN TAKA+A+E GI
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN---------- 455
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
V A P DK L+K L+ G+VVA+ GDG NDAPAL +AD+
Sbjct: 456 -----------------VRAEVLPDDKAALIKKLQ-EKGKVVAMVGDGINDAPALAQADV 497
Query: 772 GLAMGIAGTEVELE 785
G+A+G AGT+V +E
Sbjct: 498 GIAIG-AGTDVAIE 510
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 2e-17
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 30/135 (22%)
Query: 652 IGIVGIKDPMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP 710
+G++ ++D +RP KE++A + R+ GI + M+TGDN + A+A+A E GI
Sbjct: 376 LGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------- 425
Query: 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+V A P DK +VK L+ G VVA+ GDG NDAPAL AD
Sbjct: 426 -----------------EVHAELLPEDKLAIVKELQEE-GGVVAMVGDGINDAPALAAAD 467
Query: 771 IGLAMGIAGTEVELE 785
+G+AMG AG++V +E
Sbjct: 468 VGIAMG-AGSDVAIE 481
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 86.8 bits (216), Expect = 2e-17
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 30/124 (24%)
Query: 653 GIVGIKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ +KD ++PG+KE A R GI TV M+TGDN TA AIA E G+
Sbjct: 438 GVIYLKDIVKPGIKERFAELRKMGIKTV-MITGDNPLTAAAIAAEAGV------------ 484
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D+ L A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+
Sbjct: 485 -----DDFL----------AEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADV 528
Query: 772 GLAM 775
G+AM
Sbjct: 529 GVAM 532
|
Length = 679 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 3e-17
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304
+G ++ + L PGDIV + G+++P DG + G S ++ES +TGES PV +P
Sbjct: 99 DGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGESE-VDESLVTGESLPVPKKVGDP- 156
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
+++GT GS + T G T +++ + + + P+Q + VA + +
Sbjct: 157 VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAI 216
Query: 365 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424
A++TF + W G D + LE AVT++++A P L LA +
Sbjct: 217 ALITFVI---------------WLILGADFVFALEV---AVTVLIIACPCALGLATPTVI 258
Query: 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKA 471
A A + L++ A E + ++ DKTGTLT TV
Sbjct: 259 AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 2e-16
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 29/135 (21%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGILTDNGIAIEGP 710
+G + + D RP E++A ++ GI V M+TGD A+ +ARE GI
Sbjct: 354 LGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------- 403
Query: 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+V A P DK +VK LR VA+ GDG NDAPAL AD
Sbjct: 404 -----------------EVHAELLPEDKLEIVKELREK-YGPVAMVGDGINDAPALAAAD 445
Query: 771 IGLAMGIAGTEVELE 785
+G+AMG +G++V +E
Sbjct: 446 VGIAMGASGSDVAIE 460
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 9e-14
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 31/139 (22%)
Query: 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706
+G++ ++D +R +++++ ++ GI M+TGDN A AIA E GI
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI------- 607
Query: 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
+FR A P DK V L +A+ GDG NDAPA+
Sbjct: 608 ----DFR-----------------AGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAM 644
Query: 767 HEADIGLAMGIAGTEVELE 785
A IG+AMG +GT+V LE
Sbjct: 645 KAASIGIAMG-SGTDVALE 662
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 3e-13
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 29/129 (22%)
Query: 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 716
I+DP+R ++ AG + M+TGDN TA AIA+E GI
Sbjct: 647 IRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI----------------- 689
Query: 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
+V+A P K +K L++ G VA+ GDG NDAPAL +AD+G+AMG
Sbjct: 690 ----------DEVIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG 738
Query: 777 IAGTEVELE 785
G++V +E
Sbjct: 739 -GGSDVAIE 746
|
Length = 834 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 3e-12
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLM 177
VE + +L T + G++ +E R E YG N+ E + W D ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAE--AEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 178 ILAVCALVS 186
IL + A+VS
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 7e-12
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601
D ERQ ++ + F+S +K+M V++ P+ +V KGA + + D+ LN N V
Sbjct: 595 DIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMN--V 652
Query: 602 VPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN----------EFSADAPIPTEGY-- 649
+ EA HL+ ++S LRTL + E+ + E ++ A I
Sbjct: 653 IRATEA---HLH----TYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLR 705
Query: 650 ----------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 699
T +G I+D ++ GV E++ R+AGI V ++TGD TA +I +
Sbjct: 706 KVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765
Query: 700 LTDN 703
LT+
Sbjct: 766 LTNK 769
|
Length = 1178 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 64.7 bits (157), Expect = 1e-10
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 31/143 (21%)
Query: 636 NEFSADAPIP---TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 692
S P E +G++ +KD ++ G+ E R GI M TGDN TA
Sbjct: 414 KGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAAT 473
Query: 693 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752
IA+E G+ + +A P DK +++ + G +
Sbjct: 474 IAKEAGV---------------------------DRFVAECKPEDKINVIREEQAK-GHI 505
Query: 753 VAVTGDGTNDAPALHEADIGLAM 775
VA+TGDGTNDAPAL EA++GLAM
Sbjct: 506 VAMTGDGTNDAPALAEANVGLAM 528
|
Length = 673 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 1e-09
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
+G++ + DP+ PG +E++ + AGI + ++TGDN TA AIAR G+ A
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYGL 145
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+ K PKI +A ++ L EV+ V GDG ND PA A
Sbjct: 146 VG------VGKPDPKIFELA----------LEELGVKPEEVLMV-GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 2e-08
Identities = 117/486 (24%), Positives = 186/486 (38%), Gaps = 79/486 (16%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T +V + + + + D+ PG ++ L GD+VP DG G ++E+ LTGE P
Sbjct: 324 TARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-EAWLDEAMLTGEPIP-QQ 381
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ +GT VQ+GS + VG T +++ + + Q + +
Sbjct: 382 KGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA-------QSSKPEIGQLAD 434
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
KI F V + L W + G A +I+ IA T++++A P L L
Sbjct: 435 KISAVFVPVVVVI--------ALVSAAIWYFFG-PAPQIVYTLVIATTVLIIACPCALGL 485
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
A +S+ + + LVR A + + ++ DKTGTLT V+ +
Sbjct: 486 ATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVD 545
Query: 479 EVDNSKGTPAF--GSSIP---ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 533
E + A GSS P A K ++ G + G G E G
Sbjct: 546 EAQALRLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHA------ 599
Query: 534 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 593
LLLG Q +E + + +GA+ ++LA
Sbjct: 600 ---LLLGNQALLNEQQVDTKALEAEITAQAS----------------QGATPVLLAV--- 637
Query: 594 FLNSNGEVV-------PLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFSADAPIP 645
+G+ PL +V L ++ R + M G N +A+A I
Sbjct: 638 ----DGKAAALLAIRDPLRSDSVAAL----QRLHKAGYRLV----MLTGDNPTTANA-IA 684
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNG 704
E I G+ + G E++ +S G V MV GD IN A A+A+ + GI G
Sbjct: 685 KEAGIDEVIAGV---LPDGKAEAIKRLQSQGRQVAMV-GDGINDAPALAQADVGIAMGGG 740
Query: 705 --IAIE 708
+AIE
Sbjct: 741 SDVAIE 746
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 5e-08
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 206 IVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQ-VARNGFRRKISIYDLLPGDIVHL 264
++++++ F A ++ + Q L + + ++ + + ++G I DL G IV +
Sbjct: 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRV 131
Query: 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTT 322
G+Q+P DG + G + ++ES++TGES PV + F ++ GT V + ++ +T+
Sbjct: 132 ATGEQIPNDGKVIKGLAT-VDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITS 190
Query: 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQ 382
+ K++ + +TP ++ L T++ + + F VV + F
Sbjct: 191 EPGHSFLDKMIGLVEGATRKKTPNEIAL---FTLLMTLTIIFLVVILTMYPLAKF----- 242
Query: 383 EGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442
++ L I A+AV ++ + GL A+ ++ M ++ L +
Sbjct: 243 --LNFN------LSIAMLIALAVCLIPTTI-GGLLSAIGIA---GMDRVTQFNILAKSGR 290
Query: 443 ACETMGSATSICSDKTGTLT 462
+ ET G + DKTGT+T
Sbjct: 291 SVETCGDVNVLILDKTGTIT 310
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 3e-07
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296
R+G R +++I DL PGD++ + G ++PADG +S F+ +ES+LTGES PV
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASF-DESALTGESIPV 300
|
Length = 741 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 5e-07
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+E + E+L T + G+S+ E RR E YG N+ + H+ + IL
Sbjct: 9 LEEVLERLQTDLEKGLSSEE--AARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILL 66
Query: 181 VCALVSLV 188
A++S +
Sbjct: 67 AAAVLSAL 74
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 4e-05
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
PGVKE++ + GI + + T + + E G+ I +E
Sbjct: 27 PGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLF 86
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL-HEADIGLAM 775
L + + +P +K L EV+ V GD ND +G+A+
Sbjct: 87 LGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 7e-05
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF-SVLINESSLTGESEPV 296
G ++ +L GDIV + G+ +PADG + G SV +ES++TGES PV
Sbjct: 112 PGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASV--DESAITGESAPV 162
|
Length = 679 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
+ PG +E VA ++AG V +++G + IA GI D +A E E D
Sbjct: 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI--DYVVANE----LEIDDG 129
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 774
+L+ + L + L E VA GD ND P L A + +A
Sbjct: 130 KLTGRVVGPICDGEGK---AKALRELAAELGIPLEETVAY-GDSANDLPMLEAAGLPIA 184
|
Length = 212 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.002
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 713 REKSDEELSKL--IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
R+ S +L++ IP +V A + P K +++ L+ E V + G+G ND AL EAD
Sbjct: 55 RKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREAD 113
Query: 771 IGL 773
+G+
Sbjct: 114 LGI 116
|
Length = 152 |
| >gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.0 bits (88), Expect = 0.003
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 14/88 (15%)
Query: 681 MVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP--KIQVMARSSPMDK 738
+V+G + +A+ GI N + E E KL K + R +
Sbjct: 46 IVSGSPEPLVRPVAKALGIDDVNVVGTE-LENVLVDGRLTGKLDGEGKAAALKRLA---- 100
Query: 739 HTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
+ VVAV GD +D PAL
Sbjct: 101 ------QKIGRYPVVAV-GDSISDLPAL 121
|
Length = 122 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 799 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.56 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 99.55 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.52 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.35 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.11 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.06 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.9 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.88 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.83 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.79 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.78 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.77 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.77 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.72 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.71 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.66 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.65 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.64 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.62 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.61 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.59 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.56 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.55 | |
| PLN02887 | 580 | hydrolase family protein | 98.52 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.48 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.4 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.38 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.38 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.37 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.31 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.24 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.2 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.2 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.18 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.17 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.11 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.09 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.96 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.91 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.9 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.89 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.8 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.78 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.75 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.73 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.71 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.52 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.48 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.45 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.44 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.4 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.35 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.33 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.33 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.31 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.25 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.12 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.06 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.05 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.92 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.89 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.85 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.84 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.81 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.81 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.66 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.63 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.59 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.52 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.49 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.44 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.36 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.34 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.29 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.28 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.25 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.21 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.16 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.15 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.13 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.05 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.04 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.89 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.87 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.86 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.82 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.78 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.77 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.64 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.37 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.36 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.29 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.23 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.21 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.17 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.15 | |
| PLN02811 | 220 | hydrolase | 95.05 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.03 | |
| PLN02940 | 382 | riboflavin kinase | 94.93 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.62 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.43 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.22 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.21 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.18 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.03 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.89 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 93.63 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.38 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.3 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.93 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 92.9 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.67 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 92.65 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.48 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.44 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 91.68 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.48 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 91.26 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 90.04 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 89.29 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 88.53 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 87.98 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 87.91 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 87.74 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 87.59 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 86.88 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 85.6 | |
| PLN02580 | 384 | trehalose-phosphatase | 85.34 | |
| PLN02423 | 245 | phosphomannomutase | 84.93 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 84.65 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 84.15 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 83.33 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 83.11 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 82.94 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 82.77 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 82.39 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 81.86 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 81.7 | |
| PLN03017 | 366 | trehalose-phosphatase | 81.13 | |
| PF00403 | 62 | HMA: Heavy-metal-associated domain; InterPro: IPR0 | 80.95 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-178 Score=1457.78 Aligned_cols=772 Identities=59% Similarity=0.879 Sum_probs=725.8
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhhcccccccccccccccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC
Q 003740 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS 83 (799)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (799)
++.++|. .+.+|++.++++|||.|. .++|++|||||..++++..+....|+ +.|+...+.+|+..|.++. +.+
T Consensus 2 ~~~~~~~-~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~-~~~ 74 (1034)
T KOG0204|consen 2 LLDKDFV-VSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAG-SRT 74 (1034)
T ss_pred Ccccccc-cccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhccc-ccc
Confidence 4566776 788899999999999888 99999999999999988886555554 8899999999999998873 222
Q ss_pred ccccccccccCCcccChhhhhhhhccCChHHHHhhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccH
Q 003740 84 EYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGF 163 (799)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f 163 (799)
++.+ +++++++.++++.++.+.|+.+||++|||+.|+||+..||+.+++++.+|++.||+|.+|++++++|
T Consensus 75 e~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F 145 (1034)
T KOG0204|consen 75 EYTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF 145 (1034)
T ss_pred cccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH
Confidence 2211 7888999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEE
Q 003740 164 WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243 (799)
Q Consensus 164 ~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~ 243 (799)
|+++|++++|.+++||++||++|+.+++++++++++||||++|+++++++++++|+++|+|++||++|+++..+.++.|+
T Consensus 146 l~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~Vi 225 (1034)
T KOG0204|consen 146 LRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVI 225 (1034)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCC-CCCEEEccceeeeceEEEEEEE
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTT 322 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~-~~~~v~sGt~v~~G~~~~~V~~ 322 (799)
|||++++|++.|||||||++|+.||++||||++++|++|.+|||+|||||++++|+. .+||++|||++++|+++|+||+
T Consensus 226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa 305 (1034)
T KOG0204|consen 226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA 305 (1034)
T ss_pred ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 8999999999999999999999
Q ss_pred EcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCc--cccCCcchHHHHHH
Q 003740 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEF 400 (799)
Q Consensus 323 vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 400 (799)
||+||+||++|..+.+..+++||||.+|+++|..|+++++++|+++|+++++||+......+.. +.|.......++++
T Consensus 306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999887665543 56666667889999
Q ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeee
Q 003740 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480 (799)
Q Consensus 401 ~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 480 (799)
|.++++++|||+|||||||||++|||+++||+++++|||+++||||||++++||+|||||||+|+|+|++.|++++.+..
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC--ceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecC
Q 003740 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (799)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F 558 (799)
+... .+.+++.+.+++.++++.|+++++..++.+ .++++|+|||+|||.|+..+|++++..|.+.++++++||
T Consensus 466 ~~~~-----~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSPK-----SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred cCcc-----cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 3321 257899999999999999999999987765 889999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEeCCCc-EEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC
Q 003740 559 NSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (799)
Q Consensus 559 ~s~~k~~~vv~~~~~~~-~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~ 637 (799)
||.||+|+++++.++++ | +|||||+|+||++|++|++.+|+..+++++.+..+++.|+.||++|+||+|+|||++...
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 99999999999988877 6 999999999999999999999999999999999999999999999999999999996543
Q ss_pred ----CC-CCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeecch
Q 003740 638 ----FS-ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP 710 (799)
Q Consensus 638 ----~~-~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~--~~~~g~ 710 (799)
++ +.+..++.+++++|++||+||+||||++||+.||+|||+|+|+||||..||+|||.+|||+++++ .+++|+
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 22 22357789999999999999999999999999999999999999999999999999999999988 999999
Q ss_pred hhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-
Q 003740 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF- 789 (799)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi- 789 (799)
+|++++++++++++|+++|+||+||.||+.+|+.|+++ ||+||+||||+||+||||+||||+||||+|||||||+|||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeE
Confidence 99999999999999999999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred ----ChHhHHHhh
Q 003740 790 ----NFSSRKTYI 798 (799)
Q Consensus 790 ----nf~si~~~i 798 (799)
||+|||+++
T Consensus 779 i~DDNFssIVk~v 791 (1034)
T KOG0204|consen 779 ILDDNFSSIVKAV 791 (1034)
T ss_pred EEcCchHHHHHHH
Confidence 999999986
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-126 Score=1051.98 Aligned_cols=660 Identities=35% Similarity=0.532 Sum_probs=575.4
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (799)
..++..+..|.|++..||+.++ +.+|++.||+|+++...++|+|+.+++||.++.+.+|+++|++|++++.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------- 77 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------- 77 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh-------
Confidence 4588899999999999999987 9999999999999999999999999999999999999999999999874
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~ 278 (799)
|-|+++|.+++++++.+..+++|+.++..+.|.+ +.+..++|+|+|+.+.++++||||||||.|+.||+||||.++++
T Consensus 78 -~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~-l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 78 -FDEPFVITLIIVINVTVGFVQEYNAEKALEALKE-LVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHh-cCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 4578899999999999999999999999999997 55669999999999999999999999999999999999999999
Q ss_pred eceeEEecccccCCCCccccC-------------CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCCh
Q 003740 279 GFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (799)
Q Consensus 279 g~~l~vDeS~lTGEs~pv~k~-------------~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 345 (799)
..++.+|||+|||||.|+.|. ...+++|+||.|..|.++++|++||.+|++|+|...+++.++++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 999999999999999999994 2346899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Q 003740 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (799)
Q Consensus 346 lq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~ 425 (799)
||+++|.+...+..+..++++.++++- +++|.. ..++ +..+..+..+|.+++++.|.|+|||||..+|++|+
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~-p~~~------g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLN-IGHFLD-PVHG------GSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhh-hhhhcc-cccc------ccchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 999999999999876655555444331 122221 0111 11223577899999999999999999999999999
Q ss_pred HHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeec------CCCC-------CCC---C
Q 003740 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------NSKG-------TPA---F 489 (799)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~-------~~~---~ 489 (799)
.+.+||+|++++||++.++||||.+++||+|||||||+|+|++.++|+.+...... .... .+. .
T Consensus 308 LG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 308 LGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccc
Confidence 99999999999999999999999999999999999999999999999986543211 0000 000 0
Q ss_pred CCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHH---------------HhhhcceEE
Q 003740 490 GSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA---------------ERQASKIVK 554 (799)
Q Consensus 490 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~---------------~~~~~~i~~ 554 (799)
......+.+.-+.+..++|+.+.+..+..+.++..|.|||.||..++.++++.-.. ..+.++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~ 467 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIA 467 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhee
Confidence 11223344555556666666777776654666779999999999999998875322 233456678
Q ss_pred EecCCCCCceEEEEEEeCCC--cEEEEEcCchHHHHHhcccccccCC-eEeeCCHHHHHHHHHHHHHHHHhccceeeEEE
Q 003740 555 VEPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631 (799)
Q Consensus 555 ~~~F~s~~k~~~vv~~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~ 631 (799)
.+||+|+||+|+|.+..+.+ ++.+|+|||+|.||++|++++..+| ...||++..|+.+.+...+|+++|+||+++|+
T Consensus 468 elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~ 547 (972)
T KOG0202|consen 468 ELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALAS 547 (972)
T ss_pred EeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEc
Confidence 99999999999999985544 5899999999999999998887776 55999999999999999999999999999999
Q ss_pred EEcCCC--------CCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 003740 632 MEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (799)
Q Consensus 632 ~~~~~~--------~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~ 703 (799)
++.+.. .+..+...|.+|+|+|++|+.||||++++++|+.|+++||+|+|+||||..||.+||+++||...+
T Consensus 548 ~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 548 KDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED 627 (972)
T ss_pred cCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC
Confidence 987741 122345668999999999999999999999999999999999999999999999999999999876
Q ss_pred c----eeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCC
Q 003740 704 G----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (799)
Q Consensus 704 ~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~g 779 (799)
. .+++|++|+.++++++.+...+..||||++|++|.++|+.||++ |++|||||||+|||||||.||||||||++|
T Consensus 628 ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~G 706 (972)
T KOG0202|consen 628 EDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISG 706 (972)
T ss_pred ccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCc
Confidence 6 89999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred CHHHHHhcCC-----ChHhHHHhh
Q 003740 780 TEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 780 tevak~aaDi-----nf~si~~~i 798 (799)
|||||||||+ ||+||+.++
T Consensus 707 TdVaKeAsDMVL~DDnFstIvaAV 730 (972)
T KOG0202|consen 707 TDVAKEASDMVLADDNFSTIVAAV 730 (972)
T ss_pred cHhhHhhhhcEEecCcHHHHHHHH
Confidence 9999999999 999999986
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-120 Score=1100.07 Aligned_cols=696 Identities=50% Similarity=0.768 Sum_probs=610.0
Q ss_pred ccCCcccChhhhhhhhcc-CChHHHHhhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHH
Q 003740 92 AASGFQICPDELGSIVEG-HDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEA 170 (799)
Q Consensus 92 ~~~g~~~~~~~~~~~~~~-~~~~~l~~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~ 170 (799)
...||.+.-.++.++.+. ++.+.|+.+||++++++.|+++...||+.+++++.+|+++||+|+++.+++++||+.+|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~ 93 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAA 93 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 456899999999988865 4678889999999999999999999999444459999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHhhhc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeC
Q 003740 171 LHDMTLMILAVCALVSLVVGIA-----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245 (799)
Q Consensus 171 l~~~~~~il~i~a~is~~~~~~-----~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~ 245 (799)
|+++.+++|++++++++++++. .++....|++++.|+++++++++++++.+|+++++++++++..++..++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 9999999999999999998753 22344589999999999999999999999999999999987666779999999
Q ss_pred CeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCC-CCEEEccceeeeceEEEEEEEEc
Q 003740 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVG 324 (799)
Q Consensus 246 g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~-~~~v~sGt~v~~G~~~~~V~~vG 324 (799)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|.++++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 99999999999999999999999999999999997789999999999999999854 46899999999999999999999
Q ss_pred ccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHH
Q 003740 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (799)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 404 (799)
.+|++|+|++++.+++ +++|+|++++++++++.++++.+++++|+++++.++......+.. ........+...|..+
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 330 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIA 330 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHH
Confidence 9999999999998765 568999999999999999999999888888765544322111100 0001112577889999
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCC
Q 003740 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (799)
Q Consensus 405 v~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (799)
+++++++||||||+++|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..+.
T Consensus 331 l~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-- 408 (941)
T TIGR01517 331 VTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD-- 408 (941)
T ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999997665443221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce
Q 003740 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (799)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~ 564 (799)
.....++...+++..++++|+......++.+..+..|||+|.|+++++...+.+....+..+++++.+||+|++|+
T Consensus 409 ----~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 409 ----VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred ----ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCe
Confidence 1111234455667677777765543322233446789999999999998888877777777888999999999999
Q ss_pred EEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCC
Q 003740 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (799)
Q Consensus 565 ~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~ 644 (799)
|+++++.+++.+++++||+||.+++.|+.++..+|...++++ .++.+.+.+++|+++|+|++++|||+++.+.......
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~ 563 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 563 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 999999877779999999999999999988777888888887 7788999999999999999999999986543222234
Q ss_pred CCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 645 ~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
.+.+++|+|+++|+||+||+++++|+.|+++||+|+|+||||+.||.+||++|||.+++..+++|+++++++++++.+.+
T Consensus 564 ~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i 643 (941)
T TIGR01517 564 PNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPIL 643 (941)
T ss_pred cccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+++.||||++|+||+++|+.||++ |++|+|||||+||+||||+||||||||++|||+||++||+ ||++|+++|
T Consensus 644 ~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 644 PKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999 999999987
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-114 Score=1054.38 Aligned_cols=648 Identities=29% Similarity=0.411 Sum_probs=555.8
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (799)
..++.+++.|+++...||+.++ +.+|++.||+|+++.++.+++|+.++++|+++++++|+++++++++++
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-------- 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-------- 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------
Confidence 4678899999999989999977 999999999999999999999999999999999999999999999875
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~ 278 (799)
.|++++.|++.+++..+++.+++|+.++..++|.+.. +.+++|+|||++++|+++||||||||.|++||+|||||+|++
T Consensus 80 ~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~-~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~ 158 (1053)
T TIGR01523 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLA-SPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE 158 (1053)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence 6899999999999999999999999999999999754 558999999999999999999999999999999999999999
Q ss_pred eceeEEecccccCCCCccccCCC--------------CCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCC---
Q 003740 279 GFSVLINESSLTGESEPVNVNAL--------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD--- 341 (799)
Q Consensus 279 g~~l~vDeS~lTGEs~pv~k~~~--------------~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~--- 341 (799)
+++|.||||+|||||.||.|... .+++|+||.|.+|.++++|++||.+|++|+|.+++.+...
T Consensus 159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~ 238 (1053)
T TIGR01523 159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238 (1053)
T ss_pred eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence 99999999999999999999631 3579999999999999999999999999999998864321
Q ss_pred --------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccc
Q 003740 342 --------------------------------DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389 (799)
Q Consensus 342 --------------------------------~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~ 389 (799)
.+||||+++++++.++..+++++++++|++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------- 304 (1053)
T TIGR01523 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------- 304 (1053)
T ss_pred cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Confidence 2499999999999999888888777766542110
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEE
Q 003740 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (799)
Q Consensus 390 ~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (799)
.+...+..+++++|+++|+|||+.+++++++++++|+++|++||+++++|+||++|+||+|||||||+|+|+|.
T Consensus 305 ------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 ------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred ------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 11345667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-eeeeecCC--CCCCC------------------------C-------------CCCCChhHHHHHHHHHHhcC
Q 003740 470 KACICE-EIKEVDNS--KGTPA------------------------F-------------GSSIPASASKLLLQSIFNNT 509 (799)
Q Consensus 470 ~~~~~~-~~~~~~~~--~~~~~------------------------~-------------~~~~~~~~~~~l~~~i~~~~ 509 (799)
++|..+ ..+..+.. ...+. . ......+....+....++|+
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 999864 22221110 00000 0 00000112232444555566
Q ss_pred CceEEec-CCCceEEcCCchHHHHHHHHHHcCCChH------HH-------------------hhhcceEEEecCCCCCc
Q 003740 510 GGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE-------------------RQASKIVKVEPFNSVKK 563 (799)
Q Consensus 510 ~~~~~~~-~~~~~~~~g~p~e~All~~~~~~g~~~~------~~-------------------~~~~~i~~~~~F~s~~k 563 (799)
.+.+..+ +++.+...|+|+|.||+.++.+.|.+.. .. +..+++++.+||+|+||
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 5665432 2334466899999999999988876421 11 23467899999999999
Q ss_pred eEEEEEEeCCC-cEEEEEcCchHHHHHhcccccccCC-eEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC-
Q 003740 564 QMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA- 640 (799)
Q Consensus 564 ~~~vv~~~~~~-~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~- 640 (799)
||+++++.+++ .+++|+|||||.|+++|+++...+| ...+++++.++.+.+.+++|+++|+||+++|||+++.+...
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 99999986544 4889999999999999998766554 56799999999999999999999999999999998653110
Q ss_pred --------CCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----------
Q 003740 641 --------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---------- 702 (799)
Q Consensus 641 --------~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~---------- 702 (799)
..+..|.|++|+|+++|+||+||+++++|+.|+++||+|+|+|||++.||.+||++|||.++
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 11345789999999999999999999999999999999999999999999999999999854
Q ss_pred CceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHH
Q 003740 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 703 ~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtev 782 (799)
...+++|++++.++++++.+...+..||||++|+||+++|+.||++ |++|+|||||+||+|||++||||||||++|+|+
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 3479999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHhcCC-----ChHhHHHhh
Q 003740 783 ELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 783 ak~aaDi-----nf~si~~~i 798 (799)
||++||+ ||++|+++|
T Consensus 778 ak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHH
Confidence 9999999 899999986
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-114 Score=1043.09 Aligned_cols=637 Identities=37% Similarity=0.541 Sum_probs=562.7
Q ss_pred HHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcch
Q 003740 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHD 202 (799)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d 202 (799)
.+...+.++...||+.++ +.+|+..||.|+++..+..++|..++.+|++++.++|+++++++++++.+..+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 566778888899999965 999999999999999999999999999999999999999999999988542110 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeecee
Q 003740 203 GLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (799)
Q Consensus 203 ~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l 282 (799)
...|...+++..++..+++|+.++..+++.+.. +..++|+|||++++|+++||||||||.|++||+||||+++++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 556666777777788888888888888888755 5699999999999999999999999999999999999999999989
Q ss_pred EEecccccCCCCccccC-------------CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHH
Q 003740 283 LINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVK 349 (799)
Q Consensus 283 ~vDeS~lTGEs~pv~k~-------------~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~ 349 (799)
.||||+|||||.|+.|. ..++++|+||.+.+|.+.++|++||.+|+.|++...+......+||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999996 34678999999999999999999999999999999999886677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Q 003740 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (799)
Q Consensus 350 l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~ 429 (799)
++++..++..+++++++++|++...+ . +. .+...|..++++++.++|+|||+.++++++.+..
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~~~---~----~~----------~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGLFR---G----GN----------GLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---c----Cc----------cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 99999999999998888887765211 0 00 1567899999999999999999999999999999
Q ss_pred HHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcC
Q 003740 430 KMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNT 509 (799)
Q Consensus 430 ~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 509 (799)
+|.+++++||+++++|+||++++||||||||||+|+|+|.+++..+...+.+ ......++... .+...+++|+
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~~~~~~~-~~l~~~~lc~ 400 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLKDSPALL-RFLLAAALCN 400 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccccchHHH-HHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985110000 00111112223 3345556666
Q ss_pred CceEEecCCCceEEcCCchHHHHHHHHHHcCC--ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHH
Q 003740 510 GGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEII 587 (799)
Q Consensus 510 ~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~--~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~i 587 (799)
+.....+ + ++..|||+|.||++++.+.|. +....+..+++++.+||+|+||||+++++.+++++.+++|||||.|
T Consensus 401 ~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~i 477 (917)
T COG0474 401 SVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVI 477 (917)
T ss_pred ccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHH
Confidence 6555544 3 677999999999999999988 7778888889999999999999999999976677999999999999
Q ss_pred HHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCC-CCCCCcceeeeeecccCCCcccHH
Q 003740 588 LAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVK 666 (799)
Q Consensus 588 l~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~-~~~~~~~~~lg~~~~~D~~R~~v~ 666 (799)
+++|+++ +...+++++.++.+++..++|+++|+|++++|||.++..+.... ...|.|++|+|+++|+||||+|++
T Consensus 478 l~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~ 553 (917)
T COG0474 478 LERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553 (917)
T ss_pred HHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHH
Confidence 9999987 77789999999999999999999999999999997765533211 467899999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~ 744 (799)
++|+.|++|||+|+|+||||+.||++||++|||..+. ..+++|.++..++++++.+.+.++.||||+||+||.++|+.
T Consensus 554 ~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~ 633 (917)
T COG0474 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEA 633 (917)
T ss_pred HHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999998876 45999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 745 Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
||++ |++|||||||+|||||||+||||||||++|||+||+|||| ||++|+.++
T Consensus 634 lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av 691 (917)
T COG0474 634 LQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAV 691 (917)
T ss_pred HHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHH
Confidence 9999 9999999999999999999999999999999999999999 999999886
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-112 Score=1018.02 Aligned_cols=615 Identities=25% Similarity=0.388 Sum_probs=539.3
Q ss_pred CHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCC
Q 003740 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (799)
Q Consensus 120 ~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (799)
..+.+.+.|+++. .||++++ +.+|++.||+|+++.++++++|+.+|++|++++.++++++++++++++ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5788888999987 6999877 999999999999999999999999999999999999999999998865 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeC------CeEEEEecCCCCcccEEEecCCCeeccc
Q 003740 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (799)
Q Consensus 200 ~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~i~~~~LvvGDiv~l~~Gd~vPaD 273 (799)
|++++.|++.+++..+++.+.+++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 788988888888888888888998888888888754 458999999 7899999999999999999999999999
Q ss_pred EEEEeeceeEEecccccCCCCccccCCCC------------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCC
Q 003740 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (799)
Q Consensus 274 g~ll~g~~l~vDeS~lTGEs~pv~k~~~~------------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 341 (799)
|+|++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|+++++|++||.+|++|+|.+++.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999997653 479999999999999999999999999999999999888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHH
Q 003740 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (799)
Q Consensus 342 ~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~ 421 (799)
+++|+|+.++++++++..+++++++++++++.+ . .+ ++...|.++++++|++|||+||+++|
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~----~~-----------~~~~~l~~alsv~V~~~Pe~LP~~vt 342 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---T----KG-----------DWWEAALFALSVAVGLTPEMLPMIVT 342 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---h----cC-----------CHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 899999999999999998888777766655321 1 00 25567889999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 003740 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (799)
Q Consensus 422 l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (799)
++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++.... . +..+++
T Consensus 343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~----------------~--~~~~ll 404 (902)
T PRK10517 343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG----------------K--TSERVL 404 (902)
T ss_pred HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC----------------C--CHHHHH
Confidence 9999999999999999999999999999999999999999999999987642110 0 011222
Q ss_pred HHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEc
Q 003740 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (799)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~K 581 (799)
...+.|+.. . ...+||+|.|++.++...+ .......++.+..+||+|.+|+|+++++..++.+.+++|
T Consensus 405 -~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~K 472 (902)
T PRK10517 405 -HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICK 472 (902)
T ss_pred -HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEe
Confidence 223333321 1 1168999999999986543 123345677889999999999999998876677889999
Q ss_pred CchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCC
Q 003740 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (799)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~ 661 (799)
|+||.++++|+++. .+|...+++++.++.+.+..+.|+++|+|++++|||+++.+........|.|++|+|+++|+||+
T Consensus 473 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~ 551 (902)
T PRK10517 473 GALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551 (902)
T ss_pred CchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcc
Confidence 99999999999875 45667899999999999999999999999999999988654321111236799999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~l 741 (799)
||+++++|++|+++||+|+|+||||+.||.+||++|||. ++.+++|++++.++++++.+.++++.||||++|+||.++
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999999995 357999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 742 V~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
|+.||++ |++|+|||||+||+||||+|||||||| +|||+||++||| ||++|+++|+
T Consensus 630 V~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 630 VTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred HHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 9999999 999999999999999999999999999 999999999999 9999999873
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-111 Score=1026.77 Aligned_cols=658 Identities=29% Similarity=0.422 Sum_probs=559.9
Q ss_pred hCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc---
Q 003740 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE--- 194 (799)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~--- 194 (799)
-..++++++.|+++...||++++ +.+|+++||+|+++.++.+++|+.++++|++++.+++++++++++++....+
T Consensus 19 ~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~ 96 (997)
T TIGR01106 19 KLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTE 96 (997)
T ss_pred hCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccC
Confidence 35688999999999999999977 9999999999999998999999999999999999999999999876543221
Q ss_pred --CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecc
Q 003740 195 --GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (799)
Q Consensus 195 --~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPa 272 (799)
.....|++++.+++.+++..++..+.+++.++..+++.+ ..+..++|+|||++++|+++||||||+|.|++||+|||
T Consensus 97 ~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 97 EEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112468888866666666555566666666666666655 34568999999999999999999999999999999999
Q ss_pred cEEEEeeceeEEecccccCCCCccccCCCC---------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCC
Q 003740 273 DGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (799)
Q Consensus 273 Dg~ll~g~~l~vDeS~lTGEs~pv~k~~~~---------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (799)
||++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|.+.++|++||.+|++|++.+++.+...++
T Consensus 176 D~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 255 (997)
T TIGR01106 176 DLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGK 255 (997)
T ss_pred eEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCC
Confidence 999999988999999999999999997543 47999999999999999999999999999999998888888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Q 003740 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (799)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~ 423 (799)
+|+|+++++++..+..+++++++++|+++++. + + .+...+.+++++++++|||+||++++++
T Consensus 256 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~--------~~~~~~~~~i~v~v~~iP~~L~~~v~i~ 317 (997)
T TIGR01106 256 TPIAIEIEHFIHIITGVAVFLGVSFFILSLIL--------G--Y--------TWLEAVIFLIGIIVANVPEGLLATVTVC 317 (997)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c--C--------CHHHHHHHHHHHHhhcCCccchHHHHHH
Confidence 99999999999999998888887776654321 0 0 2456778889999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHH
Q 003740 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (799)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (799)
+++++++|.++|++||+++++|+||++|+||||||||||+|+|+|.++|+.+..+..+.................+.+..
T Consensus 318 l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 397 (997)
T TIGR01106 318 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSR 397 (997)
T ss_pred HHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877665332110000000111123334555
Q ss_pred HHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC---CCcE
Q 003740 504 SIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGF 576 (799)
Q Consensus 504 ~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~---~~~~ 576 (799)
.+++|+++.+..+..+ +....|+|+|.||++++...+.+....+..+++++.+||+|+||+|+++++.. ++.+
T Consensus 398 ~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~ 477 (997)
T TIGR01106 398 IAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRH 477 (997)
T ss_pred HHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceE
Confidence 6677766665433222 23567999999999999877666777788899999999999999999887643 2468
Q ss_pred EEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC--------CCCCCCCc
Q 003740 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------DAPIPTEG 648 (799)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~--------~~~~~~~~ 648 (799)
++++|||||.|++.|++++ .+|+..+++++.++.+.+.+++|+++|+||+++|||+++.+... +.+..|.|
T Consensus 478 ~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~ 556 (997)
T TIGR01106 478 LLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDN 556 (997)
T ss_pred EEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccC
Confidence 8999999999999999876 57888999999999999999999999999999999998653110 01223789
Q ss_pred ceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------c
Q 003740 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------G 704 (799)
Q Consensus 649 ~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~------------------------~ 704 (799)
++|+|+++|+||+||+++++|++|+++||+|+|+|||+..||.++|+++||.+++ .
T Consensus 557 L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 636 (997)
T TIGR01106 557 LCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKA 636 (997)
T ss_pred cEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999997543 2
Q ss_pred eeecchhhhccCHHHHhhhcCCce--EEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHH
Q 003740 705 IAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 705 ~~~~g~~~~~~~~~~~~~~~~~~~--v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtev 782 (799)
.+++|++++.++++++.+.+++.. ||||++|+||+++|+.||+. |++|+|||||+||+|||++||||||||++|+|+
T Consensus 637 ~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v 715 (997)
T TIGR01106 637 CVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 715 (997)
T ss_pred eEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHH
Confidence 699999999999999999998764 99999999999999999999 999999999999999999999999999999999
Q ss_pred HHHhcCC-----ChHhHHHhh
Q 003740 783 ELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 783 ak~aaDi-----nf~si~~~i 798 (799)
||++||+ ||++|+++|
T Consensus 716 ak~aADivL~dd~f~~Iv~ai 736 (997)
T TIGR01106 716 SKQAADMILLDDNFASIVTGV 736 (997)
T ss_pred HHHhhceEEecCCHHHHHHHH
Confidence 9999999 899999986
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-111 Score=1011.54 Aligned_cols=622 Identities=26% Similarity=0.390 Sum_probs=540.7
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc---C
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---G 195 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~---~ 195 (799)
...+.++..|+++. .||+.++ +.+|+++||+|+++.++.+++|+.++++|++++.++|+++++++++++.+.. +
T Consensus 30 ~~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 30 NSLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 35777888899984 7999877 9999999999999999999999999999999999999999999999876431 2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeC------CeEEEEecCCCCcccEEEecCCCe
Q 003740 196 WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQ 269 (799)
Q Consensus 196 ~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~i~~~~LvvGDiv~l~~Gd~ 269 (799)
....|++++.|++.+++..++..+.+|+.++..++|.+.. +..++|+|| |++++|+++||||||+|.|++||+
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 2246899999988888998999999999999999988754 458999999 479999999999999999999999
Q ss_pred ecccEEEEeeceeEEecccccCCCCccccCC--C--------------------CCEEEccceeeeceEEEEEEEEcccc
Q 003740 270 VPADGLFVSGFSVLINESSLTGESEPVNVNA--L--------------------NPFLLSGTKVQNGSCKMLVTTVGMRT 327 (799)
Q Consensus 270 vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~--~--------------------~~~v~sGt~v~~G~~~~~V~~vG~~T 327 (799)
|||||++++|+++.||||+|||||.|+.|.. + ++.+|+||.|.+|+++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999989999999999999999974 1 25799999999999999999999999
Q ss_pred hhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHH
Q 003740 328 QWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTI 407 (799)
Q Consensus 328 ~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~i 407 (799)
++|+|.+++.+ ...++|+|++++++++++..+++.++.+++++.. +. .+ ++...|.+++++
T Consensus 266 ~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~----~~-----------~~~~~l~~aisl 326 (903)
T PRK15122 266 YFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT----KG-----------DWLEALLFALAV 326 (903)
T ss_pred HhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc----cC-----------CHHHHHHHHHHH
Confidence 99999999987 5567999999999999988877766655444321 11 00 356778899999
Q ss_pred HHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCC
Q 003740 408 VVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTP 487 (799)
Q Consensus 408 lvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 487 (799)
++++||||||+++|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 327 ~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~---------- 396 (903)
T PRK15122 327 AVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR---------- 396 (903)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC----------
Confidence 9999999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred CCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEE
Q 003740 488 AFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGV 567 (799)
Q Consensus 488 ~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~v 567 (799)
.+++. +..+ ++|+.. . ..++||+|.|+++++.+.+.. ..+..++.++.+||++.+|+|++
T Consensus 397 -----~~~~~---l~~a-~l~s~~--~-------~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~ 456 (903)
T PRK15122 397 -----KDERV---LQLA-WLNSFH--Q-------SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSV 456 (903)
T ss_pred -----ChHHH---HHHH-HHhCCC--C-------CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEE
Confidence 01122 2222 223211 1 127899999999999876543 23446778899999999999999
Q ss_pred EEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC--CCCCC
Q 003740 568 VIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--DAPIP 645 (799)
Q Consensus 568 v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~--~~~~~ 645 (799)
+++..++++.+++||+||.+++.|+++. .+|...+++++.++.+.+.++.|+++|+|++++|||+++.++.. .....
T Consensus 457 v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~ 535 (903)
T PRK15122 457 VVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTAD 535 (903)
T ss_pred EEEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccccccccc
Confidence 9887667788999999999999999775 46777899999999999999999999999999999988654211 11224
Q ss_pred CCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcC
Q 003740 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (799)
Q Consensus 646 ~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (799)
+.|++|+|+++|+||+|||++++|++|+++||+|+|+||||+.||.+||++|||.. +.+++|++++.++++++.+.++
T Consensus 536 e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~ 613 (903)
T PRK15122 536 ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVE 613 (903)
T ss_pred ccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhh
Confidence 67899999999999999999999999999999999999999999999999999953 4699999999999999999999
Q ss_pred CceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 726 ~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+..||||++|+||+++|+.||++ |++|||||||+|||||||+|||||||| +|||+||++||| ||++|++++
T Consensus 614 ~~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 614 ERTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred hCCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 99999999999999999999999 999999999999999999999999999 999999999999 999999987
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-111 Score=1008.81 Aligned_cols=615 Identities=27% Similarity=0.373 Sum_probs=539.0
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (799)
..+++++..|+++. .||++++ +.+|++.||+|+++.++.+++|+.++++|++++.++++++++++++++
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~-------- 86 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-------- 86 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------
Confidence 46888999999986 7999877 999999999999999988999999999999999999999999998774
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEe------CCeEEEEecCCCCcccEEEecCCCeecc
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R------~g~~~~i~~~~LvvGDiv~l~~Gd~vPa 272 (799)
.|++++.|++.+++..++..+.+++.++....|.+.. +..++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 5788988888888888888888988888888887744 45899999 9999999999999999999999999999
Q ss_pred cEEEEeeceeEEecccccCCCCccccCCCC------------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCC
Q 003740 273 DGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (799)
Q Consensus 273 Dg~ll~g~~l~vDeS~lTGEs~pv~k~~~~------------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (799)
||++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|+|.+++.+ .
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~ 244 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-R 244 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-C
Confidence 999999988999999999999999997653 479999999999999999999999999999999988 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHH
Q 003740 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (799)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav 420 (799)
..++|+|++++++++++.++++++++++|+++.+ . .+ ++...|.+++++++++||||||+++
T Consensus 245 ~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~~~~~~~~al~l~v~~iP~~Lp~~v 306 (867)
T TIGR01524 245 RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------DWLEAFLFALAVAVGLTPEMLPMIV 306 (867)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------CHHHHHHHHHHHHHHhCcchHHHHH
Confidence 6679999999999999999888888776655421 0 00 2457788999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 003740 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (799)
Q Consensus 421 ~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (799)
|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..... ...++
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~------------------~~~~~ 368 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE------------------TSERV 368 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC------------------CHHHH
Confidence 999999999999999999999999999999999999999999999999987532110 01122
Q ss_pred HHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEE
Q 003740 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580 (799)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~ 580 (799)
+.. .++|+.. . ..++||+|+|+++++.... ....+..++.++.+||+|++|+|+++++.+++.+++++
T Consensus 369 l~~-a~l~~~~--~-------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~ 436 (867)
T TIGR01524 369 LKM-AWLNSYF--Q-------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLIC 436 (867)
T ss_pred HHH-HHHhCCC--C-------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEE
Confidence 222 2333221 1 1257999999999986532 23345567888999999999999999876555678999
Q ss_pred cCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCC
Q 003740 581 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (799)
Q Consensus 581 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~ 660 (799)
||+||.+++.|+++. .+|...+++++.++.+.+.++.|+++|+|++++|||+++.++.......+.+++|+|+++|+||
T Consensus 437 KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp 515 (867)
T TIGR01524 437 KGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDP 515 (867)
T ss_pred eCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCC
Confidence 999999999999774 4677789999988999999999999999999999998865432111123678999999999999
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+|||++++|++|+++||+|+|+||||+.||.+||+++||.. +.+++|.++++++++++.+.++++.||||++|+||++
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999963 4689999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 741 lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
+|+.||++ |++|+|||||+||+|||++|||||||| +|||+||++||| ||++|+++|+
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHH
Confidence 99999999 999999999999999999999999999 999999999999 9999999873
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-109 Score=1003.36 Aligned_cols=633 Identities=33% Similarity=0.512 Sum_probs=552.9
Q ss_pred CCHHHHHHHhCCCccCCCC-ccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHH-hhHHHHHHHHHHHHHHHhhhcccCC
Q 003740 119 GGVEGIAEKLSTSITDGIS-TSEHLLNRRKEIYGINKFTESPARGFWVYVWEAL-HDMTLMILAVCALVSLVVGIATEGW 196 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~-~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l-~~~~~~il~i~a~is~~~~~~~~~~ 196 (799)
..++++++.|+++...||+ .++ +.+|++.||+|+++.++.+++|+.++++| +++++++++++++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 4689999999999999999 555 99999999999999999999999999999 9999999999999999876
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEE
Q 003740 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (799)
Q Consensus 197 ~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~l 276 (799)
.|++++.|+++++++++++.+.+|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 578998888888888899999999999988888874 45689999999999999999999999999999999999999
Q ss_pred EeeceeEEecccccCCCCccccCCCC-------------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCC
Q 003740 277 VSGFSVLINESSLTGESEPVNVNALN-------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (799)
Q Consensus 277 l~g~~l~vDeS~lTGEs~pv~k~~~~-------------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (799)
++|+++.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|+|.+++++....+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99987899999999999999997643 58999999999999999999999999999999999988889
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Q 003740 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (799)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~ 423 (799)
+|+|+.+++++.++++++++++++++++. ++. +. .+...+..++++++++||||||+++|++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~~----------~~~~~~~~~v~llv~aiP~~Lp~~vt~~ 297 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----GK----------DWLEMFTISVSLAVAAIPEGLPIIVTVT 297 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----cC----------CHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 99999999999999887766554444332 111 10 2567888999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeee-cCCCCC---------CCCCCCC
Q 003740 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV-DNSKGT---------PAFGSSI 493 (799)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~~~~---------~~~~~~~ 493 (799)
+++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+.. +..... .......
T Consensus 298 l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (884)
T TIGR01522 298 LALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFY 377 (884)
T ss_pred HHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccccccccc
Confidence 999999999999999999999999999999999999999999999999976543210 000000 0000111
Q ss_pred ChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC-
Q 003740 494 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 572 (799)
Q Consensus 494 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~- 572 (799)
++...+++.. .++|+++.+... ..+..|||+|+|+++++...|.+ ..+..++.++.+||+|.+|+|+++++..
T Consensus 378 ~~~~~~~l~~-~~l~~~~~~~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 378 TVAVSRILEA-GNLCNNAKFRNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred CHHHHHHHHH-HhhhCCCeecCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 2233344433 344444443322 12346899999999999877653 4455678899999999999999988753
Q ss_pred CCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceee
Q 003740 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (799)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~l 652 (799)
++++++++||+||.|+..|++++..+|...+++++.++.+.+.++.|+++|+|++++||++++ .+++|+
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~-----------~~l~~l 520 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK-----------GQLTFL 520 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC-----------CCeEEE
Confidence 457889999999999999999988788888999999999999999999999999999998752 579999
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar 732 (799)
|+++|+||+|||++++|+.|+++||+++|+|||++.||.++|++|||......+++|+++++++++++.+.+++..||||
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE
Confidence 99999999999999999999999999999999999999999999999887778999999999999999999999999999
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 733 ~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
++|+||..+|+.||++ |++|+|||||+||+|||++||||||||.+|+|+||++||+ ||++|++++
T Consensus 601 ~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 601 ASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred CCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999998899999999999 899999876
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-107 Score=962.70 Aligned_cols=577 Identities=27% Similarity=0.411 Sum_probs=504.6
Q ss_pred CCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHH
Q 003740 135 GISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214 (799)
Q Consensus 135 Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~ 214 (799)
||+.++ +.+|+++||+|+++. +.+++|+.++++|++++.++++++++++++++ .|++++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 788776 999999999999987 45677899999999999999999999999876 5888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCC
Q 003740 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (799)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~ 294 (799)
.+..+.+++.++..++|.+. .+.+++|+|||++++|+++||+|||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 88888888888888888764 45689999999999999999999999999999999999999999878999999999999
Q ss_pred ccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003740 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (799)
Q Consensus 295 pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~ 374 (799)
|+.|..++ .+|+||.|.+|+++++|++||.+|++|+|.+++.+.+..++|+|+.+++++.++.++.+++++++|+++..
T Consensus 149 PV~K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998876 59999999999999999999999999999999999888889999999999999999888888777765532
Q ss_pred HHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEe
Q 003740 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (799)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~ 454 (799)
.+ + . ++...+.+++++++++|||+||+++|++++.++++|+|+|++||+++++|+||++|+||
T Consensus 228 ~~-------~-------~---~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~ 290 (755)
T TIGR01647 228 GR-------G-------E---SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILC 290 (755)
T ss_pred Hc-------C-------C---CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEE
Confidence 10 0 0 35678889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHH
Q 003740 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (799)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (799)
||||||||+|+|+|.+++..+.. .+++ +++..+..++. +.++||+|+|+++
T Consensus 291 ~DKTGTLT~~~~~v~~~~~~~~~---------------~~~~--~~l~~a~~~~~------------~~~~~pi~~Ai~~ 341 (755)
T TIGR01647 291 SDKTGTLTLNKLSIDEILPFFNG---------------FDKD--DVLLYAALASR------------EEDQDAIDTAVLG 341 (755)
T ss_pred ecCCCccccCceEEEEEEecCCC---------------CCHH--HHHHHHHHhCC------------CCCCChHHHHHHH
Confidence 99999999999999998864321 0111 22322322221 1268999999999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC-CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHH
Q 003740 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (799)
Q Consensus 535 ~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (799)
++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++...++||+||.+++.|++. ++.++++.
T Consensus 342 ~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~ 406 (755)
T TIGR01647 342 SAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVE 406 (755)
T ss_pred HHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHH
Confidence 886532 23456778899999999999999887654 556678999999999999742 34556788
Q ss_pred HHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHH
Q 003740 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI 693 (799)
Q Consensus 614 ~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~ai 693 (799)
+.+++|+.+|+|++++||++ .+.+++|+|+++|+||+|||++++|++|+++||+|+|+||||+.||++|
T Consensus 407 ~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 407 EKVDELASRGYRALGVARTD-----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred HHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 88999999999999999983 1368999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccC---CceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCC
Q 003740 694 ARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (799)
Q Consensus 694 A~~~GI~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~Ad 770 (799)
|++|||... ...+.+|.+.+.++++++.+.++++.||||++|+||+++|+.||++ |++|+|||||+||+|||++||
T Consensus 476 A~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~Ad 554 (755)
T TIGR01647 476 ARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKAD 554 (755)
T ss_pred HHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCC
Confidence 999999753 2234455666788999999999999999999999999999999999 999999999999999999999
Q ss_pred eeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 771 IGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 771 VGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|||||| +|||+||++||| ||++|+++|
T Consensus 555 VGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai 586 (755)
T TIGR01647 555 VGIAVA-GATDAARSAADIVLTEPGLSVIVDAI 586 (755)
T ss_pred eeEEec-CCcHHHHHhCCEEEEcCChHHHHHHH
Confidence 999999 999999999999 999999987
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-103 Score=953.63 Aligned_cols=620 Identities=33% Similarity=0.468 Sum_probs=529.2
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhcccCC--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEe
Q 003740 167 VWEALHDMTLMILAVCALVSLVVGIATEGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244 (799)
Q Consensus 167 ~~~~l~~~~~~il~i~a~is~~~~~~~~~~--~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R 244 (799)
++++|+++.+++|++++++|+++++..++. ...|++++.|++.+++..+++.+.+++.++..++|.+ ..+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEE
Confidence 478999999999999999999998765332 2479999999999999999999999999999999887 4566899999
Q ss_pred CCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCC------------CCEEEccceee
Q 003740 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQ 312 (799)
Q Consensus 245 ~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~------------~~~v~sGt~v~ 312 (799)
||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.++ ++++|+||.+.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999653 26899999999
Q ss_pred eceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCc
Q 003740 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD 392 (799)
Q Consensus 313 ~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~ 392 (799)
+|.++++|++||.+|++|+|.+++.+...++||+|+++++++.++.++.+++++++|++++.++... ..+ ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~--~~~------~~ 231 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP--ALG------GG 231 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc------ch
Confidence 9999999999999999999999999988889999999999999999888888777776554322110 000 01
Q ss_pred chHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEE
Q 003740 393 DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472 (799)
Q Consensus 393 ~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 472 (799)
....+..++..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 232 ~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 232 WIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred hHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 11245667778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCee------eeecCCCCCCCC---C-----CCCChhHHHHHHHHHHhcCCceEEecC-CCceEEcCCchHHHHHHHHH
Q 003740 473 ICEEI------KEVDNSKGTPAF---G-----SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGL 537 (799)
Q Consensus 473 ~~~~~------~~~~~~~~~~~~---~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~~~ 537 (799)
..+.. +...+....+.. . ..........+....++|+++.+..++ ++..+..|+|+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 86532 111111100000 0 000122344455666777777665432 22344579999999999998
Q ss_pred HcCCChHH----------------HhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeE
Q 003740 538 LLGGDFQA----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601 (799)
Q Consensus 538 ~~g~~~~~----------------~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 601 (799)
+.|.+... .+..+++++.+||+|+||||+++++.+ +++.+|+|||||.|++.|++++..+|..
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCe
Confidence 88765432 345677999999999999999999864 5688999999999999999988877888
Q ss_pred eeCCHHHHHHHHHHHHHHHH-hccceeeEEEEEcCCCCC-------CCCCCCCCcceeeeeecccCCCcccHHHHHHHHH
Q 003740 602 VPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (799)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~a~-~g~r~l~~a~~~~~~~~~-------~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~ 673 (799)
.|++++.++++.+.+++|++ +|+||+++|||+++.+.. ...+..|.+++|+|+++|+||+||+++++|+.|+
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~ 550 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH
Confidence 99999999999999999999 999999999999865311 1113457899999999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC
Q 003740 674 SAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (799)
Q Consensus 674 ~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~ 749 (799)
++||+++|+|||+..||.++|+++||..++. .+++|+++..++++++.+..++..||||++|+||.++|+.||+.
T Consensus 551 ~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~- 629 (917)
T TIGR01116 551 TAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ- 629 (917)
T ss_pred HCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999986543 57899999999999999999999999999999999999999988
Q ss_pred CCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 750 G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|++|+|+|||+||+|||++|||||||| +|+|+||++||+ ||++|++++
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 999999999999999999999999999 999999999999 699999876
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-101 Score=943.84 Aligned_cols=608 Identities=24% Similarity=0.350 Sum_probs=486.8
Q ss_pred cCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHH
Q 003740 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (799)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~ill 212 (799)
..||+.++ +.+|++.||.|.++.+ .++||+.+++++.+|+.+++++++++++.. +.|++++.+++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHH
Confidence 46998876 9999999999999875 589999999999999988888776665432 257888877776666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEec--CCCeecccEEEEeeceeEEeccccc
Q 003740 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLINESSLT 290 (799)
Q Consensus 213 v~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~--~Gd~vPaDg~ll~g~~l~vDeS~lT 290 (799)
..+++...+++..++.+++. ..+..++|+|||++++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 55555544444444333332 2356899999999999999999999999999 999999999999995 799999999
Q ss_pred CCCCccccCCC-----------------CCEEEccceeee-------ceEEEEEEEEcccchhHHHHHhhcCCCCCCChh
Q 003740 291 GESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (799)
Q Consensus 291 GEs~pv~k~~~-----------------~~~v~sGt~v~~-------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 346 (799)
|||.|+.|.+. .+++|+||.|.+ |.+.++|++||.+|..|++.+++......++|+
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999641 247999999985 789999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Q 003740 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (799)
Q Consensus 347 q~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~ 426 (799)
++.+.++...+. +++++.++++++..+. .+. ++...+..++++++++|||+||+++++++++
T Consensus 363 ~~~~~~~~~~l~----~~a~i~~i~~~~~~~~----~~~----------~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~ 424 (1054)
T TIGR01657 363 YKDSFKFILFLA----VLALIGFIYTIIELIK----DGR----------PLGKIILRSLDIITIVVPPALPAELSIGINN 424 (1054)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHH----cCC----------cHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 888766655443 3333333332222111 111 3567888999999999999999999999999
Q ss_pred HHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 003740 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (799)
Q Consensus 427 ~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (799)
++++|+++|++||++.++|++|++|+||||||||||+|+|+|.+++..+........ .... .......+...++
T Consensus 425 ~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~a 498 (1054)
T TIGR01657 425 SLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI--VTED----SSLKPSITHKALA 498 (1054)
T ss_pred HHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc--cccc----cccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999875432110000 0000 0011223345566
Q ss_pred hcCCceEEecCCCceEEcCCchHHHHHHHHHHc-CC--C--hHH----------HhhhcceEEEecCCCCCceEEEEEEe
Q 003740 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-GG--D--FQA----------ERQASKIVKVEPFNSVKKQMGVVIEL 571 (799)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~-g~--~--~~~----------~~~~~~i~~~~~F~s~~k~~~vv~~~ 571 (799)
.|++..... + +..|||+|.|+++++... .. + ... ....+++++.+||+|++|||+++++.
T Consensus 499 ~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~ 573 (1054)
T TIGR01657 499 TCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVST 573 (1054)
T ss_pred hCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEE
Confidence 676554321 2 568999999999986311 10 0 000 02457889999999999999999987
Q ss_pred CC-CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCC-----CCCCCCC
Q 003740 572 PE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (799)
Q Consensus 572 ~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~-----~~~~~~~ 645 (799)
++ +.+++++|||||.|+++|+.. ..++.+.+.++.|+.+|+||+++|||+++... ..+++..
T Consensus 574 ~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~ 641 (1054)
T TIGR01657 574 NDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV 641 (1054)
T ss_pred cCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHH
Confidence 55 457899999999999999841 12356788899999999999999999987421 1123456
Q ss_pred CCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----------------------
Q 003740 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN---------------------- 703 (799)
Q Consensus 646 ~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~---------------------- 703 (799)
|.|++|+|+++|+||+||+++++|+.|+++||+|+|+||||+.||.+||++|||.+++
T Consensus 642 E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~ 721 (1054)
T TIGR01657 642 ESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFE 721 (1054)
T ss_pred hcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEE
Confidence 8899999999999999999999999999999999999999999999999999997543
Q ss_pred -------------------------------ceeecchhhhc---cCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC
Q 003740 704 -------------------------------GIAIEGPEFRE---KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (799)
Q Consensus 704 -------------------------------~~~~~g~~~~~---~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~ 749 (799)
..+++|++++. +.++++.+.++++.||||++|+||.++|+.||+.
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~- 800 (1054)
T TIGR01657 722 VIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL- 800 (1054)
T ss_pred ecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-
Confidence 14778888765 4667889999999999999999999999999999
Q ss_pred CCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 750 G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
|++|+|||||+||+||||+|||||||| + +|++ .|||+ ||++|+++|+
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~das-~AA~f~l~~~~~~~I~~~I~ 852 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLS-E-AEAS-VAAPFTSKLASISCVPNVIR 852 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeec-c-ccce-eecccccCCCcHHHHHHHHH
Confidence 999999999999999999999999998 4 3655 89999 9999999874
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-101 Score=850.76 Aligned_cols=655 Identities=32% Similarity=0.450 Sum_probs=560.6
Q ss_pred hhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccC-
Q 003740 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEG- 195 (799)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~- 195 (799)
+...++.|+++|.++..+||+... +.+++.+-|+|.+++|+..|-|..+.+++++...++++++|+++++.......
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 456799999999999999999987 89999999999999999999999999999999999999999888764442211
Q ss_pred ----CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcCceeEEEeCCeEEEEecCCCCcccEEEecCCC
Q 003740 196 ----WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (799)
Q Consensus 196 ----~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~---~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd 268 (799)
.....|-+. .+..+++++.+-.|.|+.+-.+... .+.|..++|+|||+.+.+...||||||+|.++-||
T Consensus 118 ~~~~~~~nly~gi----iL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGI----VLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGD 193 (1019)
T ss_pred CCCCCCcceEEEE----EEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCC
Confidence 112333332 2223334444555666555444333 35577999999999999999999999999999999
Q ss_pred eecccEEEEeeceeEEecccccCCCCccccCC---------CCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCC
Q 003740 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (799)
Q Consensus 269 ~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~---------~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (799)
+||||.+++++..+++|+|+|||||+|.+.++ ..++-|.+|.+++|.++++|.+||.+|.+|+|..+...-
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~ 273 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGL 273 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccC
Confidence 99999999999999999999999999999852 245689999999999999999999999999999998888
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHH
Q 003740 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (799)
Q Consensus 340 ~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lpla 419 (799)
...++|++..++++..++..+++++++..|++.++. +. .++.++.+.+.++|..+|+|||..
T Consensus 274 ~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------gy----------~~l~avv~~i~iivAnvPeGL~~t 335 (1019)
T KOG0203|consen 274 EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------GY----------EWLRAVVFLIGIIVANVPEGLLAT 335 (1019)
T ss_pred CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------cc----------hhHHHhhhhheeEEecCcCCccce
Confidence 888999999999999999998888888777554321 10 466777778899999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 003740 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (799)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (799)
+|..++...++|++++++||++.+.|++|+.++||+|||||||+|+|+|.++|.++.....+...+.........+....
T Consensus 336 vTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~ 415 (1019)
T KOG0203|consen 336 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFI 415 (1019)
T ss_pred ehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999998876544322222222222334555
Q ss_pred HHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC--
Q 003740 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-- 573 (799)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~-- 573 (799)
.+...+.+|+.+.+..++.+ +....|++.|.||++|+...-.+....|..++.+...||||.+|+.-.+.+..+
T Consensus 416 ~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~ 495 (1019)
T KOG0203|consen 416 ALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS 495 (1019)
T ss_pred HHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC
Confidence 66678888888888876654 446689999999999998776677889999999999999999999888877554
Q ss_pred -CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCC--------CCCCCC
Q 003740 574 -GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF--------SADAPI 644 (799)
Q Consensus 574 -~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~--------~~~~~~ 644 (799)
..+.+.+|||||.++++|+.++ .+|+..|++++.++.++.....+...|.|+++|+++.++++. ....+.
T Consensus 496 ~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~ 574 (1019)
T KOG0203|consen 496 DPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNF 574 (1019)
T ss_pred CccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCC
Confidence 4577889999999999999876 478889999999999999999999999999999999887541 223356
Q ss_pred CCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--------------------
Q 003740 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------------- 704 (799)
Q Consensus 645 ~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~-------------------- 704 (799)
+..++.|+|++.+-||||+.+++||..||.|||+|+|+|||++.||+|||+..||..+++
T Consensus 575 p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~ 654 (1019)
T KOG0203|consen 575 PTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSR 654 (1019)
T ss_pred cchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcc
Confidence 778999999999999999999999999999999999999999999999999999886432
Q ss_pred ----eeecchhhhccCHHHHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCC
Q 003740 705 ----IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (799)
Q Consensus 705 ----~~~~g~~~~~~~~~~~~~~~~~~--~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~ 778 (799)
.|++|.++.+++++++++++.+. .||||.||+||+.||+.+|++ |.+|++||||+||+||||.||||||||++
T Consensus 655 ~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 655 DAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIA 733 (1019)
T ss_pred ccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccc
Confidence 78999999999999999998432 399999999999999999999 99999999999999999999999999999
Q ss_pred CCHHHHHhcCC-----ChHhHHHh
Q 003740 779 GTEVELECCCF-----NFSSRKTY 797 (799)
Q Consensus 779 gtevak~aaDi-----nf~si~~~ 797 (799)
|+|++|+|||+ ||+|||+-
T Consensus 734 GSDvsKqAADmILLDDNFASIVtG 757 (1019)
T KOG0203|consen 734 GSDVSKQAADMILLDDNFASIVTG 757 (1019)
T ss_pred cchHHHhhcceEEecCcchhheee
Confidence 99999999999 99999964
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-94 Score=827.20 Aligned_cols=516 Identities=25% Similarity=0.332 Sum_probs=424.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhccc---C---CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEE
Q 003740 169 EALHDMTLMILAVCALVSLVVGIATE---G---WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQV 242 (799)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~~---~---~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V 242 (799)
.+|+++.++++++++++++++++... + +..+|..++.+++.+++..++++..+++.+++++.|.+..++..++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 46789999999999999999886432 1 11234444444555555556666777777788888887655557999
Q ss_pred EeCCe-EEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCC--CEEEccceeeeceEEEE
Q 003740 243 ARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN--PFLLSGTKVQNGSCKML 319 (799)
Q Consensus 243 ~R~g~-~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~--~~v~sGt~v~~G~~~~~ 319 (799)
+|||+ +++|++++|++||+|.|++||+|||||++++|. ..||||+|||||.|+.|..++ +.+|+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99887 899999999999999999999999999999997 599999999999999998764 35999999999999999
Q ss_pred EEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHH
Q 003740 320 VTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 399 (799)
Q Consensus 320 V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (799)
|+++|.+|++|+|++++++++.++||+|..++.+...+..+.+++++..+. +.++. + . . .
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~-----g-------~---~--~ 247 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYS-----G-------G---A--L 247 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHh-----C-------c---h--H
Confidence 999999999999999999999999999988887766655433322221111 11110 1 0 1 1
Q ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeee
Q 003740 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479 (799)
Q Consensus 400 ~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 479 (799)
.+.++++++|++|||+|+.++|++...++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-- 325 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-- 325 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--
Confidence 577889999999999999999999999999999999999999999999999999999999999999999988753221
Q ss_pred ecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHH-cCCChHHHhhhcceEEEecC
Q 003740 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPF 558 (799)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~-~g~~~~~~~~~~~i~~~~~F 558 (799)
++ ..++ ...+.++.+ +.||.++|+++++.. .+.+.. +..++..+.+||
T Consensus 326 --------------~~--~~ll-~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~pF 374 (679)
T PRK01122 326 --------------TE--EELA-DAAQLSSLA------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVPF 374 (679)
T ss_pred --------------CH--HHHH-HHHHHhcCC------------CCCchHHHHHHHHHhhcCCCch--hhccccceeEee
Confidence 11 1222 333333221 458999999999876 343321 222456778999
Q ss_pred CCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCC
Q 003740 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (799)
Q Consensus 559 ~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~ 638 (799)
++.+++|++.+. + +.++||++|.+++.|.. +|... .+++.+.++.++++|+|++++|+
T Consensus 375 ~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------- 432 (679)
T PRK01122 375 SAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------- 432 (679)
T ss_pred cCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE-------
Confidence 999998887542 2 57899999999999963 22221 24567778899999999999983
Q ss_pred CCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHH
Q 003740 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (799)
Q Consensus 639 ~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~ 718 (799)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++|||.+
T Consensus 433 ---------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------- 486 (679)
T PRK01122 433 ---------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------- 486 (679)
T ss_pred ---------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------
Confidence 578999999999999999999999999999999999999999999999999964
Q ss_pred HHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHh
Q 003740 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSS 793 (799)
Q Consensus 719 ~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~s 793 (799)
++||++|+||+++|+.+|++ |++|+|||||+||+|||++|||||||| +|||+||||||| ||++
T Consensus 487 ----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~ 554 (679)
T PRK01122 487 ----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTK 554 (679)
T ss_pred ----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999 9999
Q ss_pred HHHhh
Q 003740 794 RKTYI 798 (799)
Q Consensus 794 i~~~i 798 (799)
|++++
T Consensus 555 Iv~av 559 (679)
T PRK01122 555 LIEVV 559 (679)
T ss_pred HHHHH
Confidence 99986
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-92 Score=814.42 Aligned_cols=512 Identities=24% Similarity=0.345 Sum_probs=410.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhccc--CCC-CCcchhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcCceeE
Q 003740 169 EALHDMTLMILAVCALVSLVVGIATE--GWP-KGAHDGLGIVMSILLVVFVTATSD----YKQSLQFKDLDREKKKITVQ 241 (799)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~~--~~~-~~~~d~~~i~~~illv~~~~~~~~----~~~~~~~~~l~~~~~~~~v~ 241 (799)
..+++|..++++++++++++++.+.+ +.. ..+++++.|++.+++..++..+.+ ++.+++.+.|.+..++.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 35678899999999999999887633 111 123566667666666666666653 44444455565544444665
Q ss_pred -EEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCC---CCEEEccceeeeceEE
Q 003740 242 -VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCK 317 (799)
Q Consensus 242 -V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~---~~~v~sGt~v~~G~~~ 317 (799)
|.|||++++|++++|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|+++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 6799999999999999999999999999999999999976 9999999999999999987 66 9999999999999
Q ss_pred EEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHH
Q 003740 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (799)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (799)
++|+++|.+|++|+|.+++++++.++||+|..+..+...+. +.++++++++..+. . +. .+
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~--~--------~~-----~~ 245 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLA--K--------FL-----NF 245 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHH--h--------hc-----cH
Confidence 99999999999999999999999899999977655433322 22222222211110 0 00 12
Q ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCee
Q 003740 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (799)
Q Consensus 398 ~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (799)
...+.++++++|++|||+||.++|++++.++++|.++|+++|+++++|+||++|+||||||||||+|++.++++...+..
T Consensus 246 ~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~ 325 (673)
T PRK14010 246 NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSS 325 (673)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCc
Confidence 23566788888899999999999999999999999999999999999999999999999999999988777765432110
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEec
Q 003740 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (799)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~ 557 (799)
...+++..+. .|+.. +.||+++|+++++.+.+.+.... ..+.+|
T Consensus 326 ------------------~~~~ll~~a~-~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~p 369 (673)
T PRK14010 326 ------------------SFERLVKAAY-ESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIP 369 (673)
T ss_pred ------------------cHHHHHHHHH-HhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceec
Confidence 1122332222 22211 45999999999998776553321 123589
Q ss_pred CCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC
Q 003740 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (799)
Q Consensus 558 F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~ 637 (799)
|++++|+|++.+. + +.++||+++.+++.|+. +|...+. .+.+.+++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~--g---~~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT--T---REVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL------- 427 (673)
T ss_pred cccccceeEEEEC--C---EEEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE-------
Confidence 9999999998742 2 24569999999999984 2222221 25566778899999999875
Q ss_pred CCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCH
Q 003740 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (799)
Q Consensus 638 ~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~ 717 (799)
.|++++|+++|+||+|||++++|++||++||+++|+||||+.||.+||+++||..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 3678999999999999999999999999999999999999999999999999975
Q ss_pred HHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChH
Q 003740 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFS 792 (799)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~ 792 (799)
++||++|+||+++|+.||++ |++|+|||||+||||||++|||||||| +|||+||||||+ ||+
T Consensus 483 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls 549 (673)
T PRK14010 483 -----------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPT 549 (673)
T ss_pred -----------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999 999
Q ss_pred hHHHhh
Q 003740 793 SRKTYI 798 (799)
Q Consensus 793 si~~~i 798 (799)
+|++++
T Consensus 550 ~Iv~av 555 (673)
T PRK14010 550 KLMEVV 555 (673)
T ss_pred HHHHHH
Confidence 999886
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-89 Score=785.51 Aligned_cols=517 Identities=25% Similarity=0.350 Sum_probs=425.7
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhcc--cC---CCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcee
Q 003740 169 EALHDMTLMILAVCALVSLVVGIAT--EG---WPKGAHDGL---GIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240 (799)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~--~~---~~~~~~d~~---~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v 240 (799)
.+|+|+.++++++++++++++++.. .+ ....||++. .+++.+++..++++..+++.++++++|.+..++..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4678999999999999999987642 11 113588753 344556677778888899999999999886666568
Q ss_pred EEEe-CCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCC--EEEccceeeeceEE
Q 003740 241 QVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCK 317 (799)
Q Consensus 241 ~V~R-~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~--~v~sGt~v~~G~~~ 317 (799)
+|+| ||++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|..++. .+|+||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 5999999999999999998764 49999999999999
Q ss_pred EEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHH
Q 003740 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (799)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (799)
++|+++|.+|++|+|++++++++.++||+|..++.+...+..+.++ +++++|.+.. |.+.
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~------------~~~~----- 246 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAA------------YGGN----- 246 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHH------------hcCh-----
Confidence 9999999999999999999999999999998888776554432221 1122221111 1110
Q ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCee
Q 003740 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (799)
Q Consensus 398 ~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (799)
...+.++++++|++|||+|+...+.....++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 247 ~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~ 326 (675)
T TIGR01497 247 AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV 326 (675)
T ss_pred hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC
Confidence 12466779999999999998888888888999999999999999999999999999999999999999999998753211
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEec
Q 003740 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (799)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~ 557 (799)
+..+++ ..++.++. .+.||+++|+++++.+.+.+... ..++..+..|
T Consensus 327 ------------------~~~~ll-~~aa~~~~------------~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~p 373 (675)
T TIGR01497 327 ------------------DEKTLA-DAAQLASL------------ADDTPEGKSIVILAKQLGIREDD--VQSLHATFVE 373 (675)
T ss_pred ------------------cHHHHH-HHHHHhcC------------CCCCcHHHHHHHHHHHcCCCccc--cccccceEEE
Confidence 111222 22333321 15689999999999877654322 1234567899
Q ss_pred CCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC
Q 003740 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (799)
Q Consensus 558 F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~ 637 (799)
|++.++++++.+. ++ +.++||++|.++..|.. +|...| ..+++.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------ 433 (675)
T TIGR01497 374 FTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------ 433 (675)
T ss_pred EcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------
Confidence 9999888877543 22 56899999999998852 222222 3467778899999999999984
Q ss_pred CCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCH
Q 003740 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (799)
Q Consensus 638 ~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~ 717 (799)
+.+++|+++++||+|||++++|++||++||+++|+||||..||.++|+++||..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 358999999999999999999999999999999999999999999999999965
Q ss_pred HHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChH
Q 003740 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFS 792 (799)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~ 792 (799)
++||++|+||..+|+.+|++ |+.|+|+|||+||+|||++|||||||| +|+++||++||+ ||+
T Consensus 488 -----------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 488 -----------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred -----------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999 999
Q ss_pred hHHHhh
Q 003740 793 SRKTYI 798 (799)
Q Consensus 793 si~~~i 798 (799)
+|++++
T Consensus 555 ~Iv~av 560 (675)
T TIGR01497 555 KLIEVV 560 (675)
T ss_pred HHHHHH
Confidence 999886
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-90 Score=849.19 Aligned_cols=624 Identities=25% Similarity=0.329 Sum_probs=495.7
Q ss_pred cCCCccCCCCCccH---HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003740 150 YGINKFTESPARGF---WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSL 226 (799)
Q Consensus 150 ~g~N~~~~~~~~~f---~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~ 226 (799)
|..|.+...+...+ ++.+|+||+.+.++++++++++++++.+... +....+++++++++++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-------~~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-------YRGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-------CccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56788877766555 6899999999999999999999999876542 2234456777777888999999999
Q ss_pred HHHHHhhhhcCceeEEEeC-CeEEEEecCCCCcccEEEecCCCeecccEEEEeece----eEEecccccCCCCccccCCC
Q 003740 227 QFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (799)
Q Consensus 227 ~~~~l~~~~~~~~v~V~R~-g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~----l~vDeS~lTGEs~pv~k~~~ 301 (799)
++++.++..++..++|+|+ |++++|+++||+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|...
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 9998888888899999996 899999999999999999999999999999999654 89999999999999988421
Q ss_pred -----------------------------------------------CCEEEccceeee-ceEEEEEEEEcccchhHHHH
Q 003740 302 -----------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLM 333 (799)
Q Consensus 302 -----------------------------------------------~~~v~sGt~v~~-G~~~~~V~~vG~~T~~g~i~ 333 (799)
++++++||.+.+ |++.++|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 256889999998 999999999999996654
Q ss_pred HhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccC-----CcchHHHHHHHHHHHHHH
Q 003740 334 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIV 408 (799)
Q Consensus 334 ~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~av~il 408 (799)
+......++++++++++++..++..+.++++++++++.. ++........|+.. ......++..|..++.++
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~---~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAG---IWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHH---heecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 445566678999999999988887777666665554321 11110001112110 011123445677888899
Q ss_pred HHHhCCchhHHHHHHHHHHH------HHHhhh----hhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeee
Q 003740 409 VVAVPEGLPLAVTLSLAFAM------KKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (799)
Q Consensus 409 vva~P~~Lplav~l~l~~~~------~~l~~~----~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (799)
..++|++||..++++.+..+ .+|.++ +++||+.+++|+||++++||+|||||||+|+|++.++++++..|
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999998 788875 49999999999999999999999999999999999999988776
Q ss_pred eecCCC--------CC---C------CC-C---------------CCCChhHHHHHHHHHHhcCCceEEecCCC---ceE
Q 003740 479 EVDNSK--------GT---P------AF-G---------------SSIPASASKLLLQSIFNNTGGEVVIGEGN---KTE 522 (799)
Q Consensus 479 ~~~~~~--------~~---~------~~-~---------------~~~~~~~~~~l~~~i~~~~~~~~~~~~~~---~~~ 522 (799)
...... .. + .. . .....+....+..++++||++....++++ ..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 422110 00 0 00 0 00001112334466777777665542222 224
Q ss_pred EcCCchHHHHHHHHHHcCCChHH--------------HhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHH
Q 003740 523 ILGTPTETAILEFGLLLGGDFQA--------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588 (799)
Q Consensus 523 ~~g~p~e~All~~~~~~g~~~~~--------------~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il 588 (799)
..++|+|.||++++...|+.+.. ....+++++.+||+|+||||+++++.+++++.+++|||||.|+
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 46999999999999988875432 1235788999999999999999999888888999999999999
Q ss_pred HhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC--------------C--------CCCCC
Q 003740 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------------D--------APIPT 646 (799)
Q Consensus 589 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~--------------~--------~~~~~ 646 (799)
++|+. .+++.++.+.+.+++|+.+|+||+++|||.++++... + .+.+|
T Consensus 548 ~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 617 (1057)
T TIGR01652 548 KRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617 (1057)
T ss_pred HHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99974 1234567788999999999999999999999753100 0 12357
Q ss_pred CcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------
Q 003740 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------- 704 (799)
Q Consensus 647 ~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~---------------------- 704 (799)
+|++|+|+++++||+||||+++|+.|++|||+|||+|||+++||.+||++|||++++.
T Consensus 618 ~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~ 697 (1057)
T TIGR01652 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKF 697 (1057)
T ss_pred hcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999987542
Q ss_pred -------------------eeecchhhhccCHH----HHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCC
Q 003740 705 -------------------IAIEGPEFREKSDE----ELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 759 (799)
Q Consensus 705 -------------------~~~~g~~~~~~~~~----~~~~~~~~~--~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG 759 (799)
++++|+++..+.++ ++.+++.+. .|+||++|+||.++|+.+|+..|++|+|||||
T Consensus 698 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG 777 (1057)
T TIGR01652 698 GLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDG 777 (1057)
T ss_pred HHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 37788887755443 344455444 59999999999999999998669999999999
Q ss_pred ccCHHhhhcCCeeeecCCCCCH--HHHHhcCC---ChHhHHHhh
Q 003740 760 TNDAPALHEADIGLAMGIAGTE--VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 760 ~NDapAL~~AdVGiamgi~gte--vak~aaDi---nf~si~~~i 798 (799)
+||+|||++||||| |++|+| .|++|||+ +|++|++++
T Consensus 778 ~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 778 ANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred CccHHHHhhcCeee--EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 99999999999999 668899 59999999 999999876
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-91 Score=804.18 Aligned_cols=616 Identities=26% Similarity=0.333 Sum_probs=466.1
Q ss_pred ccccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC-ccccccccccCCcccChhhhhhhhccCCh---HHHHh
Q 003740 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS-EYTVPEEVAASGFQICPDELGSIVEGHDI---KKLKV 117 (799)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~l~~ 117 (799)
++.|..+.| ++++.+++++++||+.++++.+.|++. ..+ ..++...++..||.+............+. +.+.+
T Consensus 13 Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~--~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~~~~~~~~~~ 89 (713)
T COG2217 13 CAACASRIE-ALNKLPGVEEARVNLATERATVVYDPE--EVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELLR 89 (713)
T ss_pred cHHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccc--ccccHHHHHHHHHhcCccccccccccchhhhhhhhhhhHHH
Confidence 346777888 999999999999999999999999865 233 57888889999998765111111111110 12222
Q ss_pred hCCHHHHHHH----hCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHH---HHHHHHHHhh
Q 003740 118 HGGVEGIAEK----LSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA---VCALVSLVVG 190 (799)
Q Consensus 118 ~~~v~~l~~~----l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~---i~a~is~~~~ 190 (799)
...+.++... +......|. ....+......-......+.|||+.+|+.++.....|.. ++++.+++++
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s 164 (713)
T COG2217 90 RLIIAGLLTLPLLLLSLGLLLGA-----FLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYS 164 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhhcch-----hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 2223333321 111111111 011111111111111125788999999999987655422 2223334444
Q ss_pred hcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhcCceeEEEe-CCeEEEEecCCCCcccEEE
Q 003740 191 IATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIVH 263 (799)
Q Consensus 191 ~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~------~~~~~~v~V~R-~g~~~~i~~~~LvvGDiv~ 263 (799)
.+..-+. .||+..++++.++++ ++|.+.+...+..+ .+.|..+++++ ||++++||+++|++||+|.
T Consensus 165 ~~~~~~~-~yf~~aa~ii~l~~~------G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~ 237 (713)
T COG2217 165 LYATLFP-VYFEEAAMLIFLFLL------GRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVL 237 (713)
T ss_pred HHHHhhh-hHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEE
Confidence 4321111 677777666655554 77777776554322 24677887776 5668999999999999999
Q ss_pred ecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCC
Q 003740 264 LCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (799)
Q Consensus 264 l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (799)
|+|||+||+||+|++|++ .||||+|||||.|+.|.+++. |++||.|.+|+.+++|+++|.+|.+++|.+++++++..|
T Consensus 238 VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~K 315 (713)
T COG2217 238 VRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSK 315 (713)
T ss_pred ECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCC
Confidence 999999999999999998 999999999999999999997 999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Q 003740 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (799)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~ 423 (799)
+|+|+..|+++.+|+++++++++++|++|.+..- .+|...|..++++||++|||+|.+++|++
T Consensus 316 a~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~-----------------~~~~~a~~~a~avLVIaCPCALgLAtP~a 378 (713)
T COG2217 316 APIQRLADRVASYFVPVVLVIAALTFALWPLFGG-----------------GDWETALYRALAVLVIACPCALGLATPTA 378 (713)
T ss_pred chHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-----------------CcHHHHHHHHHhheeeeCccHHHhHHHHH
Confidence 9999999999999999999999999987643210 03556889999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHH
Q 003740 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (799)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (799)
+..++.+.+++|+|+|+.+++|+++++|+|+||||||||+|+|+|+++...+. + .++++++.
T Consensus 379 i~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------------e~~~L~la-- 440 (713)
T COG2217 379 ILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------------EDELLALA-- 440 (713)
T ss_pred HHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------------HHHHHHHH--
Confidence 99999999999999999999999999999999999999999999999876543 0 12444443
Q ss_pred HHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCc
Q 003740 504 SIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (799)
Q Consensus 504 ~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa 583 (799)
++++. .|.||..+||++++...+.... ..|.... -.|+..+..+..+ .-|.
T Consensus 441 -------AalE~-------~S~HPiA~AIv~~a~~~~~~~~-----------~~~~~i~-G~Gv~~~v~g~~v---~vG~ 491 (713)
T COG2217 441 -------AALEQ-------HSEHPLAKAIVKAAAERGLPDV-----------EDFEEIP-GRGVEAEVDGERV---LVGN 491 (713)
T ss_pred -------HHHHh-------cCCChHHHHHHHHHHhcCCCCc-----------cceeeec-cCcEEEEECCEEE---EEcC
Confidence 22222 2889999999998887652100 0111111 1233323333222 2366
Q ss_pred hHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcc
Q 003740 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (799)
Q Consensus 584 ~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~ 663 (799)
+..+.. .+...+ . ..+..+.+..+|..++.++ .|..++|++++.|++||
T Consensus 492 ~~~~~~--------~~~~~~--~-----~~~~~~~~~~~G~t~v~va----------------~dg~~~g~i~~~D~~R~ 540 (713)
T COG2217 492 ARLLGE--------EGIDLP--L-----LSERIEALESEGKTVVFVA----------------VDGKLVGVIALADELRP 540 (713)
T ss_pred HHHHhh--------cCCCcc--c-----hhhhHHHHHhcCCeEEEEE----------------ECCEEEEEEEEeCCCCh
Confidence 554422 111111 0 3445667778888777776 45689999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHH
Q 003740 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 743 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~ 743 (799)
+++++|+.||+.|+++.|+||||..+|++||+++||.. |+|.+.|+||.++|+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------v~AellPedK~~~V~ 593 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------VRAELLPEDKAEIVR 593 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------heccCCcHHHHHHHH
Confidence 99999999999999999999999999999999999965 999999999999999
Q ss_pred HHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 744 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 744 ~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.||++ |++|+|||||+||+|||++|||||||| +|||+|+|+||+ |...+.++|
T Consensus 594 ~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 594 ELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred HHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999 999999999999999999999999999 899999999999 898888876
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-84 Score=791.00 Aligned_cols=627 Identities=22% Similarity=0.302 Sum_probs=490.5
Q ss_pred hcCCCccCCCCCcc--H-HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 003740 149 IYGINKFTESPARG--F-WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQS 225 (799)
Q Consensus 149 ~~g~N~~~~~~~~~--f-~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~ 225 (799)
.|..|.+...+... | .+.+|+||+...++++++++++.+++.+... ...+.++++++++++++++++.++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-------~~~t~~~PL~~vl~v~~ike~~Ed 158 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-------GRGASILPLAFVLLVTAVKDAYED 158 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-------CcchHHHHHHHHHHHHHHHHHHHH
Confidence 58899998765432 2 4789999999999999999999998876542 223556788889999999999999
Q ss_pred HHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeece----eEEecccccCCCCccccCCC
Q 003740 226 LQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (799)
Q Consensus 226 ~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~----l~vDeS~lTGEs~pv~k~~~ 301 (799)
.++++.++..++..++|+|+|.++++++.+|+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|..+
T Consensus 159 ~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 159 WRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 99999999888999999999999999999999999999999999999999999433 79999999999999988421
Q ss_pred --------------------------------------------CCEEEccceeeec-eEEEEEEEEcccchhHHHHHhh
Q 003740 302 --------------------------------------------NPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMATL 336 (799)
Q Consensus 302 --------------------------------------------~~~v~sGt~v~~G-~~~~~V~~vG~~T~~g~i~~~~ 336 (799)
+++++.||.+.+. ++.++|++||.+| |++.+-
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhcC
Confidence 2456777777764 7999999999999 466666
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcc--ccCCc---------c--h----HHHHH
Q 003740 337 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW--TWSGD---------D--A----LEILE 399 (799)
Q Consensus 337 ~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~--~~~~~---------~--~----~~~~~ 399 (799)
..+..+.+++++++|++..++..+.++++++++++... +... .....| .|... . . ...+.
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~--~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV--WLRR-HRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFF 392 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh--hhcc-ccccccccccccccccccccccccccchhhHHHHH
Confidence 66667889999999999988877777666655544211 1111 001101 11100 0 0 01122
Q ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhh----------hhhcccchhhccCCceeEeecCCCccccCceEEE
Q 003740 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK----------ALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (799)
Q Consensus 400 ~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~----------ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (799)
.|...+.++-..+|.+|+..+.+........|.++. +.||+.+..|+||++++||+|||||||+|+|++.
T Consensus 393 ~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk 472 (1178)
T PLN03190 393 TFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 472 (1178)
T ss_pred HHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEE
Confidence 333445566688999999999999977777777766 7799999999999999999999999999999999
Q ss_pred EEEEcCeeeeecCCC-------------C---CCCCC------------CCCC-h--hHHHHHHHHHHhcCCceEEecCC
Q 003740 470 KACICEEIKEVDNSK-------------G---TPAFG------------SSIP-A--SASKLLLQSIFNNTGGEVVIGEG 518 (799)
Q Consensus 470 ~~~~~~~~~~~~~~~-------------~---~~~~~------------~~~~-~--~~~~~l~~~i~~~~~~~~~~~~~ 518 (799)
++++++..|..+... . .+... .... + .....+..++++||+......++
T Consensus 473 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~ 552 (1178)
T PLN03190 473 CASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDD 552 (1178)
T ss_pred EEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCC
Confidence 999987766421100 0 00000 0000 0 11233456778888776542111
Q ss_pred --C----ce-EEcCCchHHHHHHHHHHcCC------------ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEE
Q 003740 519 --N----KT-EILGTPTETAILEFGLLLGG------------DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVH 579 (799)
Q Consensus 519 --~----~~-~~~g~p~e~All~~~~~~g~------------~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~ 579 (799)
+ .. +..++|+|.||+.+|...|+ +....+..+++++++||+|+||||+|+++.+++.+.++
T Consensus 553 ~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~ 632 (1178)
T PLN03190 553 TSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVF 632 (1178)
T ss_pred CCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEE
Confidence 1 12 34559999999999999987 34445678899999999999999999999888889999
Q ss_pred EcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC-------------------
Q 003740 580 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA------------------- 640 (799)
Q Consensus 580 ~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~------------------- 640 (799)
+|||+|.|+++|+... +++.++.+.+.+++|+.+|+|||++|||+++.+...
T Consensus 633 ~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~ 703 (1178)
T PLN03190 633 VKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAAL 703 (1178)
T ss_pred EecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHH
Confidence 9999999999997542 233566788899999999999999999999753110
Q ss_pred ---CCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-------------
Q 003740 641 ---DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------------- 704 (799)
Q Consensus 641 ---~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~------------- 704 (799)
..+.+|.|++++|+++++||+|++++++|+.|+++||+|+|+|||+..||.+||+.|||++++.
T Consensus 704 l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~ 783 (1178)
T PLN03190 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESC 783 (1178)
T ss_pred HHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhH
Confidence 0134689999999999999999999999999999999999999999999999999999975531
Q ss_pred ------------------------------------eeecchhhhccCH----HHHhhhcCC--ceEEEecCcccHHHHH
Q 003740 705 ------------------------------------IAIEGPEFREKSD----EELSKLIPK--IQVMARSSPMDKHTLV 742 (799)
Q Consensus 705 ------------------------------------~~~~g~~~~~~~~----~~~~~~~~~--~~v~ar~sP~dK~~lV 742 (799)
++++|.++..+.+ +++.++..+ ..|+||++|.||.++|
T Consensus 784 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV 863 (1178)
T PLN03190 784 RKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIV 863 (1178)
T ss_pred HHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHH
Confidence 4667777776654 345555544 4479999999999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCH--HHHHhcCC---ChHhHHHhhC
Q 003740 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VELECCCF---NFSSRKTYIL 799 (799)
Q Consensus 743 ~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gte--vak~aaDi---nf~si~~~i~ 799 (799)
+.+|+..+++|+|+|||+||+|||++||||| ||+|+| .|+.|||+ .|.-+.++++
T Consensus 864 ~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 864 ALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred HHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 9999874589999999999999999999999 889999 79999999 9988887764
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-81 Score=702.12 Aligned_cols=594 Identities=24% Similarity=0.341 Sum_probs=448.3
Q ss_pred ccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHH
Q 003740 132 ITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSIL 211 (799)
Q Consensus 132 ~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~il 211 (799)
.+.||...+ +.+|+..||.|.+.. +.+|.+.++.++.-+|+.....++.++++.-. .+|.+.+|++.-+
T Consensus 157 ~~~gL~~~~--~~~r~~iyG~N~i~l-~ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv 225 (1140)
T KOG0208|consen 157 VSNGLERQE--IIDRRIIYGRNVISL-PIKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISV 225 (1140)
T ss_pred ccCCccHHH--HHhHHhhcCCceeee-ecccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHH
Confidence 357888766 889999999999964 56789999999998888766555544433221 2334444443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-cCceeEEEeCCeEEEEecCCCCcccEEEecC-CCeecccEEEEeeceeEEecccc
Q 003740 212 LVVFVTATSDYKQSLQFKDLDREK-KKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSL 289 (799)
Q Consensus 212 lv~~~~~~~~~~~~~~~~~l~~~~-~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~-Gd~vPaDg~ll~g~~l~vDeS~l 289 (799)
.-+++ .-|...++-.++.+.. ....|+|+|||.+++|.++|||||||+.+.+ |-..|||+++++|+ |.||||||
T Consensus 226 ~Si~~---sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmL 301 (1140)
T KOG0208|consen 226 YSIVL---SVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESML 301 (1140)
T ss_pred HHHHH---HHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccc
Confidence 22233 3343444444454432 3458999999999999999999999999998 99999999999996 79999999
Q ss_pred cCCCCccccCCC------------------CCEEEccceeee------ceEEEEEEEEcccchhHHHHHhhcCCCCCCCh
Q 003740 290 TGESEPVNVNAL------------------NPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (799)
Q Consensus 290 TGEs~pv~k~~~------------------~~~v~sGt~v~~------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 345 (799)
||||.|+.|.+- .+++|.||++.+ +.+.+.|++||.+|..|++.+++..++.. +
T Consensus 302 TGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~--~ 379 (1140)
T KOG0208|consen 302 TGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV--N 379 (1140)
T ss_pred cCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc--c
Confidence 999999999521 347999999974 78999999999999999999999887543 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Q 003740 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (799)
Q Consensus 346 lq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~ 425 (799)
++...| +-.|.....++|++.|+...+.+... |. ++-..+..++-++.+.+|++||.+.++...
T Consensus 380 fkfyrd--s~~fi~~l~~ia~~gfiy~~i~l~~~----g~----------~~~~iiirsLDliTi~VPPALPAaltvG~~ 443 (1140)
T KOG0208|consen 380 FKFYRD--SFKFILFLVIIALIGFIYTAIVLNLL----GV----------PLKTIIIRSLDLITIVVPPALPAALTVGII 443 (1140)
T ss_pred cHHHHH--HHHHHHHHHHHHHHHHHHHhHhHHHc----CC----------CHHHHhhhhhcEEEEecCCCchhhhhHHHH
Confidence 332223 33333333444555554433322211 11 345678889999999999999999999999
Q ss_pred HHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeec-------CCCC--CCCCCCCCChh
Q 003740 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD-------NSKG--TPAFGSSIPAS 496 (799)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~ 496 (799)
++.+||.|+||+|-+++.+...|+.+++|||||||||++.+.+..+.......... .+.. ...........
T Consensus 444 ~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 523 (1140)
T KOG0208|consen 444 YAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSL 523 (1140)
T ss_pred HHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCC
Confidence 99999999999999999999999999999999999999999998887643210000 0000 00000000001
Q ss_pred HHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHc-------CCC-------------h-----HHHh----
Q 003740 497 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-------GGD-------------F-----QAER---- 547 (799)
Q Consensus 497 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~-------g~~-------------~-----~~~~---- 547 (799)
....+..+++.||+-.... ....|+|.|.-+.+..... +.. . ....
T Consensus 524 ~~~~~~~a~atCHSL~~v~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~ 598 (1140)
T KOG0208|consen 524 PMGNLVAAMATCHSLTLVD-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGE 598 (1140)
T ss_pred chHHHHHHHhhhceeEEeC-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCC
Confidence 1224556677776433222 2457777776655432100 000 0 0000
Q ss_pred hhcceEEEecCCCCCceEEEEEEeCC-CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccce
Q 003740 548 QASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 626 (799)
Q Consensus 548 ~~~~i~~~~~F~s~~k~~~vv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~ 626 (799)
..+.+++.+||+|.-+||+|++..++ ....+|+|||||.|.+.|+. +.....+++.++.|+.+|+|+
T Consensus 599 ~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Yt~~GfRV 666 (1140)
T KOG0208|consen 599 GEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEYTHQGFRV 666 (1140)
T ss_pred cceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHHHhCCeEE
Confidence 13668999999999999999999764 57899999999999999974 122355889999999999999
Q ss_pred eeEEEEEcCCC-----CCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003740 627 LCLACMEIGNE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 627 l~~a~~~~~~~-----~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
||+|+|+++.. +...++..|.|++|+|++.|++++|++.+.+|++|++|.||++|+||||..||..+||+|||+.
T Consensus 667 IAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~ 746 (1140)
T KOG0208|consen 667 IALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIE 746 (1140)
T ss_pred EEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccC
Confidence 99999999876 1234567899999999999999999999999999999999999999999999999999999986
Q ss_pred CCc-------------------------------------------------------eeecchhhhcc---CHHHHhhh
Q 003740 702 DNG-------------------------------------------------------IAIEGPEFREK---SDEELSKL 723 (799)
Q Consensus 702 ~~~-------------------------------------------------------~~~~g~~~~~~---~~~~~~~~ 723 (799)
+.. .+++|+.|+-+ .++.+.++
T Consensus 747 p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~I 826 (1140)
T KOG0208|consen 747 PQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKI 826 (1140)
T ss_pred CCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHH
Confidence 432 56777777654 45677778
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 724 IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 724 ~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
+.+..|||||+|.||.++|++||+. |..|+|||||.||+.|||+||||||++
T Consensus 827 l~~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLS 878 (1140)
T KOG0208|consen 827 LLKGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLS 878 (1140)
T ss_pred HhcCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchh
Confidence 8899999999999999999999998 999999999999999999999999997
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-82 Score=714.04 Aligned_cols=635 Identities=22% Similarity=0.284 Sum_probs=475.6
Q ss_pred ccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhh-hhhhhc-----cCChHH---
Q 003740 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE-LGSIVE-----GHDIKK--- 114 (799)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~-----~~~~~~--- 114 (799)
.+....|+.+.+.+++..+++.+.+.++.+.|++. ...+.++...+.+.||...... .....+ ..+.++
T Consensus 159 s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~--~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l~~~~ei~~w~~ 236 (951)
T KOG0207|consen 159 SCVSKIESILERLRGVKSFSVSLATDTAIVVYDPE--ITGPRDIIKAIEETGFEASVRPYGDTTFKNSLKHKEEIRKWKR 236 (951)
T ss_pred chhhhhHHHHhhccCeeEEEEeccCCceEEEeccc--ccChHHHHHHHHhhcccceeeeccccchhhhhhhhhHHHhcch
Confidence 44556678889999999999999999999998876 5777888888999998754332 111111 111111
Q ss_pred -HHhhCCHHHHHH--Hh-----------CCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHH
Q 003740 115 -LKVHGGVEGIAE--KL-----------STSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180 (799)
Q Consensus 115 -l~~~~~v~~l~~--~l-----------~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~ 180 (799)
+....+...... +. ......|+.... .... --.-.....-+++||..+|++++.....|-.
T Consensus 237 ~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~---~L~~~vqf~~G~~fy~~A~ksL~~g~~nMdv 311 (951)
T KOG0207|consen 237 PFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGN--SLSF---VLATPVQFVGGRPFYLAAYKSLKRGSANMDV 311 (951)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhh--HHHh---hhheeeEEecceeeHHHHHHHHhcCCCCcee
Confidence 111111111111 11 112333443321 1110 0011111226899999999999988765422
Q ss_pred ---HHHHHHHHhhhcc------cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhcCceeEEEeC
Q 003740 181 ---VCALVSLVVGIAT------EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVARN 245 (799)
Q Consensus 181 ---i~a~is~~~~~~~------~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~------~~~~~~v~V~R~ 245 (799)
+.+..++++.+.. ...+..+||...|++.++.+ ++|.+++...+... .+.+.++.++.+
T Consensus 312 Lv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~l------gr~LE~~Ak~kts~alskLmsl~p~~a~ii~~ 385 (951)
T KOG0207|consen 312 LVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITL------GRWLESLAKGKTSEALSKLMSLAPSKATIIED 385 (951)
T ss_pred ehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHH------HHHHHHHhhccchHHHHHHhhcCcccceEeec
Confidence 2222222222211 12255788888887766654 89999887654332 246778999998
Q ss_pred Ce-EEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEc
Q 003740 246 GF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVG 324 (799)
Q Consensus 246 g~-~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG 324 (799)
|+ .++|++..|.+||+|.|.||++||+||++++|++ +||||++|||+.||.|..+++ |.+||.|.+|...+.+|.+|
T Consensus 386 g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT~~g 463 (951)
T KOG0207|consen 386 GSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVKATKVG 463 (951)
T ss_pred CCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEEEEecc
Confidence 86 8899999999999999999999999999999997 999999999999999999887 99999999999999999999
Q ss_pred ccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHH
Q 003740 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (799)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 404 (799)
.+|.+++|.+++++++..++|+|+.+|+++.+|+|+++++++.+|++|++..++...+. ......+..+|..+
T Consensus 464 ~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~-------~~~~~~~~~a~~~a 536 (951)
T KOG0207|consen 464 GDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYP-------RSFFDAFSHAFQLA 536 (951)
T ss_pred ccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCc-------chhhHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999976543221111 11113677889999
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCC
Q 003740 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (799)
Q Consensus 405 v~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (799)
++++++||||+|+||+|++...+....+++|+|+|..+++|++.++++|+||||||||+|+++|+++....+...
T Consensus 537 isVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~----- 611 (951)
T KOG0207|consen 537 ISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPIS----- 611 (951)
T ss_pred heEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999877654210
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce
Q 003740 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (799)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~ 564 (799)
..+.+.+. +..+.+ +.||..+|+.+|++...... ....+.....|..+-+.
T Consensus 612 ---------~~e~l~~v---------~a~Es~-------SeHPig~AIv~yak~~~~~~----~~~~~~~~~~~pg~g~~ 662 (951)
T KOG0207|consen 612 ---------LKEALALV---------AAMESG-------SEHPIGKAIVDYAKEKLVEP----NPEGVLSFEYFPGEGIY 662 (951)
T ss_pred ---------HHHHHHHH---------HHHhcC-------CcCchHHHHHHHHHhccccc----CccccceeecccCCCcc
Confidence 01222222 122222 78999999999998765110 01111222222222211
Q ss_pred EEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCC
Q 003740 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (799)
Q Consensus 565 ~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~ 644 (799)
+-+...+.. .+-|..+.+. .+|...+ +.+++..++....|..+.+++
T Consensus 663 --~~~~~~~~~---i~iGN~~~~~--------r~~~~~~------~~i~~~~~~~e~~g~tvv~v~-------------- 709 (951)
T KOG0207|consen 663 --VTVTVDGNE---VLIGNKEWMS--------RNGCSIP------DDILDALTESERKGQTVVYVA-------------- 709 (951)
T ss_pred --cceEEeeeE---EeechHHHHH--------hcCCCCc------hhHHHhhhhHhhcCceEEEEE--------------
Confidence 112222222 2236654443 3333222 236667777778898888887
Q ss_pred CCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 645 ~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
-|.+++|+++++|++|||+..+|+.||+.||+|.|+||||..||+++|+++||..
T Consensus 710 --vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------------------- 764 (951)
T KOG0207|consen 710 --VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------------------- 764 (951)
T ss_pred --ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------------
Confidence 4678999999999999999999999999999999999999999999999999765
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|+|...|+||.++||.||++ |++|+|||||+||+|||.+|||||||| .|||+|.|+||| |...++.+|
T Consensus 765 ----V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 765 ----VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAI 837 (951)
T ss_pred ----EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHH
Confidence 99999999999999999999 999999999999999999999999999 889999999999 777777665
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-80 Score=730.11 Aligned_cols=604 Identities=21% Similarity=0.267 Sum_probs=452.2
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHhhCCHH
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVE 122 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~ 122 (799)
..|....|+.....+++..+++++.+.+..+.|+.. .. ..+...++..||.+.+.+-.......+......+.-.-
T Consensus 65 ~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~---~~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 140 (741)
T PRK11033 65 PSCARKVENAVRQLAGVNQVQVLFATEKLVVDADND---IR-AQVESAVQKAGFSLRDEQAAAAAPESRLKSENLPLITL 140 (741)
T ss_pred HHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEeccc---ch-HHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHHH
Confidence 466777788888888888899999888877777543 11 34455667789987654311100100000001111001
Q ss_pred HHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHH-HHH--HH-HHHHHHHHhhhcccCCCC
Q 003740 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMT-LMI--LA-VCALVSLVVGIATEGWPK 198 (799)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~-~~i--l~-i~a~is~~~~~~~~~~~~ 198 (799)
.....+..-. .++.. ...+...... ....+.||++.+|+.++... +.| |+ ++++.+++++
T Consensus 141 ~~~~~~~~~~-~~~~~----~~~~~~~~~~---~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~-------- 204 (741)
T PRK11033 141 AVMMAISWGL-EQFNH----PFGQLAFIAT---TLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG-------- 204 (741)
T ss_pred HHHHHHHHHH-hhhhh----HHHHHHHHHH---HHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------
Confidence 1112221100 01110 0011111010 01245789999999997643 222 33 3444444433
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~ 278 (799)
.|+++..+++.+++.-++....+++.++..++|.+ +.+..++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 35566555544544444444444444445555555 45678999999999999999999999999999999999999999
Q ss_pred eceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHH
Q 003740 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (799)
Q Consensus 279 g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~ 358 (799)
|+. .||||+|||||.|+.|..++. ||+||.+.+|.++++|+++|.+|.+|+|.+++++++.+++|+|+.+|+++.+++
T Consensus 284 g~~-~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~ 361 (741)
T PRK11033 284 PFA-SFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYT 361 (741)
T ss_pred CcE-EeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 985 999999999999999999885 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhh
Q 003740 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (799)
Q Consensus 359 ~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilv 438 (799)
++++++++++|++|.+.+ + . .|...+..++++++++|||+|++++|+++..++.+++|+|+++
T Consensus 362 ~~v~~~a~~~~~~~~~~~-------~--~--------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gili 424 (741)
T PRK11033 362 PAIMLVALLVILVPPLLF-------A--A--------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALI 424 (741)
T ss_pred HHHHHHHHHHHHHHHHHc-------c--C--------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEE
Confidence 999999999998863211 0 0 2345678899999999999999999999999999999999999
Q ss_pred cccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003740 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (799)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (799)
|+++++|+|+++|+||||||||||+|+|+|++++..+... .++++.+. .. ++.
T Consensus 425 k~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~l~~a---a~------~e~--- 477 (741)
T PRK11033 425 KGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS---------------ESELLALA---AA------VEQ--- 477 (741)
T ss_pred cCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC---------------HHHHHHHH---HH------Hhc---
Confidence 9999999999999999999999999999999987543210 11223222 11 111
Q ss_pred CceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceE---EEEEEeCCCcEEEEEcCchHHHHHhccccc
Q 003740 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM---GVVIELPEGGFRVHCKGASEIILAACDKFL 595 (799)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~---~vv~~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (799)
.+.||+++|+++++...+.+ .||.++.+.+ ++.....+..+. -|+++.+.+
T Consensus 478 ----~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~~---ig~~~~~~~------ 531 (741)
T PRK11033 478 ----GSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGERVL---ICAPGKLPP------ 531 (741)
T ss_pred ----CCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEEEE---Eecchhhhh------
Confidence 27899999999998876543 4666666654 232233333332 367665421
Q ss_pred ccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhC
Q 003740 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675 (799)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~a 675 (799)
++ ..+.+.++.+..+|++++++++ |.+++|+++|+|++|||++++|++|+++
T Consensus 532 --------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~ 583 (741)
T PRK11033 532 --------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIALQDTLRADARQAISELKAL 583 (741)
T ss_pred --------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEEecCCchhHHHHHHHHHHC
Confidence 12 2244556788999999999984 5689999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEE
Q 003740 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (799)
Q Consensus 676 GI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~ 755 (799)
|++++|+|||+..+|.++|+++||. ++++.+|+||..+|+.||+. +.|+|
T Consensus 584 gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~m 633 (741)
T PRK11033 584 GIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLAM 633 (741)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEEE
Confidence 9999999999999999999999995 67889999999999999954 68999
Q ss_pred EcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 756 TGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 756 ~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+|||+||+|||++|||||||| +|+++++++||+ ++..|.++|
T Consensus 634 vGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred EECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 999999999999999999999 999999999999 898888765
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-80 Score=660.46 Aligned_cols=606 Identities=25% Similarity=0.368 Sum_probs=481.8
Q ss_pred hhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCC
Q 003740 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (799)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~ 196 (799)
..+.++.+.+.|...-. ||++++ +.+|++.||.|++.+++...|.++ +--+.+|.-|..-.+|++...+.-- .|.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKF-l~Fm~~PlswVMEaAAimA~~Lang-~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKF-LGFMWNPLSWVMEAAAIMAIGLANG-GGR 93 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHH-HHHHhchHHHHHHHHHHHHHHHhcC-CCC
Confidence 34567888887776654 999988 999999999999987665555443 3344566667777788776655422 245
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEE
Q 003740 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (799)
Q Consensus 197 ~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~l 276 (799)
+..|.|-+.|...+++...++.+.+|..-.....|.+.+.+ +..|+|||+|.++.+.+||||||+.++.||+|||||++
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~-KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAP-KAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCc-ccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 66899998888877777777777777777777777765554 78999999999999999999999999999999999999
Q ss_pred EeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHH
Q 003740 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (799)
Q Consensus 277 l~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (799)
++|+-|.||+|.|||||.|+.|.+++. +||||.|.+|.+.++|++||.+|..|+-..++.. ....--+|+-++.+.++
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 999999999999999999999999998 9999999999999999999999999999999988 44458889888888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHhhhh
Q 003740 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKMMNDK 435 (799)
Q Consensus 357 ~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva-~P~~Lplav~l~l~~~~~~l~~~~ 435 (799)
+...+. +.+ ++.+...|.... ...+.....+.++++. +|.|+|..++.+++.+..+|.++|
T Consensus 251 ci~si~-~g~--lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqg 312 (942)
T KOG0205|consen 251 CICSIA-LGM--LIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (942)
T ss_pred HHHHHH-HHH--HHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcc
Confidence 543221 111 122222222111 1223333445566666 999999999999999999999999
Q ss_pred hhhcccchhhccCCceeEeecCCCccccCceEEEE--EEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceE
Q 003740 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK--ACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEV 513 (799)
Q Consensus 436 ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 513 (799)
+++++++|+|.|+.++++|+|||||||.|+++|.+ +.+. ....+++.+-++ . |..+ ..
T Consensus 313 AItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~---------------v~gv~~D~~~L~-A--~rAs--r~ 372 (942)
T KOG0205|consen 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF---------------VKGVDKDDVLLT-A--ARAS--RK 372 (942)
T ss_pred cHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee---------------ecCCChHHHHHH-H--HHHh--hh
Confidence 99999999999999999999999999999999976 2111 011122222221 1 1111 11
Q ss_pred EecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccc
Q 003740 514 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 593 (799)
Q Consensus 514 ~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~ 593 (799)
+ ..+.+|.|++.... +..+.+..++.++..|||+..||....+..+++..+...|||||.|++.|..
T Consensus 373 e---------n~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~ 439 (942)
T KOG0205|consen 373 E---------NQDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE 439 (942)
T ss_pred c---------ChhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc
Confidence 1 44788999987643 3478888999999999999999999999999999999999999999999973
Q ss_pred ccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHH
Q 003740 594 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (799)
Q Consensus 594 ~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~ 673 (799)
+.+.++.+.+.+++|+++|+|.+++|++..++... +.......|+|+.-+-||+|.+..++|+.-.
T Consensus 440 -----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~~~gllp~fdpprhdsa~tirral 505 (942)
T KOG0205|consen 440 -----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWEFVGLLPLFDPPRHDSAETIRRAL 505 (942)
T ss_pred -----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcccccccccCCCCccchHHHHHHHH
Confidence 34566788999999999999999999998876422 2334567899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCccC--Cceeecchhh-hccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC
Q 003740 674 SAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEF-REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750 (799)
Q Consensus 674 ~aGI~v~mlTGD~~~tA~aiA~~~GI~~~--~~~~~~g~~~-~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G 750 (799)
..|++|.|+|||...-++..++++|.-+. ++..+-|.+- .++......+.+.+..=||...|++|+++|+.||++ |
T Consensus 506 ~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~ 584 (942)
T KOG0205|consen 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-K 584 (942)
T ss_pred hccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-C
Confidence 99999999999999999999999998653 1111222221 123334455666667789999999999999999999 9
Q ss_pred CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHh
Q 003740 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTY 797 (799)
Q Consensus 751 ~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~ 797 (799)
|.++|+|||+||+||||.||+|||.. .+||.|+.+||| -.|-|+.+
T Consensus 585 hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~a 635 (942)
T KOG0205|consen 585 HIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISA 635 (942)
T ss_pred ceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHH
Confidence 99999999999999999999999999 999999999999 56655554
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-75 Score=669.94 Aligned_cols=499 Identities=27% Similarity=0.390 Sum_probs=391.1
Q ss_pred CccHHHHHHHHHhhHHHHH--HH-HHHHHHHHhhh---ccc-----CCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHH
Q 003740 160 ARGFWVYVWEALHDMTLMI--LA-VCALVSLVVGI---ATE-----GWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQ 227 (799)
Q Consensus 160 ~~~f~~~~~~~l~~~~~~i--l~-i~a~is~~~~~---~~~-----~~~~~~~d~~~i~~~illv-~~~~~~~~~~~~~~ 227 (799)
+.|||+.+|+.++...+.| |+ ++.+.+++++. ... +..++||++.+++++++++ -+++...+++.++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~ 81 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDA 81 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999998655433 22 22223333222 111 1224788988776655544 23333333333334
Q ss_pred HHHHhhhhcCceeEEEeC-CeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEE
Q 003740 228 FKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLL 306 (799)
Q Consensus 228 ~~~l~~~~~~~~v~V~R~-g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~ 306 (799)
.++|.+ ..+..++|+|+ |.+++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|..++. ||
T Consensus 82 ~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~ 158 (562)
T TIGR01511 82 LSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP-VI 158 (562)
T ss_pred HHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCCCCE-EE
Confidence 444444 45668889885 677999999999999999999999999999999986 999999999999999999886 99
Q ss_pred ccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCc
Q 003740 307 SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH 386 (799)
Q Consensus 307 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~ 386 (799)
+||.|.+|+++++|+++|.+|.+|+|.+++.+++..++|+|+.++++++++.++++++++++|++|.
T Consensus 159 aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------- 225 (562)
T TIGR01511 159 AGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------- 225 (562)
T ss_pred eeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999888887652
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCce
Q 003740 387 WTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHM 466 (799)
Q Consensus 387 ~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m 466 (799)
..+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+|+++|+||||||||||+|+|
T Consensus 226 ------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~ 293 (562)
T TIGR01511 226 ------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKP 293 (562)
T ss_pred ------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCE
Confidence 25678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHH
Q 003740 467 TVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAE 546 (799)
Q Consensus 467 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~ 546 (799)
+|.++...+... .++.+.+. .... ..+.||+++|+++++.+.+.+...
T Consensus 294 ~v~~i~~~~~~~---------------~~~~l~~a---a~~e-------------~~s~HPia~Ai~~~~~~~~~~~~~- 341 (562)
T TIGR01511 294 TVTDVHVFGDRD---------------RTELLALA---AALE-------------AGSEHPLAKAIVSYAKEKGITLVE- 341 (562)
T ss_pred EEEEEecCCCCC---------------HHHHHHHH---HHHh-------------ccCCChHHHHHHHHHHhcCCCcCC-
Confidence 999986543210 11233322 1111 126799999999999876643211
Q ss_pred hhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccce
Q 003740 547 RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 626 (799)
Q Consensus 547 ~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~ 626 (799)
..+|.... ..++....++.. +..|+++.+.. ++. .++ .+.++|.++
T Consensus 342 --------~~~~~~~~-g~Gi~~~~~g~~---~~iG~~~~~~~--------~~~--~~~------------~~~~~g~~~ 387 (562)
T TIGR01511 342 --------VSDFKAIP-GIGVEGTVEGTK---IQLGNEKLLGE--------NAI--KID------------GKAEQGSTS 387 (562)
T ss_pred --------CCCeEEEC-CceEEEEECCEE---EEEECHHHHHh--------CCC--CCC------------hhhhCCCEE
Confidence 01111100 112222222222 23355554321 111 111 124578888
Q ss_pred eeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCcee
Q 003740 627 LCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706 (799)
Q Consensus 627 l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~ 706 (799)
+.++ .|.+++|++.++|++|||++++|+.|++.|+++.|+|||+..++.++|+++||.
T Consensus 388 ~~~~----------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------ 445 (562)
T TIGR01511 388 VLVA----------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------ 445 (562)
T ss_pred EEEE----------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------
Confidence 7775 567899999999999999999999999999999999999999999999999993
Q ss_pred ecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHh
Q 003740 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELEC 786 (799)
Q Consensus 707 ~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~a 786 (799)
++++..|++|.++++.++++ |+.|+|+|||.||+||+++|||||+|| .|+++++++
T Consensus 446 ----------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~ 501 (562)
T TIGR01511 446 ----------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEA 501 (562)
T ss_pred ----------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhh
Confidence 78999999999999999998 999999999999999999999999999 899999999
Q ss_pred cCC-----ChHhHHHhh
Q 003740 787 CCF-----NFSSRKTYI 798 (799)
Q Consensus 787 aDi-----nf~si~~~i 798 (799)
||+ ++..+.+++
T Consensus 502 Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 502 ADVVLMRNDLNDVATAI 518 (562)
T ss_pred CCEEEeCCCHHHHHHHH
Confidence 998 777777654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=690.35 Aligned_cols=618 Identities=22% Similarity=0.277 Sum_probs=448.3
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh--hh--hcc---CChHHH
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG--SI--VEG---HDIKKL 115 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~---~~~~~l 115 (799)
..|....|+.....+++..+++++.+.+..+.. ......+...++..||.+.+.+-. .. .++ ++.+.+
T Consensus 111 a~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~-----~~s~~~I~~~I~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 185 (834)
T PRK10671 111 ASCVSRVQNALQSVPGVTQARVNLAERTALVMG-----SASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAQATMKRF 185 (834)
T ss_pred HHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc-----cCCHHHHHHHHHhcCCCccccccccchhhhhhhhhHHHHHHH
Confidence 356666777777778888888888777655542 122334455567789987542210 00 000 111122
Q ss_pred HhhCCHHHHHH----HhCCCc-cCCCCccHHHHHHHHHhc-CCCccCCCCCccHHHHHHHHHhhHHHHH--HH-HHHHHH
Q 003740 116 KVHGGVEGIAE----KLSTSI-TDGISTSEHLLNRRKEIY-GINKFTESPARGFWVYVWEALHDMTLMI--LA-VCALVS 186 (799)
Q Consensus 116 ~~~~~v~~l~~----~l~~~~-~~Gl~~~~~~~~~r~~~~-g~N~~~~~~~~~f~~~~~~~l~~~~~~i--l~-i~a~is 186 (799)
.+...+..+.. .+..-. ..-+.... ...+...+ ..-......+++|++.+|++++.....| |+ ++++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a 263 (834)
T PRK10671 186 RWQAIVALAVGIPVMVWGMIGDNMMVTADN--RSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAA 263 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccc--hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 22222333332 111100 00011110 00111000 0000011247789999999998654433 22 222233
Q ss_pred HHhhh----c----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhhhhcCceeEEEeCCeEEEE
Q 003740 187 LVVGI----A----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFK-------DLDREKKKITVQVARNGFRRKI 251 (799)
Q Consensus 187 ~~~~~----~----~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~-------~l~~~~~~~~v~V~R~g~~~~i 251 (799)
+++++ . ..+..+.|||..+++++++++ ++|.+++... +|.+ +.+..++|+|+|++++|
T Consensus 264 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~~~~~~~~~~L~~-l~p~~a~~~~~~~~~~v 336 (834)
T PRK10671 264 WLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINL------GHMLEARARQRSSKALEKLLD-LTPPTARVVTDEGEKSV 336 (834)
T ss_pred HHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhc-cCCCEEEEEeCCcEEEE
Confidence 33322 1 111123588877666544443 5555555433 3333 45678999999999999
Q ss_pred ecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHH
Q 003740 252 SIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGK 331 (799)
Q Consensus 252 ~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~ 331 (799)
++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|..++. ||+||.|.+|+++++|+++|.+|.+++
T Consensus 337 ~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~-~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~ 414 (834)
T PRK10671 337 PLADVQPGMLLRLTTGDRVPVDGEITQGEA-WLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSR 414 (834)
T ss_pred EHHHcCCCCEEEEcCCCEeeeeEEEEEceE-EEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHH
Confidence 999999999999999999999999999975 999999999999999999885 999999999999999999999999999
Q ss_pred HHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 003740 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 411 (799)
Q Consensus 332 i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva 411 (799)
|.+++++++..++|+|+.+++++.+|.+++++++++++++|++. +. + ..+...+..++++++++
T Consensus 415 i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~--------~~---~-----~~~~~~~~~a~~vlv~a 478 (834)
T PRK10671 415 IIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF--------GP---A-----PQIVYTLVIATTVLIIA 478 (834)
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CC---c-----hHHHHHHHHHHHHHHHh
Confidence 99999999989999999999999999999999999888877431 00 0 12455778899999999
Q ss_pred hCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCC
Q 003740 412 VPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGS 491 (799)
Q Consensus 412 ~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 491 (799)
|||+|++++|+++..++++++++|+|+|+++++|+|+++|++|||||||||+|+|+|.+++..+..
T Consensus 479 cPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-------------- 544 (834)
T PRK10671 479 CPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-------------- 544 (834)
T ss_pred cccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred CCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEe
Q 003740 492 SIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIEL 571 (799)
Q Consensus 492 ~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~ 571 (799)
++ .+++..+...++. +.||+++|+++++...... ...+|..... .++....
T Consensus 545 --~~--~~~l~~a~~~e~~-------------s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~~g-~Gv~~~~ 595 (834)
T PRK10671 545 --DE--AQALRLAAALEQG-------------SSHPLARAILDKAGDMTLP-----------QVNGFRTLRG-LGVSGEA 595 (834)
T ss_pred --CH--HHHHHHHHHHhCC-------------CCCHHHHHHHHHHhhCCCC-----------CcccceEecc-eEEEEEE
Confidence 11 1223222233221 6799999999987533211 1122332222 2332223
Q ss_pred CCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCccee
Q 003740 572 PEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTC 651 (799)
Q Consensus 572 ~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~ 651 (799)
++. .++.|+++.+.... +. ...+.+.++.+..+|.+++.+++ +..+
T Consensus 596 ~g~---~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~~~v~va~----------------~~~~ 641 (834)
T PRK10671 596 EGH---ALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGATPVLLAV----------------DGKA 641 (834)
T ss_pred CCE---EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCCeEEEEEE----------------CCEE
Confidence 332 24558888663311 11 12355667778889999998874 4578
Q ss_pred eeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEE
Q 003740 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA 731 (799)
Q Consensus 652 lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~a 731 (799)
+|++++.|++|||++++|+.|++.|+++.|+|||+..+|.++|+++||.. +++
T Consensus 642 ~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------~~~ 694 (834)
T PRK10671 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------VIA 694 (834)
T ss_pred EEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------EEe
Confidence 99999999999999999999999999999999999999999999999964 999
Q ss_pred ecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 732 RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 732 r~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+..|++|.++++.++.+ |+.|+|+|||.||+|||++|||||+|| +|++.++++||+ |+..|.+++
T Consensus 695 ~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 695 GVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADAL 764 (834)
T ss_pred CCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999 999999999999 898888775
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-74 Score=657.51 Aligned_cols=442 Identities=39% Similarity=0.593 Sum_probs=387.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecc
Q 003740 209 SILLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (799)
Q Consensus 209 ~illv~~~~~~~~~~~~~~~~~l~~-~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS 287 (799)
++++..+++...+++.++..+++.+ ..++..++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 4455666777777777777877776 3567799999999 999999999999999999999999999999996 699999
Q ss_pred cccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHH-HHHHHHHHHHHH
Q 003740 288 SLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAV 366 (799)
Q Consensus 288 ~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~~~~~~l~~a~ 366 (799)
+|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|+|.++++++ .++.++.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998886 99999999999999999999999999999999888887899999999999 788888888888
Q ss_pred HHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhc
Q 003740 367 VTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446 (799)
Q Consensus 367 l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~ 446 (799)
+++++|+..+.. .. .+...|..++++++++|||+||+++|+++..+..+|.++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~~------------~~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~ 226 (499)
T TIGR01494 162 AVFLFWAIGLWD------------PN---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEE 226 (499)
T ss_pred HHHHHHHHHHcc------------cc---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhh
Confidence 888776543210 00 255788999999999999999999999999999999999999999999999
Q ss_pred cCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCC
Q 003740 447 MGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT 526 (799)
Q Consensus 447 lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~ 526 (799)
||+++++|||||||||+|+|+|.++++.+. .+.++|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~h 262 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGH 262 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCC
Confidence 999999999999999999999998875321 012789
Q ss_pred chHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCH
Q 003740 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNE 606 (799)
Q Consensus 527 p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~ 606 (799)
|.|+|+++++.... +...||++.+++|+++++.+++ .++||+++.+++.|..
T Consensus 263 p~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------- 314 (499)
T TIGR01494 263 PDERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------- 314 (499)
T ss_pred hHHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------------
Confidence 99999999886421 2468999999999998875333 4789999999988853
Q ss_pred HHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCC
Q 003740 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 686 (799)
Q Consensus 607 ~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~ 686 (799)
+.+..+.++.+|+|++++|++ .+++|+++++|++||+++++|+.|+++|++++|+|||+
T Consensus 315 -----~~~~~~~~~~~g~~~~~~a~~----------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~ 373 (499)
T TIGR01494 315 -----LEEKVKELAQSGLRVLAVASK----------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDN 373 (499)
T ss_pred -----HHHHHHHHHhCCCEEEEEEEC----------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCC
Confidence 122344577899999999963 26899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhh
Q 003740 687 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (799)
Q Consensus 687 ~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL 766 (799)
..+|.++|+++|| +++++|+||.++|+.+|+. |+.|+|+|||+||+|||
T Consensus 374 ~~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al 422 (499)
T TIGR01494 374 VLTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPAL 422 (499)
T ss_pred HHHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHH
Confidence 9999999999996 4889999999999999999 99999999999999999
Q ss_pred hcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 767 HEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 767 ~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
++|||||||| |+++||+ |+.++..++
T Consensus 423 ~~Advgia~~------a~~~adivl~~~~l~~i~~~~ 453 (499)
T TIGR01494 423 KKADVGIAMG------AKAAADIVLLDDNLSTIVDAL 453 (499)
T ss_pred HhCCCccccc------hHHhCCeEEecCCHHHHHHHH
Confidence 9999999997 7999999 788887765
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-73 Score=661.62 Aligned_cols=487 Identities=28% Similarity=0.386 Sum_probs=400.4
Q ss_pred HHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCC-eEEEEecCCCCc
Q 003740 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDLLP 258 (799)
Q Consensus 180 ~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g-~~~~i~~~~Lvv 258 (799)
.++++++++++ .|.++..+++++++..++....+++.++...++.+ ..+..++|+|+| ++++|+.++|+|
T Consensus 6 ~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 6 ALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCC
Confidence 34445555554 35566666666666666666666666666666655 456689999995 999999999999
Q ss_pred ccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcC
Q 003740 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (799)
Q Consensus 259 GDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (799)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|..++. ||+||.+.+|.++++|+++|.+|++|++.+.+.+
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~ 154 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEE 154 (556)
T ss_pred CCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCE-EeeceEECCceEEEEEEEecccCHHHHHHHHHHH
Confidence 99999999999999999999985 999999999999999998875 9999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhH
Q 003740 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (799)
Q Consensus 339 ~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lpl 418 (799)
...+++|+|+.+++++.++.++++++++++|++|++... . ..+..++++++++|||+||+
T Consensus 155 ~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-------------------~-~~~~~~~~vlv~~~P~al~l 214 (556)
T TIGR01525 155 AQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-------------------L-GALYRALAVLVVACPCALGL 214 (556)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------c-hHHHHHHHHHhhccccchhe
Confidence 888899999999999999999999999998887643210 0 46788999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHH
Q 003740 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (799)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (799)
++|++++.++++|.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+... ...++.+
T Consensus 215 ~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~~~~~~l 281 (556)
T TIGR01525 215 ATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------ISEEELL 281 (556)
T ss_pred hhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------ccHHHHH
Confidence 999999999999999999999999999999999999999999999999999987653221 0011222
Q ss_pred HHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEE
Q 003740 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRV 578 (799)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~ 578 (799)
.+ +... + ..+.||+++|+++++.+.+.+... +| + ....++.++..
T Consensus 282 ~~---a~~~------e-------~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~----~----~~~~~~~gi~~ 326 (556)
T TIGR01525 282 AL---AAAL------E-------QSSSHPLARAIVRYAKKRGLELPK-----------QE----D----VEEVPGKGVEA 326 (556)
T ss_pred HH---HHHH------h-------ccCCChHHHHHHHHHHhcCCCccc-----------cc----C----eeEecCCeEEE
Confidence 22 1111 1 126799999999999877654211 11 0 01234556777
Q ss_pred EEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeeccc
Q 003740 579 HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658 (799)
Q Consensus 579 ~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 658 (799)
+++|+++..+..|+.. ..++.. ...++..++.++.+|++++.++ .|.+++|.+.++
T Consensus 327 ~~~g~~~~~lg~~~~~-~~~~~~-------~~~~~~~~~~~~~~g~~~~~v~----------------~~~~~~g~i~~~ 382 (556)
T TIGR01525 327 TVDGQEEVRIGNPRLL-ELAAEP-------ISASPDLLNEGESQGKTVVFVA----------------VDGELLGVIALR 382 (556)
T ss_pred EECCeeEEEEecHHHH-hhcCCC-------chhhHHHHHHHhhCCcEEEEEE----------------ECCEEEEEEEec
Confidence 7777667777777632 111111 1112345567788999999887 356899999999
Q ss_pred CCCcccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 659 DPMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aG-I~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
|++|||++++|+.|+++| +++.|+|||+..++.++++++||.. +|++..|+|
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~ 435 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPED 435 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHH
Confidence 999999999999999999 9999999999999999999999964 899999999
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|..+++.+++. |+.|+|+|||.||+||+++||||++|| ++++.++++||+ |++.|.+++
T Consensus 436 K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 436 KLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred HHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 99999999998 999999999999999999999999999 999999999999 899888775
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-72 Score=644.05 Aligned_cols=466 Identities=28% Similarity=0.348 Sum_probs=381.9
Q ss_pred HHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCc
Q 003740 179 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLP 258 (799)
Q Consensus 179 l~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~Lvv 258 (799)
+.++++++++++ .|+|+..+++.+++..+++...+++.++..+++.+ ..+..++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445556666554 48899777666666666666666666666666665 456689999999999999999999
Q ss_pred ccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcC
Q 003740 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (799)
Q Consensus 259 GDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (799)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|..++. +|+||.+.+|+++++|+++|.+|.+|+|.+++.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCE-EEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 99999999999999999999975 999999999999999998875 9999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhH
Q 003740 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (799)
Q Consensus 339 ~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lpl 418 (799)
.+.+++|+|+.+++++.++.++.++++++++++|.+. . . +...+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------~----~~~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL---K------------R----WPFWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c------------c----cHHHHHHHHHHHhhcCcccccc
Confidence 8888999999999999999999998888777765321 0 0 1126778999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHH
Q 003740 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (799)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (799)
++|+++..++++|.++|+++|+++++|++|++|++|||||||||+|+|+|.+++.. +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999887531 222
Q ss_pred HHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce--EEEEEEeCCCcE
Q 003740 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ--MGVVIELPEGGF 576 (799)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~--~~vv~~~~~~~~ 576 (799)
... ... + ..+.||+++|+++++.+.+ +|++.+.. .++.....+..+
T Consensus 274 ~~a---~~~------e-------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~~g~gi~~~~~g~~~ 321 (536)
T TIGR01512 274 RLA---AAA------E-------QASSHPLARAIVDYARKRE----------------NVESVEEVPGEGVRAVVDGGEV 321 (536)
T ss_pred HHH---HHH------h-------ccCCCcHHHHHHHHHHhcC----------------CCcceEEecCCeEEEEECCeEE
Confidence 222 111 1 1277999999999987653 12221111 122222223322
Q ss_pred EEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeec
Q 003740 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (799)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~ 656 (799)
. .|+++.+... + + ..+..+|.+++.++ .|..++|.+.
T Consensus 322 ~---ig~~~~~~~~--------~----~------------~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 322 R---IGNPRSLEAA--------V----G------------ARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred E---EcCHHHHhhc--------C----C------------cchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 2 3665433211 1 0 03455677766654 4678999999
Q ss_pred ccCCCcccHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 657 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI-~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
++|++|||++++|+.|+++|+ ++.|+|||+..+|.++++++||.. +|++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999965 8899999
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
++|..+++.++++ ++.|+|+|||.||+||+++||+|++||.+|++.++++||+ +++.+.+.+
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 9999999999999 9999999999999999999999999997799999999999 888887654
|
. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-71 Score=605.20 Aligned_cols=587 Identities=25% Similarity=0.334 Sum_probs=447.6
Q ss_pred CCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHH
Q 003740 134 DGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV 213 (799)
Q Consensus 134 ~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv 213 (799)
.|.. ++.++..-...||.|.+..+ ..+|-.++.+....|++.+..+|..+++.- +.||.+. +.++++
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCLD--------eyWYySl---FtLfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCLD--------EYWYYSL---FTLFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHhH--------HHHHHHH---HHHHHH
Confidence 5676 44456666667999999654 567999999988888888877777665542 2577664 445555
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-hcCceeEEEeCCeEEEEecCCCCcccEEEecC---CCeecccEEEEeeceeEEecccc
Q 003740 214 VFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCM---GDQVPADGLFVSGFSVLINESSL 289 (799)
Q Consensus 214 ~~~~~~~~~~~~~~~~~l~~~-~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~---Gd~vPaDg~ll~g~~l~vDeS~l 289 (799)
+.+++..-+++.+....+.+. ..+..+.|+|+++|+.+...||.|||+|.|.. ...||||.+++.|+ |.|||+||
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhh
Confidence 666776667777776666653 35678999999999999999999999999977 56899999999996 79999999
Q ss_pred cCCCCccccCC----------------CCCEEEccceee-------------eceEEEEEEEEcccchhHHHHHhhcCCC
Q 003740 290 TGESEPVNVNA----------------LNPFLLSGTKVQ-------------NGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (799)
Q Consensus 290 TGEs~pv~k~~----------------~~~~v~sGt~v~-------------~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (799)
||||.|..|.+ +..++|.||+++ +|.+.+.|++||.+|..|++++.+....
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 99999999841 234789999996 6889999999999999999999988765
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHH
Q 003740 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (799)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav 420 (799)
++-|.-. +=+.+| ++.+++|.+....|.|..-.... ..+-...|.-++-|+...+|.-||+-+
T Consensus 387 ervTaNn----~Etf~F-----ILFLlVFAiaAa~Yvwv~Gskd~--------~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 387 ERVTANN----RETFIF-----ILFLLVFAIAAAGYVWVEGSKDP--------TRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeeeecc----HHHHHH-----HHHHHHHHHHhhheEEEecccCc--------chhhhheeeeeeEEEeccCCCCCchhh
Confidence 5534221 112222 23334444444444332211110 012224455567777788999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 003740 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (799)
Q Consensus 421 ~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (799)
+++.-.+...|.|.+++|..+-.+.-.|++|..|||||||||+..|.|..+--.... .......+..+.+....
T Consensus 450 SmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~v 523 (1160)
T KOG0209|consen 450 SMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVLV 523 (1160)
T ss_pred hHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHHH
Confidence 999999999999999999999999999999999999999999999999887542211 00011122333344443
Q ss_pred HHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHc---CC---ChHHHhhhcceEEEecCCCCCceEEEEEEeCC-
Q 003740 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL---GG---DFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 573 (799)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~---g~---~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~- 573 (799)
+ +.|++-... + + ...|+|.|+|.+++.... +. ..+..-+..+|.+.+.|+|.-|||+++....+
T Consensus 524 l----AscHsLv~l-e-~---~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~ 594 (1160)
T KOG0209|consen 524 L----ASCHSLVLL-E-D---KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGP 594 (1160)
T ss_pred H----HHHHHHHHh-c-C---cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccC
Confidence 3 233321111 1 1 269999999999875211 10 00111124678899999999999999987643
Q ss_pred ---CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC-----CCCCCCCC
Q 003740 574 ---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE-----FSADAPIP 645 (799)
Q Consensus 574 ---~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~-----~~~~~~~~ 645 (799)
..+.+.+|||||.|-.+-. +....+++...+|+.+|.||+|++||+++.- .+.+++..
T Consensus 595 g~s~k~~~aVKGAPEvi~~ml~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~v 660 (1160)
T KOG0209|consen 595 GSSEKYFVAVKGAPEVIQEMLR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDV 660 (1160)
T ss_pred CCceEEEEEecCCHHHHHHHHH--------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhh
Confidence 2577889999999977644 2335678889999999999999999999842 12345678
Q ss_pred CCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----------------------
Q 003740 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN---------------------- 703 (799)
Q Consensus 646 ~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~---------------------- 703 (799)
|.+|+|.|++.|.-|+|||++++|+.|++++.+|+|+||||+.||.++|+++||....
T Consensus 661 EsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~ 740 (1160)
T KOG0209|consen 661 ESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDG 740 (1160)
T ss_pred hhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCC
Confidence 9999999999999999999999999999999999999999999999999999997531
Q ss_pred -------------------ceeecchhhhccCH-HHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCH
Q 003740 704 -------------------GIAIEGPEFREKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763 (799)
Q Consensus 704 -------------------~~~~~g~~~~~~~~-~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDa 763 (799)
+++++|+.+..+.. +.+.++++++.||||++|.||..++..|++. |++++|||||+||.
T Consensus 741 t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 741 TIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDV 819 (1160)
T ss_pred ceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcch
Confidence 15667777776543 4678889999999999999999999999999 99999999999999
Q ss_pred HhhhcCCeeeecCCCCCHH
Q 003740 764 PALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 764 pAL~~AdVGiamgi~gtev 782 (799)
.|||+||||||+- ++++-
T Consensus 820 GALK~AhVGVALL-~~~~e 837 (1160)
T KOG0209|consen 820 GALKQAHVGVALL-NNPEE 837 (1160)
T ss_pred hhhhhcccceehh-cCChh
Confidence 9999999999998 66663
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-66 Score=613.81 Aligned_cols=627 Identities=24% Similarity=0.334 Sum_probs=485.0
Q ss_pred HHHhcCCCccCCCCCcc--H-HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 003740 146 RKEIYGINKFTESPARG--F-WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (799)
Q Consensus 146 r~~~~g~N~~~~~~~~~--f-~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~ 222 (799)
+...|-.|.+...+... | -+.+|+||+...++.+++.+++++++ +.+ .++| ..++++++++.++++++.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~----~~~~---~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP----FNPY---TTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc----cCcc---ceeeceeeeehHHHHHHH
Confidence 34478889888765433 3 47899999999999999999999987 532 2333 345677888889999999
Q ss_pred HHHHHHHHHhhhhcCceeEEEeCCe-EEEEecCCCCcccEEEecCCCeecccEEEEeece----eEEecccccCCCCccc
Q 003740 223 KQSLQFKDLDREKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVN 297 (799)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~R~g~-~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~----l~vDeS~lTGEs~pv~ 297 (799)
.+...+.+.+++.++.++.|.|++. ..+..|++|+|||+|.+..++.+|||.++++++. |+|+++.|+||+....
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999999875 9999999999998876
Q ss_pred cC----------------------------------------------CCCCEEEccceeeec-eEEEEEEEEcccchhH
Q 003740 298 VN----------------------------------------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWG 330 (799)
Q Consensus 298 k~----------------------------------------------~~~~~v~sGt~v~~G-~~~~~V~~vG~~T~~g 330 (799)
|. ..++.++.|+++.+. .+.+.|+.+|.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 61 012357888888885 6899999999999
Q ss_pred HHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCC-cccc-CCc-chHHHHHHHHHHHHH
Q 003740 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT-HWTW-SGD-DALEILEFFAIAVTI 407 (799)
Q Consensus 331 ~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~av~i 407 (799)
|++..-..+..+++++++.+|.....+..+.++++++..+... .+........ .+++ ... ........|+.++.+
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFA--IWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhh--eeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 5555666688888999999988766666555555544433321 1111111111 1222 222 112344566777788
Q ss_pred HHHHhCCchhHHHHHHHHHHHHHHh----------hhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCee
Q 003740 408 VVVAVPEGLPLAVTLSLAFAMKKMM----------NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (799)
Q Consensus 408 lvva~P~~Lplav~l~l~~~~~~l~----------~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (799)
+...+|..|...+.+.-.+...-+. ...+.+|..+.-|.||++++|.+|||||||+|.|++.++.+.+..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999988887766654333 235778999999999999999999999999999999999998876
Q ss_pred eeecCCCC----------------------CC------CCCCCCChhHHHHHHHHHHhcCCceEEecCC--CceEEcCCc
Q 003740 478 KEVDNSKG----------------------TP------AFGSSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTP 527 (799)
Q Consensus 478 ~~~~~~~~----------------------~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~~~~~~g~p 527 (799)
|....+.. .+ ...+.........+..++++|++...+.+++ ...+...+|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 64332110 00 0011112334445667888888877776333 245668999
Q ss_pred hHHHHHHHHHHcCCChHH------------HhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccccc
Q 003740 528 TETAILEFGLLLGGDFQA------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (799)
Q Consensus 528 ~e~All~~~~~~g~~~~~------------~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (799)
.|.|++..|+..|..+.. ....++++++.+|+|.||||||+++.+++.+.++||||..+|.++++.
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~-- 572 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK-- 572 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh--
Confidence 999999999999876422 134789999999999999999999999999999999999999999874
Q ss_pred ccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCC---------------C-------CCCCCCCCcceeee
Q 003740 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF---------------S-------ADAPIPTEGYTCIG 653 (799)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~---------------~-------~~~~~~~~~~~~lg 653 (799)
-.+..++.-.++++.||.+|+||+|+|||++++++ . +..+.+|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 23455666778999999999999999999998651 0 01145689999999
Q ss_pred eecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------------
Q 003740 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------- 704 (799)
Q Consensus 654 ~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~----------------------------- 704 (799)
..+++|++++||+++|+.|++||||+||+|||..+||..||..|+++.++.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999987532
Q ss_pred ------------------eeecchhhhccCHHH----Hhhhc--CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCc
Q 003740 705 ------------------IAIEGPEFREKSDEE----LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760 (799)
Q Consensus 705 ------------------~~~~g~~~~~~~~~~----~~~~~--~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~ 760 (799)
+|++|+.+....+.+ +.++. ++..++||+||.||..+|+..++..+.+++.+|||.
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 344455444332221 22222 567799999999999999999876799999999999
Q ss_pred cCHHhhhcCCeeeecCCCCCHH--HHHhcCC---ChHhHHHh
Q 003740 761 NDAPALHEADIGLAMGIAGTEV--ELECCCF---NFSSRKTY 797 (799)
Q Consensus 761 NDapAL~~AdVGiamgi~gtev--ak~aaDi---nf~si~~~ 797 (799)
||.+|+++||||| ||+|.|. |..+||+ -|.-+-+.
T Consensus 805 NDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaqFrfL~rL 844 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQFRFLERL 844 (1151)
T ss_pred ccchheeeCCcCe--eeccchhhhhhhcccchHHHHHHHhhh
Confidence 9999999999999 8888887 8888998 55544443
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-66 Score=559.16 Aligned_cols=605 Identities=22% Similarity=0.329 Sum_probs=456.5
Q ss_pred HHHhcCCCccCCCCCc--cH-HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 003740 146 RKEIYGINKFTESPAR--GF-WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (799)
Q Consensus 146 r~~~~g~N~~~~~~~~--~f-~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~ 222 (799)
++.+|-+|.+...+.. +| ...++++|+...+.++++.++..++..+.. |....|+ .++.++.+++.+.+.
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g~l~ty~------~pl~fvl~itl~kea 147 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-GYLSTYW------GPLGFVLTITLIKEA 147 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-cchhhhh------HHHHHHHHHHHHHHH
Confidence 4467888888766533 33 456778888888888888888777766543 3322222 233334444555566
Q ss_pred HHHHHHHHHhhhhcCceeEEE-eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeec----eeEEecccccCCCCccc
Q 003740 223 KQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF----SVLINESSLTGESEPVN 297 (799)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~-R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~----~l~vDeS~lTGEs~pv~ 297 (799)
.++.+++.-+++.++...+++ |+|.... ++++|.|||+|.+..+++||||.+++..+ ++.|.+-.|+||++...
T Consensus 148 vdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 148 VDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 555555555555555556666 7776555 99999999999999999999999999865 38999999999999766
Q ss_pred cC----------------------------------------------CCCCEEEccceeeeceEEEEEEEEcccchhHH
Q 003740 298 VN----------------------------------------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGK 331 (799)
Q Consensus 298 k~----------------------------------------------~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~ 331 (799)
|- .-++.++++|.+.+|.+.+.|++||.+|.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 50 01357999999999999999999999994
Q ss_pred HHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 003740 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 411 (799)
Q Consensus 332 i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva 411 (799)
-+.+-..+..+---++..+|.+.+++....++++++.... .|... .|..+++..+.++-..
T Consensus 304 svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~-----------~g~~~--------~wyi~~~RfllLFS~I 364 (1051)
T KOG0210|consen 304 SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM-----------KGFGS--------DWYIYIIRFLLLFSSI 364 (1051)
T ss_pred HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh-----------hcCCC--------chHHHHHHHHHHHhhh
Confidence 3334445555556677788999888877766666543221 11111 2334556666677777
Q ss_pred hCCchhHHHHHHHHHHHHHHhhh----hhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCC---
Q 003740 412 VPEGLPLAVTLSLAFAMKKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK--- 484 (799)
Q Consensus 412 ~P~~Lplav~l~l~~~~~~l~~~----~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~--- 484 (799)
+|..|-.-+.++..+-...+.++ |.+||....-|.||++.++.+|||||||+|.|.+.++..+.-.+..+...
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~ 444 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVS 444 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHH
Confidence 99999999999988888888876 66799999999999999999999999999999999999875443321100
Q ss_pred ------------CCC----CCCCCCChhHHHHHHHHHHhcCCceEEecCCC-ceEEcCCchHHHHHHHHHHcCCChHH--
Q 003740 485 ------------GTP----AFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGGDFQA-- 545 (799)
Q Consensus 485 ------------~~~----~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~g~p~e~All~~~~~~g~~~~~-- 545 (799)
... .....++..+.. +.+++++|++.....+++| ..+...+|.|.||++|....|+..-.
T Consensus 445 ~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~-~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd 523 (1051)
T KOG0210|consen 445 QHIQSLYTPGRNKGKGALSRVKKDMSARVRN-AVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRD 523 (1051)
T ss_pred HHHHHhhCCCcccccccchhhcCcccHHHHH-HHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecc
Confidence 000 011223333333 3467777777766666654 44668899999999999877764211
Q ss_pred -----------HhhhcceEEEecCCCCCceEEEEEEeC-CCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHH
Q 003740 546 -----------ERQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (799)
Q Consensus 546 -----------~~~~~~i~~~~~F~s~~k~~~vv~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (799)
...+++|+.++||+|+.||||++++.+ .+.+..|.|||.-++-+.- +| .+.++
T Consensus 524 ~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q~--------------NdWle 588 (1051)
T KOG0210|consen 524 RHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-QY--------------NDWLE 588 (1051)
T ss_pred cceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-cc--------------chhhh
Confidence 223789999999999999999999976 5789999999965543332 21 13567
Q ss_pred HHHHHHHHhccceeeEEEEEcCCCCCC--------------C---------CCCCCCcceeeeeecccCCCcccHHHHHH
Q 003740 614 ETIEKFASEALRTLCLACMEIGNEFSA--------------D---------APIPTEGYTCIGIVGIKDPMRPGVKESVA 670 (799)
Q Consensus 614 ~~~~~~a~~g~r~l~~a~~~~~~~~~~--------------~---------~~~~~~~~~~lg~~~~~D~~R~~v~~aI~ 670 (799)
+...+||.+|+|++.+|.|.++.++-+ + ...+|.|+.++|+.|.+|.++++|+.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 778899999999999999999865100 0 12568999999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------------eeecchhhhc---cCHHH
Q 003740 671 ICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------IAIEGPEFRE---KSDEE 719 (799)
Q Consensus 671 ~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~----------------------------~~~~g~~~~~---~~~~~ 719 (799)
.||+|||+|||+|||..+||..||+..++...+. ++++|+.+.- .-++|
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~E 748 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDE 748 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHH
Confidence 9999999999999999999999999999986542 7788877653 34567
Q ss_pred Hhhhc--CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHH--HHHhcCC---ChH
Q 003740 720 LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV--ELECCCF---NFS 792 (799)
Q Consensus 720 ~~~~~--~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtev--ak~aaDi---nf~ 792 (799)
+.++. ....|+|||+|.||+++++.+|++.|..|+.+|||-||..|+++||+|| ||-|.|. |.-|||. .|+
T Consensus 749 f~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItqF~ 826 (1051)
T KOG0210|consen 749 FIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQFS 826 (1051)
T ss_pred HHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHHHH
Confidence 76655 3456999999999999999999988999999999999999999999999 8888887 7778898 787
Q ss_pred hHHHhh
Q 003740 793 SRKTYI 798 (799)
Q Consensus 793 si~~~i 798 (799)
-+-+.+
T Consensus 827 Hv~rLL 832 (1051)
T KOG0210|consen 827 HVSRLL 832 (1051)
T ss_pred HHHHHh
Confidence 776655
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=525.85 Aligned_cols=473 Identities=27% Similarity=0.396 Sum_probs=371.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeC-CeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEeccc
Q 003740 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 288 (799)
Q Consensus 210 illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~-g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~ 288 (799)
+++..+.+++.+.+-..|...|.+......++++++ |..+.|++.+|..||+|.|..||.||+||.+++|.. +||||.
T Consensus 76 VlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESA 154 (681)
T COG2216 76 VLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESA 154 (681)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhh
Confidence 333334455566665666666666555556777775 899999999999999999999999999999999986 999999
Q ss_pred ccCCCCccccCCCCCE--EEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 003740 289 LTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAV 366 (799)
Q Consensus 289 lTGEs~pv~k~~~~~~--v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~ 366 (799)
+||||.||-|..+..+ |-.||.+++.++++++++...+|.+.++..+++.++.+|||-+.-++ +...++.+..
T Consensus 155 ITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~-----iLL~~LTliF 229 (681)
T COG2216 155 ITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALT-----ILLSGLTLIF 229 (681)
T ss_pred ccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHH-----HHHHHHHHHH
Confidence 9999999999877433 89999999999999999999999999999999999999999665443 3333332222
Q ss_pred HHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhc
Q 003740 367 VTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446 (799)
Q Consensus 367 l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~ 446 (799)
++.++. .|.+..+..+. . -.+..-++++|+.+|-.++-.++..=..+|.|+.+.|++-++..|+|.
T Consensus 230 L~~~~T--l~p~a~y~~g~-------~-----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEa 295 (681)
T COG2216 230 LLAVAT--LYPFAIYSGGG-------A-----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295 (681)
T ss_pred HHHHHh--hhhHHHHcCCC-------C-----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhh
Confidence 211111 11111111111 0 113456788999999988877777777899999999999999999999
Q ss_pred cCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCC
Q 003740 447 MGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT 526 (799)
Q Consensus 447 lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~ 526 (799)
.|.+|++..|||||+|.|+-.-.++++.+... ..+ +..+..+++ +. -..
T Consensus 296 aGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~------------------~~~-la~aa~lsS---l~---------DeT 344 (681)
T COG2216 296 AGDVDTLLLDKTGTITLGNRQASEFIPVPGVS------------------EEE-LADAAQLAS---LA---------DET 344 (681)
T ss_pred cCCccEEEecccCceeecchhhhheecCCCCC------------------HHH-HHHHHHHhh---hc---------cCC
Confidence 99999999999999999987777776654431 111 222222221 21 336
Q ss_pred chHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCH
Q 003740 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNE 606 (799)
Q Consensus 527 p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~ 606 (799)
|..+.++.++++++.+.+...... -....||+.+.+++++-. +++ +-.-||+.+.+....+ ..+...|
T Consensus 345 pEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~----~~~g~~p--- 412 (681)
T COG2216 345 PEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVR----ERGGHIP--- 412 (681)
T ss_pred CCcccHHHHHHHhccCCCcccccc-cceeeecceecccccccC--CCC--ceeecccHHHHHHHHH----hcCCCCC---
Confidence 888999999998876543322111 346789999888888743 333 5567999999987654 2232222
Q ss_pred HHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCC
Q 003740 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 686 (799)
Q Consensus 607 ~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~ 686 (799)
..++...++-++.|-..++++ .|..++|++.++|-++||.+|=+.+||+.||+.+|+||||
T Consensus 413 ---~~l~~~~~~vs~~GGTPL~V~----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN 473 (681)
T COG2216 413 ---EDLDAAVDEVSRLGGTPLVVV----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDN 473 (681)
T ss_pred ---HHHHHHHHHHHhcCCCceEEE----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCC
Confidence 457777888899998888886 5778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhh
Q 003740 687 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (799)
Q Consensus 687 ~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL 766 (799)
+.||.+||+|.|++. ..|.++|+||..+|+.-|.+ |+.|||||||+||||||
T Consensus 474 ~~TAa~IA~EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPAL 525 (681)
T COG2216 474 PLTAAAIAAEAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPAL 525 (681)
T ss_pred HHHHHHHHHHhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhh
Confidence 999999999999976 88999999999999999999 99999999999999999
Q ss_pred hcCCeeeecCCCCCHHHHHhcCC-ChHh
Q 003740 767 HEADIGLAMGIAGTEVELECCCF-NFSS 793 (799)
Q Consensus 767 ~~AdVGiamgi~gtevak~aaDi-nf~s 793 (799)
++||||+||. +||..||||+.+ |..|
T Consensus 526 AqAdVg~AMN-sGTqAAkEAaNMVDLDS 552 (681)
T COG2216 526 AQADVGVAMN-SGTQAAKEAANMVDLDS 552 (681)
T ss_pred hhcchhhhhc-cccHHHHHhhcccccCC
Confidence 9999999999 999999999998 4433
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=303.15 Aligned_cols=222 Identities=33% Similarity=0.553 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe-eceeEEe
Q 003740 207 VMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS-GFSVLIN 285 (799)
Q Consensus 207 ~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~-g~~l~vD 285 (799)
++.+++..++..+.+++.++..+++.+...+..++|+|||+++++++.||+|||+|.|++||++||||++++ |. +.||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~vd 81 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEEE
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-cccc
Confidence 444555566677777777777777776555545999999999999999999999999999999999999999 64 7999
Q ss_pred cccccCCCCccccC-----CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHH
Q 003740 286 ESSLTGESEPVNVN-----ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360 (799)
Q Consensus 286 eS~lTGEs~pv~k~-----~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~ 360 (799)
||.+|||+.|+.|. . ++++|+||.+.+|++.++|++||.+|..|++.+.+.+....++++++.+++++.++.++
T Consensus 82 ~s~ltGes~pv~k~~~~~~~-~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNP-GNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCT-TTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc-cchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 99999999999998 5 45799999999999999999999999999999999888888899999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcc
Q 003740 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRH 440 (799)
Q Consensus 361 ~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~ 440 (799)
.+++++++++++++. . ...++...|..++++++++|||+||+++++++.+++++|.++|+++|+
T Consensus 161 ~~~~~~~~~~~~~~~------~----------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~ 224 (230)
T PF00122_consen 161 ILAIAILVFIIWFFN------D----------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKN 224 (230)
T ss_dssp HHHHHHHHHHHCHTG------S----------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred ccccchhhhccceec------c----------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeC
Confidence 888887776554321 0 011455778889999999999999999999999999999999999999
Q ss_pred cchhhc
Q 003740 441 LAACET 446 (799)
Q Consensus 441 ~~a~E~ 446 (799)
++++|+
T Consensus 225 ~~a~E~ 230 (230)
T PF00122_consen 225 LSALEA 230 (230)
T ss_dssp TTHHHH
T ss_pred cccccC
Confidence 999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=228.65 Aligned_cols=97 Identities=44% Similarity=0.717 Sum_probs=91.7
Q ss_pred cceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCc
Q 003740 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (799)
Q Consensus 648 ~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (799)
+..++|.+.+.||+||+++++|+.|+++|++++|+|||+..+|.++|+++||.. .
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------~ 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------S 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------E
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------c
Confidence 689999999999999999999999999999999999999999999999999943 2
Q ss_pred eEEEec--CcccH--HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCC
Q 003740 728 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (799)
Q Consensus 728 ~v~ar~--sP~dK--~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~Ad 770 (799)
.|+++. +|++| .++++.||.. ++.|+|+|||+||+|||++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 399999 99999 9999999976 679999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.6e-14 Score=127.57 Aligned_cols=122 Identities=21% Similarity=0.298 Sum_probs=106.0
Q ss_pred eeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceE
Q 003740 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (799)
Q Consensus 650 ~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (799)
...+.++---.+=+++++.|++|++. ++|.+.|||...+....|+-.||..+. |
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r-------------------------v 73 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER-------------------------V 73 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------e
Confidence 44566666677789999999999999 999999999999999999999997643 9
Q ss_pred EEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCC--CCCHHHHHhcCC---ChHhHHHhh
Q 003740 730 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI--AGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 730 ~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi--~gtevak~aaDi---nf~si~~~i 798 (799)
||...|+.|..+++.|++. +++|.|+|||.||.+||++||+||..=. ...+-+.++||+ |...++...
T Consensus 74 ~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 74 FAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred ecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 9999999999999999988 9999999999999999999999976531 345667899999 777776653
|
|
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-15 Score=108.94 Aligned_cols=46 Identities=63% Similarity=1.076 Sum_probs=43.5
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhhcccccccccccccccchhhH
Q 003740 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFE 50 (799)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e 50 (799)
|+.++|+ +++||+|+|+++|||+|+++|+|++|||||+++|+|+.|
T Consensus 1 yl~~~Fd-i~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFD-IPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccC-CCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 6789998 999999999999999999999999999999999988875
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.6e-14 Score=123.44 Aligned_cols=87 Identities=38% Similarity=0.604 Sum_probs=71.5
Q ss_pred hcCCceEEecCCCc-eEEcCCchHHHHHHHHHHc--CCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCc
Q 003740 507 NNTGGEVVIGEGNK-TEILGTPTETAILEFGLLL--GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (799)
Q Consensus 507 ~~~~~~~~~~~~~~-~~~~g~p~e~All~~~~~~--g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa 583 (799)
+|+++.+..+.+.. .+..|+|+|.||+.|+... +.+....+..+++++.+||+|++|+|+++++ .++.+.+++|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 45566665544332 3489999999999999998 4567889999999999999999999999998 334577799999
Q ss_pred hHHHHHhcccc
Q 003740 584 SEIILAACDKF 594 (799)
Q Consensus 584 ~e~il~~c~~~ 594 (799)
||.||++|+++
T Consensus 81 ~e~il~~Ct~i 91 (91)
T PF13246_consen 81 PEVILDRCTHI 91 (91)
T ss_pred hHHHHHhcCCC
Confidence 99999999863
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-10 Score=125.61 Aligned_cols=192 Identities=17% Similarity=0.269 Sum_probs=142.1
Q ss_pred CchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC------------------------
Q 003740 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 637 (799)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~------------------------ 637 (799)
|-.+.+...|+.+++.. ...||+...++++.+....-.-.| .|++||||+..-.
T Consensus 698 g~ad~~~eACTdfWdGa-di~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGA-DIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCCc-eeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 56788899999999743 468999999999998888766666 5999999986311
Q ss_pred ---C-C--------C-----CC-----------CCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHH
Q 003740 638 ---F-S--------A-----DA-----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (799)
Q Consensus 638 ---~-~--------~-----~~-----------~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~t 689 (799)
+ + . ++ .....+.+|.|++..+.+.|++....|+.|-++.||.+..|-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 0 0 0 00 01134678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCceeec------------------------------------chh---------------hhccCH-
Q 003740 690 AKAIARECGILTDNGIAIE------------------------------------GPE---------------FREKSD- 717 (799)
Q Consensus 690 A~aiA~~~GI~~~~~~~~~------------------------------------g~~---------------~~~~~~- 717 (799)
.+-.|.++||...+.-.++ ..+ |+.++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 9999999999865431110 000 011100
Q ss_pred --------------HHHhhhcCC----------ceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccC--HHhhhcCCe
Q 003740 718 --------------EELSKLIPK----------IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND--APALHEADI 771 (799)
Q Consensus 718 --------------~~~~~~~~~----------~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~ND--apAL~~AdV 771 (799)
..+.+.-|+ +-.|..++|+.--++|+.+|+. |+||+.+|...|- .-..-+|||
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 000111111 2278899999999999999998 9999999999884 345678999
Q ss_pred eeecC
Q 003740 772 GLAMG 776 (799)
Q Consensus 772 Giamg 776 (799)
+||+-
T Consensus 1015 SialD 1019 (1354)
T KOG4383|consen 1015 SIALD 1019 (1354)
T ss_pred eEEec
Confidence 99874
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.6e-10 Score=113.98 Aligned_cols=121 Identities=19% Similarity=0.166 Sum_probs=91.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
+++|++++.|+.|++.| ++.++||-....+..+++++||..-- ...+.+.. .+... . -..|.+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-----------~~tG~-~--~~~~~~ 132 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-----------RVVGY-Q--LRQKDP 132 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC-----------eeECe-e--ecCcch
Confidence 57999999999999975 99999999999999999999996321 11111100 00000 1 145789
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC-C----ChHhHHHhh
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC-F----NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD-i----nf~si~~~i 798 (799)
|...++.+++. |..+.++|||.||.||++.||+|+++. +.+..+++|| + +++.+.+.|
T Consensus 133 K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~ 195 (203)
T TIGR02137 133 KRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREF 195 (203)
T ss_pred HHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHH
Confidence 99999999877 878999999999999999999999995 5666555554 4 777777655
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.4e-10 Score=93.24 Aligned_cols=68 Identities=25% Similarity=0.524 Sum_probs=63.8
Q ss_pred hhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHH
Q 003740 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186 (799)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is 186 (799)
+..+++++++.|+++...||+.++ +.+|++.||+|.++.++.+++|+.++++|++++.++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 346799999999999999999877 99999999999999999999999999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.2e-09 Score=85.42 Aligned_cols=62 Identities=31% Similarity=0.487 Sum_probs=56.9
Q ss_pred HhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 003740 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190 (799)
Q Consensus 127 ~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~ 190 (799)
.|++++..||+.++ +.+|++.||.|.++.++.+++|+.+|++|+++++++|++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 36788888999876 999999999999999989999999999999999999999999998765
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=9e-09 Score=110.87 Aligned_cols=114 Identities=20% Similarity=0.262 Sum_probs=88.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ce-eecchhhhccCHHHHhhhcCCceEEE-ecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GI-AIEGPEFREKSDEELSKLIPKIQVMA-RSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~-~~~g~~~~~~~~~~~~~~~~~~~v~a-r~sP 735 (799)
++.||+.+.++.|++.|+++.++||.....+..+.+++|+..-. .. +..|.-- -.+.+ -...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt--------------g~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT--------------GNVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE--------------eEecCccCCc
Confidence 57999999999999999999999999988899999999985310 00 0000000 00110 0234
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..|.+.++.+.+++| +.+.++|||.||.+|++.|++|+|| ++.+..|+.||.
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~ 301 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQV 301 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCE
Confidence 689999999987756 6799999999999999999999999 889999999999
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2e-08 Score=101.90 Aligned_cols=111 Identities=24% Similarity=0.287 Sum_probs=90.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-------eecchhhhccCHHHHhhhcCCceEEE
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFREKSDEELSKLIPKIQVMA 731 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~v~a 731 (799)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-.. +++|. +.+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 78899999999999999999999999999999999999999753221 33444 444
Q ss_pred e-cCcccHHHHHHHHHHhCCC---EEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 732 R-SSPMDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 732 r-~sP~dK~~lV~~Lq~~~G~---vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
. +..+.|...++.+.+.+|. .+.++|||.||.|||+.|+.+++.. +.+..+..|+.
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~ 197 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADV 197 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHH
Confidence 3 4448999999888877675 4899999999999999999999884 55555555655
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.9e-08 Score=103.64 Aligned_cols=53 Identities=38% Similarity=0.477 Sum_probs=47.2
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
-.|..-++.|.+.+| +.|+++|||.||.+||+.|++|+||| +|.+.+|++||.
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~ 250 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQF 250 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCe
Confidence 567777777776656 57999999999999999999999999 999999999998
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.3e-08 Score=100.59 Aligned_cols=123 Identities=19% Similarity=0.220 Sum_probs=91.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--cchhhhccCHHHHhhhcCCceEEEe-cCcc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~v~ar-~sP~ 736 (799)
+++|++++.++.|++.|+++.++||.+...+..+.+.+|+..-....+ .+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 579999999999999999999999999999999999999964211000 000000 001111 1234
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHh
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTY 797 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~ 797 (799)
.|..+++.+.+++| +.+.|+||+.||.+|++.|++++++ ++.+..+++||. ||+.+...
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~--~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF--NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe--CCCHHHHHhchhccCCCCHHHHHhh
Confidence 48888887776634 3578999999999999999999988 467889999988 88877654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.5e-08 Score=95.19 Aligned_cols=113 Identities=17% Similarity=0.252 Sum_probs=90.1
Q ss_pred eeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceE
Q 003740 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (799)
Q Consensus 650 ~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (799)
..++.+.+.|. .+|+.|++.|+++.++||++...+..+.+.+|+.. .
T Consensus 24 ~~~~~~~~~~~------~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~ 70 (154)
T TIGR01670 24 EEIKAFNVRDG------YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------L 70 (154)
T ss_pred cEEEEEechhH------HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------E
Confidence 34455545443 29999999999999999999999999999999964 3
Q ss_pred EEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC--------C-hHhHHHh
Q 003740 730 MARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF--------N-FSSRKTY 797 (799)
Q Consensus 730 ~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi--------n-f~si~~~ 797 (799)
+... ..|...++.+.+++| +.+.|+||+.||.+|++.|+++++|. .+.+..+..||. . |..+++.
T Consensus 71 ~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~~ 147 (154)
T TIGR01670 71 YQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCEL 147 (154)
T ss_pred Eecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 3322 457777777765434 67999999999999999999999999 889999999997 2 7776665
Q ss_pred h
Q 003740 798 I 798 (799)
Q Consensus 798 i 798 (799)
+
T Consensus 148 ~ 148 (154)
T TIGR01670 148 L 148 (154)
T ss_pred H
Confidence 4
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1e-07 Score=100.91 Aligned_cols=137 Identities=30% Similarity=0.392 Sum_probs=99.5
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc--------------------------------
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-------------------------------- 704 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-------------------------------- 704 (799)
+.+.++++|+++++.|+++.++||.....+..+.+++|+... |+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999742 11
Q ss_pred --eeecchh---------------------------hhc----------cCH---HH----HhhhcC-CceEEEecCc--
Q 003740 705 --IAIEGPE---------------------------FRE----------KSD---EE----LSKLIP-KIQVMARSSP-- 735 (799)
Q Consensus 705 --~~~~g~~---------------------------~~~----------~~~---~~----~~~~~~-~~~v~ar~sP-- 735 (799)
..+...+ ... ... ++ +.+.++ ....+.+..|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0000000 000 001 11 111222 2233334333
Q ss_pred -------ccHHHHHHHHHHhCCCE---EEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 736 -------MDKHTLVKHLRTTLGEV---VAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 736 -------~dK~~lV~~Lq~~~G~v---Va~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.+|..-++.|.+.+|-. |+++||+.||.+||+.|+.|+||| ++++.+|+.||+ +-..|.++|
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l 257 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEAL 257 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHH
Confidence 58999999998876754 999999999999999999999999 999999999996 555555443
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-07 Score=100.97 Aligned_cols=129 Identities=19% Similarity=0.240 Sum_probs=91.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--cch---------------------
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGP--------------------- 710 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~--~g~--------------------- 710 (799)
..+-+..+++|++|++.|+++.+.||.....+..+.+++|+... |+ .+. .|+
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 35889999999999999999999999999999999999998532 22 000 000
Q ss_pred --------------------hh----------------hcc------------CHHH-------HhhhcC-CceEE----
Q 003740 711 --------------------EF----------------REK------------SDEE-------LSKLIP-KIQVM---- 730 (799)
Q Consensus 711 --------------------~~----------------~~~------------~~~~-------~~~~~~-~~~v~---- 730 (799)
.+ ..+ .+++ +.+.++ ++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 00 000 0011 111111 11111
Q ss_pred --EecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC
Q 003740 731 --ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 731 --ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD 788 (799)
-..+| -.|..-++.|.+.+| +.|+++|||-||.+||+.|+.|+||| +|.+.+|++||
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~ 241 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELP 241 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCC
Confidence 12223 368888888887766 57999999999999999999999999 99999999998
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.1e-07 Score=97.38 Aligned_cols=129 Identities=23% Similarity=0.340 Sum_probs=92.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeecc-hhh--hcc----------------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF--REK---------------- 715 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~~g-~~~--~~~---------------- 715 (799)
.+-|.+.++|++|++.|++++++||.+...+..+++.+++... ++ .+... ... ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998632 22 11110 000 000
Q ss_pred -------------------CHHHHhhhcC--CceEE-----Ee--cCcccHHHHHHHHHHhCC---CEEEEEcCCccCHH
Q 003740 716 -------------------SDEELSKLIP--KIQVM-----AR--SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAP 764 (799)
Q Consensus 716 -------------------~~~~~~~~~~--~~~v~-----ar--~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDap 764 (799)
..+.+.+.+. .+.+. .. ....+|...++.+.+.+| ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011111111 11111 11 224689999998887655 35899999999999
Q ss_pred hhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 765 ALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 765 AL~~AdVGiamgi~gtevak~aaDi 789 (799)
|++.|++|+||+ +|.+.+|+.||+
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~ 201 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADY 201 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCE
Confidence 999999999999 999999999997
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-07 Score=98.08 Aligned_cols=139 Identities=28% Similarity=0.345 Sum_probs=99.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-----------------------------
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG----------------------------- 704 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~----------------------------- 704 (799)
...+-|.+.+++++++++|+++.+.||.....+..+..++++... ++
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345679999999999999999999999999999999999998621 11
Q ss_pred -------------eeecch---hhh-----------------------------ccCH-------HHHhhhcCCceEEEe
Q 003740 705 -------------IAIEGP---EFR-----------------------------EKSD-------EELSKLIPKIQVMAR 732 (799)
Q Consensus 705 -------------~~~~g~---~~~-----------------------------~~~~-------~~~~~~~~~~~v~ar 732 (799)
...... ... ...+ +++.+.++....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 000000 000 0001 122333333212222
Q ss_pred -------cCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC------ChHhH
Q 003740 733 -------SSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF------NFSSR 794 (799)
Q Consensus 733 -------~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi------nf~si 794 (799)
.+| .+|..-++.|.+.+| +.++++||+.||.+||+.|+.|+||| ++++..|+.||. + ..|
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~-~gv 250 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNND-DGV 250 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTC-THH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCC-ChH
Confidence 223 799999999987655 58899999999999999999999999 999999999998 4 666
Q ss_pred HHhh
Q 003740 795 KTYI 798 (799)
Q Consensus 795 ~~~i 798 (799)
+++|
T Consensus 251 ~~~i 254 (254)
T PF08282_consen 251 AKAI 254 (254)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.7e-08 Score=95.22 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=78.2
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
.+|+.|++.|+++.++|+.+...+..+.+.+|+.. +|... ..|-..++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~--kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGI--KKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecC--CCCHHHHHHHH
Confidence 48999999999999999999999999999999964 44333 24445555555
Q ss_pred HhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 747 ~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+++| +.++++||+.||.+|++.|++++||+ ++.+..|+.||.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~ 136 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAY 136 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCE
Confidence 4434 57999999999999999999999999 999999999986
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.4e-07 Score=95.85 Aligned_cols=128 Identities=26% Similarity=0.322 Sum_probs=91.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeec---chhhhc--c---------------
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE---GPEFRE--K--------------- 715 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~~---g~~~~~--~--------------- 715 (799)
+.|.+.++|+++++.|++++++||.....+..+++++|+... ++ .+.. ++.+.. +
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 778999999999999999999999999999999999998532 22 1111 111000 0
Q ss_pred ------------------------CHHHHhhhc----CCceE-----EEecCcc--cHHHHHHHHHHhCC---CEEEEEc
Q 003740 716 ------------------------SDEELSKLI----PKIQV-----MARSSPM--DKHTLVKHLRTTLG---EVVAVTG 757 (799)
Q Consensus 716 ------------------------~~~~~~~~~----~~~~v-----~ar~sP~--dK~~lV~~Lq~~~G---~vVa~~G 757 (799)
..+++.+.+ ....+ +....|. .|..-++.+.+.+| ..++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 001111111 11111 1233333 48888888877655 4689999
Q ss_pred CCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 758 DGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 758 DG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
|+.||.+|++.|++|+||| ++.+..|++||.
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~ 211 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADY 211 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcce
Confidence 9999999999999999999 999999999998
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.9e-07 Score=94.28 Aligned_cols=119 Identities=21% Similarity=0.222 Sum_probs=86.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..-....+...+-... -|. .+-...|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--------~p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--------QPD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE--------ecc--eeeEEccccHH
Confidence 57999999999999999999999999999999999999975311111111100000 011 11124567788
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..++.+.+++| +.+.|+||+.||.+|++.|+++++++ .+....+.|+|.
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~~ 201 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKDL 201 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhcccC
Confidence 88887766534 35899999999999999999999998 666667777763
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.3e-07 Score=97.06 Aligned_cols=52 Identities=27% Similarity=0.307 Sum_probs=46.1
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD 788 (799)
..|..-++.|.+.+| +.|+++|||.||.+||+.|+.|+||| +|.+.+|+.||
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~ 243 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLP 243 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCC
Confidence 357777887776656 56999999999999999999999999 99999999987
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.5e-07 Score=93.85 Aligned_cols=119 Identities=24% Similarity=0.283 Sum_probs=88.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeecchhhhccCHHHHhhhcCCceEEE--ecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~a--r~sP 735 (799)
++.||+.+.++.|+++ +++.++|+-....+..+.+++||..- +.....+.. .+.+ -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECcccccc
Confidence 4589999999999999 99999999999999999999998531 111111110 0111 1247
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC----ChHhHHHh
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF----NFSSRKTY 797 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi----nf~si~~~ 797 (799)
..|...++.++.. ++.+.|+|||.||.+|.++|++|+..+ .+.++..+.++. ++..+.+.
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccCCHHHHHHH
Confidence 8899999999888 889999999999999999999999887 444444444443 66665543
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.3e-07 Score=92.34 Aligned_cols=93 Identities=20% Similarity=0.276 Sum_probs=80.6
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
.+|+.|++.|+++.++||.....+..+++++|+.. +|. ...+|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 69999999999999999999999999999999864 343 3356877777776
Q ss_pred HhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 747 ~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+++| +.|+|+||+.||.+|++.|+++++++ ++.+..+..||+
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~ 150 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADY 150 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCE
Confidence 6645 47999999999999999999999998 888999988887
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.4e-07 Score=92.77 Aligned_cols=129 Identities=24% Similarity=0.327 Sum_probs=91.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeecchh----hh-ccC-------------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGPE----FR-EKS------------- 716 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~~g~~----~~-~~~------------- 716 (799)
.+.+.+.++|+.+++.|+.+.++||.+...+..+++++|+... ++ .+..... +. .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996422 21 1111100 00 000
Q ss_pred -----------------------HHHHhhhc---C-CceE-----EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCC
Q 003740 717 -----------------------DEELSKLI---P-KIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (799)
Q Consensus 717 -----------------------~~~~~~~~---~-~~~v-----~ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG 759 (799)
.+.+.+.. . ...+ +....| .+|..-++.+.+++| +.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 01111111 0 0111 112223 589999999887756 579999999
Q ss_pred ccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 760 TNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 760 ~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.||.+||+.|++|+||| ++.+..|+.||.
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~ 203 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADY 203 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCe
Confidence 99999999999999999 999999999996
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.52 E-value=7.7e-07 Score=102.75 Aligned_cols=52 Identities=33% Similarity=0.446 Sum_probs=43.9
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+|..-++.|.+.+| +-|+++|||.||.+||+.|+.|+||| +|.+..|++||.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~ 561 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADV 561 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCE
Confidence 45555555555545 46899999999999999999999999 999999999997
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.7e-07 Score=90.99 Aligned_cols=130 Identities=17% Similarity=0.122 Sum_probs=88.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeecchhhhccCHHHHhhhcCCceEE--Eec
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM--ARS 733 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~--ar~ 733 (799)
-+++||+++.++.|++.|+++.++||.....+..+.+.++.... +...+.|..+.. ..|.-..+ ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~--------~~p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI--------DWPHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------eCCCCCccccccC
Confidence 47899999999999999999999999999999999988754321 122333332211 01110010 011
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHH--hcCC---ChHhHHHhh
Q 003740 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELE--CCCF---NFSSRKTYI 798 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~--aaDi---nf~si~~~i 798 (799)
....|..+++.++.. .+.+.|+|||.||.+|++.||+.+|=+ .-.+-.++ -+.+ ||..|.+.+
T Consensus 141 cg~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 141 CGCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred CCCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 135799999999877 778899999999999999999988755 21111111 1122 888887654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.3e-06 Score=90.82 Aligned_cols=53 Identities=25% Similarity=0.308 Sum_probs=45.9
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+|..-++.+.+++| +-|+++||+.||.+|++.|++|+||| ++.+..|+.||.
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~ 253 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADL 253 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCE
Confidence 457777777766656 46899999999999999999999999 899999999997
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.7e-07 Score=85.46 Aligned_cols=108 Identities=21% Similarity=0.299 Sum_probs=76.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
+-||+++.++.|++.|.+|.++||--..-+..+|.++||...+- ..+.-...-++.. +....- -+...-|
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g------fd~~~p--tsdsggK 160 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG------FDTNEP--TSDSGGK 160 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc------cccCCc--cccCCcc
Confidence 46999999999999999999999999999999999999975321 0000000000000 000001 1223589
Q ss_pred HHHHHHHHHhCC-CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 739 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
...++.+++.+. ..++|+|||.||.+|+..||.=++.|
T Consensus 161 a~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 161 AEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 999999987633 68999999999999999988777555
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.9e-06 Score=89.30 Aligned_cols=129 Identities=30% Similarity=0.426 Sum_probs=91.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-ee----------------------------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IA---------------------------- 706 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~---------------------------- 706 (799)
++.+++.++|++|++.|+++.++||.+...+..+.+++|+... ++ .+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999997521 11 00
Q ss_pred -------------ecch--h-hh--------------c---------------cCH---HHHhhhcC------CceE---
Q 003740 707 -------------IEGP--E-FR--------------E---------------KSD---EELSKLIP------KIQV--- 729 (799)
Q Consensus 707 -------------~~g~--~-~~--------------~---------------~~~---~~~~~~~~------~~~v--- 729 (799)
+... . +. . .++ +++.+.+. .+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 0000 0 00 0 000 01111111 1211
Q ss_pred ---EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 730 ---MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 730 ---~ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+-...| ..|..-++.+.+.+| +.++++||+.||.+|++.|+.|+||| ++.+..|+.||.
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~ 242 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADY 242 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCE
Confidence 112233 468888998887755 57999999999999999999999999 999999999997
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.1e-06 Score=87.99 Aligned_cols=92 Identities=29% Similarity=0.320 Sum_probs=71.6
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcc-c--HH
Q 003740 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 739 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-d--K~ 739 (799)
|++.+.|+.++++|++++++||+....+..+|+.+||...+-..-+. +.+ ......++.+|. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~--~~~----------~~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL--FDN----------GGGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE--ECT----------TCCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee--eec----------ccceeeeeECCCCCCcHH
Confidence 88889999999999999999999999999999999997532111111 000 022356777766 5 99
Q ss_pred HHHHHH------HHhCCCEEEEEcCCccCHHhhh
Q 003740 740 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 767 (799)
Q Consensus 740 ~lV~~L------q~~~G~vVa~~GDG~NDapAL~ 767 (799)
..++.+ +.. ...+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 334 689999999999999986
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.5e-06 Score=85.22 Aligned_cols=123 Identities=24% Similarity=0.319 Sum_probs=85.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeecchhhhccCHHHHhhhcCCceEEEe---
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMAR--- 732 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~ar--- 732 (799)
+++|++++.++.|++.|+++.++||.....+..+++.+|+...+ ...+..+. .+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g----------------~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG----------------EYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC----------------cEECccCC
Confidence 36899999999999999999999999999999999999996311 00000000 01111
Q ss_pred ---cCcccHHHHHHHHHHhCC-CEEEEEcCCccCHHhhhc--CCeeeecCCCC-CHHHHHhcCC---ChHhHHHhh
Q 003740 733 ---SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHE--ADIGLAMGIAG-TEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 733 ---~sP~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~--AdVGiamgi~g-tevak~aaDi---nf~si~~~i 798 (799)
+.+..|...++.+++++| +.+.|+||+.||..|.++ ++++++.|... .+.....+|. ++..+.+.+
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 122458888888876645 568899999999999877 67777766221 2333445676 777776543
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.7e-06 Score=78.78 Aligned_cols=93 Identities=22% Similarity=0.329 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
-.|+.+.++||+|-++||.+...+..=|+++||.. +|-. -.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~qG--~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQG--ISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eeec--hHhHHHHHHHHH
Confidence 38999999999999999999999999999999963 3332 369999999888
Q ss_pred HhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 747 ~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++++ +-|+.+||-.||-|+|+....++|.. .+-+-.++.||.
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~ 137 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADY 137 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHh
Confidence 7755 67999999999999999999999998 888888888877
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.8e-06 Score=82.93 Aligned_cols=101 Identities=24% Similarity=0.275 Sum_probs=70.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
++|++.+.++.|++.|+++.++||.....+..+++.+|+..--...+...+ +.. ...++.--....+..|..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~-----~g~---~~g~~~~~~~~~~~~K~~ 145 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDD-----NGL---LTGPIEGQVNPEGECKGK 145 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECC-----CCE---EeCccCCcccCCcchHHH
Confidence 589999999999999999999999999999999999998631110010000 000 000000001245688999
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHhhhcC
Q 003740 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (799)
Q Consensus 741 lV~~Lq~~~G---~vVa~~GDG~NDapAL~~A 769 (799)
.++.++++.| +.+.++|||.||.||++.|
T Consensus 146 ~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 146 VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 9999876533 4689999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.8e-06 Score=81.84 Aligned_cols=114 Identities=19% Similarity=0.208 Sum_probs=79.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc--c
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP--~ 736 (799)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+...-..++..+...+ . ..+....++-++-+...| .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~-~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-N-DGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-C-CCcEEEecCCCCccCcCCCCC
Confidence 47899999999999999999999999999999999999998643223332222110 0 011111111101111122 3
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeee
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGia 774 (799)
.|..+++.+++++.+.+.++|||.||..|.++||+-+|
T Consensus 149 ~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 149 CKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 69999999887534678999999999999999998775
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.1e-06 Score=84.67 Aligned_cols=127 Identities=20% Similarity=0.172 Sum_probs=84.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeecchhhhccCHHHHhhhcCCceEE---Ee
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVM---AR 732 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~---ar 732 (799)
+++||+.+.++.|++.|+++.++||-+...+..+.+.+ +.... ...++|..+.. ..|.-... .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~--------~kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI--------TWPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE--------eccCCcccccccc
Confidence 67999999999999999999999999999999999998 64311 11122322110 00000000 00
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHh--cCC---ChHhHHHhh
Q 003740 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELEC--CCF---NFSSRKTYI 798 (799)
Q Consensus 733 ~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~a--aDi---nf~si~~~i 798 (799)
+ ...|...++.++.. ...+.|+|||.||.+|.++||+.++-+ .-.+.+++. +.+ ||..|.+.+
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCccccCCHHHHHHHH
Confidence 1 13588999988877 677899999999999999999977632 111221211 222 888887654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.2e-06 Score=83.35 Aligned_cols=107 Identities=16% Similarity=0.151 Sum_probs=78.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeecchhhhccCHHHHhhhcCCceEE-EecC
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVM-ARSS 734 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~-ar~s 734 (799)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..--+ .....+. . ...+ +. -.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g-------~---~~g~--~~~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG-------I---YTGN--IDGNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC-------E---EeCC--ccCCCCC
Confidence 45689999999999999999999999999999999999999953100 1110000 0 0000 00 1234
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
++.|...++.+.++.| +.+.++||+.||.|+++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6789988888765534 26789999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.8e-05 Score=83.37 Aligned_cols=125 Identities=18% Similarity=0.156 Sum_probs=83.2
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc----CCc-eeecch--h------hh--ccCHHHH-----
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNG-IAIEGP--E------FR--EKSDEEL----- 720 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~----~~~-~~~~g~--~------~~--~~~~~~~----- 720 (799)
.-+.+.++|+.|++.|++++++||.....+..+.+++|+.. .|+ .++... . +. .++.+.+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 34568999999999999999999999999999999999752 233 222211 1 00 0110000
Q ss_pred ------------------------------------------------------hhhcC--CceEE-----EecC--ccc
Q 003740 721 ------------------------------------------------------SKLIP--KIQVM-----ARSS--PMD 737 (799)
Q Consensus 721 ------------------------------------------------------~~~~~--~~~v~-----ar~s--P~d 737 (799)
.+.+. .+.+. -... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00000 01110 0111 257
Q ss_pred HHHHHHHHHHhCC-----CEEEEEcCCccCHHhhhcCCeeeecCCCCC---HHHHHh
Q 003740 738 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVELEC 786 (799)
Q Consensus 738 K~~lV~~Lq~~~G-----~vVa~~GDG~NDapAL~~AdVGiamgi~gt---evak~a 786 (799)
|..-++.+.+.+| +.|.++||+.||.+||+.|++|+||| ++. +..|+.
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~ 232 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPG 232 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCcc
Confidence 7777777776644 45999999999999999999999999 887 467775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.8e-05 Score=84.09 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=39.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
..+.+++.++|+.|++.|+++.++||.....+..+++++|+..
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4567889999999999999999999999999999999999853
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.7e-05 Score=80.21 Aligned_cols=40 Identities=10% Similarity=0.092 Sum_probs=37.2
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
+-+.++++|++|++.|+++++.||.....+..+++++|+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 4567999999999999999999999999999999999984
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.9e-05 Score=78.79 Aligned_cols=124 Identities=21% Similarity=0.297 Sum_probs=91.5
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
...+-|++++++..|+++|++..++|+++...+..+.+..|+...-..++.+.+.. ...-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~----------------~~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----------------PPKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC----------------CCCcCHHH
Confidence 45678999999999999999999999999999999999999976543333322211 01113344
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCC---eeeecCCC-CCHHHHHhcCC---ChHhHHHhh
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~Ad---VGiamgi~-gtevak~aaDi---nf~si~~~i 798 (799)
...+.+.+... .+.+.||||..+|..|=++|+ ||+..|.+ +.+.....+|. +++.+...+
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 44444444333 246999999999999999998 88999853 56777777888 777776654
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.7e-05 Score=79.04 Aligned_cols=121 Identities=22% Similarity=0.308 Sum_probs=83.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc-
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 737 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d- 737 (799)
-++.||+.+.++.|++.|+++.++||........+.+..|+...-..++.+++. .+..|..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~~~ 153 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSL------------------PNKKPDPA 153 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCC------------------CCCCcChH
Confidence 457899999999999999999999999999999999999986432233322221 1122221
Q ss_pred -HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe-eeec--CCC-CCHHHHHhcCC---ChHhHHHhh
Q 003740 738 -KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 738 -K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV-Giam--gi~-gtevak~aaDi---nf~si~~~i 798 (799)
-..+++.++.. .+.+.|+||+.||..+.+.|++ ++.+ |.. ..+.....+|. +|..+.+.+
T Consensus 154 ~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 154 PLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred HHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 12333333333 3568899999999999999988 4444 321 34555556776 788877654
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.4e-05 Score=72.85 Aligned_cols=117 Identities=20% Similarity=0.154 Sum_probs=75.1
Q ss_pred cccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 656 ~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
....++++++.+.++.|++.|++++++||.....+....+.+|+......++......................+++-.|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 45668899999999999999999999999999999999999998432222222111110000000000111112334444
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhc-CCeee
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE-ADIGL 773 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~-AdVGi 773 (799)
..+..+.+.+... .+.+.++||+.||.+|++. ..-++
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCcee
Confidence 4455555555433 4679999999999999998 44444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00011 Score=76.37 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=46.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD 788 (799)
..|...++.|.+++| ..|+++||+.||.+||+.|+.|++|| ++.+-.|+.||
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~ 212 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRH 212 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhc
Confidence 378888888887766 25789999999999999999999999 99999999999
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00012 Score=75.23 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=38.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455677999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00012 Score=83.41 Aligned_cols=103 Identities=19% Similarity=0.239 Sum_probs=80.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCC------------------ccccCCchHH
Confidence 578999999999999999999999999999999999999832 2333322 1146677787
Q ss_pred HHHHHHHHhCCCE-EEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhc
Q 003740 740 TLVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMGIAGTEVELECC 787 (799)
Q Consensus 740 ~lV~~Lq~~~G~v-Va~~GDG~NDapAL~~AdVGiamgi~gtevak~aa 787 (799)
..++... |+. ..++||..||.|+++.|+-.++++ .+...++.+.
T Consensus 131 ~~l~~~l---~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l~~~a~ 175 (479)
T PRK08238 131 AALVEAF---GERGFDYAGNSAADLPVWAAARRAIVVG-ASPGVARAAR 175 (479)
T ss_pred HHHHHHh---CccCeeEecCCHHHHHHHHhCCCeEEEC-CCHHHHHHHH
Confidence 6655332 332 578899999999999999999998 6666655554
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00018 Score=75.34 Aligned_cols=130 Identities=18% Similarity=0.217 Sum_probs=91.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC------Cc-eee-cchhhh----------------
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD------NG-IAI-EGPEFR---------------- 713 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~------~~-~~~-~g~~~~---------------- 713 (799)
..+..|...+.++++++.|+.++.+||......+.+.+++|+..+ ++ .++ .|....
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456779999999999999999999999999999999999997644 22 111 110000
Q ss_pred ---------cc-----------------CHH-------HHhhhcC----CceE-EE-----ecCc--ccHHHHHHHHHHh
Q 003740 714 ---------EK-----------------SDE-------ELSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 748 (799)
Q Consensus 714 ---------~~-----------------~~~-------~~~~~~~----~~~v-~a-----r~sP--~dK~~lV~~Lq~~ 748 (799)
.+ .++ ++.+.+. ++.+ .+ ...| ..|..-++.|++.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 000 1111111 1211 11 2233 5899999999887
Q ss_pred CC---CEEEEEcCCccCHHhhhc-CCeeeecCCCCCHHHHHhcC
Q 003740 749 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 749 ~G---~vVa~~GDG~NDapAL~~-AdVGiamgi~gtevak~aaD 788 (799)
+| ..|+++||+.||.+||+. ++.|++|+ ++.+..|+.++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~ 221 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYD 221 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHH
Confidence 65 579999999999999998 77999999 99998887654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.71 E-value=9.1e-05 Score=75.09 Aligned_cols=119 Identities=23% Similarity=0.259 Sum_probs=81.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++||.+...+..+-+..|+...-+.++..++. ....| |.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP--~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV------------------PRPKP--AP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC------------------CCCCC--Ch
Confidence 67899999999999999999999999999999999999996422222222110 11122 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee---cCC-CCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia---mgi-~gtevak~aaDi---nf~si~~~i 798 (799)
.+++...+++| +.++|+||+.+|..+-++|++... -|. +..+..++.+|+ ++..+...+
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 33333322224 569999999999999999998533 231 333456777887 777776654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00087 Score=68.77 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=36.0
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
-+.++++|+.|+++|+.+.++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0007 Score=69.52 Aligned_cols=118 Identities=15% Similarity=0.237 Sum_probs=80.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
-++.||+.+.++.|++.|+++.++|+........+.+..||...-+.++.+.+.. ...|.-
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp~~- 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP------------------YSKPHP- 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC------------------CCCCCH-
Confidence 3568999999999999999999999999999999999999875433333332210 112322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCC---CHHHHHhcCC---ChHhHHH
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG---TEVELECCCF---NFSSRKT 796 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~g---tevak~aaDi---nf~si~~ 796 (799)
.+.+.+.+++| +.+.|+||..||..|-+.|++....=..+ .+.-...+|+ +|..+..
T Consensus 152 -~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 152 -EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred -HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 23333333325 56899999999999999999754332122 2222334666 7777654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00099 Score=69.72 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.7
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
+..-+.+.++|++|++.||.|++.||-.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3455679999999999999999999999999999999999853
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00039 Score=73.47 Aligned_cols=121 Identities=13% Similarity=0.310 Sum_probs=79.3
Q ss_pred CCcccHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCc--cCCce-ee--cchh----------------------
Q 003740 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGI-AI--EGPE---------------------- 711 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~-aGI~v~mlTGD~~~tA~aiA~~~GI~--~~~~~-~~--~g~~---------------------- 711 (799)
.+-++++++|+.|++ .|+.+.++||........+.+.+++. ..++. +. .+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445889999999998 79999999999999999888877642 22221 00 0000
Q ss_pred -----------------hhccC--HH---HH----hhhcCCceEE-----EecCc--ccHHHHHHHHHHhCC---CEEEE
Q 003740 712 -----------------FREKS--DE---EL----SKLIPKIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAV 755 (799)
Q Consensus 712 -----------------~~~~~--~~---~~----~~~~~~~~v~-----ar~sP--~dK~~lV~~Lq~~~G---~vVa~ 755 (799)
++... ++ ++ .+..+...+. -...| .+|..-|+.+.+.+| ..|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00001 11 11 1111212211 12233 588888888877655 56889
Q ss_pred EcCCccCHHhhhcC----CeeeecCCCCCH
Q 003740 756 TGDGTNDAPALHEA----DIGLAMGIAGTE 781 (799)
Q Consensus 756 ~GDG~NDapAL~~A----dVGiamgi~gte 781 (799)
+||+.||-+|++.+ +.||+|| ++.+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~~ 224 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGAT 224 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCCC
Confidence 99999999999999 9999999 6543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00073 Score=68.76 Aligned_cols=117 Identities=19% Similarity=0.267 Sum_probs=78.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-+...+..+.+..|+...-..++.+.+. .+..|. ..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~-p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSL------------------AQRKPH-PD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCC------------------CCCCCC-hH
Confidence 57899999999999999999999999999999999999996432222222211 111221 12
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee-c--CCCC-CHHHHHhcCC---ChHhHHH
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA-M--GIAG-TEVELECCCF---NFSSRKT 796 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia-m--gi~g-tevak~aaDi---nf~si~~ 796 (799)
.+.+.+++. | +.++|+||..||..|.++|++-.. + |-.. .+.....+|. ++..+..
T Consensus 146 ~~~~~~~~~-~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERL-GVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HHHHHHHHc-CCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 233333332 4 568899999999999999998543 2 2111 2333445776 6666654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0014 Score=73.63 Aligned_cols=125 Identities=21% Similarity=0.213 Sum_probs=84.7
Q ss_pred CcccHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC------c-eeecchhhh-------------------
Q 003740 661 MRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDN------G-IAIEGPEFR------------------- 713 (799)
Q Consensus 661 ~R~~v~~aI-~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~------~-~~~~g~~~~------------------- 713 (799)
+.+....++ +++++.|+..+..||..+..+..+.++.++..+. + .+..+..+.
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 8899999999999999999999999999987652 1 011111000
Q ss_pred ----cc--------------------CH-------HHHhhhcC----CceE------EEecCc--ccHHHHHHHHHHhC-
Q 003740 714 ----EK--------------------SD-------EELSKLIP----KIQV------MARSSP--MDKHTLVKHLRTTL- 749 (799)
Q Consensus 714 ----~~--------------------~~-------~~~~~~~~----~~~v------~ar~sP--~dK~~lV~~Lq~~~- 749 (799)
.+ .+ +++.+.+. ++.+ +-...| ..|..-++.|.+++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 00 01 01111111 1221 113344 46999999998876
Q ss_pred --C---CEEEEEcCCccCHHhhhcCC-eeeecCCCCCHHHHHh
Q 003740 750 --G---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVELEC 786 (799)
Q Consensus 750 --G---~vVa~~GDG~NDapAL~~Ad-VGiamgi~gtevak~a 786 (799)
| ..|.++||+.||.+||+.|+ .||+|| ++.+..|+.
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~ 230 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQW 230 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHH
Confidence 4 47899999999999999999 699999 999998874
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00065 Score=72.08 Aligned_cols=116 Identities=17% Similarity=0.250 Sum_probs=78.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++.|++.++++.|++.|+++.++||-+...+..+..+.||....+.++.++ ..|..|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d----------------------~~~~~K 157 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGD----------------------TLPQKK 157 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecC----------------------CCCCCC
Confidence 4678999999999999999999999999999999999999854222222222 122222
Q ss_pred --HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe-eee--cCC-CCCHHHHHhcCC---ChHhHHH
Q 003740 739 --HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLA--MGI-AGTEVELECCCF---NFSSRKT 796 (799)
Q Consensus 739 --~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV-Gia--mgi-~gtevak~aaDi---nf~si~~ 796 (799)
..+++.+.+++| +.+.|+||+.||..+.+.|++ .+. -|- ...+..+..+|. ++..+.+
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 233333333324 578999999999999999997 333 331 122334456776 7766654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0012 Score=66.75 Aligned_cols=116 Identities=23% Similarity=0.389 Sum_probs=78.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC--CccCCceee-c-chhh-h--------------c------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG--ILTDNGIAI-E-GPEF-R--------------E------ 714 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~G--I~~~~~~~~-~-g~~~-~--------------~------ 714 (799)
++.+.+.+++++|++.|+++.++||.....+..+.++++ +...++..+ . +... . .
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477899999999999999999999999999999998754 233333111 0 1000 0 0
Q ss_pred -c-------------------------CHH---HHhhh-------cCCceEEE------ecCc--ccHHHHHHHHHHhCC
Q 003740 715 -K-------------------------SDE---ELSKL-------IPKIQVMA------RSSP--MDKHTLVKHLRTTLG 750 (799)
Q Consensus 715 -~-------------------------~~~---~~~~~-------~~~~~v~a------r~sP--~dK~~lV~~Lq~~~G 750 (799)
+ .+. ++.+. .+.+.+.. ...| .+|...++.+.+++|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 000 00000 01222321 2234 799999999987755
Q ss_pred ---CEEEEEcCCccCHHhhhcCCeeeec
Q 003740 751 ---EVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 751 ---~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
..++++||+.||.+|++.+++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00063 Score=69.42 Aligned_cols=118 Identities=21% Similarity=0.186 Sum_probs=78.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+.||+.+.++.|++.|+++.++||.....+..+-+..|+...-..++.+++. .+..| |-.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~------------------~~~Kp--~p~ 142 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDV------------------EHAKP--DPE 142 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcC------------------CCCCC--CcH
Confidence 6799999999999999999999999999999999999996532333322221 11122 122
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe---eeecCCCCC-HHHHHhcCC---ChHhHHHhh
Q 003740 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGT-EVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 741 lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV---Giamgi~gt-evak~aaDi---nf~si~~~i 798 (799)
.++.+.+++| ..+.|+||..+|..|-++|++ |+.-|.... +.....+|. ++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 2333322223 568999999999999999998 343341111 233445666 777776643
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0015 Score=68.45 Aligned_cols=93 Identities=14% Similarity=0.161 Sum_probs=65.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCcee------ecchhhhccCHHHHhhhcCCceEEE
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA------IEGPEFREKSDEELSKLIPKIQVMA 731 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~v~a 731 (799)
.-++|||+.+.++.|++.|+++.++||-....+..+.++.|+...+..+ ++.+. +..
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG-----------------vlt 181 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG-----------------VLK 181 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC-----------------eEe
Confidence 3567999999999999999999999999999999999999996443222 21110 111
Q ss_pred e-----cCcccHHHHHHH-HHHhCC-----CEEEEEcCCccCHHhhh
Q 003740 732 R-----SSPMDKHTLVKH-LRTTLG-----EVVAVTGDGTNDAPALH 767 (799)
Q Consensus 732 r-----~sP~dK~~lV~~-Lq~~~G-----~vVa~~GDG~NDapAL~ 767 (799)
. +....|...+.. ..+.+| ..|.|+|||.||.+|..
T Consensus 182 G~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 182 GFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred CCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 1 111467665542 332223 57889999999999944
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0023 Score=74.41 Aligned_cols=39 Identities=8% Similarity=0.195 Sum_probs=35.9
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
-+.+.++|+.|+++|+.++++||.....+..+++++|+.
T Consensus 435 ~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 435 YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 356899999999999999999999999999999999974
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0012 Score=66.54 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=66.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+...-..++.+++ +..+-.|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 455677889999999999999999999999999999999999653333333332 111223333
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcC
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~A 769 (799)
-....+.+.-. .+.+.|+||+.+|..|-++|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 23444444333 45789999999999887765
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0031 Score=64.07 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=75.6
Q ss_pred CCcccHHHHHH-HHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~-~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++|++.+.|+ .+++.|++++++|+=....+..+|+..|+..... ++ |.+++.... .++ .-..|.-++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~~-~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GWV-LPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ceE-cCccCCChHH
Confidence 46899999996 7888999999999999999999999966643222 22 222221000 000 1124667899
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
..-++..-....+..-+=||..||.|+|+.||-.++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 98887653221244568899999999999999999885
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0054 Score=62.47 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=75.2
Q ss_pred CCcccHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI-~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+..... ++ |.+++. ..-.++ .-..|..+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~-~i-~t~l~~-------~~tg~~-~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVN-LI-ASQMQR-------RYGGWV-LTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCc-eE-EEEEEE-------EEccEE-CCccCCChHH
Confidence 4489999999 57888999999999999999999999999632111 22 222211 000000 1123667899
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
...++..-.......-+=||..||.|+|+.|+-.++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 98887653211344557899999999999999999886
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0033 Score=64.94 Aligned_cols=119 Identities=16% Similarity=0.080 Sum_probs=78.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcc--c
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~--d 737 (799)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...-..++.+.+. .+.-|. -
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL------------------AERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC------------------CCCCCCHHH
Confidence 56899999999999999999999999999988888999986532233322211 111221 1
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeee---cCCC-CC-HHHHHhcCC---ChHhHHHh
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GT-EVELECCCF---NFSSRKTY 797 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGia---mgi~-gt-evak~aaDi---nf~si~~~ 797 (799)
=..+++.+.-. .+.+.|+||+.||..|-+.|++-.. -|-. .. +.....+|. ++..+.+.
T Consensus 157 ~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 157 LLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred HHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 12233333222 3669999999999999999987532 2311 11 223345777 77777653
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0062 Score=63.65 Aligned_cols=51 Identities=22% Similarity=0.231 Sum_probs=43.1
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHhhhcC-CeeeecCCCCCHHHHHhcC
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GD----G~NDapAL~~A-dVGiamgi~gtevak~aaD 788 (799)
-+|..-|+.|.+. -+-|+++|| |-||.+||+.| -.|++.+ ++.|..|..+.
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~ 242 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKE 242 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHH
Confidence 5788888888777 678999999 99999999976 6788888 99998887764
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0032 Score=64.92 Aligned_cols=86 Identities=20% Similarity=0.261 Sum_probs=62.6
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 662 RPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD----~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
.+++++.++.+++.|+++.++|+- ...++..+.+.+||......++.+++.. .-.| +
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp-~ 176 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY-T 176 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-C
Confidence 445999999999999999999997 7779999999999965333333333211 0112 3
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV 771 (799)
|. ..+++. | ++.|+||..||..+-++|.+
T Consensus 177 ~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 177 KT---QWIQDK-N-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred HH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCC
Confidence 43 344444 5 57899999999999999876
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0043 Score=65.75 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=77.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+||...-..++.+++ .+ .|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~----------------------~~-~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP----------------------IL-SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC----------------------CC-CCH
Confidence 4679999999999999999999999999999999999999653222222221 11 133
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee---cCCCCCH--HHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA---MGIAGTE--VELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia---mgi~gte--vak~aaDi---nf~si~~~ 797 (799)
...+.+.+++| +.++|+||+.+|..|-++|++-.. -| ..+. .....+|. ++..+...
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g-~~~~~~l~~~~ad~~i~~~~eL~~~ 266 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWG-FNDRQSLVAACPDWLLETPSDLLQA 266 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecC-CCCHHHHHHCCCCEEECCHHHHHHH
Confidence 33333322213 568999999999999999988532 23 2222 23345677 66666553
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0064 Score=62.19 Aligned_cols=120 Identities=24% Similarity=0.355 Sum_probs=81.7
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceeecchhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. ..-..++.+.+.. +.-|.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~------------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA------------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC------------------CCCCC
Confidence 478999999999999999999999999999999999999986 4333444333311 12231
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCeeeecC-CCCCH----HHHHhcCC---ChHhHHHhh
Q 003740 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMG-IAGTE----VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 737 dK~~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdVGiamg-i~gte----vak~aaDi---nf~si~~~i 798 (799)
-..+-+.+++. | +.+.|+||+.+|..|-+.|++..+++ ..|.. .....+|. +++.+...+
T Consensus 148 -p~~~~~a~~~~-~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 148 -PDLILRAMELT-GVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred -HHHHHHHHHHc-CCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 12233344433 4 46999999999999999999986322 13322 22234553 777766543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.011 Score=61.86 Aligned_cols=92 Identities=21% Similarity=0.267 Sum_probs=69.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+.... +.++.+++. .+.-| +.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~------------------~~~KP-~p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV------------------PAGRP-AP 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC------------------CCCCC-CH
Confidence 45789999999999999999999999999999999999986532 333333321 11233 33
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCe
Q 003740 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 739 ~~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdV 771 (799)
.-+.+.+++. | +.+.|+||..+|..|-+.|++
T Consensus 160 ~~~~~a~~~l-~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 160 WMALKNAIEL-GVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred HHHHHHHHHc-CCCCchheEEECCcHHHHHHHHHCCC
Confidence 4455556555 5 348999999999999999996
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.012 Score=62.33 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=69.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... +.++.+++. ...-| +.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~------------------~~~KP-~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV------------------PAGRP-YP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC------------------CCCCC-Ch
Confidence 45789999999999999999999999999988888888775421 223222221 11123 23
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCe---eeecC
Q 003740 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdV---Giamg 776 (799)
.-+.+.+++. | +.+.|+||..+|..|-+.|++ |+.-|
T Consensus 162 ~~~~~a~~~l-~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 162 WMALKNAIEL-GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHHHHHHHHc-CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 4455555554 4 358999999999999999996 55544
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0056 Score=64.43 Aligned_cols=93 Identities=16% Similarity=0.243 Sum_probs=69.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+||...-..++.+.+.. +..|. -.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~------------------~~KP~-Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY------------------RGKPD-PE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC------------------CCCCC-HH
Confidence 468999999999999999999999999999999999999976444555554421 11221 12
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+...+++. | +.++|+||..+|..|-+.|++-
T Consensus 170 ~~~~a~~~l-~~~p~~~l~IgDs~~Di~aA~~aG~~ 204 (260)
T PLN03243 170 MFMYAAERL-GFIPERCIVFGNSNSSVEAAHDGCMK 204 (260)
T ss_pred HHHHHHHHh-CCChHHeEEEcCCHHHHHHHHHcCCE
Confidence 223333333 4 5689999999999999999983
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.015 Score=54.17 Aligned_cols=89 Identities=20% Similarity=0.223 Sum_probs=63.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCC--------HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEE
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~--------~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 730 (799)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .. ++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~-----------------------~~ 79 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VL-----------------------YA 79 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EE-----------------------EE
Confidence 3678999999999999999999999998 7788889999998521 00 11
Q ss_pred EecCcccHHHHHHHHHHhCC----CEEEEEcC-CccCHHhhhcCCe
Q 003740 731 ARSSPMDKHTLVKHLRTTLG----EVVAVTGD-GTNDAPALHEADI 771 (799)
Q Consensus 731 ar~sP~dK~~lV~~Lq~~~G----~vVa~~GD-G~NDapAL~~AdV 771 (799)
+...+.-|-.+++.+.++++ +.+.|+|| -.+|..+-+.|++
T Consensus 80 ~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 80 CPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 10011223344444444432 67999999 5899999998876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0066 Score=62.57 Aligned_cols=85 Identities=21% Similarity=0.306 Sum_probs=63.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCc--cCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD----~~~tA~aiA~~~GI~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
.+.|++++.++.+++.|+++.++||. ...|+..+.+..||. ..... +++..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v-----------------------il~gd 170 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV-----------------------IFAGD 170 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE-----------------------EEcCC
Confidence 36788999999999999999999995 467999999999994 22122 23322
Q ss_pred Cc--ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee
Q 003740 734 SP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 734 sP--~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
++ .+|.. .+++. | ++.|+||..+|..|-++|++-
T Consensus 171 ~~~K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 171 KPGQYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 22 45554 44444 5 488999999999999999873
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0085 Score=60.21 Aligned_cols=93 Identities=12% Similarity=0.196 Sum_probs=66.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++.|+++.++|+-+......+.+.+||...-+.++..++. ....|. ..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~-~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAV------------------RAYKPA-PQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhc------------------CCCCCC-HH
Confidence 46899999999999999999999999999999999999985433333333321 122332 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+-..+++. | +.+.|+||+.+|..+-++|++-
T Consensus 153 ~~~~~~~~~-~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 153 VYQLALEAL-GVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHh-CCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 233333333 4 5688999999999998888874
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.024 Score=68.77 Aligned_cols=152 Identities=19% Similarity=0.269 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecc--cCCCcccHHHHHHHHHh-CCCEEEEEcCCCHH
Q 003740 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI--KDPMRPGVKESVAICRS-AGITVRMVTGDNIN 688 (799)
Q Consensus 612 ~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~--~D~~R~~v~~aI~~l~~-aGI~v~mlTGD~~~ 688 (799)
++.....|.....|.+++- -|.|++....- ...+-+++.++++.|.+ .|+.|+++||....
T Consensus 480 ~~~~~~~y~~~~~rLi~~D----------------~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~ 543 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLD----------------YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRD 543 (726)
T ss_pred HHHHHHHHHhccceEEEEe----------------cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence 4455666666666777663 34455443211 12367899999999999 69999999999999
Q ss_pred HHHHHHHHcCC--ccCCceeec--chhhhcc-----------------------------------------CH------
Q 003740 689 TAKAIARECGI--LTDNGIAIE--GPEFREK-----------------------------------------SD------ 717 (799)
Q Consensus 689 tA~aiA~~~GI--~~~~~~~~~--g~~~~~~-----------------------------------------~~------ 717 (799)
.........++ ..+++..+. |.++... ++
T Consensus 544 ~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~ 623 (726)
T PRK14501 544 TLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEAR 623 (726)
T ss_pred HHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHH
Confidence 88887665553 223331111 1111000 00
Q ss_pred -HHHh----hhcC--CceEEE-----ecCc--ccHHHHHHHHHHhC-CCEEEEEcCCccCHHhhhcC---CeeeecCCCC
Q 003740 718 -EELS----KLIP--KIQVMA-----RSSP--MDKHTLVKHLRTTL-GEVVAVTGDGTNDAPALHEA---DIGLAMGIAG 779 (799)
Q Consensus 718 -~~~~----~~~~--~~~v~a-----r~sP--~dK~~lV~~Lq~~~-G~vVa~~GDG~NDapAL~~A---dVGiamgi~g 779 (799)
+++. ..+. .+.+.. ...| -+|...++.+.+.. -..|+++||+.||.+|++.+ ..+++|| ++
T Consensus 624 a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~ 702 (726)
T PRK14501 624 ANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG 702 (726)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC
Confidence 0111 1111 122211 1223 68999999888652 25899999999999999996 5899999 64
Q ss_pred C
Q 003740 780 T 780 (799)
Q Consensus 780 t 780 (799)
.
T Consensus 703 ~ 703 (726)
T PRK14501 703 E 703 (726)
T ss_pred C
Confidence 3
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.016 Score=57.07 Aligned_cols=105 Identities=18% Similarity=0.079 Sum_probs=62.8
Q ss_pred CcceeeeeecccC----CCcccHHHHHHHHHhCCCEEEEEcCCCHH--------HHHHHHHHcCCccCCceeec----ch
Q 003740 647 EGYTCIGIVGIKD----PMRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAIE----GP 710 (799)
Q Consensus 647 ~~~~~lg~~~~~D----~~R~~v~~aI~~l~~aGI~v~mlTGD~~~--------tA~aiA~~~GI~~~~~~~~~----g~ 710 (799)
.|.++.|...+.+ ++-||+++.++.|++.|+++.++|+.... .....-+..|+..- ... ++
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~ 87 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI---YLCPHKHGD 87 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE---EECcCCCCC
Confidence 4555555544333 26799999999999999999999987631 22333445565320 000 00
Q ss_pred hhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee
Q 003740 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (799)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia 774 (799)
+ ....-|.- ..+-+.+++. | +-+.|+||..+|..|-++|++-..
T Consensus 88 ~------------------~~~~KP~p-~~~~~~~~~l-~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 88 G------------------CECRKPST-GMLLQAAEKH-GLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred C------------------CCCCCCCH-HHHHHHHHHc-CCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 0 00112211 2222333332 4 569999999999999999998543
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.008 Score=62.86 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=68.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||...-+.++.+++... ..-.|+-=.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------------CCCChHHHH
Confidence 4688999999999999999999999999999999999999754444544444210 111121112
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
...+.+.-. .+.+.|+||..+|..|-++|++-
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCE
Confidence 222323222 35689999999999999999974
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0092 Score=57.14 Aligned_cols=100 Identities=23% Similarity=0.251 Sum_probs=72.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC----CccC----Cc--eeecchhhhccCHHHHhhhcCCceE
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTD----NG--IAIEGPEFREKSDEELSKLIPKIQV 729 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~G----I~~~----~~--~~~~g~~~~~~~~~~~~~~~~~~~v 729 (799)
.++|+-++.++.|++.+++++++|+--.--...+=...+ |..- +. ...+|+-. .+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~---------------i~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHS---------------IK 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCcee---------------ee
Confidence 468999999999999999999999887777777766665 3210 00 11111111 11
Q ss_pred EEecCc--ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeec
Q 003740 730 MARSSP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 730 ~ar~sP--~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
.-..+| .||...|+.|++. .+.+-|+|||+.|..|-+.+|+=+|=
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cCCccccCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhhH
Confidence 111222 6899999999998 89999999999999999999987753
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.016 Score=59.18 Aligned_cols=96 Identities=17% Similarity=0.210 Sum_probs=67.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+.....+...-+..|+.. ...++.+++. .+.-|. -.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~------------------~~~KP~-p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERV------------------KRGKPE-PD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHh------------------cCCCCC-cH
Confidence 468999999999999999999999998877777777788732 2233333321 122332 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee-eecC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMG 776 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG-iamg 776 (799)
-+...+++. | +.+.|+||..+|..|-+.|++- +.+.
T Consensus 143 ~~~~~~~~~-g~~p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 143 AYLLGAQLL-GLAPQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred HHHHHHHHc-CCCcccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 333344433 4 6789999999999999999983 4444
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.019 Score=65.79 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=79.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+...-..++.+++. .....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v-----------------~~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQI-----------------NSLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCC-----------------CCCCCcH---
Confidence 67899999999999999999999999999999999999997543344444331 1112232
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe-eeecCC-CCCHHHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGI-AGTEVELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV-Giamgi-~gtevak~aaDi---nf~si~~~ 797 (799)
-+...+++.--+.+.|+||..+|..|-+.|++ .|...- .+.+-....+|. +++.+...
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHH
Confidence 22333332212568999999999999999997 333320 222212234566 66666554
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0066 Score=60.10 Aligned_cols=91 Identities=14% Similarity=0.262 Sum_probs=63.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|+++|+++.++|+.. .+..+.+.+|+...-+.++.+.+. .+.-| +..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp-~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEI------------------KKGKP-DPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhc------------------CCCCC-ChH
Confidence 567999999999999999999999743 245678888986543344433331 12233 233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+-+.+++. | +.+.|+||..+|..+-+.|++-
T Consensus 146 ~~~~~~~~~-~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGL-GVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHc-CCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 333444433 4 4588999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.014 Score=59.84 Aligned_cols=113 Identities=23% Similarity=0.352 Sum_probs=75.0
Q ss_pred CCcccHHHHHHHH--HhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCc-eEEEecCc-
Q 003740 660 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI-QVMARSSP- 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l--~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~v~ar~sP- 735 (799)
|+-|+.+++++.| ++.|+.++++|-=|..--..|=+.-|+...-..+++-+-.- .+.....+.|.. .-+.++.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~--~~~G~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACF--DADGRLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCcee--cCCceEEEeCccCCCCCcCCCc
Confidence 6688999999999 56899999999999999999999999864322222221100 000011111111 11335555
Q ss_pred ccHHHHHHHHHHh---CC---CEEEEEcCCccC-HHhh--hcCCeeee
Q 003740 736 MDKHTLVKHLRTT---LG---EVVAVTGDGTND-APAL--HEADIGLA 774 (799)
Q Consensus 736 ~dK~~lV~~Lq~~---~G---~vVa~~GDG~ND-apAL--~~AdVGia 774 (799)
.=|..+++.+++. .| ..|.++|||.|| +|++ +.+|+-++
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFP 196 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEec
Confidence 4899999998865 24 689999999999 4554 46776553
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.018 Score=59.21 Aligned_cols=93 Identities=12% Similarity=0.098 Sum_probs=66.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+...-+.++.+.++ .+..|. -
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP~--p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKED--Q 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCCC--H
Confidence 56899999999999999999999999988888888889986432333322221 112231 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
.+.+...+++| +.+.|+||..+|..+-+.|++.
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 33333322224 5689999999999999999985
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.034 Score=53.70 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=68.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHHc---C--CccCCceee-cchhhhccCHHHHhhhcCCce
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---G--ILTDNGIAI-EGPEFREKSDEELSKLIPKIQ 728 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~---aiA~~~---G--I~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 728 (799)
+|.+.|+++++++.+++.|+++.++||.....+. ....++ | +.. ..++. .|..+..+. + .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~---------~-e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALH---------R-E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhh---------c-c
Confidence 5788999999999999999999999999988874 455552 3 321 11221 122111000 0 0
Q ss_pred EEEecCccc-HHHHHHHHHHhC----CCEEEEEcCCccCHHhhhcCCe
Q 003740 729 VMARSSPMD-KHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 729 v~ar~sP~d-K~~lV~~Lq~~~----G~vVa~~GDG~NDapAL~~AdV 771 (799)
+. ...|+. |...++.+++.+ ...++..||+.+|+.|-++++|
T Consensus 94 ~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 94 VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 22 223444 888888888731 4788899999999999887765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.012 Score=61.45 Aligned_cols=46 Identities=30% Similarity=0.416 Sum_probs=38.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHH
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtev 782 (799)
..|..-|+.|++++| +.|.++||..||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 679999999988865 35777999999999999999999999 87776
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.017 Score=56.14 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=67.2
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++.|++.+.++.|++.|+++.++|+-.........+.+|+...-+.++...+.. ...|. .
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------------------~~Kp~-~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVG------------------SRKPD-P 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSS------------------SSTTS-H
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhh------------------hhhhH-H
Confidence 3568999999999999999999999999999999999999974333333333211 01121 1
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee
Q 003740 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 739 ~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
..+-+.+++. ..+.+.|+||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 1222223222 146799999999999999988864
|
... |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.018 Score=56.74 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=61.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+...-+.++.+.+. ....|. ..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~------------------~~~KP~-~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDV------------------GRGKPD-PD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCC------------------CCCCCC-HH
Confidence 678999999999999999999999988877 6666668986432333322221 111221 12
Q ss_pred HHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCe
Q 003740 740 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdV 771 (799)
.+-+.+++. ....+.|+||...|..+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 222223222 13678899999999999888876
|
HAD subfamilies caused by an overly broad single model. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.039 Score=52.46 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=75.6
Q ss_pred HHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003740 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (799)
Q Consensus 616 ~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~ 695 (799)
.+.+.++|++++.+- -|-|+++.= ....-|++++-+++++.+|+++.++|.-++..+..++.
T Consensus 20 ~~~L~~~Gikgvi~D----------------lDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 20 PDILKAHGIKGVILD----------------LDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHHHHHcCCcEEEEe----------------ccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 356678899988762 223333321 23456899999999999999999999999999999999
Q ss_pred HcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCc-cCHHhhh
Q 003740 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT-NDAPALH 767 (799)
Q Consensus 696 ~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~ 767 (799)
.+|+.- ++--.-|.- ..+-+++++. + +.|+|+||-. -|.-+=+
T Consensus 82 ~l~v~f---------------------------i~~A~KP~~-~~fr~Al~~m-~l~~~~vvmVGDqL~TDVlggn 128 (175)
T COG2179 82 KLGVPF---------------------------IYRAKKPFG-RAFRRALKEM-NLPPEEVVMVGDQLFTDVLGGN 128 (175)
T ss_pred hcCCce---------------------------eecccCccH-HHHHHHHHHc-CCChhHEEEEcchhhhhhhccc
Confidence 999963 333334443 4667788776 5 6899999974 3554433
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.015 Score=57.54 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=62.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
-++.||+.+.++.|++.|+++.++|+- ..+..+-+.+|+...-+.++.+.+. .+..|...
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~------------------~~~kp~~~ 146 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEV------------------KEGKPHPE 146 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhC------------------CCCCCChH
Confidence 367899999999999999999999987 6677888889986432233322211 12233221
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+-+.+++. | +.+.|+||..+|..+-+.|++-
T Consensus 147 -~~~~~~~~~-~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 -TFLLAAELL-GVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred -HHHHHHHHc-CCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 122233322 3 5688999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.016 Score=62.49 Aligned_cols=108 Identities=14% Similarity=0.054 Sum_probs=73.7
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc-CCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
..+++.|++.++++.|++.|+++.++||....++..+.+.+|+.. .-.. +.|.+. ...+..... -.+-.|
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~-i~~~~~----~~~~~~~~~----~~kp~p 254 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD-LIGRPP----DMHFQREQG----DKRPDD 254 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh-hhCCcc----hhhhcccCC----CCCCcH
Confidence 678999999999999999999999999999999999999999863 1111 111110 000000000 013345
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeee
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.=+...++.+-...-..+.|+||..+|+.+-+.|++-.
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 55565655543210267999999999999999999864
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.018 Score=58.92 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=68.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++.|+++.++|+-+...+...-+.+|+...-+.++.+.+. .+.-|.. .
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~~-~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------------------GVEKPHP-K 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC------------------CCCCCCH-H
Confidence 46899999999999999999999999988888888999986433333333221 1223322 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCe-eeecC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADI-GLAMG 776 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdV-Giamg 776 (799)
-+...+++. | +.+.|+||.. +|..+-++|++ .|.+.
T Consensus 155 ~~~~~~~~~-~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRL-GVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHc-CCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 333444443 4 5689999998 99999999987 34333
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.075 Score=52.10 Aligned_cols=114 Identities=11% Similarity=0.069 Sum_probs=74.1
Q ss_pred ceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCc
Q 003740 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (799)
Q Consensus 649 ~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD-~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (799)
.......+-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+||..... . ..+...+..+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~------~------~~~~~~Fd~i 101 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK------T------VPMHSLFDDR 101 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC------c------ccHHHhceee
Confidence 3455666667788999999999999999999999965 8999999999999851100 0 0000111111
Q ss_pred eEEEecCcccH--HHHHHHHHHhC-----CCEEEEEcCCccCHHhhhcCCeeeec
Q 003740 728 QVMARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 728 ~v~ar~sP~dK--~~lV~~Lq~~~-----G~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
+.+.-.+..| ..+.+.+.+.+ -+.+.|+||...|+.|-++|.+-...
T Consensus 102 -v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 -IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred -eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 2222211122 23344443321 25799999999999999999885544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.059 Score=53.39 Aligned_cols=126 Identities=19% Similarity=0.253 Sum_probs=81.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------------eeecchhh
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------------IAIEGPEF 712 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~---------------------------~~~~g~~~ 712 (799)
.+-||+.++.+.+++. ...+++|---.+-+.++|.-+|+...+- ..++|+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3468999999999876 6777888888899999999999964321 11222221
Q ss_pred h--------ccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC--CCEEEEEcCCccCHHhhhcCCe--eeecCCCCC
Q 003740 713 R--------EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL--GEVVAVTGDGTNDAPALHEADI--GLAMGIAGT 780 (799)
Q Consensus 713 ~--------~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~--G~vVa~~GDG~NDapAL~~AdV--Giamgi~gt 780 (799)
- .+.+.++.+++..+.+.+. ..|.++++.+-..- ....+++||.+.|..||+++.= |+|+.-+|-
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1 1112223333333333332 35555555554431 2346899999999999999852 366666898
Q ss_pred HHHHHhcCC
Q 003740 781 EVELECCCF 789 (799)
Q Consensus 781 evak~aaDi 789 (799)
+=|..-||+
T Consensus 239 eYal~eAdV 247 (315)
T COG4030 239 EYALKEADV 247 (315)
T ss_pred cccccccce
Confidence 888888887
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.057 Score=52.91 Aligned_cols=83 Identities=22% Similarity=0.289 Sum_probs=61.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.. .+...-|.-
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p- 94 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPG- 94 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCCh-
Confidence 567999999999999999999999988 677888888888742 111223322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCe
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADI 771 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdV 771 (799)
..+-..+++. | +.++|+||.. .|..+-+.|++
T Consensus 95 ~~~~~~l~~~-~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 95 CAFRRAHPEM-GLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred HHHHHHHHHc-CCCHHHEEEECCcchHHHHHHHHcCC
Confidence 2233333333 4 5699999998 79999999987
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.072 Score=52.71 Aligned_cols=97 Identities=19% Similarity=0.092 Sum_probs=55.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
.+.||+.++++.|++.|+++.++|..+. .....+-+..|+.-. .++......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~----------- 95 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHP----------- 95 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCC-----------
Confidence 3579999999999999999999998763 111223344555211 111000000
Q ss_pred CCceEEEecCcccHHHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee
Q 003740 725 PKIQVMARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
.. .....-| +..-+.+.+++. ..+.+.|+||..+|..+-+.|++.
T Consensus 96 ~~--~~~~~KP-~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 96 ED--GCDCRKP-KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred CC--CCcCCCC-CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 00 0011122 122333333332 036799999999999999999973
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.039 Score=56.35 Aligned_cols=116 Identities=13% Similarity=0.092 Sum_probs=74.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++. +++.++|+-....+..+-++.|+...-+.++.+.+. ....|..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~------------------~~~KP~~-- 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA------------------GIQKPDK-- 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc------------------CCCCCCH--
Confidence 5689999999999999 999999999999999999999996533333322221 1112322
Q ss_pred HHHHHHHHhC----CCEEEEEcCCc-cCHHhhhcCCe---eeecCCCCCHHHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTL----GEVVAVTGDGT-NDAPALHEADI---GLAMGIAGTEVELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~----G~vVa~~GDG~-NDapAL~~AdV---Giamgi~gtevak~aaDi---nf~si~~~ 797 (799)
.+.+..-+++ -+.+.|+||.. +|..+-+.+++ ++.-| ..++.....+|. +++.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~-~~~~~~~~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPD-MHPNPDDIIPTYEIRSLEELYEI 223 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCC-CCCCCCCCCCceEECCHHHHHhh
Confidence 2222222222 24689999998 89999999995 44333 222212223443 66666544
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.076 Score=54.39 Aligned_cols=118 Identities=17% Similarity=0.190 Sum_probs=74.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|+ .|+++.++|+.....+...-+..|+...-+.++.+.+. ...-| +..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP-~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV------------------GVAKP-DVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc------------------CCCCC-CHH
Confidence 36899999999999 68999999999988888888889986432222222221 01123 223
Q ss_pred HHHHHHHHhCC----CEEEEEcCCc-cCHHhhhcCCee-eecCCCCCH-HHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIG-LAMGIAGTE-VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G----~vVa~~GDG~-NDapAL~~AdVG-iamgi~gte-vak~aaDi---nf~si~~~i 798 (799)
-+-..+++. | +.+.|+||.. +|..+-+.|++- +...-.+.+ .....+|. +|..+.+.+
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQM-GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHHc-CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 333444433 4 4699999998 799999999974 333211211 11123555 677666543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.055 Score=51.57 Aligned_cols=96 Identities=26% Similarity=0.342 Sum_probs=60.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
++.||+.++++.|++.|+++.++|..+. .....+.+.+|+... ........-.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~----------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPA----------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCC-----------
Confidence 4689999999999999999999998763 455667788888521 0000000000
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
.......| |..+.+...+++| +.+.|+||...|..+-+.|++-
T Consensus 95 ---~~~~~~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 ---DNCSCRKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ---CCCCCCCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00000123 3344444433335 5699999999999998888874
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.037 Score=60.94 Aligned_cols=94 Identities=18% Similarity=0.231 Sum_probs=69.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-+...+..+-+..||...-+.++.+++.. +.-|.. .
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~------------------~~KP~P-e 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY------------------RGKPDP-E 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC------------------CCCCCH-H
Confidence 367999999999999999999999999999999999999975444444444321 122321 1
Q ss_pred HHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+..++++. ....+.|+||..+|+.|-+.|++-
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 222233322 146799999999999999999984
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.062 Score=55.03 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=58.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~a-iA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.+.++.|++.|+++.++||-....... ..+..|+......++.+.+.. + .+.-|. -
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~---------------~-~~~KP~-p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPE---------------V-KQGKPA-P 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhh---------------c-cCCCCC-c
Confidence 468999999999999999999999987654432 222234432212222222000 0 011121 1
Q ss_pred HHHHHHHHHhCC------CEEEEEcCCccCHHhhhcCCeee
Q 003740 739 HTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 739 ~~lV~~Lq~~~G------~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.-+...+++. | +-+.|+||...|+.|-+.|++-.
T Consensus 141 ~~~~~a~~~~-~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 141 DIFLAAARRF-EDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHHh-CCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 2233333333 3 66999999999999999999843
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.038 Score=52.77 Aligned_cols=93 Identities=17% Similarity=-0.007 Sum_probs=66.8
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
-++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ..++.+++.. +.-|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP~- 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKGK- 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCCe-
Confidence 356999999999999 57999999999999999999999985321 2333333211 11232
Q ss_pred HHHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCeeee
Q 003740 738 KHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 774 (799)
Q Consensus 738 K~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVGia 774 (799)
+.+.+++. .-+.+.|+||..+|..|-++|.|-|.
T Consensus 104 ---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 55555544 13679999999999998888866553
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.036 Score=61.78 Aligned_cols=94 Identities=14% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-HcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~-~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+...-+.++.+++. .+.-| +.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v------------------~~~KP-~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV------------------EKGKP-SP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc------------------CCCCC-CH
Confidence 357999999999999999999999999888877665 67886543444444431 12233 22
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee
Q 003740 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 739 ~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
.-+.+.+++. ..+.+.|+||..+|..|-+.|++-
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 3334444433 136689999999999999999975
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.061 Score=51.46 Aligned_cols=88 Identities=18% Similarity=0.275 Sum_probs=58.0
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
..||+.+.++.|++.|+++.++|+-....+....+.. +......++...+ + . ..| +..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~-~-~Kp--~~~ 122 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------F-G-AKP--EPE 122 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------C-C-CCc--CHH
Confidence 3479999999999999999999999999988887775 4322111111111 1 1 122 223
Q ss_pred HHHHHHHhCCC--EEEEEcCCccCHHhhhcCC
Q 003740 741 LVKHLRTTLGE--VVAVTGDGTNDAPALHEAD 770 (799)
Q Consensus 741 lV~~Lq~~~G~--vVa~~GDG~NDapAL~~Ad 770 (799)
....+.+++|- .++|+||..+|..|-++|+
T Consensus 123 ~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 33333333242 6899999999998877763
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.19 Score=52.74 Aligned_cols=86 Identities=13% Similarity=0.183 Sum_probs=61.1
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecC
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~---tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (799)
..++-||+.+.++.+++.|+++.++|+-... .+...-+..|+..... -.++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----------------------d~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----------------------EHLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----------------------ceEEeCCC
Confidence 4456899999999999999999999997643 3445567788853110 01444433
Q ss_pred cccHHHHHHHHHHhCCCEEEEEcCCccCHHhh
Q 003740 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL 766 (799)
...|..-.+.+.+. -.+|+++||-.+|....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhh
Confidence 34576666777655 56899999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.14 Score=55.96 Aligned_cols=98 Identities=22% Similarity=0.213 Sum_probs=61.5
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhh
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 723 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~ 723 (799)
-++.|++.++++.|+++|+++.++|+= ....+..+.+..||.- ....+.. ... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~-~~~---sd----- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICP-HFP---ED----- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeC-CcC---cc-----
Confidence 467899999999999999999999982 2334666777777741 1111110 000 00
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 724 ~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
. ..+ ..-|-.++..+.++++ ..+.|+||+.+|..+-+.|++-.
T Consensus 99 --~--~~~---rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 --N--CSC---RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred --c--CCC---CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0 001 1223344544444422 67999999999999999998864
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.12 Score=55.38 Aligned_cols=97 Identities=20% Similarity=0.194 Sum_probs=62.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-C-ceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-N-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~-~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
++.||+.+.++.|++.|+++.++|+-+......+-+..++... . -.++.+.+. ...-|.-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~------------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV------------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc------------------CCCCCCH
Confidence 5789999999999999999999999988888777665532211 0 011122210 1112211
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 738 K~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
.-+.+.+++. | ..+.|+||+.+|..|-++|++....-
T Consensus 206 -~~~~~a~~~~-~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 206 -DIYNLAAETL-GVDPSRCVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred -HHHHHHHHHh-CcChHHEEEEeCCHHhHHHHHHcCCEEEEE
Confidence 1223333333 4 56899999999999999999765443
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.11 Score=46.07 Aligned_cols=49 Identities=22% Similarity=0.339 Sum_probs=37.3
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA---~~~GI~~ 701 (799)
|++...+.+=||+.++|+.|+++|++++++|.....+...++ +.+||..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 566677888999999999999999999999999866654444 6678764
|
... |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.099 Score=52.63 Aligned_cols=91 Identities=16% Similarity=0.236 Sum_probs=60.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++-||+.++++.|++.|+++.++|+-... ...+.+.+|+...-+.++...+. ...-|. ..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~------------------~~~KP~-~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV------------------GAEKPD-PK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc------------------CCCCCC-HH
Confidence 56799999999999999999999976554 46777888885432222222211 011222 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCe
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdV 771 (799)
-+-+.+++. | ..+.|+||.. +|..+-++|++
T Consensus 165 ~~~~~~~~~-~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERA-GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHc-CCChhHEEEECCCchHHHHHHHHcCC
Confidence 333344433 4 5799999997 89988888765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.21 Score=50.97 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=58.2
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecC
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~t---A~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (799)
+-|.-|++.++++.+++.|++|+++||..... ...--++.|+..-..+++.+.+-. ....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~-----------------~~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS-----------------NKTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC-----------------CchH
Confidence 45778999999999999999999999999765 223335578753222333221100 0000
Q ss_pred cccHHHHHHHHHHhCC-CEEEEEcCCccCH
Q 003740 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G-~vVa~~GDG~NDa 763 (799)
-.-|...=+.+.+. | .+|+++||-.+|.
T Consensus 181 ~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 11166666677766 6 5889999999986
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.43 Score=58.49 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHH-HhCCCEEEEEcCCCHHHH
Q 003740 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAIC-RSAGITVRMVTGDNINTA 690 (799)
Q Consensus 612 ~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l-~~aGI~v~mlTGD~~~tA 690 (799)
++.....|.....|.+++- -|.|++-.....-.+-|+..++++.| ++.|+.|.++||....+.
T Consensus 584 ~~~i~~~y~~~~~rlI~LD----------------yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L 647 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLD----------------YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTL 647 (854)
T ss_pred HHHHHHHHHhhcCeEEEEe----------------cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHH
Confidence 3455666666666766653 23444422222335567999999996 778999999999999998
Q ss_pred HHHHHH---cCCccCCc
Q 003740 691 KAIARE---CGILTDNG 704 (799)
Q Consensus 691 ~aiA~~---~GI~~~~~ 704 (799)
...-.. +++..+++
T Consensus 648 ~~~f~~~~~l~laaEHG 664 (854)
T PLN02205 648 ADWFSPCEKLGIAAEHG 664 (854)
T ss_pred HHHhCCCCCeEEEEeCC
Confidence 887754 44554444
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.23 Score=48.17 Aligned_cols=92 Identities=22% Similarity=0.153 Sum_probs=60.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeecc-----hhhhccCHHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEG-----PEFREKSDEE 719 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~aiA~~~GI~~~~~~~~~g-----~~~~~~~~~~ 719 (799)
++-||+.++++.|++.|+++.++|.- ....+..+-+..|+.- ..++-+ .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d~ii~~~~~~~~~-------- 98 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF--DDVLICPHFPDDN-------- 98 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce--eEEEECCCCCCCC--------
Confidence 45689999999999999999999984 2445667778888741 111111 11
Q ss_pred HhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 720 ~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
+. ..-| |..+++.+.+++| +.+.|+||+.+|..+-+.|++-.
T Consensus 99 ---------~~-~~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 99 ---------CD-CRKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred ---------CC-CCCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 00 0122 2344444433334 45899999999999999998854
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.31 Score=50.70 Aligned_cols=94 Identities=16% Similarity=0.179 Sum_probs=60.6
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCceeecchhhhccCHHHHhhhcCCceE
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 729 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~--aiA~~~GI~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (799)
|.+.-...+-|++.++++.|+++|+++.++|.-....+. ...+++|+.. ..+.+++..+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~---------------- 80 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA---------------- 80 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH----------------
Confidence 445556778999999999999999999999996554444 5668899864 222222222110
Q ss_pred EEecCcccHHHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCC
Q 003740 730 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD 770 (799)
Q Consensus 730 ~ar~sP~dK~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~Ad 770 (799)
..-+.+.+++. .+..+.|+||+.+|...+..++
T Consensus 81 --------~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 --------VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred --------HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11222222221 1456899999988888875443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.35 Score=52.65 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=72.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~----~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
++.+++.++++.|++.|+.+.++|.-+...|..+-+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4579999999999999999999999999999999988 8875310 1112335
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeec
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
..|-..++.+.+++| .-++|+||...|..+.+++...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 567777776655534 6899999999999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.42 Score=46.61 Aligned_cols=91 Identities=13% Similarity=0.187 Sum_probs=57.6
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCH------------HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCce
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~------------~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (799)
+-||+.++++.|+++|+++.++|.-.. ..+..+-+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~----------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHA----------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCC-----------------
Confidence 349999999999999999999997544 24566778888842 11111111
Q ss_pred EEEecCcccHHHHHHHHHHhCC-----CEEEEEcCCc--------cCHHhhhcCCeee
Q 003740 729 VMARSSPMDKHTLVKHLRTTLG-----EVVAVTGDGT--------NDAPALHEADIGL 773 (799)
Q Consensus 729 v~ar~sP~dK~~lV~~Lq~~~G-----~vVa~~GDG~--------NDapAL~~AdVGi 773 (799)
...+ .|. -.+++.+.+++| +-+.||||.. +|..|-++|++-.
T Consensus 104 ~~~~-KP~--p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLYR-KPM--TGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCC-CCc--cHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0001 222 223333333324 5699999986 6998888887643
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.31 Score=45.28 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=35.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcC
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 698 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD-~~~tA~aiA~~~G 698 (799)
++.||+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777777
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.79 Score=45.62 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=33.6
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
.+...+.+|+++|++|+.+|.-....-...=+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 3678999999999999999999999888999999986
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.31 Score=49.81 Aligned_cols=95 Identities=13% Similarity=0.192 Sum_probs=63.9
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CccCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~G---I~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
++-++.||+.++++.|+++|+++.++|..+....+.+-+..+ +... +...+.. +.+ .
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-----------------f~~~fd~--~~g-~ 151 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-----------------FSGYFDT--TVG-L 151 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-----------------cceEEEe--Ccc-c
Confidence 445789999999999999999999999998887777766552 2210 0000110 111 1
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
-| +..-+.+.+++. | +.++|+||...|+.|-++|++-.
T Consensus 152 KP-~p~~y~~i~~~l-gv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 152 KT-EAQSYVKIAGQL-GSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred CC-CHHHHHHHHHHh-CcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 22 223344444443 4 56899999999999999999854
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.57 Score=45.48 Aligned_cols=75 Identities=21% Similarity=0.243 Sum_probs=59.8
Q ss_pred ccCCCcccHHHHHHHHHhCCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCc
Q 003740 657 IKDPMRPGVKESVAICRSAGI--TVRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI--~v~mlTGD-------~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (799)
=++.+-|+..+.+++|++.+. +|.++|-- +...|.++++.+||.
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--------------------------- 108 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--------------------------- 108 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc---------------------------
Confidence 467788999999999999987 59999986 589999999999986
Q ss_pred eEE--EecCcccHHHHHHHHHHh----CCCEEEEEcCC
Q 003740 728 QVM--ARSSPMDKHTLVKHLRTT----LGEVVAVTGDG 759 (799)
Q Consensus 728 ~v~--ar~sP~dK~~lV~~Lq~~----~G~vVa~~GDG 759 (799)
|+ ...-|.-..++.+.++.+ .-+-++|+||-
T Consensus 109 -vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDr 145 (168)
T PF09419_consen 109 -VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDR 145 (168)
T ss_pred -EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcch
Confidence 43 335786667788887643 13569999995
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.15 Score=51.58 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=56.5
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~t--A~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
-++.|++.+.++.|++.|+++.++|...... ........|+...-+.++...+ + ...-|.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~-----------------~-~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCL-----------------E-GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeee-----------------c-CCCCCC
Confidence 3578999999999999999999999876433 2222333444321111111111 0 011232
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-. -+-..+++. | +.++|+||...|..+-++|++-
T Consensus 155 p~-~~~~~~~~~-g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 155 PR-IYQLMLERL-GVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HH-HHHHHHHHc-CCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 21 222333333 4 5688889999999999999884
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.32 Score=50.66 Aligned_cols=65 Identities=18% Similarity=0.158 Sum_probs=47.8
Q ss_pred EEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcC--------CeeeecCCCCCHHHHHhcCC---ChHhH
Q 003740 729 VMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVELECCCF---NFSSR 794 (799)
Q Consensus 729 v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~A--------dVGiamgi~gtevak~aaDi---nf~si 794 (799)
+-.+..+.+|...++.+.+.++ ..++|+||+.||.+|++.+ ..|++|+ .|. .+..|+. +...+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~~~~v 235 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTGPQQV 235 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCCHHHH
Confidence 4455667899999999877745 4689999999999999999 5889895 342 2445565 55554
Q ss_pred HH
Q 003740 795 KT 796 (799)
Q Consensus 795 ~~ 796 (799)
..
T Consensus 236 ~~ 237 (244)
T TIGR00685 236 LE 237 (244)
T ss_pred HH
Confidence 43
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=91.26 E-value=0.62 Score=45.82 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=24.4
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNI 687 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~ 687 (799)
+.||+.++++.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 468999999999999999999998763
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=90.04 E-value=0.7 Score=58.34 Aligned_cols=92 Identities=15% Similarity=0.220 Sum_probs=65.4
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc-cCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
+-||+.+.++.|+++|+++.++|+-....+..+-+..||. ..-+.++.+++. .+.-|...
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~------------------~~~KP~Pe- 222 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF------------------ENLKPAPD- 222 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc------------------ccCCCCHH-
Confidence 5699999999999999999999999999999998999985 222333333321 12233221
Q ss_pred HHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCe
Q 003740 740 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdV 771 (799)
-+.+.+++. ..+.+.|+||..+|+.|-++|++
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCC
Confidence 112233322 03568999999999999999987
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=89.29 E-value=1 Score=44.98 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=57.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+..-. ...+ ...+.++.... |-
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-----------------~~~f-~~i~~~~~~~~-kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-----------------PGAF-SEVLMCGHDES-KE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-----------------CCcc-cEEEEeccCcc-cH
Confidence 36899999999999975 56666765555444455666664210 0000 01122333332 44
Q ss_pred HHHHHHHHhCC-CEEEEEcCCccCHHhhhcC--Cee
Q 003740 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~A--dVG 772 (799)
.+++...+++| +.++|+||..+|..|-++| ++-
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 55554444436 3578999999999999999 883
|
2 hypothetical protein; Provisional |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.53 E-value=0.57 Score=47.03 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=57.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~-~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.++++.|++.|+++.++|.-+.......-.. .|+...-+.++...+. ...-|. -
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~------------------~~~KP~-p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDL------------------GMRKPE-A 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEeccc------------------CCCCCC-H
Confidence 4689999999999999999999999876654433222 2442211112211111 111231 2
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.-+-..+++. | +-+.|+||...|..+-++|++-.
T Consensus 145 ~~~~~~~~~~-~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAE-GFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHc-CCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2222333333 4 56889999999999999998853
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=87.98 E-value=0.73 Score=47.43 Aligned_cols=90 Identities=21% Similarity=0.280 Sum_probs=58.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~---tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
+|.=|++.+.++.+++.|++|..+||.+.. ....=-++.|+...+.+++.+..-.. .....
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~----------------~~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS----------------KKSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS----------------S----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc----------------ccccc
Confidence 355688999999999999999999998654 22333456676532223222221000 00012
Q ss_pred ccHHHHHHHHHHhCC-CEEEEEcCCccCHHh
Q 003740 736 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapA 765 (799)
.-|...-+.+++. | ++++++||-.+|...
T Consensus 178 ~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 3488888888877 7 689999999999765
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=87.91 E-value=1.2 Score=48.28 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=39.3
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA---~~~GI~~ 701 (799)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 444444566699999999999999999999999977777776 5688753
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.74 E-value=0.69 Score=46.11 Aligned_cols=120 Identities=21% Similarity=0.240 Sum_probs=73.2
Q ss_pred CCcccHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCce--EEEecCc-
Q 003740 660 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ--VMARSSP- 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI-~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--v~ar~sP- 735 (799)
|+-|++.++|+.+++.|- .++++|--|..-...+-+..||..--..+.+-+.. .+......+.|... =+.+|-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~--~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPAC--VDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcc--cCCCCcEEeecCCCCCccCcCchh
Confidence 678999999999999996 99999999998888888888885310000000000 00000000011110 1222222
Q ss_pred ccHHHHHHHHHHhCC-------CEEEEEcCCccC-HHhhhcCCeeeecCCCCCHH
Q 003740 736 MDKHTLVKHLRTTLG-------EVVAVTGDGTND-APALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G-------~vVa~~GDG~ND-apAL~~AdVGiamgi~gtev 782 (799)
.=|..++..++.. + +.+-.+|||.|| +|.++...--+||--.|-++
T Consensus 162 mCKg~Vl~~~~~s-~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVAS-QLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHH-HhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 3477777777655 2 378999999999 67776666666666556554
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=87.59 E-value=0.89 Score=44.87 Aligned_cols=91 Identities=14% Similarity=0.065 Sum_probs=61.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe---cCcc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---SSPM 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar---~sP~ 736 (799)
++.|++.++++.|+ .++.++|+-+...+..+.+..|+...-+.++.+.+. -.+ .-|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~-----------------~~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTA-----------------NPDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecc-----------------cCccCCCCCC
Confidence 36789999999998 478999999999999999999986432233322221 111 2342
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
..-+-..+++. | +.++|+||...|..+=++|++-
T Consensus 144 -p~~~~~~~~~~-~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 144 -PQAYEKALREA-GVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred -HHHHHHHHHHh-CCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22222333332 4 5688999999999988888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.88 E-value=0.91 Score=46.25 Aligned_cols=92 Identities=12% Similarity=0.134 Sum_probs=61.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.+.++.| ++++.++|+.....+...=+..|+...- ..++.+.+.. +.-|. -
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~------------------~~KP~-p 145 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ------------------RWKPD-P 145 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC------------------CCCCC-h
Confidence 4468999999988 4999999999988888888888886432 1233332211 11221 1
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia 774 (799)
.-+...+++. | +.++|+||..+|..+=++|++...
T Consensus 146 ~~~~~a~~~~-~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 146 ALMFHAAEAM-NVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHHc-CCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2222333333 4 568999999999999999997664
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.60 E-value=1.3 Score=43.64 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=60.1
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~l 741 (799)
-|+ .+.++.|++. ++..++||.....+..+-+..|+...-+.++..++.. +.-|. -.+
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------------------~~KP~--p~~ 147 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ------------------HHKPA--PDT 147 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc------------------CCCCC--hHH
Confidence 354 5889999865 8999999999999999999999965333444333311 11222 222
Q ss_pred HHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 742 VKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 742 V~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
.+...+++| ..+.|+||..+|+.+-++|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 222222224 4578999999999999999874
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=85.34 E-value=0.97 Score=49.92 Aligned_cols=45 Identities=22% Similarity=0.352 Sum_probs=37.3
Q ss_pred ccHHHHHHHHHHhCC-----C-EEEEEcCCccCHHhhhc-----CCeeeecCCCCCH
Q 003740 736 MDKHTLVKHLRTTLG-----E-VVAVTGDGTNDAPALHE-----ADIGLAMGIAGTE 781 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G-----~-vVa~~GDG~NDapAL~~-----AdVGiamgi~gte 781 (799)
-+|..-|+.|.+.+| . .+.++||+.||-.|++. +++||+|| +|.+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~ 355 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK 355 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC
Confidence 499999999987755 2 25899999999999996 69999999 6654
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=84.93 E-value=5.3 Score=41.56 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=32.7
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHhhhc-CCeeeecC
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 776 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GD----G~NDapAL~~-AdVGiamg 776 (799)
-+|..-++.|+ . .+-|++.|| |-||.+||+. -=.|+++-
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 57888888888 5 678899999 8999999997 66688774
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=84.65 E-value=2.1 Score=45.29 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=44.0
Q ss_pred Cc-ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhh
Q 003740 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (799)
Q Consensus 661 ~R-~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~ 712 (799)
+| |++.+++++|+++|+++.++|+-....+...-+++||...-+.++.+.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 67 99999999999999999999999999999999999998654455544444
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=84.15 E-value=2.8 Score=43.96 Aligned_cols=50 Identities=28% Similarity=0.383 Sum_probs=38.3
Q ss_pred eeecccCC----CcccHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCccC
Q 003740 653 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTD 702 (799)
Q Consensus 653 g~~~~~D~----~R~~v~~aI~~l~~aGI~v~mlTGD~~~t---A~aiA~~~GI~~~ 702 (799)
|.+.-.+. +=|++.++|+.|+++|++++++||....+ .....+++|+...
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~ 66 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDIS 66 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 44444455 78899999999999999999999977665 4555566787543
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=83.33 E-value=4.6 Score=42.25 Aligned_cols=89 Identities=19% Similarity=0.259 Sum_probs=54.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecC
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA---~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (799)
+.|.=|++.+..+.+++.|++|+.+||.....-.+.. ++.|+.....+++.+..-. .....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~----------------~~~~a 206 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDN----------------SAENA 206 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCC----------------ccchh
Confidence 4566789999999999999999999999864322222 3468754322333221100 00001
Q ss_pred cccHHHHHHHHHHhCC-CEEEEEcCCccCH
Q 003740 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G-~vVa~~GDG~NDa 763 (799)
.+-|...=+.+.+. | .+++.+||-.+|-
T Consensus 207 v~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 207 VEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred HHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 12344444555555 6 5899999999996
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.11 E-value=3.6 Score=42.96 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=41.6
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc---CCcc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILT 701 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~---GI~~ 701 (799)
|.+.-.+.+=|++.++++.|++.|++++++|+....+...+++++ |+.-
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~ 61 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 61 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 555566778899999999999999999999999998888888774 6643
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=82.94 E-value=25 Score=43.13 Aligned_cols=159 Identities=20% Similarity=0.181 Sum_probs=79.0
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEE
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~v 323 (799)
.-|....+...|.+|-|.+.++ |+..-+|=-.+.|++.-|+-. +|. .+ ..|. .+.+|+-..-=...+.=|..
T Consensus 111 v~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~LTGES~PV~K~--~~~--~v--~aGT-~v~~G~~~~~V~~tG~~T~~ 182 (755)
T TIGR01647 111 VPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAALTGESLPVTKK--TGD--IA--YSGS-TVKQGEAEAVVTATGMNTFF 182 (755)
T ss_pred cCCCEEEECCCCEEeceEEEEe-cCceEEEcccccCCccceEec--cCC--ee--eccC-EEEccEEEEEEEEcCCccHH
Confidence 4677888999999999988885 444555666666766444432 121 11 2233 46666654432233333333
Q ss_pred cccchhHHHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHH
Q 003740 324 GMRTQWGKLMATLSEGG-DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402 (799)
Q Consensus 324 G~~T~~g~i~~~~~~~~-~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (799)
|. +.++++...... .-+..+.+....+......+++++.++.+ ......+.. .+...+.
T Consensus 183 g~---i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~----------------~~~~~i~ 242 (755)
T TIGR01647 183 GK---AAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF-FGRGESFRE----------------GLQFALV 242 (755)
T ss_pred HH---HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHH----------------HHHHHHH
Confidence 32 223333333222 22223333333443333332222222222 211111110 1334566
Q ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHH
Q 003740 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (799)
Q Consensus 403 ~av~ilvva~P~~Lplav~l~l~~~~~~ 430 (799)
..++..=.+.|..+|+++.++.....++
T Consensus 243 vlv~a~P~~Lp~~~~~~la~g~~r~ak~ 270 (755)
T TIGR01647 243 LLVGGIPIAMPAVLSVTMAVGAAELAKK 270 (755)
T ss_pred HHHHhCCcchHHHHHHHHHHHHHHHHhC
Confidence 6777777888888888888877655443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=82.77 E-value=2.8 Score=44.42 Aligned_cols=51 Identities=20% Similarity=0.149 Sum_probs=42.2
Q ss_pred Cc-ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchh
Q 003740 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711 (799)
Q Consensus 661 ~R-~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~ 711 (799)
+| |++.+++++|+++|+++.++|+-+...+..+.+..|+...-..++.+.+
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 46 8999999999999999999998888888999999999754444444444
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=82.39 E-value=5.9 Score=37.98 Aligned_cols=108 Identities=20% Similarity=0.267 Sum_probs=71.6
Q ss_pred eecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHc-----CCccCCceeecchhhhccCHHHHhhhcC
Q 003740 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---REC-----GILTDNGIAIEGPEFREKSDEELSKLIP 725 (799)
Q Consensus 654 ~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA---~~~-----GI~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (799)
++|- |-.++++.+.++.+++.|++++-+|+....-|...- .+. ++. .+.++..++ .+...+.
T Consensus 22 ~~G~-d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~-------~l~~al~ 91 (157)
T PF08235_consen 22 ILGK-DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPD-------SLFSALH 91 (157)
T ss_pred ccCc-hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCc-------chhhhhh
Confidence 3443 689999999999999999999999999866554432 222 332 222222211 1111111
Q ss_pred CceEEEecCcccHHHHHHHHHHh----CCCEEEEEcCCccCHHhhhcCCee
Q 003740 726 KIQVMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 726 ~~~v~ar~sP~dK~~lV~~Lq~~----~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
+ .+..+-.-+.|...++.++.. ....++..|...+|+.|-++++|-
T Consensus 92 r-Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 R-EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred c-cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0 144554557899999999875 257888999999999998877653
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=81.86 E-value=36 Score=43.18 Aligned_cols=194 Identities=13% Similarity=0.094 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh----h-cCceeEE----EeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeece
Q 003740 211 LLVVFVTATSDYKQSLQFKDLDRE----K-KKITVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS 281 (799)
Q Consensus 211 llv~~~~~~~~~~~~~~~~~l~~~----~-~~~~v~V----~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~ 281 (799)
.++.+..-.......+++.++... . +.....| +.-|....+...|.+|.|.+.++..+ +=+|=-.+.|++
T Consensus 118 ~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTGES 196 (997)
T TIGR01106 118 GCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTGES 196 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccccCCCC
Confidence 334455555666666666665331 1 1212222 24688899999999999999997653 446666677776
Q ss_pred eEEecccccCCCCccccC----CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCC-CCCCChhHHHHHHHHHH
Q 003740 282 VLINESSLTGESEPVNVN----ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-GDDETPLQVKLNGVATI 356 (799)
Q Consensus 282 l~vDeS~lTGEs~pv~k~----~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~-~~~~tplq~~l~~~a~~ 356 (799)
.-+.-..-..+..|.... .+. .+.+|+...-=...+.=|..|.-. ++++..... ..-...+.+..+.+..+
T Consensus 197 ~pv~K~~~~~~~~~~~~~n~l~~Gt-~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~pl~~~~~~~~~~~~~~ 272 (997)
T TIGR01106 197 EPQTRSPEFTHENPLETRNIAFFST-NCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKTPIAIEIEHFIHIITGV 272 (997)
T ss_pred CceeccCCCcccCccccCCeEEecc-EeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCCcHHHHHHHHHHHHHHH
Confidence 444332211111222221 344 477776433222334445555433 333222221 22234555666667666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Q 003740 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFA 427 (799)
Q Consensus 357 ~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~ 427 (799)
...+++++.++.++.. ..+.. .+...+...++.+=.+.|..++++...+....
T Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m 325 (997)
T TIGR01106 273 AVFLGVSFFILSLILG-YTWLE-----------------AVIFLIGIIVANVPEGLLATVTVCLTLTAKRM 325 (997)
T ss_pred HHHHHHHHHHHHHHhc-CCHHH-----------------HHHHHHHHHhhcCCccchHHHHHHHHHHHHHH
Confidence 5555554444433221 11110 12223444555566677888888887765543
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=81.70 E-value=66 Score=41.09 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=58.0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcc-hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEE
Q 003740 165 VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAH-DG-LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQV 242 (799)
Q Consensus 165 ~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~-d~-~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V 242 (799)
+.+|+-|.+-....+.+.-+++.++ |+ +. +...+++++++++.....++++++..+ .+....
T Consensus 162 ~s~~~ll~~~~~~p~~i~~i~~~~l----------~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~---~L~~~~--- 225 (1054)
T TIGR01657 162 PSFLELLKEEVLHPFYVFQVFSVIL----------WLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQ---RLRDMV--- 225 (1054)
T ss_pred CCHHHHHHHHHhchHHHHHHHHHHH----------HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhh---
Confidence 3455555554444444444444332 33 33 233344555555555555555544322 222321
Q ss_pred EeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe---eceeEEecccccCC
Q 003740 243 ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS---GFSVLINESSLTGE 292 (799)
Q Consensus 243 ~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~---g~~l~vDeS~lTGE 292 (799)
.......| +.-|....+..-|.+|-|.++++ |..+-+|=-.+.|+
T Consensus 226 -~~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 226 -HKPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred -cCCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 11222222 23588899999999999999997 65566676667773
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=81.13 E-value=19 Score=39.55 Aligned_cols=47 Identities=21% Similarity=0.140 Sum_probs=37.4
Q ss_pred CcceeeeeecccC--CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003740 647 EGYTCIGIVGIKD--PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (799)
Q Consensus 647 ~~~~~lg~~~~~D--~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA 694 (799)
-|.||+-++.-.| .+-++..++|++|. .|+.|.++||........+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 4566665554333 47789999999999 78999999999999998884
|
|
| >PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures | Back alignment and domain information |
|---|
Probab=80.95 E-value=0.12 Score=41.14 Aligned_cols=53 Identities=11% Similarity=0.208 Sum_probs=45.1
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcc
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQ 97 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 97 (799)
..|.++.++++.+.+++..+.+++...++.+.|+.. ..+..++...++++||.
T Consensus 10 ~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~--~~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 10 EGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD--KTSIEKIIEAIEKAGYE 62 (62)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT--TSCHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC--CCCHHHHHHHHHHhCcC
Confidence 456778899999999999999999999999999776 45567888888888884
|
These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 799 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 7e-60 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-59 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-58 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 7e-56 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-55 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-55 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-55 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-54 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 5e-37 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 5e-31 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-11 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 4e-11 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 4e-11 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 4e-11 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 6e-11 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 6e-11 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 7e-11 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 2e-10 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 4e-08 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 1e-05 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 7e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 799 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-174 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-173 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-154 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-138 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-138 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-37 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-37 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-26 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-25 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 3e-25 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-23 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-22 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 9e-11 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 6e-09 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 8e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 9e-05 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 1e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 3e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-04 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 6e-04 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 6e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 529 bits (1364), Expect = e-174
Identities = 202/725 (27%), Positives = 310/725 (42%), Gaps = 94/725 (12%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V + +K TS T G+S S G N +V L ++
Sbjct: 58 VAELEQKYQTSATKGLSASLA--AELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMW 115
Query: 181 VCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKD 230
V A + L+ + + L + ++ VV VT Y Q + FK+
Sbjct: 116 VAAAICLIAFAIQASEGDLTTDDNLYLALA--LIAVVVVTGCFGYYQEFKSTNIIASFKN 173
Query: 231 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
L ++ V R+G + +I+ L+ GD+V + GD+VPAD + ++ SSLT
Sbjct: 174 LVPQQ----ATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLT 229
Query: 291 GESEPV--NVNALNPFLL-------SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
GESEP + + L T G+ + LV G RT G++ + S +
Sbjct: 230 GESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVEN 289
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
++TP+ +++ II + + F F V + G L + F
Sbjct: 290 EKTPIAIEIEHFVDIIAGLAILFGATFFIVAM---------------CIGYTFLRAMVF- 333
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461
+ IVV VPEGL VT+ L+ K++ + +V++L A ET+GS + ICSDKTGTL
Sbjct: 334 --FMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTL 391
Query: 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ-------SIFNNTGGEVV 514
T N MTV I D ++ + + L + + F + V
Sbjct: 392 TQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVP 451
Query: 515 IGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 573
+ + ++G +ETA+L+F L G+ R+ V PFNS K + L +
Sbjct: 452 VPKR---IVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDP 508
Query: 574 --GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631
+ KGA E +L C L G+ +PL+E R L
Sbjct: 509 RDPRHVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQ 567
Query: 632 MEI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVT 683
+ + G F +A PT G + G+V + DP R V ++V CR+AGI V MVT
Sbjct: 568 LYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVT 627
Query: 684 GDNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDEE 719
GD+ TAKAIA GI+++ I G + ++ E
Sbjct: 628 GDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSE 687
Query: 720 LSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777
L + + V AR+SP K +V+ + LG +VAVTGDG ND+PAL +ADIG+AMGI
Sbjct: 688 LVEALRTHPEMVFARTSPQQKLVIVESCQ-RLGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 778 AGTEV 782
AG++
Sbjct: 747 AGSDA 751
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 526 bits (1357), Expect = e-173
Identities = 209/724 (28%), Positives = 314/724 (43%), Gaps = 92/724 (12%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
++ + K T +T G++ + G N T P W+ L ++L
Sbjct: 53 LDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110
Query: 181 VCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKD 230
+ A++ + ATE P + LG+V + VV VT Y Q + FK+
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDNLYLGVV--LSTVVIVTGCFSYYQEAKSSRIMDSFKN 168
Query: 231 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
+ ++ V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLT
Sbjct: 169 MVPQQ----ALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLT 224
Query: 291 GESEPV--NVNAL--NPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
GESEP + NP T G+ + +V G RT G++ S
Sbjct: 225 GESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEV 284
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
TP+ +++ II + +F V F + + G LE + F
Sbjct: 285 GRTPIAIEIEHFIHIITGVAVFLGVSFFILSL---------------ILGYSWLEAVIF- 328
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461
+ I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTGTL
Sbjct: 329 --LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTL 386
Query: 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF--NNTGGEVVIGEGN 519
T N MTV +I E D ++ ++ L + N G+ N
Sbjct: 387 TQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRA--VFQAGQDN 444
Query: 520 ----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--- 572
K + G +E+A+L+ L G Q R + + PFNS K + E
Sbjct: 445 VPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSS 504
Query: 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACM 632
E + + KGA E IL C L NG PL E + R L
Sbjct: 505 ESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHF 563
Query: 633 EI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684
+ G F AD P PT +G++ + DP R V ++V CRSAGI V MVTG
Sbjct: 564 ALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTG 623
Query: 685 DNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDEEL 720
D+ TAKAIA+ GI+++ + G + ++ S E L
Sbjct: 624 DHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVL 683
Query: 721 SKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
++ V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMGI+
Sbjct: 684 DDILHYHTEIVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 779 GTEV 782
G++V
Sbjct: 743 GSDV 746
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 475 bits (1224), Expect = e-154
Identities = 201/738 (27%), Positives = 310/738 (42%), Gaps = 96/738 (13%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
E S T G++ + + R E YG N+ + W V E D+ + IL
Sbjct: 10 TEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 67
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKDLDR 233
+ A +S V+ EG V ILL++ A Q +++ K+ +
Sbjct: 68 LAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQERNAENAIEALKEYEP 125
Query: 234 EKKKITVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADG--LFVSGFSVLINESSL 289
E +V R + ++I D++PGDIV + +GD+VPAD L + ++ +++S L
Sbjct: 126 E----MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 181
Query: 290 TGESEPV--NVNALNP----------FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLS 337
TGES V + + L SGT + G +V T G+ T+ GK+ ++
Sbjct: 182 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241
Query: 338 EGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397
D+TPLQ KL+ + K+ V + + + G
Sbjct: 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLI---NIGH-----FNDPVHGGSWIRGA 293
Query: 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK 457
+ +F IAV + V A+PEGLP +T LA ++M A+VR L + ET+G + ICSDK
Sbjct: 294 IYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDK 353
Query: 458 TGTLTTNHMTVLKACICEEIKEVDNSK-------------------GTPAFGSSIPASAS 498
TGTLTTN M+V K I +++ S P
Sbjct: 354 TGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDG-LV 412
Query: 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE-- 556
+L N E +G TETA+ + R SK+ +
Sbjct: 413 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 472
Query: 557 --------------PFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNS 597
F+ +K M V + G ++ KGA E ++ C+
Sbjct: 473 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR-V 531
Query: 598 NGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY------ 649
VP+ + I+++ + LR L LA + + + +
Sbjct: 532 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 591
Query: 650 -TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----G 704
T +G+VG+ DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 592 LTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 651
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAP 764
A G EF + E + + AR P K +V++L+ + E+ A+TGDG NDAP
Sbjct: 652 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQ-SYDEITAMTGDGVNDAP 710
Query: 765 ALHEADIGLAMGIAGTEV 782
AL +A+IG+AMG +GT V
Sbjct: 711 ALKKAEIGIAMG-SGTAV 727
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 430 bits (1107), Expect = e-138
Identities = 148/660 (22%), Positives = 285/660 (43%), Gaps = 83/660 (12%)
Query: 126 EKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALV 185
+ L T G+++ E + +R+ YG+N+ E F + ++ A++
Sbjct: 78 DMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQFVMEGAAVL 134
Query: 186 SLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245
+ E W D I +LL V +++ +L ++ + V R+
Sbjct: 135 A----AGLEDWV----DFGVICGLLLLNAVVGFVQEFQAGSIVDEL-KKTLALKAVVLRD 185
Query: 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVL-INESSLTGESEPVNVNALNPF 304
G ++I +++PGDI+ + G +PADG V+ + L +++S+LTGES V+ + +
Sbjct: 186 GTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQ- 244
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
+ + + V+ G +++T G T G+ A ++ LNG+ TI+ + +F
Sbjct: 245 VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFT 304
Query: 365 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424
++ + + + ++ILEF + I ++ VP GLP VT ++
Sbjct: 305 LLIVWVSSF---------------YRSNPIVQILEF---TLAITIIGVPVGLPAVVTTTM 346
Query: 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484
A + KA+V+ L+A E++ +CSDKTGTLT N +++ + D
Sbjct: 347 AVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPED--- 403
Query: 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQ 544
L+L + ++ + + A L+ L +
Sbjct: 404 ---------------LMLTACLAA----------SRKKKGIDAIDKAFLKS-LKYYPRAK 437
Query: 545 AERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPL 604
+ K+++ PF+ V K++ V+E P+G KGA +L + E P+
Sbjct: 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVE-------EDHPI 490
Query: 605 NEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664
E + +FA+ R+L +A + +GI+ DP R
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSW-----------EILGIMPCMDPPRHD 539
Query: 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSK 722
++V ++ G++++M+TGD + A+ +R+ G+ T+ N + + E+
Sbjct: 540 TYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYD 599
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782
+ A P K+ +V+ L+ G +VA+TGDG NDAP+L +AD G+A+ ++
Sbjct: 600 FVEAADGFAEVFPQHKYNVVEILQ-QRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDA 657
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 429 bits (1105), Expect = e-138
Identities = 142/669 (21%), Positives = 272/669 (40%), Gaps = 83/669 (12%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+E + ++L S +G++T E R +I+G NK E + + + ++
Sbjct: 19 IEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVME 74
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-FKDLDREKKKI- 238
+ A++++ + G + I+ ++ + +T + + +
Sbjct: 75 MAAIMAIALANGD-----GRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLA 129
Query: 239 -TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN 297
+V R+G + L+PGDIV + +GD +PAD + G + +++S+LTGES PV
Sbjct: 130 PKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVT 189
Query: 298 VNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI- 356
+ + SG+ + G + +V G+ T +GK A L + + Q L +
Sbjct: 190 KHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQKVLTAIGNFC 247
Query: 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGL 416
I I + + + + ++ + +++ +P +
Sbjct: 248 ICSIAIGMVIEIIVMYP---------------IQRRKYRDGIDN---LLVLLIGGIPIAM 289
Query: 417 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 476
P +++++A ++ A+ + + A E M +CSDKTGTLT N ++V K +
Sbjct: 290 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVF 349
Query: 477 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 536
K V+ ++LL + ++ E + A++
Sbjct: 350 CKGVEK---------------DQVLLFAAMA-----------SRVEN-QDAIDAAMVGM- 381
Query: 537 LLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLN 596
D + R + V PFN V K+ + G + KGA E IL
Sbjct: 382 ---LADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA----- 433
Query: 597 SNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656
+ + I+K+A LR+L +A + + P + +G++
Sbjct: 434 ------KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKES---PGAPWEFVGLLP 484
Query: 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA---IEGPEFR 713
+ DP R E++ + G+ V+M+TGD + K R G+ T+ + + +
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544
Query: 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
+ + +LI K A P K+ +VK L+ +V +TGDG NDAPAL +ADIG+
Sbjct: 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGI 603
Query: 774 AMGIAGTEV 782
A+ T+
Sbjct: 604 AVA-DATDA 611
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 1e-37
Identities = 130/559 (23%), Positives = 208/559 (37%), Gaps = 152/559 (27%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 134 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDESMISGEPVPVLK 192
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 193 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI--AVTIVVVAVPEGL 416
L A+ F W + L FA + ++VVA P
Sbjct: 252 PTVLLVAISAFIY---------------WYFIAHAPLL----FAFTTLIAVLVVACPCAF 292
Query: 417 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 476
LA +L M K L+++ A E T++ DKTGTLT
Sbjct: 293 GLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT-------------- 338
Query: 477 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT---------- 526
KG P +P G++ E+L
Sbjct: 339 -------KGKPEVTDLVPL---------------------NGDERELLRLAAIAERRSEH 370
Query: 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEI 586
P AI++ +A ++ + E + + GVV A I
Sbjct: 371 PIAEAIVK---------KALEHGIELGEPEKVEVIAGE-GVV--------------ADGI 406
Query: 587 ILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT 646
++ + + G V N + +EK EA + +A
Sbjct: 407 LVGN-KRLMEDFGVAVS------NEVELALEKLEREAKTAVIVA---RNGRV-------- 448
Query: 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 449 -----EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------- 496
Query: 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
D V+A P K VK L+ EVVA GDG NDAPAL
Sbjct: 497 ----------DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPAL 534
Query: 767 HEADIGLAMGIAGTEVELE 785
+AD+G+A+G +G++V +E
Sbjct: 535 AQADLGIAVG-SGSDVAVE 552
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 6e-37
Identities = 120/562 (21%), Positives = 209/562 (37%), Gaps = 159/562 (28%)
Query: 242 VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL 301
+ +G ++S+ ++ GD++ + G+++P DG G S ++ES +TGE PV A
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEPIPVAKEAS 288
Query: 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
++ T Q GS M VG T +++ +S+ P+Q +A +
Sbjct: 289 AK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQ----RLADTVSGW- 342
Query: 362 LFF-------AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF-FAIAVTIVVVAVP 413
F AV++F V W G L + AV+++++A P
Sbjct: 343 --FVPAVILVAVLSFIV---------------WALLGPQP--ALSYGLIAAVSVLIIACP 383
Query: 414 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 473
L LA +S+ + K L+++ A E M ++ DKTGTLT
Sbjct: 384 CALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLT----------- 432
Query: 474 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT------- 526
+G P +V + + L
Sbjct: 433 ----------EGHPKLT---------------------RIVTDDFVEDNALALAAALEHQ 461
Query: 527 ---PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583
P AI+ A+ + + VE F + G V +
Sbjct: 462 SEHPLANAIVHA---------AKEKGLSLGSVEAFEAPT------------GKGVVGQVD 500
Query: 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 643
+ + + +G L E ++ + + +A + +
Sbjct: 501 GHHVAIGNARLMQEHG-------GDNAPLFEKADELRGKGASVMFMA---VDGKT----- 545
Query: 644 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703
+ ++ ++DP++ E++ + +GI + M+TGD+ TA+A+A GI
Sbjct: 546 --------VALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI---- 593
Query: 704 GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763
+ V+A P DK +V L+ G +VA+ GDG NDA
Sbjct: 594 -------------KK----------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDA 629
Query: 764 PALHEADIGLAMGIAGTEVELE 785
PAL +ADIG+AMG GT+V +E
Sbjct: 630 PALAKADIGIAMG-TGTDVAIE 650
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 29/134 (21%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
I I D RP +K+ + ++ G+ + +++GD + K +++E I
Sbjct: 128 IASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI------------ 175
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
E + SP DK +++ L+ G V + GDG NDA AL AD+
Sbjct: 176 -----QE----------YYSNLSPEDKVRIIEKLKQN-GNKVLMIGDGVNDAAALALADV 219
Query: 772 GLAMGIAGTEVELE 785
+AMG G ++
Sbjct: 220 SVAMG-NGVDISKN 232
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 30/134 (22%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ + D +RP +E+++ ++ GI M+TGDN AK +A E G+
Sbjct: 136 SGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL------------ 183
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D+ A P +K VK ++ V A+ GDG NDAPAL +AD+
Sbjct: 184 -----DD----------YFAEVLPHEKAEKVKEVQQ--KYVTAMVGDGVNDAPALAQADV 226
Query: 772 GLAMGIAGTEVELE 785
G+A+G AGT+V +E
Sbjct: 227 GIAIG-AGTDVAVE 239
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 3e-25
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 30/134 (22%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 155 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 202
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 203 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 245
Query: 772 GLAMGIAGTEVELE 785
G+A+G +G++V +E
Sbjct: 246 GIAVG-SGSDVAVE 258
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 2e-23
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 30/134 (22%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 527 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 574
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 575 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 617
Query: 772 GLAMGIAGTEVELE 785
G+A+G +G++V +E
Sbjct: 618 GIAVG-SGSDVAVE 630
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 7e-14
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 19/230 (8%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 212 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 270
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 271 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
L A+ F W + L F + ++VVA P L
Sbjct: 330 PTVLLVAISAFIY---------------WYFIAHAPLL--FAFTTLIAVLVVACPCAFGL 372
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
A +L M K L+++ A E T++ DKTGTLT V
Sbjct: 373 ATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV 422
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 1e-22
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCK 581
L +TA+LE + A AS+ K++ PF+ +++M VV+ ++ CK
Sbjct: 32 LKNLLDTAVLEGT----DEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCK 87
Query: 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD 641
GA + IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 88 GALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY 146
Query: 642 APIPTEGYTCIGIVGIKDP 660
G + D
Sbjct: 147 QRADESDLILEGYIAFLDH 165
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 58.6 bits (143), Expect = 9e-11
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 13 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 71
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRT 327
+ + + T G K+ T VG T
Sbjct: 72 SKGDE-VFGATINNTGVLKIRATRVGGET 99
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 6e-09
Identities = 16/118 (13%), Positives = 33/118 (27%), Gaps = 10/118 (8%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKS 716
+R G +E VA I +++G + N + +
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
+ K +++ L ++ + GD D A +D+ A
Sbjct: 137 PH------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMI-GDSVTDVEAAKLSDLCFA 187
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 3e-07
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 249 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 308
++ + + GDI+ + G + P DG + G S +++ES +TGE+ PV G
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPVAKKP-------G 86
Query: 309 TKV------QNGSCKMLVTTVGMRT 327
+ V QNGS + T VG T
Sbjct: 87 STVIAGSINQNGSLLICATHVGADT 111
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 3e-07
Identities = 72/488 (14%), Positives = 136/488 (27%), Gaps = 169/488 (34%)
Query: 211 LLVVFVTATSDYKQSLQFKDL---------DREKKKITVQVAR-NGFRRKISIYDLL--- 257
+L VF + + KD+ E I + +G R ++ L
Sbjct: 21 ILSVFE---DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR---LFWTLLSK 74
Query: 258 PGDIVHLCMGDQVPAD-GLFVSGFSVLINESSLTGES---------------EPVNVNAL 301
++V + + + + +S + S+ NV+ L
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 302 NPFLLSGTKVQNGSCKM----LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATII 357
P+L K++ ++ V G+ G
Sbjct: 135 QPYL----KLRQALLELRPAKNVLIDGV-------------LG----------------S 161
Query: 358 GKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSG-----DDALEILEFFAIAVTIVVVAV 412
GK V V + K+ W + LE+L+ + +
Sbjct: 162 GK-----TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 413 PEG---LPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469
+ + L + S+ +++++ K L L VL
Sbjct: 217 SDHSSNIKLRIH-SIQAELRRLLKSKPYENCL-------------------L------VL 250
Query: 470 KACICEEIKEVDNSKGTPAFGSSIPASASKLLL----QSIFN----NTGGEVVIGEGNKT 521
V N+K AF S K+LL + + + T + + + T
Sbjct: 251 L--------NVQNAKAWNAFNLS-----CKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 522 EILGTPTETAILEFGLLLGGDFQAE-RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580
TP E L L Q R+ P ++ ++ E R
Sbjct: 298 L---TPDEVKSL-LLKYLDCRPQDLPREVLTT---NPR-----RLSIIAES----IRDG- 340
Query: 581 KGASEIILAACDKFLNSNGE-VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS 639
LA D + + N + + + E+++N L + + L + F
Sbjct: 341 -------LATWDNWKHVNCDKLTTIIESSLNVLEPAEYR---KMFDRLSV--------FP 382
Query: 640 ADAPIPTE 647
A IPT
Sbjct: 383 PSAHIPTI 390
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 6e-06
Identities = 86/645 (13%), Positives = 174/645 (26%), Gaps = 202/645 (31%)
Query: 6 NENFSDVKAKNTSEEALQR--WRKLCGFVKNRKRRFRFTANLSKRFE--AEAIRRSNQEK 61
E + + R W L + ++F L ++ I+ ++
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFW-TLLSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQP 105
Query: 62 FRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG-- 119
+ + + + + + ++Y V + EL K + + G
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL------RPAKNVLIDGVL 159
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
G G K T + + L+ + + K + FW+ + T++ +
Sbjct: 160 GS-G---K--TWVA-----LDVCLSYKVQ----CKM---DFKIFWLNLKNCNSPETVLEM 201
Query: 180 AVCALVSLVVGIATEGWPKGAH--------DGLGIVMSILLVVFVTATSDYKQSLQFKDL 231
L L+ I + H + + LL + Y+ L L
Sbjct: 202 ----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL-----KSKPYENCLL--VL 250
Query: 232 D--REKKKITVQVARNGF----R-----RKISIYDLLPGDIV-HLCMGDQVP------AD 273
+ K N F + R + D L H+ +
Sbjct: 251 LNVQNAKAW------NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 274 GLFVSGFSVLINESSLTGESEPVNVNALNPFLLS--GTKVQNGSCKMLVTTVGMRTQWGK 331
L + + L P V NP LS +++G W
Sbjct: 305 SLLLK--YLDCRPQDL-----PREVLTTNPRRLSIIAESIRDGLA--------TWDNW-- 347
Query: 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKL---QEGTHWT 388
V + + TII V+ A + +F +L H
Sbjct: 348 --------------KHVNCDKLTTIIES---SLNVLEPAEY-RKMF-DRLSVFPPSAHIP 388
Query: 389 -------WSG---DDALEILEFFAIAVTIVVVAVPEGL------PLAVTL-SLAFAMK-K 430
W D + ++ L +++ S+ +K K
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKL----------HKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 431 MMNDKALVRHLAACETMGSATSICSDKTGTLTTN---------HMTVLKACICEEIKEVD 481
+ N+ AL H + + + SD + H+ K ++
Sbjct: 439 LENEYAL--HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL-----------KNIE 485
Query: 482 NSKGTPAF-----------------GSSIPASASKL-LLQS-------IFNNTGG-EVVI 515
+ + F ++ AS S L LQ I +N E ++
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 516 GE------GNKTEILGTPTETAILEFGLLLGGDF---QAERQASK 551
+ ++ + T +L L+ + +A +Q +
Sbjct: 546 NAILDFLPKIEENLICSK-YTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 8e-06
Identities = 66/500 (13%), Positives = 135/500 (27%), Gaps = 171/500 (34%)
Query: 45 LSKRFEAEAIRRSNQEKFRVAVLV-------SQAALQFIHGLNLSSEYTVPEEVAASGFQ 97
LSK E + I S L + +F+ + L Y + S +
Sbjct: 46 LSKE-EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV-LRINY----KFLMSPIK 99
Query: 98 ICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTE 157
+ + + ++ +++ + A K + +S + L R+ + +
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFA-KYN------VSRLQPYLKLRQALLEL----- 147
Query: 158 SPARGFWVYVWEALHDM-----TLMILAVCALVSLVVGIATEG---WPK-GAHDGLGIVM 208
PA+ V + + T + L VC S V + W + V+
Sbjct: 148 RPAK----NV--LIDGVLGSGKTWVALDVCL--SYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 209 SILLVVFVTATSDYKQSLQFKDLDREKK-KITVQVARNGFRRKISIYDLLPGDIVHLCMG 267
+L + ++ D K+ + + RR +
Sbjct: 200 EMLQKLLYQIDPNWTSRS-----DHSSNIKLRIHSIQAELRRLLK--------------- 239
Query: 268 DQVPADGLFVSGFSVLINESSLTGESEPV-NVNALNPFLLSGTKVQNGSCKMLVTTVGMR 326
+ + L V L+N V N A N F N SCK+L+TT R
Sbjct: 240 SKPYENCLLV-----LLN----------VQNAKAWNAF--------NLSCKILLTT---R 273
Query: 327 TQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH 386
+ V + T
Sbjct: 274 FK-----------------------QVTDFLSAAT---TTHISLDHHSMTLTPD------ 301
Query: 387 WTWSGDDALEILEFFAIAVTIVVVAVPE----GLPLAVTLSLAFAMKKMMNDKALVRHLA 442
E+ + +P P +++ +A +++ + +H+
Sbjct: 302 ---------EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLATWDNWKHV- 350
Query: 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV--------DNSKGTPAFGSSIP 494
C+ + + + VL+ E +++ ++ IP
Sbjct: 351 NCDKLTTIIESS-----------LNVLEP---AEYRKMFDRLSVFPPSAH--------IP 388
Query: 495 ASASKLLLQSIFNNTGGEVV 514
LL I+ + V
Sbjct: 389 TI----LLSLIWFDVIKSDV 404
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 17/120 (14%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+ G E V+ + V +G + D + ++
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DAAFSNT----LIVENDA 128
Query: 720 LS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLA 774
L+ + + K ++ L+ L + V GDG ND A I +A
Sbjct: 129 LNGLVTGHMMFSHS-----KGEMLLVLQRLLNISKTNTLVV-GDGANDLSMFKHAHIKIA 182
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 9e-05
Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 23/123 (18%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
+ PG+ + + ++ G +++G + + + D + E D
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DYAFSNT----VEIRDNV 232
Query: 720 LS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADI 771
L+ + I M+ + L ++A GDG ND P L A
Sbjct: 233 LTDNITLPI--------MNAANKKQTLVDLAARLNIATENIIAC-GDGANDLPMLEHAGT 283
Query: 772 GLA 774
G+A
Sbjct: 284 GIA 286
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} Length = 26 | Back alignment and structure |
|---|
Score = 38.6 bits (89), Expect = 1e-04
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 21 ALQRWRKLCGFVKNRKRRFRFTANL 45
A QRWR VKNR RRFR +NL
Sbjct: 1 ARQRWRSSVSIVKNRARRFRMISNL 25
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 30/120 (25%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI--------LTDNGIAIEGPEFRE 714
G E V R V +++ ++ + R+ G D+ + G + R+
Sbjct: 72 EGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQ 130
Query: 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
K K V ++ V+A GD ND L EA G+
Sbjct: 131 KDP--------------------KRQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGIL 169
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 25/124 (20%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 715
P+ P + E VA + G V + +G + + + + D N + I
Sbjct: 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSL--DYAQSNTLEIV------- 228
Query: 716 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 770
+L+ +++ ++ V A++ K ++ L VAV GDG ND + A
Sbjct: 229 -SGKLTGQVLGEV-VSAQT----KADILLTLAQQYDVEIHNTVAV-GDGANDLVMMAAAG 281
Query: 771 IGLA 774
+G+A
Sbjct: 282 LGVA 285
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
PG++E V+ + + V +++G + + +A + I N A +F + E +
Sbjct: 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR-LKFYF--NGEYAG 145
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEADIGLAMG 776
K ++K L+ +++ + GDG D A AD + G
Sbjct: 146 FDETQPTAESGG---KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFG 197
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 6e-04
Identities = 35/148 (23%), Positives = 50/148 (33%), Gaps = 32/148 (21%)
Query: 665 VKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEF-------- 712
VK A C G+ V NI+ + L N I E
Sbjct: 90 VKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQ 149
Query: 713 -----REKSDEELSKLIPKIQVMARSSPM---------DKHTLVKHLRTTLG----EVVA 754
E+ ++E+ IP ++ R P K + + G E ++
Sbjct: 150 MTPFITEEEEKEVLPSIPTCEIG-RWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMS 208
Query: 755 VTGDGTNDAPALHEADIGLAMGIAGTEV 782
GDG ND L A IG+AMG A +V
Sbjct: 209 F-GDGGNDISMLRHAAIGVAMGQAKEDV 235
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 799 | |||
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.93 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.93 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.92 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.91 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.87 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.87 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.83 | |
| 4aqr_D | 57 | Calcium-transporting ATPase 8, plasma membrane-TY; | 99.45 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.19 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.18 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.13 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.09 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.04 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.02 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.99 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.92 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.92 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.72 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.69 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.69 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.67 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.65 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.64 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.62 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.6 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.58 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.55 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.55 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.54 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.53 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.53 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.52 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.51 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.48 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.4 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.39 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.38 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.37 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.35 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.35 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.34 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.33 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.31 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.29 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.28 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.23 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.23 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.2 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.18 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.17 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.15 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.14 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.12 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.11 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.11 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.07 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 98.06 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.02 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.0 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.0 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.0 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.0 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.99 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.98 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.98 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.97 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.96 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.96 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.95 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.93 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.92 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.92 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.91 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.89 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.87 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.84 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.83 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.82 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.81 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.77 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.77 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.76 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.75 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.75 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.74 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.73 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.73 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.69 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.67 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.67 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.64 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.63 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.59 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.54 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.52 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.51 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.48 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.41 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.4 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.33 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.32 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.32 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.21 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.13 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.12 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.09 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.05 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.0 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.98 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.97 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.88 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.85 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.76 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.74 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.74 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.56 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.51 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.51 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.48 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.11 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.08 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.01 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.97 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 95.93 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.8 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.77 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.52 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.47 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.34 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.3 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.3 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.93 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.87 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.67 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.5 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 94.39 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 93.48 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 92.26 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 91.29 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 90.76 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 88.36 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 88.25 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 85.84 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.15 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 85.1 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 84.66 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 84.49 | |
| 3dxs_X | 74 | Copper-transporting ATPase RAN1; CXXC motif, ferre | 84.12 |
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-108 Score=1012.06 Aligned_cols=654 Identities=30% Similarity=0.424 Sum_probs=553.7
Q ss_pred hCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc--C
Q 003740 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE--G 195 (799)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~--~ 195 (799)
...++++++.|+++...||+.++ +.+|+++||+|.++.++.+|+|+.++++|++++.++|+++++++++++.... +
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 127 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATE 127 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccc
Confidence 45789999999999999999876 9999999999999998899999999999999999999999999988754320 1
Q ss_pred ---CCCCcchhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCC
Q 003740 196 ---WPKGAHDGLGIVMSILLVVFVTATSDYKQSL----QFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (799)
Q Consensus 196 ---~~~~~~d~~~i~~~illv~~~~~~~~~~~~~----~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd 268 (799)
+...|++++.+ +++++++++..+.|++ ..++|.+ ..+..++|+|||++++|+++||+|||||.|++||
T Consensus 128 ~~~~~~~~~~~~~i----~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd 202 (1028)
T 2zxe_A 128 DEPANDNLYLGVVL----STVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGD 202 (1028)
T ss_dssp CCCCCHHHHHHHHH----HHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTC
T ss_pred cccccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCC
Confidence 11234454443 4444555555555554 3445544 4466999999999999999999999999999999
Q ss_pred eecccEEEEeeceeEEecccccCCCCccccCCCC---------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCC
Q 003740 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (799)
Q Consensus 269 ~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~---------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (799)
+|||||+|++|++|.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|+|++++.++
T Consensus 203 ~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 282 (1028)
T 2zxe_A 203 RIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGL 282 (1028)
T ss_dssp BCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHS
T ss_pred EeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCC
Confidence 9999999999988999999999999999998654 4799999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHH
Q 003740 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (799)
Q Consensus 340 ~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lpla 419 (799)
+.+++|+|+.+++++.++..+++++++++|+++++ . +. .+...+.++++++|++|||+||++
T Consensus 283 ~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~-----~~----------~~~~~~~~~i~llv~~iP~~Lp~~ 344 (1028)
T 2zxe_A 283 EVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------SWLEAVIFLIGIIVANVPEGLLAT 344 (1028)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T-----TC----------CHHHHHHHHHHHHHHHSCTTHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c-----cC----------cHHHHHHHHHHHHHHHcCchHHHH
Confidence 99999999999999999999998888877766421 1 00 245677888999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 003740 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (799)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (799)
+|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..+..............+...
T Consensus 345 vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1028)
T 2zxe_A 345 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWS 424 (1028)
T ss_dssp HHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHH
T ss_pred HHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999987765432111000000011123334
Q ss_pred HHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC---
Q 003740 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--- 572 (799)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~--- 572 (799)
.+....++|+++.++.+..+ ..+..|+|+|.||++++...+.+....+..+++++.+||+|.+|||+++++.+
T Consensus 425 ~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~ 504 (1028)
T 2zxe_A 425 ALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSS 504 (1028)
T ss_dssp HHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTT
T ss_pred HHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCC
Confidence 45566677776666432221 33568999999999999887667777788899999999999999999999864
Q ss_pred CCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCC--------CCCCC
Q 003740 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPI 644 (799)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~--------~~~~~ 644 (799)
++++.+++||+||.|+++|+++. .+|...+++++.++.+.+.++.|+++|+||+++|||+++.+.. .....
T Consensus 505 ~~~~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~ 583 (1028)
T 2zxe_A 505 ESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNF 583 (1028)
T ss_dssp TCCEEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCS
T ss_pred CCcEEEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhh
Confidence 46788999999999999999864 5677889999999999999999999999999999999865311 11134
Q ss_pred CCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC---------------------
Q 003740 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--------------------- 703 (799)
Q Consensus 645 ~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--------------------- 703 (799)
.+.|++|+|+++|+||+||+++++|+.|+++||+|+|+|||+..||.+||++|||..++
T Consensus 584 ~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~ 663 (1028)
T 2zxe_A 584 PTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPR 663 (1028)
T ss_dssp CCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGG
T ss_pred hhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhcccc
Confidence 57899999999999999999999999999999999999999999999999999998542
Q ss_pred ---ceeecchhhhccCHHHHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCC
Q 003740 704 ---GIAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (799)
Q Consensus 704 ---~~~~~g~~~~~~~~~~~~~~~~~~--~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~ 778 (799)
..+++|+++..+.++++.+.+.+. .+|||++|+||..+|+.+|+. |++|+|+|||+||+|||++||||||||++
T Consensus 664 ~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~ 742 (1028)
T 2zxe_A 664 DAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIS 742 (1028)
T ss_dssp GCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSS
T ss_pred ccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEEEcCCcchHHHHHhCCceEEeCCc
Confidence 358899999999999988887655 499999999999999999999 99999999999999999999999999988
Q ss_pred CCHHHHHhcCC-----ChHhHHHhh
Q 003740 779 GTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 779 gtevak~aaDi-----nf~si~~~i 798 (799)
|+|+||++||+ ||++|+++|
T Consensus 743 gtd~ak~aAD~Vl~~~~~~~I~~~i 767 (1028)
T 2zxe_A 743 GSDVSKQAADMILLDDNFASIVTGV 767 (1028)
T ss_dssp CCHHHHHHCSEEETTCCTHHHHHHH
T ss_pred cCHHHHHhcCEEecCCCHHHHHHHH
Confidence 99999999999 899999876
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-107 Score=999.34 Aligned_cols=659 Identities=29% Similarity=0.395 Sum_probs=562.1
Q ss_pred hhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcc---
Q 003740 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT--- 193 (799)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~--- 193 (799)
+...++++++.|++++..||+.++ +.+|+++||+|+++.++.+|+|+.++++|++++.++++++++++++.+...
T Consensus 54 ~~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~ 131 (1034)
T 3ixz_A 54 HQLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASE 131 (1034)
T ss_pred hhCCHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhcc
Confidence 346799999999999999999987 999999999999999999999999999999999999999999888765321
Q ss_pred cC--CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeec
Q 003740 194 EG--WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVP 271 (799)
Q Consensus 194 ~~--~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vP 271 (799)
.+ ....|++++.+++.+++..++..+.+++.++..++|.+. .+..++|+|||++++|+++||||||||.|++||+||
T Consensus 132 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l-~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VP 210 (1034)
T 3ixz_A 132 GDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNL-VPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVP 210 (1034)
T ss_pred CCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceec
Confidence 11 112466666665555555555556666655555666553 456899999999999999999999999999999999
Q ss_pred ccEEEEeeceeEEecccccCCCCccccCCC---------CCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCC
Q 003740 272 ADGLFVSGFSVLINESSLTGESEPVNVNAL---------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342 (799)
Q Consensus 272 aDg~ll~g~~l~vDeS~lTGEs~pv~k~~~---------~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 342 (799)
|||+|++|+++.||||+|||||.|+.|..+ .+++|+||.+.+|.++++|++||.+|++|+|++++.+.+..
T Consensus 211 AD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~ 290 (1034)
T 3ixz_A 211 ADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENE 290 (1034)
T ss_pred CCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccC
Confidence 999999999899999999999999999643 35689999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHH
Q 003740 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTL 422 (799)
Q Consensus 343 ~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l 422 (799)
+||+|+++++++.++..+++++++++|+++++. + ..+...|..++++++++||||||+++|+
T Consensus 291 ~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~i~l~v~~iPe~Lp~~vti 352 (1034)
T 3ixz_A 291 KTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--------G----------YTFLRAMVFFMAIVVAYVPEGLLATVTV 352 (1034)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c----------chHHHHHHHHHHHHHheeccccHHHHHH
Confidence 999999999999999998888887777665321 0 0366788899999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHH
Q 003740 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502 (799)
Q Consensus 423 ~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (799)
++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.++++.+..+..+............+......+.
T Consensus 353 ~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (1034)
T 3ixz_A 353 CLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALC 432 (1034)
T ss_pred HHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987665433221111001111123344455
Q ss_pred HHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC---Cc
Q 003740 503 QSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE---GG 575 (799)
Q Consensus 503 ~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~---~~ 575 (799)
..+.+|+++.+..+.+. .....|+|+|.|+++++...+.+....+..++++..+||+|.+|+|++++...+ ++
T Consensus 433 ~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~ 512 (1034)
T 3ixz_A 433 RVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPR 512 (1034)
T ss_pred HHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCcc
Confidence 66677776665543322 346789999999999999888888888899999999999999999988877543 56
Q ss_pred EEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCC--------CCCCCCCC
Q 003740 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTE 647 (799)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~--------~~~~~~~~ 647 (799)
+.+++|||||.|+++|+.+. .+|...|++++.++.+.+.++.|+.+|+||+++|||.++.+.. ...+..+.
T Consensus 513 ~~l~~KGApe~il~~c~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~ 591 (1034)
T 3ixz_A 513 HVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTS 591 (1034)
T ss_pred EEEEEeCChHHHHHHhHHhh-cCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhcccc
Confidence 89999999999999999877 4677889999999999999999999999999999999875311 11234578
Q ss_pred cceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------
Q 003740 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------- 704 (799)
Q Consensus 648 ~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~----------------------- 704 (799)
|++|+|+++++||+||+++++|++|+++||+|+|+|||+..||.++|++|||..++.
T Consensus 592 ~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 671 (1034)
T 3ixz_A 592 GLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDAR 671 (1034)
T ss_pred CcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccc
Confidence 999999999999999999999999999999999999999999999999999975432
Q ss_pred -eeecchhhhccCHHHHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCH
Q 003740 705 -IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (799)
Q Consensus 705 -~~~~g~~~~~~~~~~~~~~~~~~--~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gte 781 (799)
.+++|.++..++++++.+.+.+. .+|+|++|+||.++|+.+|+. |++|+|+|||.||+|||++||||||||++|+|
T Consensus 672 ~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d 750 (1034)
T 3ixz_A 672 ACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750 (1034)
T ss_pred eeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEEECCcHHhHHHHHHCCeeEEeCCccCH
Confidence 48899999999999988887654 499999999999999999998 99999999999999999999999999999999
Q ss_pred HHHHhcCC-----ChHhHHHhh
Q 003740 782 VELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 782 vak~aaDi-----nf~si~~~i 798 (799)
+||++||+ ||.+|+++|
T Consensus 751 ~aK~aAD~Vl~~~~~~gI~~ai 772 (1034)
T 3ixz_A 751 AAKNAADMILLDDNFASIVTGV 772 (1034)
T ss_pred HHHHhcCEEeccCCchHHHHHH
Confidence 99999999 999999887
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-105 Score=982.62 Aligned_cols=667 Identities=30% Similarity=0.429 Sum_probs=557.1
Q ss_pred hCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCC-
Q 003740 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW- 196 (799)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~- 196 (799)
...++++++.|+++...||+.++ +.+|+++||+|.++.++.+++|+.++++|+++.++++++++++++++++...+.
T Consensus 7 ~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~ 84 (995)
T 3ar4_A 7 SKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEE 84 (995)
T ss_dssp GSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSG
T ss_pred hCCHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 35789999999999999999876 999999999999999889999999999999999999999999999988764321
Q ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCe--EEEEecCCCCcccEEEecCCCeeccc
Q 003740 197 -PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF--RRKISIYDLLPGDIVHLCMGDQVPAD 273 (799)
Q Consensus 197 -~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~--~~~i~~~~LvvGDiv~l~~Gd~vPaD 273 (799)
...|++++.+++.+++..++..+.+++.++..++|.+ ..+..++|+|||+ .++|+++||+|||+|.|++||+||||
T Consensus 85 ~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 85 TITAFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred chhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 2368888887776666666666666666666777765 4566999999887 69999999999999999999999999
Q ss_pred EEEEee--ceeEEecccccCCCCccccCCCC------------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCC
Q 003740 274 GLFVSG--FSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (799)
Q Consensus 274 g~ll~g--~~l~vDeS~lTGEs~pv~k~~~~------------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (799)
|+|+++ .+|.||||+|||||.|+.|..+. +++|+||.|.+|.++++|++||.+|++|+|++++.++
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 999754 45899999999999999998652 6899999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHH
Q 003740 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (799)
Q Consensus 340 ~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lpla 419 (799)
+.+++|+|+++++++.++.++++++++++|+++...+ .....+. .| ...+..+|..++++++++|||+||++
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~----~~~~~~~~~~ai~l~v~aiP~~Lp~~ 315 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF--NDPVHGG--SW----IRGAIYYFKIAVALAVAAIPEGLPAV 315 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG--GSCSSSS--CH----HHHHHHHHHHHHHHHHHHSCTTHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccc--hH----HHHHHHHHHHHHHHHHHhcCcchHHH
Confidence 9999999999999999999988877776655432111 0000010 01 12345677889999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeee---------eecCCCCCCCCC
Q 003740 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK---------EVDNSKGTPAFG 490 (799)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~---------~~~~~~~~~~~~ 490 (799)
+|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+ ..+.....+...
T Consensus 316 vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 395 (995)
T 3ar4_A 316 ITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGE 395 (995)
T ss_dssp HHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCC
T ss_pred HHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccc
Confidence 99999999999999999999999999999999999999999999999999998764321 111110001000
Q ss_pred --------CCCChhHHHHHHHHHHhcCCceEEecC-CCceEEcCCchHHHHHHHHHHcCC-Ch--H-------------H
Q 003740 491 --------SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGLLLGG-DF--Q-------------A 545 (799)
Q Consensus 491 --------~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~~~~~g~-~~--~-------------~ 545 (799)
.....+....+....++|+++.+..++ ++..+..|+|+|.|++.++.+.|. +. . .
T Consensus 396 ~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~ 475 (995)
T 3ar4_A 396 VLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSV 475 (995)
T ss_dssp EEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhh
Confidence 000112233445566677777665432 344566899999999999988765 11 1 2
Q ss_pred HhhhcceEEEecCCCCCceEEEEEEeCCC-----cEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHH-
Q 003740 546 ERQASKIVKVEPFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF- 619 (799)
Q Consensus 546 ~~~~~~i~~~~~F~s~~k~~~vv~~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~- 619 (799)
.+..+++++.+||+|+||||+++++.+++ ++.+++||+||.|+++|+++.. ++...|++++.++.+.+.+++|
T Consensus 476 ~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 554 (995)
T 3ar4_A 476 IRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWG 554 (995)
T ss_dssp HHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHH
T ss_pred hhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHHHHHHHHHH
Confidence 45678999999999999999999987555 5889999999999999998765 3467899999999999999999
Q ss_pred -HHhccceeeEEEEEcCCCCCCC-------CCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003740 620 -ASEALRTLCLACMEIGNEFSAD-------APIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK 691 (799)
Q Consensus 620 -a~~g~r~l~~a~~~~~~~~~~~-------~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~ 691 (799)
+++|+||+++|||+++...... ....|.|++|+|+++++||+||+++++|+.|+++||+|+|+|||+..||.
T Consensus 555 ~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~ 634 (995)
T 3ar4_A 555 TGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAI 634 (995)
T ss_dssp HSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred hhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHH
Confidence 9999999999999886432110 11236799999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCccCC----ceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhh
Q 003740 692 AIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (799)
Q Consensus 692 aiA~~~GI~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~ 767 (799)
++|++|||...+ +.+++|+++..++++++.+.+.+..+|||++|+||.++|+.||++ |++|+|+|||+||+|||+
T Consensus 635 ~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~alk 713 (995)
T 3ar4_A 635 AICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALK 713 (995)
T ss_dssp HHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHHH
T ss_pred HHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHH
Confidence 999999997643 468999999999999999998889999999999999999999999 999999999999999999
Q ss_pred cCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 768 EADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 768 ~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+|||||||| +|+|+||++||+ ||++|+++|
T Consensus 714 ~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 714 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp HSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred HCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 999999999 999999999999 899999876
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-105 Score=957.49 Aligned_cols=593 Identities=23% Similarity=0.391 Sum_probs=509.5
Q ss_pred HHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchh
Q 003740 124 IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDG 203 (799)
Q Consensus 124 l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~ 203 (799)
++..|+++...||+.++ +.+|+++||+|.++.+ ..++|..++++|+++..++++++++++++++ .|+++
T Consensus 76 ~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~-~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g--------~~~~~ 144 (920)
T 1mhs_A 76 PEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEE-KENHFLKFLGFFVGPIQFVMEGAAVLAAGLE--------DWVDF 144 (920)
T ss_dssp SSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCC-CCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS--------CSSHH
T ss_pred HHHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hHHHH
Confidence 35578998889999977 9999999999999855 4778899999999999999999999887764 57888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeece-e
Q 003740 204 LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-V 282 (799)
Q Consensus 204 ~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~-l 282 (799)
+.+++.+++..++..+.+|+.++..++|.+. .+..++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ +
T Consensus 145 ~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l-~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l 223 (920)
T 1mhs_A 145 GVICGLLLLNAVVGFVQEFQAGSIVDELKKT-LALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFL 223 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCcee
Confidence 7776666666777777888777777777653 4568999999999999999999999999999999999999999995 8
Q ss_pred EEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHH
Q 003740 283 LINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGL 362 (799)
Q Consensus 283 ~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l 362 (799)
.||||+|||||.|+.|..++ .+|+||.|.+|.++++|++||.+|++|+|.+++++++..++|+|+.+++++.++..+.+
T Consensus 224 ~VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~ 302 (920)
T 1mhs_A 224 QVDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVI 302 (920)
T ss_dssp EEBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccCCCCcceEecCCC-eeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876 59999999999999999999999999999999999988899999999999998887766
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccc
Q 003740 363 FFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442 (799)
Q Consensus 363 ~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~ 442 (799)
++++++|+.+ ++... .+..+|..+++++|++||||||+++|++++.++.+|+++|++||+++
T Consensus 303 ~~~~i~~~~~---------------~~~~~---~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~ 364 (920)
T 1mhs_A 303 FTLLIVWVSS---------------FYRSN---PIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLS 364 (920)
T ss_dssp HHHHHHHHTT---------------TTTTC---CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred HHHHHHHHHH---------------HhcCC---cHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 5554443321 11111 25678889999999999999999999999999999999999999999
Q ss_pred hhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceE
Q 003740 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTE 522 (799)
Q Consensus 443 a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 522 (799)
++|+||++|+||||||||||+|+|+|.+++..+.. + +.+ ++ ...++|+... ..
T Consensus 365 aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~---~------------~~~---ll-~~a~l~~~~~----~~---- 417 (920)
T 1mhs_A 365 AIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV---D------------PED---LM-LTACLAASRK----KK---- 417 (920)
T ss_dssp THHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC---C------------CTH---HH-HHHHHSCCCS----SC----
T ss_pred hhhhhccCcEEEECCCCCccccceeEEEEeecCCC---C------------HHH---HH-HHHHHhcCCc----cc----
Confidence 99999999999999999999999999887653221 0 112 22 2334443221 00
Q ss_pred EcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEe
Q 003740 523 ILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVV 602 (799)
Q Consensus 523 ~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~ 602 (799)
.+||+|.|+++++.+.+.. ......+++++.+||+|.+|+|+++++.++++..+++||+||.++++|+. ..
T Consensus 418 -~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~ 488 (920)
T 1mhs_A 418 -GIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DH 488 (920)
T ss_dssp -SCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SS
T ss_pred -CCChHHHHHHHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc-------cC
Confidence 2499999999998776532 22345678999999999999999999876677788999999999999974 13
Q ss_pred eCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEE
Q 003740 603 PLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMV 682 (799)
Q Consensus 603 ~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~ml 682 (799)
+++++.++.+.+.+++|+.+|+|++++||+. .+.+++|+|+++|+||+||+++++|+.|+++||+|+|+
T Consensus 489 ~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-----------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~Mi 557 (920)
T 1mhs_A 489 PIPEEVDQAYKNKVAEFATRGFRSLGVARKR-----------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKML 557 (920)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-----------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEEEec-----------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEE
Confidence 5778888889999999999999999999863 14678999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCcc----CCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcC
Q 003740 683 TGDNINTAKAIARECGILT----DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGD 758 (799)
Q Consensus 683 TGD~~~tA~aiA~~~GI~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GD 758 (799)
||||+.||.+||++|||.. .+..+++|. ..++++++.+.+.+..||||++|+||.++|+.||++ |++|+||||
T Consensus 558 TGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GD 634 (920)
T 1mhs_A 558 TGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-GYLVAMTGD 634 (920)
T ss_dssp ESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-TCCCEECCC
T ss_pred cCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 9999999999999999964 234566776 567888899999999999999999999999999999 999999999
Q ss_pred CccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 759 GTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 759 G~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|+||+|||++|||||||| +|+|+||++||+ ||++|++++
T Consensus 635 GvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai 678 (920)
T 1mhs_A 635 GVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDAL 678 (920)
T ss_dssp CGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHH
T ss_pred CcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHH
Confidence 999999999999999999 999999999999 999999886
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-104 Score=954.75 Aligned_cols=607 Identities=23% Similarity=0.348 Sum_probs=496.2
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (799)
..++++++.|+++ ..||+.++ +.+|++.||+|.++.++ +++|+.++++|++++.++++++++++++++... +.+.
T Consensus 17 ~~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~~ 91 (885)
T 3b8c_A 17 IPIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRPP 91 (885)
T ss_dssp SSTTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSCS
T ss_pred CCHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccc
Confidence 3456677778887 68999877 99999999999998776 778888999999999999999999998887532 3445
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~ 278 (799)
.|+|++.|++.+++..++..+.+++.++..++|.+ ..+..++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 92 ~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~-~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~ 170 (885)
T 3b8c_A 92 DWQDFVGIICLLVINSTISFIEENNAGNAAAALMA-GLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLE 170 (885)
T ss_dssp CCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTT-SCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEE
Confidence 78998776655555555555566655556666655 34568999999999999999999999999999999999999999
Q ss_pred eceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHH
Q 003740 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (799)
Q Consensus 279 g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~ 358 (799)
|+++.||||+|||||.|+.|..++. +|+||.|.+|.++++|++||.+|++|+|.+++++ ...++|+|+.+++++.++.
T Consensus 171 g~~l~VdES~LTGES~Pv~K~~g~~-v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~ 248 (885)
T 3b8c_A 171 GDPLKVDQSALTGESLPVTKHPGQE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCI 248 (885)
T ss_dssp SSCBCCCCCSTTCCSSCCCBSSCCC-CCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHH
T ss_pred cCcccccccccCCCCcceEecCCCc-cccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHH
Confidence 9988999999999999999998775 9999999999999999999999999999998877 5678999999999988743
Q ss_pred H-HHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhh
Q 003740 359 K-IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKAL 437 (799)
Q Consensus 359 ~-~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~il 437 (799)
. +++.++++++++| +. .+. ++...|..++++++++|||+||+++|+++++++++|+++|++
T Consensus 249 ~~~~~~~~~~~~~~~----~~----~~~----------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~il 310 (885)
T 3b8c_A 249 CSIAIGMVIEIIVMY----PI----QRR----------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 310 (885)
T ss_dssp HHHHHHHHHHSTTTT----TT----TCS----------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHH----HH----ccC----------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeE
Confidence 3 2222222222211 00 000 122457789999999999999999999999999999999999
Q ss_pred hcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecC
Q 003740 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (799)
Q Consensus 438 vr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 517 (799)
||+++++|+||++|+||||||||||+|+|+|.+.++. .+. ...++ .+++..+.+++. .
T Consensus 311 vk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~-----------~~~~~--~~ll~~aa~~~~-~------ 368 (885)
T 3b8c_A 311 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFC-----------KGVEK--DQVLLFAAMASR-V------ 368 (885)
T ss_dssp CSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSC-----------SSTTH--HHHHHHHHHHCC-S------
T ss_pred eCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccC-----------CCCCH--HHHHHHHHHHhC-C------
Confidence 9999999999999999999999999999999642210 000 00111 223333333332 1
Q ss_pred CCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccccccc
Q 003740 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNS 597 (799)
Q Consensus 518 ~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~ 597 (799)
.++||+|.|+++++.+ ....+..+++++.+||+|.+|+|+++++..+++...++||+||.++++|+.
T Consensus 369 -----~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~---- 435 (885)
T 3b8c_A 369 -----ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA---- 435 (885)
T ss_dssp -----SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC----
T ss_pred -----CCCCchHHHHHHHhhc----hhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccC----
Confidence 1579999999987642 112234567888999999999999988765666778999999999999963
Q ss_pred CCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCC
Q 003740 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGI 677 (799)
Q Consensus 598 ~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI 677 (799)
+++.++.+.+.+++|+++|+|++++||++++.+. .+..+.+++|+|+++|+||+|||++++|+.|+++||
T Consensus 436 -------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~---~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI 505 (885)
T 3b8c_A 436 -------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT---KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGV 505 (885)
T ss_dssp -------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTC
T ss_pred -------chhhHHHHHHHHHHHHhCCCeEEEEEEecccccc---ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCC
Confidence 1122334677888999999999999999886532 234567899999999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccC--Cceeecchhhhc-cCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEE
Q 003740 678 TVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFRE-KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVA 754 (799)
Q Consensus 678 ~v~mlTGD~~~tA~aiA~~~GI~~~--~~~~~~g~~~~~-~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa 754 (799)
+|+|+||||+.||.+||+++||..+ ...++.|++++. +++.++.+.+.+..||||++|+||.++|+.||++ |++|+
T Consensus 506 ~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Va 584 (885)
T 3b8c_A 506 NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVG 584 (885)
T ss_dssp CCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCC
T ss_pred cEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHC-CCeEE
Confidence 9999999999999999999999643 235778888876 6777778888888999999999999999999999 99999
Q ss_pred EEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 755 VTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 755 ~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|||||+||+|||++|||||||| +|+|+||++||+ ||++|+++|
T Consensus 585 m~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 585 MTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp BCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred EEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHH
Confidence 9999999999999999999999 999999999999 899999876
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-83 Score=757.90 Aligned_cols=511 Identities=25% Similarity=0.352 Sum_probs=420.0
Q ss_pred CCCccHHHHHHHHHhhHHHHHHHHH------HHHHHHhhhc-----c------cCCCCCcchhHHHHHHHHHHHHHHHHH
Q 003740 158 SPARGFWVYVWEALHDMTLMILAVC------ALVSLVVGIA-----T------EGWPKGAHDGLGIVMSILLVVFVTATS 220 (799)
Q Consensus 158 ~~~~~f~~~~~~~l~~~~~~il~i~------a~is~~~~~~-----~------~~~~~~~~d~~~i~~~illv~~~~~~~ 220 (799)
..+++||+..|+++++....|..+. |++..++.+. . .+..+.|||+++++++++++ +
T Consensus 128 ~~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~ll------g 201 (736)
T 3rfu_A 128 WGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLL------G 201 (736)
T ss_dssp TTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHH------H
T ss_pred HhhHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHH------H
Confidence 3689999999999987654442222 2221111111 1 12235789988766554443 6
Q ss_pred HHHHHHHH-------HHHhhhhcCceeEEEe-CCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCC
Q 003740 221 DYKQSLQF-------KDLDREKKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292 (799)
Q Consensus 221 ~~~~~~~~-------~~l~~~~~~~~v~V~R-~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGE 292 (799)
+|.+.++. ++|.+ +.+..++|+| ||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+||||
T Consensus 202 ~~le~~a~~~~~~ai~~L~~-l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGE 279 (736)
T 3rfu_A 202 QVLELKAREQTGSAIRALLK-LVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGE 279 (736)
T ss_dssp HHHHHHHHCCCSSHHHHHTC-CCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-EeeecccCCc
Confidence 66666653 33333 4566888887 9999999999999999999999999999999999986 9999999999
Q ss_pred CCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003740 293 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVM 372 (799)
Q Consensus 293 s~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~ 372 (799)
|.|+.|..++. +++||.+.+|+++++|+++|.+|.+|+|++++.+++..++|+|+.+|+++.+|.++++++++++|++|
T Consensus 280 S~Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w 358 (736)
T 3rfu_A 280 PIPVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVW 358 (736)
T ss_dssp SSCEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEeccCCc-CCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998886 99999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCcee
Q 003740 373 VQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATS 452 (799)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~ 452 (799)
.+.. .. . .+...|..++++++++|||+||+++|+++..++.+++++|+++|+++++|+||++|+
T Consensus 359 ~~~~-------~~-~--------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 359 ALLG-------PQ-P--------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp HHHC-------SS-S--------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCE
T ss_pred HHhC-------CC-c--------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCE
Confidence 5321 00 0 133568899999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHH
Q 003740 453 ICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 532 (799)
Q Consensus 453 I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~Al 532 (799)
||||||||||+|+|+|.+++..+.. .++.+.+. .... ..+.||+++|+
T Consensus 423 i~fDKTGTLT~g~~~v~~i~~~~~~----------------~~~~l~~a---a~le-------------~~s~hPla~Ai 470 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIVTDDFV----------------EDNALALA---AALE-------------HQSEHPLANAI 470 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEEESSSC----------------HHHHHHHH---HHHH-------------HSSCCHHHHHH
T ss_pred EEEeCCCCCcCCceEEEEEEecCCC----------------HHHHHHHH---HHHh-------------hcCCChHHHHH
Confidence 9999999999999999998832210 11233322 1111 12779999999
Q ss_pred HHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHH
Q 003740 533 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612 (799)
Q Consensus 533 l~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~ 612 (799)
++++...+... ....+|++..++ ++....++..+ .+|+++.+...+.. ...+
T Consensus 471 v~~a~~~~~~~---------~~~~~f~~~~g~-gv~~~~~g~~~---~~G~~~~~~~~~~~---------------~~~~ 522 (736)
T 3rfu_A 471 VHAAKEKGLSL---------GSVEAFEAPTGK-GVVGQVDGHHV---AIGNARLMQEHGGD---------------NAPL 522 (736)
T ss_dssp HHHHHTTCCCC---------CCCSCCCCCTTT-EEEECSSSSCE---EEESHHHHHHHCCC---------------CHHH
T ss_pred HHHHHhcCCCc---------cCcccccccCCc-eEEEEECCEEE---EEcCHHHHHHcCCC---------------hhHH
Confidence 99998776542 234578877765 44444444443 45998877554321 0235
Q ss_pred HHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHH
Q 003740 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 692 (799)
Q Consensus 613 ~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~a 692 (799)
.+..+.++.+|+|++++|+ |.+++|+++++|++||+++++|+.|+++|++++|+|||+..+|.+
T Consensus 523 ~~~~~~~~~~G~~vl~va~----------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ 586 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAV----------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEA 586 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEE----------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 5667889999999999984 568999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee
Q 003740 693 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 693 iA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
+|+++||.. ++++++|+||.++|+.||++ |+.|+|+|||+||+|||++||||
T Consensus 587 ia~~lgi~~---------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvG 638 (736)
T 3rfu_A 587 VAGTLGIKK---------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIG 638 (736)
T ss_dssp HHHHHTCCC---------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEE
T ss_pred HHHHcCCCE---------------------------EEEecCHHHHHHHHHHHHhc-CCEEEEEECChHhHHHHHhCCEE
Confidence 999999975 99999999999999999999 99999999999999999999999
Q ss_pred eecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 773 LAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 773 iamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|||| +|+|+||++||+ |+..|+++|
T Consensus 639 IAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai 668 (736)
T 3rfu_A 639 IAMG-TGTDVAIESAGVTLLHGDLRGIAKAR 668 (736)
T ss_dssp EEES-SSCSHHHHHCSEEECSCCSTTHHHHH
T ss_pred EEeC-CccHHHHHhCCEEEccCCHHHHHHHH
Confidence 9999 999999999999 899988776
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-84 Score=770.80 Aligned_cols=608 Identities=24% Similarity=0.273 Sum_probs=464.8
Q ss_pred ccccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHhhCCH
Q 003740 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGV 121 (799)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v 121 (799)
+..|..+.|+.+.+.+++.+++||+.+.++.+.|++. ..+..++.++++..||.+.+.+.....+.++.+.+.+...+
T Consensus 13 Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~--~~~~~~i~~ai~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (723)
T 3j09_A 13 CAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEK--RIDFETIKRVIEDLGYGVVDEQAAVSAEVEHLSRMKRKLYV 90 (723)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHCCEESSCCCCCCCCCCCCCCSCCCSSS
T ss_pred chHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCC--cCCHHHHHHHHHhcCCcccccccccchhhHHHHHHHHHHHH
Confidence 3467788899999999999999999999999999765 45677888899999998876543221111222222222223
Q ss_pred HHHHH----HhCCCccCCCCccHHHHHHHHHhcCCCccCC----CCCccHHHHHHHHHhhHHHHH------HHHHHHHHH
Q 003740 122 EGIAE----KLSTSITDGISTSEHLLNRRKEIYGINKFTE----SPARGFWVYVWEALHDMTLMI------LAVCALVSL 187 (799)
Q Consensus 122 ~~l~~----~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~----~~~~~f~~~~~~~l~~~~~~i------l~i~a~is~ 187 (799)
.+++. .+.. .|..+. ..|....+.. ..+.+||+.+|+++++....+ ...++++..
T Consensus 91 ~~~~~~~~~~~~~---~~~~~~--------~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s 159 (723)
T 3j09_A 91 AAFAGVLLLFLAH---FISLPY--------EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLAS 159 (723)
T ss_dssp TTTTHHHHHHHTT---SSCSSS--------SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSSCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---Hhccch--------HHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence 33221 1221 111110 0111111111 146788888888887765443 222233222
Q ss_pred Hhhhcc-cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hh--hhcCceeEEEeCCeEEEEecCCCCccc
Q 003740 188 VVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDL----DR--EKKKITVQVARNGFRRKISIYDLLPGD 260 (799)
Q Consensus 188 ~~~~~~-~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l----~~--~~~~~~v~V~R~g~~~~i~~~~LvvGD 260 (799)
++.+.. .+..+.||++.+++++++++ ++|.+.++.++. .+ .+.+..++|+|||++++|++++|+|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GD 233 (723)
T 3j09_A 160 VLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGD 233 (723)
T ss_dssp HHHHHTTTTCCCCCCTTHHHHHHHHHH------HHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTC
T ss_pred HHHHHhhcccchhHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCC
Confidence 222211 11122388887766655443 667666654332 11 245779999999999999999999999
Q ss_pred EEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCC
Q 003740 261 IVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (799)
Q Consensus 261 iv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (799)
+|.|++||+|||||+|++|++ .||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+|++++++++
T Consensus 234 iv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~ 311 (723)
T 3j09_A 234 IVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 311 (723)
T ss_dssp EEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSC
T ss_pred EEEECCCCEEeeEEEEEECCe-EEecccccCCCcceeecCCCe-eccceEEecCcEEEEEEEecCccHHHHHHHHHHHhh
Confidence 999999999999999999986 999999999999999998875 999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHH
Q 003740 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (799)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav 420 (799)
.+++|+|+.+|+++.++.++.+++++++|++|.+. .+. .+...+..++++++++|||+||+++
T Consensus 312 ~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~~----------~~~~~~~~~i~vlvia~P~aL~la~ 374 (723)
T 3j09_A 312 GSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AHA----------PLLFAFTTLIAVLVVACPCAFGLAT 374 (723)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-------TTC----------TTCCSHHHHHHHHHHHSCTTHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCC----------cHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 99999999999999999999998888887664210 000 1223577889999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 003740 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (799)
Q Consensus 421 ~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (799)
|+++..++.++.++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. ..+.+.+
T Consensus 375 p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~~l~~ 438 (723)
T 3j09_A 375 PTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRL 438 (723)
T ss_dssp HHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------HHHHHHH
T ss_pred HHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC----------------HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875321 1123332
Q ss_pred HHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEE--E
Q 003740 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--V 578 (799)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~--~ 578 (799)
. ..... .+.||+++|+++++...+..... ..+|.+ .++.++. .
T Consensus 439 a---a~~e~-------------~s~hP~~~Ai~~~a~~~~~~~~~---------~~~~~~----------~~g~g~~~~~ 483 (723)
T 3j09_A 439 A---AIAER-------------RSEHPIAEAIVKKALEHGIELGE---------PEKVEV----------IAGEGVVADG 483 (723)
T ss_dssp H---HHHHT-------------TCCSHHHHHHHHHHHHTTCCCCS---------CCCCEE----------ETTTEEEETT
T ss_pred H---HHHhc-------------cCCCchhHHHHHHHHhcCCCcCC---------ccceEE----------ecCCceEEEE
Confidence 2 22211 16799999999999887754221 112221 1222221 2
Q ss_pred EEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeeccc
Q 003740 579 HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658 (799)
Q Consensus 579 ~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 658 (799)
+..|+++.+..... +.. +.+.+.++.++.+|+|++++++ |++++|+++++
T Consensus 484 ~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~~~va~----------------~~~~~G~i~i~ 533 (723)
T 3j09_A 484 ILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVS 533 (723)
T ss_dssp EEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTCEEEEEEE----------------TTEEEEEEEEE
T ss_pred EEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcCCeEEEEEE----------------CCEEEEEEeec
Confidence 45587766543221 111 2466777889999999999984 57999999999
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
|++||+++++|+.|+++|++++|+|||+..+|.++|+++||.. ++++++|+||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K 586 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQK 586 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCH
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE---------------------------EEccCCHHHH
Confidence 9999999999999999999999999999999999999999975 9999999999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 739 ~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
..+|+.||++ +.|+|+|||.||+|||++|||||||| +|+|+||++||+ ||..|+++|
T Consensus 587 ~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i 648 (723)
T 3j09_A 587 SEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 648 (723)
T ss_dssp HHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHH
T ss_pred HHHHHHHhcC--CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHH
Confidence 9999999976 88999999999999999999999999 999999999999 899998876
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-80 Score=722.64 Aligned_cols=503 Identities=26% Similarity=0.320 Sum_probs=404.8
Q ss_pred CCccHHHHHHHHHhhHHHHH------HHHHHHHHHHhhhcc-cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 003740 159 PARGFWVYVWEALHDMTLMI------LAVCALVSLVVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKD- 230 (799)
Q Consensus 159 ~~~~f~~~~~~~l~~~~~~i------l~i~a~is~~~~~~~-~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~- 230 (799)
.+.+|++.+|+++++....+ ...+|++..++.+.. .+.++.||++.+++++++++ ++|.+.++.++
T Consensus 47 ~g~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~ 120 (645)
T 3j08_A 47 SGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRT 120 (645)
T ss_dssp HHHHHHHHTCCTTTTCSGGGCCCCSCHHHHHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHH------HHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 46788888888887765443 122222222211111 11222488887766655543 67777666433
Q ss_pred ------HhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCE
Q 003740 231 ------LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304 (799)
Q Consensus 231 ------l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~ 304 (799)
+.+ ..+..++|+|||++++|+++||+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|..++.
T Consensus 121 ~~~l~~l~~-l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~Pv~K~~g~~- 197 (645)
T 3j08_A 121 GEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDE- 197 (645)
T ss_dssp CCCCHHHHH-TSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCE-
T ss_pred HHHHHHHhc-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcE-EEEcccccCCCCceecCCCCE-
Confidence 332 45679999999999999999999999999999999999999999986 999999999999999998875
Q ss_pred EEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Q 003740 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 384 (799)
Q Consensus 305 v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~ 384 (799)
+|+||.+.+|.++++|+++|.+|.+|+|++++++++.+++|+|+.+|+++.++.++.+++++++|++|.+. .+
T Consensus 198 v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~ 270 (645)
T 3j08_A 198 VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AH 270 (645)
T ss_dssp ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-------CS
T ss_pred eeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cC
Confidence 99999999999999999999999999999999999999999999999999999999999888887764210 01
Q ss_pred CccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccC
Q 003740 385 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTN 464 (799)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n 464 (799)
. .+...+..++++++++|||+||+++|+++..++.++.++|++||+++++|+||++|+||||||||||+|
T Consensus 271 ~----------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~ 340 (645)
T 3j08_A 271 A----------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKG 340 (645)
T ss_dssp C----------SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSS
T ss_pred C----------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCC
Confidence 0 012345678999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChH
Q 003740 465 HMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQ 544 (799)
Q Consensus 465 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~ 544 (799)
+|+|.+++..+.. ..+.+.+. ..... .+.||+++|+++++...+....
T Consensus 341 ~~~v~~~~~~~~~----------------~~~~l~~a---a~~e~-------------~s~hPla~Aiv~~a~~~g~~~~ 388 (645)
T 3j08_A 341 KPEVTDLVPLNGD----------------ERELLRLA---AIAER-------------RSEHPIAEAIVKKALEHGIELG 388 (645)
T ss_dssp CCEEEEEEESSSC----------------HHHHHHHH---HHHHT-------------TCCSHHHHHHHHHHHHTTCCCC
T ss_pred CeEEEEEEeCCCC----------------HHHHHHHH---HHHhh-------------cCCChhHHHHHHHHHhcCCCcC
Confidence 9999999875321 11333322 22211 1679999999999988775422
Q ss_pred HHhhhcceEEEecCCCCCceEEEEEEeCCCcEE--EEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHh
Q 003740 545 AERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASE 622 (799)
Q Consensus 545 ~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~--~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~ 622 (799)
. ..+|.+ .++.+.. .+..|+++.+..... +.. +.+.+..+.++.+
T Consensus 389 ~---------~~~~~~----------~~g~g~~~~~v~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~ 435 (645)
T 3j08_A 389 E---------PEKVEV----------IAGEGVVADGILVGNKRLMEDFGV----------AVS----NEVELALEKLERE 435 (645)
T ss_dssp S---------CCCCEE----------ETTTEEEETTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTT
T ss_pred C---------ccceEE----------ecCCceEEEEEEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhc
Confidence 1 112221 1222221 244577766543221 111 2456677889999
Q ss_pred ccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC
Q 003740 623 ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD 702 (799)
Q Consensus 623 g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~ 702 (799)
|+|++++++ +++++|+++++|++||+++++|+.|+++|++++|+|||+..+|.++|+++||..
T Consensus 436 g~~~l~va~----------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~- 498 (645)
T 3j08_A 436 AKTAVIVAR----------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL- 498 (645)
T ss_dssp TCCCEEEEE----------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-
T ss_pred CCeEEEEEE----------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-
Confidence 999999984 578999999999999999999999999999999999999999999999999975
Q ss_pred CceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHH
Q 003740 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 703 ~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtev 782 (799)
++++++|+||..+|+.||++ +.|+|+|||.||+|||++|||||||| +|+|+
T Consensus 499 --------------------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~ 549 (645)
T 3j08_A 499 --------------------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDV 549 (645)
T ss_dssp --------------------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCC
T ss_pred --------------------------EEEeCCHHhHHHHHHHHhhC--CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHH
Confidence 99999999999999999976 88999999999999999999999999 99999
Q ss_pred HHHhcCC-----ChHhHHHhh
Q 003740 783 ELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 783 ak~aaDi-----nf~si~~~i 798 (799)
+|++||+ ||..++++|
T Consensus 550 a~~~AD~vl~~~~~~~i~~~i 570 (645)
T 3j08_A 550 AVESGDIVLIRDDLRDVVAAI 570 (645)
T ss_dssp SSCCSSSEESSCCTTHHHHHH
T ss_pred HHHhCCEEEecCCHHHHHHHH
Confidence 9999999 899988876
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.1e-31 Score=275.97 Aligned_cols=242 Identities=23% Similarity=0.341 Sum_probs=182.4
Q ss_pred HHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHH
Q 003740 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (799)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 505 (799)
.++++++++|+|+|+++++|.|+++++||||||||||+|+|.|.+++ +. ++.+.++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~---- 59 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYA---- 59 (263)
Confidence 46789999999999999999999999999999999999999998764 00 1222222
Q ss_pred HhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchH
Q 003740 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585 (799)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e 585 (799)
+.++ ..+.||..+|+.+++...|..... ...| ....+.++...++|...
T Consensus 60 -----~~~e-------~~s~hp~a~ai~~~~~~~g~~~~~---------~~~~----------~~~~G~g~~~~~~~~~~ 108 (263)
T 2yj3_A 60 -----ASVE-------ALSSHPIAKAIVKYAKEQGVKILE---------VKDF----------KEISGIGVRGKISDKII 108 (263)
Confidence 1222 227899999999887665543111 0001 11122333222222110
Q ss_pred HHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccH
Q 003740 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV 665 (799)
Q Consensus 586 ~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v 665 (799)
.+... .++.+ +.++ .+..+.|.+.+.|+++|++
T Consensus 109 -----------------~~G~~-------------~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 109 -----------------EVKKA-------------ENNND-IAVY----------------INGEPIASFNISDVPRPNL 141 (263)
Confidence 00000 01222 2222 3456789999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHH
Q 003740 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 745 (799)
Q Consensus 666 ~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~L 745 (799)
+++++.|++.|+++.|+|||+..++..+++++||.. +|+...|++|...++.|
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Confidence 999999999999999999999999999999999964 78888899999999999
Q ss_pred HHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 746 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 746 q~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+.. ++.|+|+|||.||++|+++|++|++|| ++++.+++.||+ ++..+.++|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 988 889999999999999999999999999 899999999998 677666554
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-26 Score=207.99 Aligned_cols=108 Identities=27% Similarity=0.390 Sum_probs=99.5
Q ss_pred HHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEcc
Q 003740 229 KDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 308 (799)
Q Consensus 229 ~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sG 308 (799)
.+|.+ +.+..++|+|||++++|++.+|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+|
T Consensus 4 ~~L~~-l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~-~v~aG 80 (113)
T 2hc8_A 4 KKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGA 80 (113)
T ss_dssp HHHHH-HSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTT
T ss_pred HHHhc-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCC-EEEeC
Confidence 34443 4567999999999999999999999999999999999999999998 599999999999999999877 59999
Q ss_pred ceeeeceEEEEEEEEcccchhHHHHHhhcCC
Q 003740 309 TKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (799)
Q Consensus 309 t~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (799)
|.|.+|.++++|+++|.+|++|+|++++.++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999988654
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-26 Score=206.85 Aligned_cols=114 Identities=25% Similarity=0.382 Sum_probs=101.3
Q ss_pred HHHHHHHHHhhhhcCceeEEEeCCe------EEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCcc
Q 003740 223 KQSLQFKDLDREKKKITVQVARNGF------RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296 (799)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~R~g~------~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv 296 (799)
+.++...+|.+ +.+..++|+|+|+ ++.|++.+|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+
T Consensus 4 ka~~~l~~L~~-l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~pv 81 (124)
T 2kij_A 4 TMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPV 81 (124)
T ss_dssp --CCHHHHHHH-TCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSCE
T ss_pred HHHHHHHHHhc-cCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCccE
Confidence 33445566654 4567999999764 6889999999999999999999999999999997 99999999999999
Q ss_pred ccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCC
Q 003740 297 NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (799)
Q Consensus 297 ~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (799)
.|..++ .+|+||.|.+|.+.++|+++|.+|.+|+|++++.++
T Consensus 82 ~k~~g~-~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 82 AKKPGS-TVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp ECCTTE-EECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EeCCCC-EEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 999876 599999999999999999999999999999998765
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=224.41 Aligned_cols=262 Identities=29% Similarity=0.379 Sum_probs=192.9
Q ss_pred HHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHH
Q 003740 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (799)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 505 (799)
.+.++++++|+++|+++++|+|+++++||||||||||.+.+.+.+++..+. . .++.+.+. .
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------------~~~~l~~~---~ 68 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------------ERELLRLA---A 68 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------------HHHHHHHH---H
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C--------------HHHHHHHH---H
Confidence 356889999999999999999999999999999999999999998876532 0 12333322 1
Q ss_pred HhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEE--EEEcCc
Q 003740 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGA 583 (799)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~--~~~KGa 583 (799)
... . .+.||++.|+.+++...|...... ..+. ...+.++. .+.+|.
T Consensus 69 ~~e------~-------~s~hp~~~a~~~~~~~~g~~~~~~----~~~~---------------~~~G~~~~~~~~~~g~ 116 (287)
T 3a1c_A 69 IAE------R-------RSEHPIAEAIVKKALEHGIELGEP----EKVE---------------VIAGEGVVADGILVGN 116 (287)
T ss_dssp HHT------T-------TCCSHHHHHHHHHHHHTTCCCCCC----SCEE---------------EETTTEEEETTEEEEC
T ss_pred HHh------h-------cCCCHHHHHHHHHHHhcCCCcccc----ccce---------------eecCCCeEEEEEEECC
Confidence 111 1 278999999999998877642100 0000 11222221 123455
Q ss_pred hHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcc
Q 003740 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (799)
Q Consensus 584 ~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~ 663 (799)
++.+-.. +. ++. ..+.+..+.+..+|.+++++++ +..+++.+...++++|
T Consensus 117 ~~~~~~~--------~~--~~~----~~~~~~~~~~~~~g~~~i~~~~----------------d~~~~~~~~~~~~~~~ 166 (287)
T 3a1c_A 117 KRLMEDF--------GV--AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKE 166 (287)
T ss_dssp HHHHHHT--------TC--CCC----HHHHHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCT
T ss_pred HHHHHhc--------CC--Ccc----HHHHHHHHHHHhCCCeEEEEEE----------------CCEEEEEEEeccccch
Confidence 4433221 11 111 1244556778888999998874 4578899999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHH
Q 003740 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 743 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~ 743 (799)
++.++++.|+++|+++.++||++...+..+++.+||.. +|....|..|...++
T Consensus 167 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~ 219 (287)
T 3a1c_A 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVK 219 (287)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHH
T ss_pred hHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce---------------------------eeeecChHHHHHHHH
Confidence 99999999999999999999999999999999999964 777888999999999
Q ss_pred HHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 744 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 744 ~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.|+.. +.++|+||+.||.+|++.|++++++| ++.+..++.||+ ++..+.+.|
T Consensus 220 ~l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 220 KLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp HHTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHH
T ss_pred HHhcC--CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 88765 77899999999999999999999999 787777777887 677776654
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-24 Score=229.13 Aligned_cols=143 Identities=14% Similarity=0.123 Sum_probs=114.7
Q ss_pred eecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc--CCceEEE
Q 003740 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMA 731 (799)
Q Consensus 654 ~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~v~a 731 (799)
+-...+++||+++++++.|+++|++|+|+|||+..+++++|+++|+..++..++.... .++++++...+ +.+.+++
T Consensus 135 v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l--~~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 135 VADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFM--DFDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp HHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECE--EECTTSBEEEECSSCCCTTC
T ss_pred HHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeE--EEcccceeEeccccccchhh
Confidence 3345789999999999999999999999999999999999999999765433322111 11222222111 2344678
Q ss_pred ecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHh---hhcCCeeeecCC------CCCHHHHHhcCC-----ChHhHHHh
Q 003740 732 RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA---LHEADIGLAMGI------AGTEVELECCCF-----NFSSRKTY 797 (799)
Q Consensus 732 r~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapA---L~~AdVGiamgi------~gtevak~aaDi-----nf~si~~~ 797 (799)
+..|.+|...+..+++. |+.|+|+|||+||+|| |+.||||||||. +|+|++++++|| ||.+|+++
T Consensus 213 k~~~~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp HHHHHHTCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred cccHHHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 88899999999999988 9999999999999999 559999999996 677788999999 99999998
Q ss_pred hC
Q 003740 798 IL 799 (799)
Q Consensus 798 i~ 799 (799)
|+
T Consensus 292 il 293 (297)
T 4fe3_A 292 IL 293 (297)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=204.27 Aligned_cols=252 Identities=27% Similarity=0.333 Sum_probs=180.6
Q ss_pred hcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecC
Q 003740 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (799)
Q Consensus 438 vr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 517 (799)
+|+++++|+|++++.||||++||||.|+|+|.+++..+.. ....+.++ .++..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~----------------~~~~~~~~-~~~~~---------- 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS----------------EDELLQIA-ASLEA---------- 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC----------------HHHHHHHH-HHHHT----------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC----------------HHHHHHHH-HHhhc----------
Confidence 5889999999999999999999999999999998765431 12333332 11111
Q ss_pred CCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccccccc
Q 003740 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNS 597 (799)
Q Consensus 518 ~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~ 597 (799)
.+.+|...++.+++...|..... ...+...+- .+......+. . +..|.++.+...+..
T Consensus 54 -----~s~~~~~~a~~~~~~~~g~~~~~----~~~~~~~~g------~~~~~~~~~~--~-~~~~~~~~~~~~~~~---- 111 (280)
T 3skx_A 54 -----RSEHPIAAAIVEEAEKRGFGLTE----VEEFRAIPG------KGVEGIVNGR--R-YMVVSPGYIRELGIK---- 111 (280)
T ss_dssp -----TCCSHHHHHHHHHHHHTTCCCCC----CEEEEEETT------TEEEEEETTE--E-EEEECHHHHHHTTCC----
T ss_pred -----cCCCHHHHHHHHHHHhcCCCCCC----ccceeecCC------CEEEEEECCE--E-EEEecHHHHHHcCCC----
Confidence 15688999999988877654211 011111110 0111111111 1 123555544332211
Q ss_pred CCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCC
Q 003740 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGI 677 (799)
Q Consensus 598 ~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI 677 (799)
.. .....+...+.+.+.++ .+..++|.+.+.++++|++.++++.|++.|+
T Consensus 112 ------~~--------~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 112 ------TD--------ESVEKLKQQGKTVVFIL----------------KNGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp ------CC--------TTHHHHHTTTCEEEEEE----------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred ------ch--------HHHHHHHhCCCeEEEEE----------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 01 12234556677776665 3457889999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEc
Q 003740 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (799)
Q Consensus 678 ~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~G 757 (799)
++.++||++...+..+++.+|+.. .|....|.+|...++.+.+. . .++|+|
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~~~~k~~~~k~~~~~-~-~~~~vG 212 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLDD---------------------------YFAEVLPHEKAEKVKEVQQK-Y-VTAMVG 212 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCGGGHHHHHHHHHTT-S-CEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHcCChh---------------------------HhHhcCHHHHHHHHHHHHhc-C-CEEEEe
Confidence 999999999999999999999965 78889999999999999987 4 469999
Q ss_pred CCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 758 DGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 758 DG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|+.||.+|++.|++|++|| ++++..+++||. |+..+.+.|
T Consensus 213 D~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 213 DGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp CTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHH
T ss_pred CCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHH
Confidence 9999999999999999999 899999999998 777777654
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-20 Score=179.19 Aligned_cols=134 Identities=21% Similarity=0.302 Sum_probs=115.1
Q ss_pred cCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEee
Q 003740 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 603 (799)
Q Consensus 524 ~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 603 (799)
.+||+|.||++++...+ ....+..++++..+||+|.||+|+++++.+++++.+++|||||.|++.|+.+. .+|...|
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~ 108 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVP 108 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEE-ETTEEEE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHh-cCCCccc
Confidence 57999999999875432 34567789999999999999999999987777788999999999999999875 5888999
Q ss_pred CCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCC
Q 003740 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (799)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~ 660 (799)
++++.++.+.+.++.|+++|+|||++|||+++..........|.+|+|+|++||-|.
T Consensus 109 l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 109 LDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999999999999999999999999999976532222346899999999999885
|
| >4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.9e-14 Score=106.28 Aligned_cols=56 Identities=41% Similarity=0.615 Sum_probs=50.9
Q ss_pred CcHHHHHHHHHhhhcccccccccccccccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhc
Q 003740 17 TSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIH 77 (799)
Q Consensus 17 ~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~ 77 (799)
+|.|+|+|||+|+ +|+||+|||||++||+|++|++..++ ++|+...+.+|+.+|.+
T Consensus 1 ~s~e~L~rWR~a~-lVlNa~RRFR~t~dL~K~~e~~~~~r----kiR~~~~v~rAa~~F~~ 56 (57)
T 4aqr_D 1 SSIERLQQWRKAA-LVLNASRRFRYTLDLKKEQETREMRQ----KIRSHAHALLAANRFMD 56 (57)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH-HHhchHhhhhhhcchhhHHHHHHHHH----HHHHHHHHHHHHHHhhc
Confidence 4789999999998 99999999999999999998777654 89999999999999964
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.6e-11 Score=115.62 Aligned_cols=105 Identities=18% Similarity=0.242 Sum_probs=88.8
Q ss_pred CCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH--HcCCccCCceeecchhhhccCHHHHhhh
Q 003740 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR--ECGILTDNGIAIEGPEFREKSDEELSKL 723 (799)
Q Consensus 646 ~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~--~~GI~~~~~~~~~g~~~~~~~~~~~~~~ 723 (799)
..+...++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+||.
T Consensus 28 ~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~----------------------- 76 (168)
T 3ewi_A 28 SGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK----------------------- 76 (168)
T ss_dssp CSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----------------------
T ss_pred cCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----------------------
Confidence 344567788888777 3899999999999999999 67888888 66763
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 724 ~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++. .+.+|...++.+.+++| +.++|+||+.||.||++.|+++++|+ ++.+.+|+.||+
T Consensus 77 -----~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~ 137 (168)
T 3ewi_A 77 -----TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGY 137 (168)
T ss_dssp -----EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSE
T ss_pred -----EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCE
Confidence 232 35689999998887755 57999999999999999999999999 999999999998
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-11 Score=120.25 Aligned_cols=92 Identities=18% Similarity=0.273 Sum_probs=81.9
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003740 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (799)
Q Consensus 668 aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~ 747 (799)
+|+.|+++|+++.++||++...+..+++++||.. +|... ..|...++.+.+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------~~~~~--k~k~~~~~~~~~ 110 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------IYQGQ--DDKVQAYYDICQ 110 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------EECSC--SSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------EeeCC--CCcHHHHHHHHH
Confidence 4999999999999999999999999999999964 45443 678888887776
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 748 ~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++| +.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+
T Consensus 111 ~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~ 154 (195)
T 3n07_A 111 KLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANY 154 (195)
T ss_dssp HHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSE
T ss_pred HhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCE
Confidence 645 57999999999999999999999999 999999999998
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-10 Score=115.21 Aligned_cols=92 Identities=22% Similarity=0.341 Sum_probs=83.3
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003740 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (799)
Q Consensus 668 aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~ 747 (799)
+++.|+++|+++.++||++...+..+++++||.. +|... .+|...++.+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------~f~~~--~~K~~~~~~~~~ 104 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------LFQGR--EDKLVVLDKLLA 104 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------HhcCc--CChHHHHHHHHH
Confidence 9999999999999999999999999999999964 45433 788888888877
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 748 ~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++| +.++|+||+.||.+|++.|+++++|+ ++++.+++.||+
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~ 148 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHG 148 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSE
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCE
Confidence 655 67999999999999999999999999 899999999998
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=116.76 Aligned_cols=92 Identities=23% Similarity=0.288 Sum_probs=83.5
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003740 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (799)
Q Consensus 668 aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~ 747 (799)
+++.|+++|+++.++||++...+..+++++||.. +|... .+|...++.+.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~---------------------------~f~~~--k~K~~~l~~~~~ 134 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH---------------------------LYQGQ--SDKLVAYHELLA 134 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECSC--SSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch---------------------------hhccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999964 55554 778898888877
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 748 ~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++| +.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+
T Consensus 135 ~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~ 178 (211)
T 3ij5_A 135 TLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHY 178 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSE
T ss_pred HcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCE
Confidence 644 67999999999999999999999999 899999999998
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.06 E-value=4.2e-10 Score=109.92 Aligned_cols=91 Identities=22% Similarity=0.252 Sum_probs=81.8
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003740 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (799)
Q Consensus 668 aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~ 747 (799)
+++.|+++|+++.++||++...+..+++++||. ++... ..|...++.+.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------~~~~~--~~k~~~l~~~~~ 96 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------VLHGI--DRKDLALKQWCE 96 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC----------------------------EEESC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe----------------------------eEeCC--CChHHHHHHHHH
Confidence 899999999999999999999999999999984 33333 778888888877
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 748 ~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++| +.+.|+||+.||.+|++.|+++++|+ ++++.+++.||+
T Consensus 97 ~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~ 140 (176)
T 3mmz_A 97 EQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARA 140 (176)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSE
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCE
Confidence 645 67899999999999999999999999 899999999998
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.6e-09 Score=110.39 Aligned_cols=131 Identities=21% Similarity=0.210 Sum_probs=97.0
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--cchhh-hc---------------
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGPEF-RE--------------- 714 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~--~g~~~-~~--------------- 714 (799)
...+.|++.++|++|++.|+++.++||++...+..+++++|+..+ ++ .+. +|+.+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999998532 11 122 23322 00
Q ss_pred ----------------------cCHHHHhhhcC--CceEE-----EecCc--ccHHHHHHHHHHhCC---CEEEEEcCCc
Q 003740 715 ----------------------KSDEELSKLIP--KIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGT 760 (799)
Q Consensus 715 ----------------------~~~~~~~~~~~--~~~v~-----ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~ 760 (799)
.+++++.+... .+.+. -...| .+|...++.+.+.+| +.|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 01111111111 23332 12235 799999999987755 4689999999
Q ss_pred cCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 761 NDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 761 NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
||.+|++.|++|++|| ++.+..|+.||.
T Consensus 180 nD~~m~~~ag~~va~~-n~~~~~k~~a~~ 207 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATDNIKAVSDF 207 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSE
T ss_pred HhHHHHHHcCceEEec-CchHHHHHhCCE
Confidence 9999999999999999 999999999998
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=7.6e-10 Score=108.45 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=86.5
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+.++..++|+.|+++|+++.++||++...+..+++++|+.. +|.. ...|..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~---------------------------~~~~--~k~k~~ 86 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFLG--KLEKET 86 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEES--CSCHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------eecC--CCCcHH
Confidence 45677899999999999999999999999999999999964 4433 356888
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 741 lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.++.+.+++| +.|+|+||+.||.+|++.|+++++|+ ++.+..++.||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~ 137 (180)
T 1k1e_A 87 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDH 137 (180)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSE
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCE
Confidence 8887765546 67999999999999999999999999 899999999998
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.6e-10 Score=121.51 Aligned_cols=123 Identities=16% Similarity=0.172 Sum_probs=93.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe-----c
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----S 733 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar-----~ 733 (799)
-+++|++.+.++.|+++|+++.|+||+....+..+++++|+.......++-.+ -.+.++ .
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d---------------~~~tg~~~~~~~ 241 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVS---------------GKLTGQVLGEVV 241 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET---------------TEEEEEEESCCC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeC---------------Ceeeeeeccccc
Confidence 47899999999999999999999999999999999999999631110000000 001111 1
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.+..|...++.+.+++| +.+.|+|||.||.+|++.|++|++| ++.+..++.||. |+..|+..+
T Consensus 242 ~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L 312 (335)
T 3n28_A 242 SAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCIL 312 (335)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHH
T ss_pred ChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHH
Confidence 12456666666655434 6799999999999999999999999 899999999998 888887765
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.1e-09 Score=108.56 Aligned_cols=92 Identities=24% Similarity=0.374 Sum_probs=76.9
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003740 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (799)
Q Consensus 668 aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~ 747 (799)
+++.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------~~~~~--kpk~~~~~~~~~ 104 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------YYKGQ--VDKRSAYQHLKK 104 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE---------------------------EECSC--SSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc---------------------------ceeCC--CChHHHHHHHHH
Confidence 4999999999999999999999999999999964 44443 234444444443
Q ss_pred hC---CCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 748 TL---GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 748 ~~---G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++ .+.++|+||+.||.+|++.|+++++|+ ++.+..++.||+
T Consensus 105 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~ 148 (191)
T 3n1u_A 105 TLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADW 148 (191)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSE
T ss_pred HhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCE
Confidence 32 357999999999999999999999999 999999999998
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.6e-09 Score=101.66 Aligned_cols=101 Identities=22% Similarity=0.254 Sum_probs=86.3
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003740 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (799)
Q Consensus 668 aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~ 747 (799)
+++.|+++|+++.++||++...+..+++++|+.. ++... ..|...++.+.+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~~~~~--kpk~~~~~~~~~ 89 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------LFQGV--VDKLSAAEELCN 89 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE---------------------------eeccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999964 44333 567777777666
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----C----hHhHHHhh
Q 003740 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----N----FSSRKTYI 798 (799)
Q Consensus 748 ~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----n----f~si~~~i 798 (799)
++| +.++|+||+.||.++++.|+++++++ ++.+..++.||+ + +..+++.+
T Consensus 90 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~~l 151 (164)
T 3e8m_A 90 ELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVEKV 151 (164)
T ss_dssp HHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHHHH
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHHHH
Confidence 545 57999999999999999999999999 999999999999 3 66666655
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.7e-08 Score=106.46 Aligned_cols=122 Identities=19% Similarity=0.253 Sum_probs=91.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe-----cC
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----SS 734 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar-----~s 734 (799)
+++||+.+.++.|++.|+++.++||.....+..+++.+|+...-..++...+- ..-++ ..
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg---------------~~tg~i~~~~~~ 243 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN---------------VLTDNITLPIMN 243 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------EEEEEECSSCCC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------eeeeeEecccCC
Confidence 48899999999999999999999999999999999999996411111100000 00111 12
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+..|..+++.+.+++| +.+.|+||+.||.+|++.|++|+++ ++.+..++.||. ++..+...|
T Consensus 244 ~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~--~~~~~~~~~a~~~i~~~~L~~ll~~L 313 (317)
T 4eze_A 244 AANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW--KAKPVVREKIHHQINYHGFELLLFLI 313 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCCEEESSSCGGGGGGGT
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHHhcCeeeCCCCHHHHHHHH
Confidence 3567777776655535 5799999999999999999999999 467778888887 777777665
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.69 E-value=3e-08 Score=110.57 Aligned_cols=122 Identities=19% Similarity=0.238 Sum_probs=94.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEec-----C
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS-----S 734 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~-----s 734 (799)
+++||+.+.++.|++.|+++.++||.....+..+++.+|+.......++-.+ -.+.++. .
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d---------------g~~tg~~~~~v~~ 320 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVD---------------GTLTGRVVGPIID 320 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEET---------------TEEEEEECSSCCC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeC---------------CEEEeeEccCCCC
Confidence 7899999999999999999999999999999999999999531100000000 0011121 2
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+..|..+++.+.+++| +.+.|+|||.||.+|++.|++|+++ ++.+..++.||. ++..+...+
T Consensus 321 ~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l 390 (415)
T 3p96_A 321 RAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLL 390 (415)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHT
T ss_pred CcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHh
Confidence 5678888887776645 5789999999999999999999999 678889999998 777776654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=3.7e-08 Score=98.57 Aligned_cols=123 Identities=18% Similarity=0.135 Sum_probs=93.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe-----c
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----S 733 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar-----~ 733 (799)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++...+ -.+-++ .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~---------------~~~~~~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEN---------------DALNGLVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET---------------TEEEEEEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeC---------------CEEEeeeccCCC
Confidence 45889999999999999999999999999999999999998642111111110 001111 1
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.+..|...++.+.+++| +.+.|+||+.||.+|++.|+++++| ++.+..++.||. |++.+..++
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHh
Confidence 24667787777766545 5689999999999999999999999 778889999998 787776544
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=9.5e-08 Score=90.46 Aligned_cols=143 Identities=15% Similarity=0.251 Sum_probs=87.9
Q ss_pred CCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHH
Q 003740 457 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 536 (799)
Q Consensus 457 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~ 536 (799)
..||+|.|+++|+++...+... .++++++ +.+.. . .+.||..+||++++
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~---------------e~elL~l---AAs~E------~-------~SeHPla~AIv~~A 61 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVD---------------EKTLADA---AQLAS------L-------ADETPEGRSIVILA 61 (156)
T ss_dssp --------CEEEEEEEECTTSC---------------HHHHHHH---HHHTT------S-------SCCSHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCCCC---------------HHHHHHH---HHHHh------C-------cCCCHHHHHHHHHH
Confidence 4799999999999987643220 0133332 22221 1 27899999999999
Q ss_pred HHc-CCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHH
Q 003740 537 LLL-GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615 (799)
Q Consensus 537 ~~~-g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 615 (799)
... +........ ......+|++..++.++.+ .+ +-+.+|+++.|...+.. .|. .+.+ .+.+.
T Consensus 62 ~~~~~l~~~~~~~--~~~~~~~F~a~~G~~Gv~v--~G---~~v~vGn~~~i~~l~~~----~gi--~~~~----~~~~~ 124 (156)
T 1svj_A 62 KQRFNLRERDVQS--LHATFVPFTAQSRMSGINI--DN---RMIRKGSVDAIRRHVEA----NGG--HFPT----DVDQK 124 (156)
T ss_dssp HHHTTCCCCCHHH--HTCEEEEEETTTTEEEEEE--TT---EEEEEEEHHHHHHHHHH----HTC--CCCH----HHHHH
T ss_pred HHhcCCCcccccc--cccceeeccccCCCCeEEE--CC---EEEEEeCcHHHHHHHHH----cCC--CCcH----HHHHH
Confidence 876 654321100 0134578999888788743 33 34667998877665542 121 1221 25667
Q ss_pred HHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcc
Q 003740 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (799)
Q Consensus 616 ~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~ 663 (799)
++.++.+|.+++++| .|..++|++++.|++||
T Consensus 125 ~~~la~~G~T~v~VA----------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 125 VDQVARQGATPLVVV----------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHTTCEEEEEE----------------ETTEEEEEEEEEECCCC
T ss_pred HHHHHhCCCCEEEEE----------------ECCEEEEEEEEecCCCC
Confidence 788999999999998 45789999999999997
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=6.5e-08 Score=96.02 Aligned_cols=126 Identities=17% Similarity=0.210 Sum_probs=88.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe-cCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar-~sP~dK 738 (799)
++.|+++++++.|++.|+++.++||+....+..+.+.+|+.......+...+ ..+ .-.+... ..+..|
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~K 144 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD----------GKL-TGDVEGEVLKENAK 144 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET----------TEE-EEEEECSSCSTTHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEEC----------CEE-cCCcccCccCCccH
Confidence 5678999999999999999999999999988889999998421000000000 000 0000000 224578
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC---C--hHhHHHhh
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF---N--FSSRKTYI 798 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi---n--f~si~~~i 798 (799)
...++.+.+++| +.+.++||+.||.+|++.|+++++|+ +.+..++.||. + +..+.+.+
T Consensus 145 ~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~~l 210 (211)
T 1l7m_A 145 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKYI 210 (211)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHHhh
Confidence 777776665545 45999999999999999999999997 55667888887 4 88877654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=3.7e-08 Score=97.06 Aligned_cols=93 Identities=18% Similarity=0.257 Sum_probs=79.9
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
.+++.|+++|+++.++||++...+..+++++|+.. +|.. ...|...++.+.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------~~~~--~kpk~~~~~~~~ 110 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------LYQG--QSNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECS--CSCSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------eecC--CCCCHHHHHHHH
Confidence 48999999999999999999999999999999964 4433 355677777776
Q ss_pred HhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 747 ~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+++| +.++|+||+.||.++++.|+++++++ ++.+..++.||+
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~ 155 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADY 155 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSE
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCE
Confidence 5546 67999999999999999999999999 788888888998
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.62 E-value=2.4e-07 Score=96.99 Aligned_cols=130 Identities=25% Similarity=0.330 Sum_probs=92.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-------Cc-eee---cchhh----------h----
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-------NG-IAI---EGPEF----------R---- 713 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~-------~~-~~~---~g~~~----------~---- 713 (799)
..+-+...++++++++.|+.+.++||.....+..+.+++|+... ++ .+. .++.+ .
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 35678999999999999999999999999999999999997310 11 011 00000 0
Q ss_pred ------------------------------------------c---------------cCHH-------HHhhhc-CCce
Q 003740 714 ------------------------------------------E---------------KSDE-------ELSKLI-PKIQ 728 (799)
Q Consensus 714 ------------------------------------------~---------------~~~~-------~~~~~~-~~~~ 728 (799)
. -+++ .+.+.+ +.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKIN 180 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCE
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEE
Confidence 0 0111 111112 2232
Q ss_pred EE-E-----ecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 729 VM-A-----RSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 729 v~-a-----r~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++ + ...| ..|...++.+.+.+| +-|+++||+.||.+|++.|++|+||| ++.+..|++||.
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~ 251 (279)
T 4dw8_A 181 VFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADY 251 (279)
T ss_dssp EEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSE
T ss_pred EEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCE
Confidence 22 1 2334 388888888877755 46999999999999999999999999 999999999998
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.60 E-value=2.4e-08 Score=98.39 Aligned_cols=115 Identities=23% Similarity=0.281 Sum_probs=88.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+......+..... ...-....|..|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~k~ 142 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDG---------------KFQGIRLRFRDKG 142 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETT---------------EEEEEECCSSCHH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCC---------------ceECCcCCccCHH
Confidence 7899999999999999999999999999888888 88998532001100000 0001345678899
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi---nf~si~~~i 798 (799)
..++.+ . .+.+.|+||+.||.+|++.|+++++|+ ++.+ .||. ++..+.+.|
T Consensus 143 ~~l~~l--~-~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 143 EFLKRF--R-DGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVKDLKELVDFI 196 (201)
T ss_dssp HHHGGG--T-TSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEESSHHHHHHHH
T ss_pred HHHHhc--C-cCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEccHHHHHHHH
Confidence 999998 4 567889999999999999999999999 7776 7787 676666544
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.58 E-value=1.4e-07 Score=98.79 Aligned_cols=53 Identities=28% Similarity=0.349 Sum_probs=43.4
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+|..-++.+.+.+| +-|+++||+.||.+|++.|++|+||| +|.+..|++||.
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~ 251 (279)
T 3mpo_A 196 ASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQA 251 (279)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSC
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcce
Confidence 459999998887766 56999999999999999999999999 999999999998
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.55 E-value=3.5e-07 Score=96.32 Aligned_cols=53 Identities=23% Similarity=0.335 Sum_probs=48.3
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..|..-++.+.+.+| +-|+++||+.||.+|++.|++|+||| ++.+..|++||.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~ 256 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADW 256 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSE
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCE
Confidence 568888888887756 46899999999999999999999999 999999999998
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.55 E-value=3e-07 Score=96.78 Aligned_cols=129 Identities=22% Similarity=0.285 Sum_probs=91.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--cchhh-------------------
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGPEF------------------- 712 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~--~g~~~------------------- 712 (799)
..+-+.+.++++++++.|++++++||.....+..+.+++|+... ++ .+. .|+.+
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 45778999999999999999999999999999999999998521 11 000 00000
Q ss_pred ---------------------------------------hc-------------cCHHH-------HhhhcC-CceEE--
Q 003740 713 ---------------------------------------RE-------------KSDEE-------LSKLIP-KIQVM-- 730 (799)
Q Consensus 713 ---------------------------------------~~-------------~~~~~-------~~~~~~-~~~v~-- 730 (799)
.. .+++. +.+.+. .+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 00 01111 111111 12111
Q ss_pred ----EecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC
Q 003740 731 ----ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 731 ----ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD 788 (799)
....| ..|..-++.|.+.+| +-|+++||+.||.+|++.|++|+||| +|.+..|++||
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~ 262 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHP 262 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCT
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCC
Confidence 12223 568888988887766 46999999999999999999999999 99999999998
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.54 E-value=4.4e-07 Score=90.14 Aligned_cols=121 Identities=21% Similarity=0.152 Sum_probs=92.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEE--ecCcc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMA--RSSPM 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~a--r~sP~ 736 (799)
++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+...- ..+..+.+.. ... .-.|.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---------------~~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC---------------EEEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCce---------------EEeeecCCCc
Confidence 5689999999999999 999999999999999999999986421 1122222110 111 25788
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC----ChHhHHHhh
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF----NFSSRKTYI 798 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi----nf~si~~~i 798 (799)
.|...++.+... .+.+.|+||+.||.+|++.|+++++++ ...+..+.+.++ |+..+.+.|
T Consensus 133 ~~~~~l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 133 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHH
T ss_pred hHHHHHHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhccccchHHHHHHH
Confidence 999999999887 889999999999999999999999986 544544445554 777776554
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.5e-07 Score=92.61 Aligned_cols=109 Identities=19% Similarity=0.136 Sum_probs=81.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeecchhhhccCHHHHhhhcCCceEEEe-----
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMAR----- 732 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar----- 732 (799)
+++||+.+.++.|++.|+++.++||.....+..+++.+|+..--. ...... ...++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------------~~~g~~~~~~ 154 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDG-----------------RYTGRIEGTP 154 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETT-----------------EEEEEEESSC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECC-----------------EEeeeecCCC
Confidence 479999999999999999999999999999999999999852100 000000 01111
Q ss_pred cCcccHHHHHHHHHHhCC------CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHh
Q 003740 733 SSPMDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELEC 786 (799)
Q Consensus 733 ~sP~dK~~lV~~Lq~~~G------~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~a 786 (799)
..+..|...++.+.++.| +.+.|+||+.||.+|++.|++++++. ...++.+.+
T Consensus 155 ~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~-~~~~l~~~a 213 (232)
T 3fvv_A 155 SFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN-PSPGLREIA 213 (232)
T ss_dssp SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES-CCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC-cCHHHHHHH
Confidence 224678888877665546 57999999999999999999999996 555554433
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.53 E-value=4e-07 Score=94.20 Aligned_cols=129 Identities=23% Similarity=0.305 Sum_probs=88.5
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc---CCc-------------------------------
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT---DNG------------------------------- 704 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~---~~~------------------------------- 704 (799)
..+.+...++++++++.|+++.+.||.....+..+.+++|+.. .++
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 98 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNG 98 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCC
Confidence 3577889999999999999999999999999999999988631 111
Q ss_pred ---eeecchhhhc---------------------c-----------------CHH---HHhhhcCCceEEEecCc-----
Q 003740 705 ---IAIEGPEFRE---------------------K-----------------SDE---ELSKLIPKIQVMARSSP----- 735 (799)
Q Consensus 705 ---~~~~g~~~~~---------------------~-----------------~~~---~~~~~~~~~~v~ar~sP----- 735 (799)
.+.+...+.. . .++ .+.+.++++.+ .+..|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ei 177 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVRNYPEFRF-VRWHDVSTDV 177 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHHHCTTEEE-EEEETTEEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHHHHHHHHhCCCeEE-EEeCCceEEE
Confidence 0010100000 0 000 00011122211 12222
Q ss_pred ----ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 ----MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ----~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+|..-++.+.+.+| +-|+++||+.||.+||+.|++|+||| ++.+..|+.||.
T Consensus 178 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~ 237 (258)
T 2pq0_A 178 LPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADF 237 (258)
T ss_dssp EESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSE
T ss_pred EECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCE
Confidence 357777888776645 46899999999999999999999999 999999999998
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.52 E-value=3.1e-07 Score=87.84 Aligned_cols=100 Identities=13% Similarity=0.234 Sum_probs=81.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
.+.|++.++++.|++.|+++.++||.+...+..+.+++|+.. +|.. +..|.
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~~~~--~kp~~ 86 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE---------------------------IYTG--SYKKL 86 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------EEEC--C--CH
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------hccC--CCCCH
Confidence 346788999999999999999999999999999999999863 4443 33455
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..++.+.+++| +.+.|+||+.||.++++.|+++++++ ++.+..++.||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~ 138 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVY 138 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSE
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCE
Confidence 55554444324 46899999999999999999999998 889988989998
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.9e-07 Score=100.67 Aligned_cols=134 Identities=14% Similarity=0.210 Sum_probs=90.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchh------------------hhccCHHHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPE------------------FREKSDEEL 720 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~------------------~~~~~~~~~ 720 (799)
++++++.++++.|++ |+.+.++||++...+..+...+|+.... ...+...+ +....++++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l 181 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 181 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHHH
Confidence 568999999999999 9999999999977777888888874210 00011010 000000111
Q ss_pred hhhcCCc------eEEE----ecCcccHHHHHHHHHHhCC--CEEEEEcCCccCHHhhhcC----CeeeecCCCCCHHHH
Q 003740 721 SKLIPKI------QVMA----RSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEA----DIGLAMGIAGTEVEL 784 (799)
Q Consensus 721 ~~~~~~~------~v~a----r~sP~dK~~lV~~Lq~~~G--~vVa~~GDG~NDapAL~~A----dVGiamgi~gtevak 784 (799)
+.++++ ..+. -..+.+|...++.+... . ++|+++|||.||.+||+.| ++|+|| ++.+.+|
T Consensus 182 -~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~-~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk 257 (332)
T 1y8a_A 182 -RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES-KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYAL 257 (332)
T ss_dssp -HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH-HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHH
T ss_pred -HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh-hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHH
Confidence 111110 0010 11246798888877655 3 5699999999999999999 999999 8899999
Q ss_pred HhcCC-----ChHhHHHhh
Q 003740 785 ECCCF-----NFSSRKTYI 798 (799)
Q Consensus 785 ~aaDi-----nf~si~~~i 798 (799)
++||+ |...|.++|
T Consensus 258 ~~Ad~v~~~~~~dGV~~~l 276 (332)
T 1y8a_A 258 KHADVVIISPTAMSEAKVI 276 (332)
T ss_dssp TTCSEEEECSSTHHHHHHH
T ss_pred hhCcEEecCCCCCHHHHHH
Confidence 99998 566665544
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.48 E-value=4.1e-07 Score=90.50 Aligned_cols=126 Identities=15% Similarity=0.152 Sum_probs=89.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeecchhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..+....... .. ......+|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF-----------KE-LDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE-----------EE-EECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce-----------ec-cCCCCCCcc
Confidence 7899999999999999999999999999999999999995311 0111111000 00 001123455
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhc----CCeeeecCCCCCHHHHHhcCC---ChHhHHHhhC
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE----ADIGLAMGIAGTEVELECCCF---NFSSRKTYIL 799 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~----AdVGiamgi~gtevak~aaDi---nf~si~~~i~ 799 (799)
.|...+..+.....+.+.|+||+.||.+|+++ +.|+++|+ +..+..++.||. ++..+.+.|+
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~~~el~~~l~ 219 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARNVAELASLIM 219 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESSHHHHHHHHC
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCCHHHHHHhhC
Confidence 67666665522225789999999999999976 45666666 677888999998 9988888764
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.40 E-value=1.8e-06 Score=87.77 Aligned_cols=130 Identities=21% Similarity=0.290 Sum_probs=92.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeec-chh-------------------h-
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE-GPE-------------------F- 712 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~~-g~~-------------------~- 712 (799)
..+.+...+++++|+++|+++.++||.....+..+.+.+|+... ++ .+.. |+. +
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 35678899999999999999999999999999999999997431 11 1111 110 0
Q ss_pred --h-----------------ccCHHHHhhh---c-CCceEE-----EecCc--ccHHHHHHHHHHhCC---CEEEEEcCC
Q 003740 713 --R-----------------EKSDEELSKL---I-PKIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (799)
Q Consensus 713 --~-----------------~~~~~~~~~~---~-~~~~v~-----ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG 759 (799)
. ...++.+.+. + ..+.+. ....| ..|...++.+.+++| +.|+++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 0022222211 1 223333 12223 479999988876645 468999999
Q ss_pred ccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 760 TNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 760 ~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.||.+|++.|++|++|| ++.+..|+.||.
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~ 207 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADY 207 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSE
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCE
Confidence 99999999999999999 889988999987
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.39 E-value=3.3e-07 Score=92.86 Aligned_cols=119 Identities=25% Similarity=0.339 Sum_probs=87.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++.. ....|.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 163 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVE--------------------RGKPHP 163 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSS--------------------SCTTSS
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCC--------------------CCCCCH
Confidence 457899999999999999999999999999999999999875444444443311 011233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe---eeecCCCCCHHHHH-hcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVELE-CCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV---Giamgi~gtevak~-aaDi---nf~si~~~i 798 (799)
..++.+.+++| +.++|+||+.||..|++.|++ +++||.+..+..++ .||. ++..+.+.|
T Consensus 164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV 232 (237)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 33333333324 568999999999999999999 99999333344444 7888 888877655
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.38 E-value=5.6e-07 Score=90.71 Aligned_cols=126 Identities=17% Similarity=0.256 Sum_probs=87.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecch-hhhccCHHHHhhhcCCceEEEec-----
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMARS----- 733 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~v~ar~----- 733 (799)
++.||+.++++.|++.|+++.++|+.+...+..+.+.+|+.... .+... .+. ... .+.+.-
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~~~~~----------~~~-~~~~~~~~~~~ 152 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRLKFY----------FNG-EYAGFDETQPT 152 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECEEEC----------TTS-CEEEECTTSGG
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeeeEEEc----------CCC-cEecCCCCCcc
Confidence 67899999999999999999999999999999999999996310 00000 000 000 011211
Q ss_pred -CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHhhhcCCeeeecCCCC-CHHHHHhcCC---ChHhHHHhh
Q 003740 734 -SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 734 -sP~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdVGiamgi~g-tevak~aaDi---nf~si~~~i 798 (799)
.+..|-.+++.+.+++| +.+.|+||+.||.+|.++|++++++|... .+.....+|. +|..+.+.+
T Consensus 153 ~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 153 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred cCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 12467777777765546 67899999999999999999998887322 3444556777 787776543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.2e-06 Score=91.92 Aligned_cols=53 Identities=23% Similarity=0.282 Sum_probs=48.7
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+|..-++.+.+.+| +-|+++||+.||.+|++.|++|+||| +|.+..|++||.
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~ 265 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKH 265 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSE
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCe
Confidence 469999999888766 56999999999999999999999999 999999999998
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2.1e-07 Score=92.38 Aligned_cols=117 Identities=15% Similarity=0.101 Sum_probs=87.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.++. . ...-
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-------------------~--~~kp 128 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-------------------A--PPKP 128 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-------------------S--CCTT
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-------------------C--CCCC
Confidence 34689999999999999999999999999999999999986422 22222211 0 0112
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe-eeecCCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV-Giamgi~gtevak~aaDi---nf~si~~~i 798 (799)
|...++.+.+++| +.+.|+||+.||..|.+.|++ +|+|+ +|.+..++.||. ++..+.+.+
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~~~~el~~~~ 195 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHARDCAQLRDLL 195 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECSSHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeCCHHHHHHHH
Confidence 2334444444435 568999999999999999999 99999 887777888898 777776654
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=9e-07 Score=88.83 Aligned_cols=119 Identities=13% Similarity=0.150 Sum_probs=89.2
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++.. .+..|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~ 144 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDG--------------------KLSTK 144 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS--------------------SSCSH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCC--------------------CCCCC
Confidence 3568999999999999999999999999999999999999864333333222210 12335
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe---eeecCCCCCHHH--HHhcCC---ChHhHHHhh
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVE--LECCCF---NFSSRKTYI 798 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV---Giamgi~gteva--k~aaDi---nf~si~~~i 798 (799)
...++.+.+++| +.+.++||+.||.+|++.|++ +++|| .+..-. +..||. ++..+.+.+
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 555555544434 579999999999999999999 99999 555443 588887 777777654
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.34 E-value=8.5e-07 Score=92.15 Aligned_cols=53 Identities=32% Similarity=0.429 Sum_probs=48.7
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..|..-++.+.+.+| +-|+++||+.||.+|++.|++|+||| +|.+.+|++||.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~ 248 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADF 248 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSE
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCE
Confidence 579899998888766 46899999999999999999999999 999999999998
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.33 E-value=1.3e-06 Score=90.99 Aligned_cols=53 Identities=25% Similarity=0.367 Sum_probs=47.6
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..|..-++.+.+.+| +-++++||+.||.+|++.|++|+||| ++.+..|++||.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~ 254 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATS 254 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSE
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhh
Confidence 468888888877655 56899999999999999999999999 999999999997
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.8e-06 Score=91.76 Aligned_cols=54 Identities=20% Similarity=0.241 Sum_probs=49.0
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+..|..-++.+.+++| +-|+++||+.||.+|++.|++|+||| +|.+..|++||.
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~ 282 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANY 282 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSE
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccE
Confidence 3679989998887766 46999999999999999999999999 999999999998
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.4e-06 Score=87.70 Aligned_cols=119 Identities=14% Similarity=0.065 Sum_probs=88.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-+.++.+++.. .+..|.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 150 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVS--------------------YGKPDP 150 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSS--------------------CCTTST
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCC--------------------CCCCCh
Confidence 457899999999999999999999999999999999999875434444443321 112234
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe---eeecCCCCCHHHHHh-cCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVELEC-CCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV---Giamgi~gtevak~a-aDi---nf~si~~~i 798 (799)
..++.+.+++| +.++++||+.||..|++.|++ ++++|.+..+..++. ||. ++..+.+.|
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 44544444435 568999999999999999999 888885555555554 887 888877655
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.8e-06 Score=87.64 Aligned_cols=119 Identities=18% Similarity=0.149 Sum_probs=89.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++.. .+..|.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 169 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDG--------------------TRVNKN 169 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS--------------------CCCCHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccC--------------------CCCCCH
Confidence 468999999999999999999999999999999999999864332332222110 123455
Q ss_pred HHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCe---eeecCCCCCHH--HHHhcCC---ChHhHHHhhC
Q 003740 740 TLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV--ELECCCF---NFSSRKTYIL 799 (799)
Q Consensus 740 ~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdV---Giamgi~gtev--ak~aaDi---nf~si~~~i~ 799 (799)
..++.+.+++| +.++++||+.||..|++.|++ ++++| .+... .+..+|. +|..+.+.|+
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~~~~el~~~ll 240 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIVENVESIKDILL 240 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEESSSTTHHHHHC
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEECCHHHHHHHhC
Confidence 66665555434 358999999999999999999 88888 55543 3577887 8988888775
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.23 E-value=3.4e-06 Score=88.58 Aligned_cols=53 Identities=32% Similarity=0.424 Sum_probs=47.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..|+.||.
T Consensus 197 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~ 252 (282)
T 1rkq_A 197 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANF 252 (282)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSE
T ss_pred CCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCE
Confidence 389999998877645 46899999999999999999999999 999999999997
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.20 E-value=3e-07 Score=100.67 Aligned_cols=112 Identities=16% Similarity=0.185 Sum_probs=76.7
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeecchhhhccCHHHHhhhcCCceEEEe---
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMAR--- 732 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar--- 732 (799)
...++|++++.|+.|+++|++|+||||.....++.+|+++|+... .+.|+ |..+....+. .+..+
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~dG---------~~tg~~~~ 288 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDEG---------KILPKFDK 288 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTTC---------CEEEEECT
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecCC---------ceeeeecC
Confidence 345789999999999999999999999999999999999987421 11122 2221110000 02222
Q ss_pred ----cCcccHHHHHHHHHHh-CC-CEEEEEcCCccCHHhhhc-CCeeeecCCCC
Q 003740 733 ----SSPMDKHTLVKHLRTT-LG-EVVAVTGDGTNDAPALHE-ADIGLAMGIAG 779 (799)
Q Consensus 733 ----~sP~dK~~lV~~Lq~~-~G-~vVa~~GDG~NDapAL~~-AdVGiamgi~g 779 (799)
+..+.|...|+.+... .| ..|+++|||.||.|||++ +|.++.+.++.
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liinr 342 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR 342 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence 2346799999887422 12 346778999999999996 67777766554
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.18 E-value=1.6e-06 Score=88.74 Aligned_cols=122 Identities=19% Similarity=0.231 Sum_probs=84.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.... .-.|.--.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~----------------Kp~~~~~~ 177 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI----------------KPHPAPFY 177 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSC----------------TTSSHHHH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCC----------------CcCHHHHH
Confidence 56799999999999999999999999999999999999986543344444332100 00122223
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeee---cCCC-CCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGia---mgi~-gtevak~aaDi---nf~si~~~i 798 (799)
.+.+.+.-. .+.++|+||+.||.+|++.|+++.. .|.. +.+..+..+|. ++..+.+.+
T Consensus 178 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 178 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred HHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence 333333322 3578999999999999999998733 3311 34555777887 888877665
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.17 E-value=2.7e-06 Score=87.97 Aligned_cols=102 Identities=21% Similarity=0.254 Sum_probs=71.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.|++.+.++.|++.|+++.++|++....+..+.+.+|+.... ..++.++.... ....|.--
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------~kp~~~~~ 166 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA----------------GRPYPWMC 166 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC----------------CTTSSHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCC----------------CCCCHHHH
Confidence 45789999999999999999999999999888888888875431 33333332110 01122222
Q ss_pred HHHHHHHHHhCC-CEEEEEcCCccCHHhhhcCC---eeeecCCCC
Q 003740 739 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEAD---IGLAMGIAG 779 (799)
Q Consensus 739 ~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~Ad---VGiamgi~g 779 (799)
..+.+.+.-. . +.++|+||+.||.+|++.|+ |++++| ++
T Consensus 167 ~~~~~~lgi~-~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~ 209 (267)
T 1swv_A 167 YKNAMELGVY-PMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SS 209 (267)
T ss_dssp HHHHHHHTCC-SGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CT
T ss_pred HHHHHHhCCC-CCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CC
Confidence 3333333322 2 56999999999999999999 889898 55
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.7e-06 Score=86.32 Aligned_cols=114 Identities=17% Similarity=0.273 Sum_probs=82.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH-
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK- 738 (799)
++.|++.+.++.|++.|+++.++|+........+.+.+|+......++.+.+ .+..|
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~----------------------~~~~kp 151 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEK----------------------LPYSKP 151 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTT----------------------SSCCTT
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccc----------------------cCCCCC
Confidence 4468999999999999999999999999988999999998643223322221 11222
Q ss_pred -HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeec----CCCCCHHHHHhcCC---ChHhHHH
Q 003740 739 -HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVELECCCF---NFSSRKT 796 (799)
Q Consensus 739 -~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiam----gi~gtevak~aaDi---nf~si~~ 796 (799)
...++.+.+.+| +.++++||+.||.+|++.|+++++| + ++.+..++.||. ++..+..
T Consensus 152 ~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 152 HPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSCGGGCCH
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECCHHHHhH
Confidence 334443333324 5689999999999999999999999 6 555556777887 6665543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.5e-06 Score=88.64 Aligned_cols=133 Identities=15% Similarity=0.130 Sum_probs=88.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc--CCceEEEecCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMARSSPM 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~v~ar~sP~ 736 (799)
-+++||+.+.++.|+++|+++.++|+.....+..+.+ |+... ..++.++.... ...+...+ |.-..+-+....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~--~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFD--NDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECS--SSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEc--CCceEEecCCCCccccccccCC
Confidence 3578999999999999999999999999998888888 77443 33443332110 00000000 110000111245
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHh--cCC---ChHhHHHhh
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELEC--CCF---NFSSRKTYI 798 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~a--aDi---nf~si~~~i 798 (799)
+|...++.+.-. .+.+.|+||+.||.++.+.|++.++.+ ...+..++. +|. ||..+.+.|
T Consensus 151 ~K~~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 151 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred cHHHHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecCCHHHHHHHH
Confidence 788999888766 688999999999999999999998753 222223333 565 888877654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.9e-06 Score=84.64 Aligned_cols=117 Identities=14% Similarity=0.034 Sum_probs=79.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+.|++.+.++.|++.|+++.++|+........+.+.+|+...-..++.+++.. . +..|..
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~--~k~~~~ 149 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVT------------------H--HKPDPE 149 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCS------------------S--CTTSTH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcC------------------C--CCCChH
Confidence 35899999999999999999999999999999999999864333333332210 0 112223
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeec----CCCCCHHHHHh-cCC---ChHhHHHhh
Q 003740 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVELEC-CCF---NFSSRKTYI 798 (799)
Q Consensus 741 lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiam----gi~gtevak~a-aDi---nf~si~~~i 798 (799)
.++.+.+++| +.+.++||+.||.+|++.|+++++| + ++.+..++. ||. ++..+.+.|
T Consensus 150 ~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 150 GLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEESSGGGGC---
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEECCHHHHHHhh
Confidence 3333333334 4688999999999999999998887 5 444444444 776 666555443
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.11 E-value=6.4e-06 Score=85.83 Aligned_cols=53 Identities=26% Similarity=0.319 Sum_probs=47.4
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..|+.||.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~ 245 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARY 245 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSE
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCe
Confidence 488888888877655 46899999999999999999999999 999999999997
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.11 E-value=3.3e-06 Score=84.80 Aligned_cols=118 Identities=10% Similarity=0.044 Sum_probs=86.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++.. ...-|.
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 155 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVR--------------------LFKPHQ 155 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTT--------------------CCTTCH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcc--------------------cCCCCh
Confidence 567899999999999999999999999999999999999865333333333211 011123
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeec----CCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiam----gi~gtevak~aaDi---nf~si~~~i 798 (799)
..++.+.+.+| +.+.++||+.||..|.+.|+++++| + ++.+..+..+|. ++..+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSN-GVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTS-CCCCCSSCCCSEEESSHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCC-CccccccCCCcEEeCCHHHHHHHH
Confidence 34443333324 5689999999999999999999999 4 444545567777 888777654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.07 E-value=6.9e-06 Score=82.67 Aligned_cols=115 Identities=21% Similarity=0.208 Sum_probs=78.3
Q ss_pred CcccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 661 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 661 ~R~~v~~aI~~l~~a-GI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
+.|++.+.++.|++. |+++.++|+.....+..+.+.+|+...-..++.+.+.. ..|.-+.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------------~~~k~~~ 154 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDAL-------------------DRNELPH 154 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCS-------------------SGGGHHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCc-------------------CccchHH
Confidence 579999999999999 99999999999999999999999864322222222210 0121223
Q ss_pred HHHHHHHHhCC-----CEEEEEcCCccCHHhhhcCC---eeeecCCCCCHHHHHh--cCC---ChHhHH
Q 003740 740 TLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVELEC--CCF---NFSSRK 795 (799)
Q Consensus 740 ~lV~~Lq~~~G-----~vVa~~GDG~NDapAL~~Ad---VGiamgi~gtevak~a--aDi---nf~si~ 795 (799)
..++.+.+++| +.+.|+||+.||.+|++.|+ |++++| .+..-.... +|. ++..+.
T Consensus 155 ~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~~~~el~ 222 (234)
T 2hcf_A 155 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFKNFAETD 222 (234)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEESCSCCHH
T ss_pred HHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeCCHHhHH
Confidence 33333333225 57899999999999999999 777777 444433332 665 444443
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=98.06 E-value=5.1e-07 Score=56.58 Aligned_cols=25 Identities=60% Similarity=0.954 Sum_probs=22.9
Q ss_pred HHHHHHHhhhccccccccccccccc
Q 003740 21 ALQRWRKLCGFVKNRKRRFRFTANL 45 (799)
Q Consensus 21 ~~~~~r~~~~~~~~~~r~f~~~~~~ 45 (799)
+++|||+|+++++|++|||||+++|
T Consensus 1 al~rWR~a~~~v~n~~rrfr~~~~L 25 (26)
T 2l1w_B 1 ARQRWRSSVSIVKNRARRFRMISNL 25 (26)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHC
T ss_pred CchhHHHHHHHHhCccccccccccc
Confidence 4799999998999999999999977
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.04 E-value=1.6e-05 Score=79.96 Aligned_cols=117 Identities=18% Similarity=0.172 Sum_probs=86.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-+.++.+++.. ...| |.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~------------------~~kp--~~ 158 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAG------------------FFKP--HP 158 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHT------------------BCTT--SH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccC------------------CCCc--CH
Confidence 5679999999999999 9999999999999999999999865333333333211 0111 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCC---eeeecCCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEAD---IGLAMGIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~Ad---VGiamgi~gtevak~aaDi---nf~si~~~i 798 (799)
.+++.+.+++| +.+.++||+. ||..|.+.|+ +++++| ++.+-.++.+|. ++..+.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESSTHHHHHHH
T ss_pred HHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCCHHHHHHHH
Confidence 33333333324 6799999997 9999999999 799999 777777778888 777776654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.02 E-value=3.3e-05 Score=80.21 Aligned_cols=62 Identities=29% Similarity=0.328 Sum_probs=51.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..|+.||. +-..|.++|
T Consensus 189 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i 258 (268)
T 1nf2_A 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVL 258 (268)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHH
Confidence 389988888877645 56899999999999999999999999 899999999997 344555554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.00 E-value=4.8e-06 Score=83.89 Aligned_cols=118 Identities=9% Similarity=0.024 Sum_probs=85.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+.+... +.-|.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------------~kp~~ 158 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRL--------------------YKTAP 158 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTC--------------------CTTSH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCC--------------------CCcCH
Confidence 4578999999999999999999999999999999999998754444444333210 11122
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeec----CCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiam----gi~gtevak~aaDi---nf~si~~~i 798 (799)
.+++.+.+++| +.+.|+||+.||..|.+.|+++.+| + ++.+..+..+|. ++..+.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 159 AAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEECCHHHHHHHH
Confidence 22332222224 6789999999999999999999999 6 555555667887 787777654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.00 E-value=1e-05 Score=84.98 Aligned_cols=117 Identities=17% Similarity=0.145 Sum_probs=81.5
Q ss_pred CCcccHHHHHHHHHhC-CCEEEEEcCC---------------------CHHHHHHHHHHcCCccCCceeecchhhhccCH
Q 003740 660 PMRPGVKESVAICRSA-GITVRMVTGD---------------------NINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~a-GI~v~mlTGD---------------------~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~ 717 (799)
..++++.+.++.+++. |+++...|.. ....+..+.+..|+... +.....+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~--- 195 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN---INRCNPLAG--- 195 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE---EEECCGGGT---
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE---EEEcccccc---
Confidence 4688999999999988 9998888876 34445555566665321 000000000
Q ss_pred HHHhhhcCCceEEEecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 718 EELSKLIPKIQVMARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
-+.-..+....| ..|...++.+.+++| +.++|+||+.||.+|++.|++|++|| ++.+..++.||.
T Consensus 196 ------~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~ 265 (289)
T 3gyg_A 196 ------DPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNL 265 (289)
T ss_dssp ------CCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCC
T ss_pred ------CCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCE
Confidence 000012333333 578888888777655 46899999999999999999999999 999999999998
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.00 E-value=3.8e-06 Score=82.32 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=79.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+....... ..+.+|+......++.+.+... ..-.|+--.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 147 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFV----------------RKPSPEAAT 147 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCC----------------CTTSSHHHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCC----------------CCCCcHHHH
Confidence 35799999999999999999999999988888 8888888543222332222100 001121112
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee-eecCCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG-iamgi~gtevak~aaDi---nf~si~~~i 798 (799)
.+.+.+.-. .+.++++||+.||.+|++.|+++ ++|+ +|. - .||. ++..+.+.+
T Consensus 148 ~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 148 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQALADISRIF 204 (207)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECSSTTHHHHHT
T ss_pred HHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeCCHHHHHHHH
Confidence 333333322 35689999999999999999997 8898 776 2 5676 777776654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.00 E-value=3.2e-06 Score=83.53 Aligned_cols=121 Identities=15% Similarity=0.135 Sum_probs=84.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++... ..-.|+--.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 152 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKE----------------SKPNPEIYL 152 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSS----------------CTTSSHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccC----------------CCCChHHHH
Confidence 4579999999999999999999999999999999999999754344444333210 001111122
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCC-CHHHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~g-tevak~aaDi---nf~si~~~ 797 (799)
.+.+.+.-. .+.++++||+.||..|.+.|+++.+|..++ ....+..+|. ++..+.+.
T Consensus 153 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 153 TALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred HHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 233333222 256899999999999999999988887433 3334466776 77776654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.99 E-value=9.7e-06 Score=83.88 Aligned_cols=97 Identities=13% Similarity=0.032 Sum_probs=71.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-CceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+.++.+++.. ...-|
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~kp~ 170 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV--------------------RGRPF 170 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSS--------------------SCTTS
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcC--------------------CCCCC
Confidence 5678999999999999999999999999999999999987653 33444433311 01122
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHhhhcCC---eeeecC
Q 003740 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD---IGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~Ad---VGiamg 776 (799)
...++.+.+++| +.+.|+||+.||..|.+.|+ |++++|
T Consensus 171 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 171 PDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp SHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred HHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 333333333323 56899999999999999999 688888
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.4e-05 Score=80.32 Aligned_cols=116 Identities=13% Similarity=0.165 Sum_probs=81.0
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~---~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
+.|++.+.++.|++.|+++.++|+.. ......+.+.+|+...-..++.+.+.. ...|
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~kp-- 159 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL------------------SYKP-- 159 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHT------------------CCTT--
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccC------------------CCCC--
Confidence 47999999999999999999999999 888889999999865433344333221 0112
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCeeeec---CCCCCHHHHHhcCC---ChHhHHHh
Q 003740 738 KHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVELECCCF---NFSSRKTY 797 (799)
Q Consensus 738 K~~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdVGiam---gi~gtevak~aaDi---nf~si~~~ 797 (799)
|..+++.+.+++| +.++++||+. ||..|++.|+++++| | +..+-.++.+|. ++..+.+.
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEESSGGGHHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHhhHHHHHHH
Confidence 2333443333335 5789999999 999999999999999 5 333323344555 66666544
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=4.3e-06 Score=87.44 Aligned_cols=123 Identities=10% Similarity=-0.072 Sum_probs=85.5
Q ss_pred CCCcccHHHHHHHHHhCCC--EEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 659 DPMRPGVKESVAICRSAGI--TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI--~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+...-+.++.++.... .. ..+.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~--------------~~--~~~K 204 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRT--------------DT--LVCK 204 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSC--------------SS--CCCT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCC--------------cc--cCCC
Confidence 3568999999999999999 9999999999999999999999754333333222100 00 1123
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHH------HhcCC---ChHhHHHhh
Q 003740 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVEL------ECCCF---NFSSRKTYI 798 (799)
Q Consensus 737 dK~~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak------~aaDi---nf~si~~~i 798 (799)
-|...++.+.+++| +.+.|+||+.||..|.++|++|.+|+. +.+..+ ..||. ++..+.+.+
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~~~ad~vi~sl~el~~~l 278 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHL-VENEVNEILGQTPEGAIVISDILELPHVV 278 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEE-CSCCC----CCCCTTCEEESSGGGGGGTS
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEE-cCCccccccccCCCCCEEeCCHHHHHHHh
Confidence 35555555444324 578999999999999999999999984 433322 25565 666665543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.97 E-value=9.5e-06 Score=81.73 Aligned_cols=109 Identities=15% Similarity=0.141 Sum_probs=71.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...-..++.+++.. ...-.|+-=.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 153 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLA----------------KGKPDPDIFL 153 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC-------------------------CCHHH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCC----------------CCCCChHHHH
Confidence 3689999999999999999999999754 778889999865444444443311 1111222223
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+.+.+.-. .+.+.|+||+.||..|.+.|+++++|. ++.+..+ .||.
T Consensus 154 ~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~ 200 (233)
T 3nas_A 154 TAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADL 200 (233)
T ss_dssp HHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSE
T ss_pred HHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCE
Confidence 344444322 367899999999999999999999998 6666555 6776
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.96 E-value=5.6e-06 Score=82.46 Aligned_cols=106 Identities=11% Similarity=0.050 Sum_probs=75.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+...-..++.+++.. ..-| |.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp--~~ 148 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVA------------------ASKP--AP 148 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSS------------------SCTT--SS
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCC------------------CCCC--Ch
Confidence 45789999999999999999999998 44567778888864333333333211 1112 11
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..++.+.+++| +.+.++||+.||.+|++.|+++++|+ ++.+..+ .||.
T Consensus 149 ~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~ 199 (221)
T 2wf7_A 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIV 199 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSE
T ss_pred HHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccc
Confidence 23333333324 56899999999999999999999999 7777666 7776
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.5e-05 Score=82.05 Aligned_cols=53 Identities=23% Similarity=0.207 Sum_probs=44.7
Q ss_pred ccHHHHHHHHHHhC---C-CEEEEEcCCccCHHhhhcCCeeeecCCCCC-HHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTL---G-EVVAVTGDGTNDAPALHEADIGLAMGIAGT-EVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~---G-~vVa~~GDG~NDapAL~~AdVGiamgi~gt-evak~aaDi 789 (799)
.+|..-++.|.+.+ + +.|+++||+.||.+||+.|++|+||| ++. +..|+.||.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~ 235 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSI 235 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceE
Confidence 46999998887662 2 57999999999999999999999999 887 666777775
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.95 E-value=4.3e-06 Score=84.12 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=79.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. ...-.|+--.
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 146 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFG----------------EKKPSPTPVL 146 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSC----------------TTCCTTHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCC----------------CCCCChHHHH
Confidence 468999999999999999999999999999999999999864333333333211 0011222223
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee-ee--cCCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LA--MGIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG-ia--mgi~gtevak~aaDi---nf~si~~~i 798 (799)
.+.+.+.-. .+.++|+||+.||.+|.+.|++. ++ .|....+. ..+|. ++..+.+.+
T Consensus 147 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~--~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 147 KTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS--QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC--CCCSEEESSTTHHHHHH
T ss_pred HHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc--cCCCEEECCHHHHHHHH
Confidence 333333322 35689999999999999999977 44 44211222 45665 777666543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=3.1e-05 Score=79.32 Aligned_cols=122 Identities=17% Similarity=0.279 Sum_probs=81.6
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc------CCc-eeecchh--------hh-cc-----------
Q 003740 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT------DNG-IAIEGPE--------FR-EK----------- 715 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~------~~~-~~~~g~~--------~~-~~----------- 715 (799)
+...+++++++ .|++++++||.....+..+.+++|+.. .++ .+..... +. ..
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHHh
Confidence 46677787765 689999999999999999999988742 122 1111000 00 00
Q ss_pred ---------------------CH-------HHHhhhcC----CceEE------EecCc--ccHHHHHHHHHHhCC---CE
Q 003740 716 ---------------------SD-------EELSKLIP----KIQVM------ARSSP--MDKHTLVKHLRTTLG---EV 752 (799)
Q Consensus 716 ---------------------~~-------~~~~~~~~----~~~v~------ar~sP--~dK~~lV~~Lq~~~G---~v 752 (799)
.+ +++.+.+. .+.+. -...| .+|...++.+.+.+| +.
T Consensus 101 ~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~ 180 (244)
T 1s2o_A 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred ccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHH
Confidence 00 01222111 22221 11223 378888888887755 46
Q ss_pred EEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHh
Q 003740 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVELEC 786 (799)
Q Consensus 753 Va~~GDG~NDapAL~~AdVGiamgi~gtevak~a 786 (799)
|+++||+.||.+|++.|++|++|| ++.+..|+.
T Consensus 181 ~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~ 213 (244)
T 1s2o_A 181 TLVCGDSGNDIGLFETSARGVIVR-NAQPELLHW 213 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHH
T ss_pred EEEECCchhhHHHHhccCcEEEEc-CCcHHHHHH
Confidence 899999999999999999999999 999998885
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.93 E-value=9.1e-06 Score=81.82 Aligned_cols=118 Identities=16% Similarity=0.169 Sum_probs=77.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+.+... ..-.|+--.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~Kp~~~~~~ 166 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGT----------------IKPSPEPVL 166 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSC----------------CTTSSHHHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCC----------------CCCChHHHH
Confidence 4579999999999999999999999999999999999998643223322222100 000111112
Q ss_pred HHHHHHHHhCCC-EEEEEcCCccCHHhhhcCCe-eeecCCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLGE-VVAVTGDGTNDAPALHEADI-GLAMGIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G~-vVa~~GDG~NDapAL~~AdV-Giamgi~gtevak~aaDi---nf~si~~~i 798 (799)
.+.+.+.-. .+ .+.++||+.||..|.++|++ ++.|+ ++.+ ..+|. +|..+.+.|
T Consensus 167 ~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 167 AALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp HHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEESSHHHHHHHH
T ss_pred HHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeCCHHHHHHHH
Confidence 333333222 23 68999999999999999997 88887 6554 23444 777766544
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.92 E-value=4.6e-06 Score=85.30 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=80.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH-HHcCCccCCceeecch--hhhccCHHHHhhhcCCceEEEecCcc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA-RECGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA-~~~GI~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
++.|++.+.++.|++.|+++.++|+.....+...- +..|+...-+.++.++ +.. ...
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~--------------------~~K 171 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQ--------------------HGK 171 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCC--------------------SCT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhcc--------------------CCC
Confidence 46889999999999999999999999876655433 2235433222232222 110 011
Q ss_pred cHHHHHHHHHHhCC-----CEEEEEcCCccCHHhhhcCC---eeeecCCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 737 DKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 737 dK~~lV~~Lq~~~G-----~vVa~~GDG~NDapAL~~Ad---VGiamgi~gtevak~aaDi---nf~si~~~i 798 (799)
-|..+++.+.+++| +.+.|+||+.||..|.+.|+ |++++| ++.+..+..||. ++..+...+
T Consensus 172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSCGGGCCGGG
T ss_pred CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecCHHHhhHHH
Confidence 12334444444435 67899999999999999999 788888 766667888887 777665543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.92 E-value=6.5e-05 Score=78.87 Aligned_cols=52 Identities=33% Similarity=0.344 Sum_probs=46.0
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..|+.||.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~ 270 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADA 270 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSE
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCce
Confidence 67777888877655 46899999999999999999999999 999999999987
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=2.2e-05 Score=81.03 Aligned_cols=50 Identities=26% Similarity=0.364 Sum_probs=43.8
Q ss_pred ccHHHHHHHHHHhCC-----CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G-----~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+|..-++.+.+.+| ..++++||+.||.+|++.|++|++|| ++.+ . +++.
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~ 229 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVL 229 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCE
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcE
Confidence 689999999988766 67999999999999999999999999 8888 3 5554
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.89 E-value=2.8e-05 Score=75.46 Aligned_cols=107 Identities=14% Similarity=0.002 Sum_probs=75.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+...-..++.+.+. .. +..|..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~------------------~~--~kp~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSG------------------FK--RKPNPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGC------------------CC--CTTSCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeecccc------------------CC--CCCCHH
Confidence 579999999999999999999999864 567788888886432233333221 11 112333
Q ss_pred HHHHHHHhCCC-EEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 741 LVKHLRTTLGE-VVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 741 lV~~Lq~~~G~-vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.++.+.+++|- .+.++||+.||.+|++.|++++++. +...-.++..+|
T Consensus 142 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~~ 190 (190)
T 2fi1_A 142 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 190 (190)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccCC
Confidence 44444444343 6899999999999999999999887 666666666554
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=1.3e-05 Score=81.42 Aligned_cols=118 Identities=11% Similarity=0.072 Sum_probs=81.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+.+.. . +.-|.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~--~Kp~~ 164 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLK------------------I--YKPDP 164 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTT------------------C--CTTSH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccC------------------C--CCCCH
Confidence 467999999999999999999999999999999999999865433344333221 0 11122
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCC---eeeecCCCCCHHHHHhc-CC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVELECC-CF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~Ad---VGiamgi~gtevak~aa-Di---nf~si~~~i 798 (799)
..++.+.+++| +.+.|+||+.||..+.+.|+ +++..| .+.+..+..+ |. ++..+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEESSGGGHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeCCHHHHHHHH
Confidence 33333222224 56889999999999999999 566666 3333334445 76 777766554
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.84 E-value=9.4e-06 Score=81.79 Aligned_cols=121 Identities=7% Similarity=-0.009 Sum_probs=80.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++... ..-.|.--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 158 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV----------------YKPDNRVYE 158 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC----------------CTTSHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCC----------------CCCCHHHHH
Confidence 4679999999999999999999999999999999999998653333433332110 011111122
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCC---CCCHHHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi---~gtevak~aaDi---nf~si~~~ 797 (799)
.+.+.+.-. .+.+.|+||+.||..|.+.|+++.+|-. +..+..+..+|. ++..+...
T Consensus 159 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 159 LAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 233333212 2468899999999999999999998832 222333445665 66666554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.83 E-value=8.5e-05 Score=75.33 Aligned_cols=118 Identities=16% Similarity=0.132 Sum_probs=80.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++.. ...| |.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp--~~ 153 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEG------------------VKKP--HP 153 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGT------------------CCTT--CH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCC------------------CCCC--CH
Confidence 357899999999999999999999999999999999999865333333333211 0111 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCeeeec---CCCCCHHHHH---hcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVELE---CCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdVGiam---gi~gtevak~---aaDi---nf~si~~~i 798 (799)
.+++.+.+++| +.+.|+||+. ||..|.+.|+++.+. | .+.....+ .+|. ++..+.+.+
T Consensus 154 ~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 154 KIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEESSTTHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEECCHHHHHHHH
Confidence 33333322224 5689999998 999999999986544 5 44444432 5675 777666543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.3e-05 Score=77.68 Aligned_cols=114 Identities=17% Similarity=0.133 Sum_probs=76.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcC--CccCCceeec-----chhhhccCH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECG--ILTDNGIAIE-----GPEFREKSD 717 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~aiA~~~G--I~~~~~~~~~-----g~~~~~~~~ 717 (799)
++.|++.++++.|++.|+++.++|+... ..+..+.+.+| +.. ++. +++
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----~~~~~~~~~~~------ 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA----IFMCPHGPDDG------ 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE----EEEECCCTTSC------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEEcCCCCCCC------
Confidence 5689999999999999999999999985 56667777888 422 110 000
Q ss_pred HHHhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCC---eeeecCCCCCHHHH----Hhc
Q 003740 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVEL----ECC 787 (799)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~Ad---VGiamgi~gtevak----~aa 787 (799)
....-|.- .-+-+.+++. | +.+.|+||+.||..+.++|+ |++++| .+.+... ..+
T Consensus 97 ------------~~~~KP~~-~~~~~~~~~~-~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~ 161 (179)
T 3l8h_A 97 ------------CACRKPLP-GMYRDIARRY-DVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEG 161 (179)
T ss_dssp ------------CSSSTTSS-HHHHHHHHHH-TCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTT
T ss_pred ------------CCCCCCCH-HHHHHHHHHc-CCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCC
Confidence 00111111 1222233332 4 56899999999999999999 588888 5555444 345
Q ss_pred CC---ChHhHHHhh
Q 003740 788 CF---NFSSRKTYI 798 (799)
Q Consensus 788 Di---nf~si~~~i 798 (799)
|. ++..+.+.|
T Consensus 162 d~v~~~l~el~~~l 175 (179)
T 3l8h_A 162 TRVCEDLAAVAEQL 175 (179)
T ss_dssp EEEESSHHHHHHHH
T ss_pred cEEecCHHHHHHHH
Confidence 66 888877665
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.81 E-value=2.8e-05 Score=78.95 Aligned_cols=117 Identities=15% Similarity=0.070 Sum_probs=79.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
++.|++.+.++.|++.|+++.++|+.....+....+. |+...- +.++.+++.. . +.-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~------------------~--~kp 167 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK------------------Y--GKP 167 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS------------------S--CTT
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC------------------C--CCC
Confidence 5679999999999999999999999988877777777 886543 3444444321 1 111
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe-eeecCCCCCHHHH----HhcCC---ChHhHHHhh
Q 003740 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVEL----ECCCF---NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV-Giamgi~gtevak----~aaDi---nf~si~~~i 798 (799)
|...++.+.+++| +.+.|+||+.||..|.+.|++ ++.++ .|....+ ..||. +|..+.+.|
T Consensus 168 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 168 NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFPSMQTLCDSW 238 (243)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEESCHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 2233333333324 568999999999999999998 44454 5443333 35786 777776554
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.77 E-value=3.3e-05 Score=78.53 Aligned_cols=116 Identities=12% Similarity=0.133 Sum_probs=80.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+.|++.+.++.|++.|+++.++|+.....+..+-+.+|+. .-+.++.+++.. .+.-|-.
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~--------------------~~Kp~p~ 169 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGI--------------------RRKPAPD 169 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTS--------------------CCTTSSH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCC--------------------CCCCCHH
Confidence 4689999999999999999999999988889999999975 433333333210 1122223
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee---eecCCCCC-H-HHHHhcCC---ChHhHHHhh
Q 003740 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG---LAMGIAGT-E-VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 741 lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG---iamgi~gt-e-vak~aaDi---nf~si~~~i 798 (799)
+++.+.+++| +.+.|+||+.||..|.+.|++. +++| .+. + ..+..+|. ++..+...+
T Consensus 170 ~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 170 MTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEECCHHHHHHHh
Confidence 3333322224 5689999999999999999994 6666 433 3 33345776 787776654
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.77 E-value=3.7e-05 Score=76.87 Aligned_cols=113 Identities=12% Similarity=0.087 Sum_probs=82.4
Q ss_pred CCcccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aG-I~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.|++.+.++.|++.| +++.++|+........+.+.+|+....+. +++...| |
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~-----------------------~~~~~kp--k 159 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDH-----------------------IEVMSDK--T 159 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSE-----------------------EEEESCC--S
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhe-----------------------eeecCCC--C
Confidence 45789999999999999 99999999999999999999998542111 3333333 6
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCeeeec-------CCCCCHHHHHhc-CC---ChHhHHHhh
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM-------GIAGTEVELECC-CF---NFSSRKTYI 798 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdVGiam-------gi~gtevak~aa-Di---nf~si~~~i 798 (799)
...++.+.+++| +.++++||+. ||..|.+.|+++.+| | .+.+..+..+ |. ++..+...|
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g-~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWK-HEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCC-CC---CCCCTTEEECSSGGGHHHHC
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccc-cCCcccccCCCceecccHHHHHHhc
Confidence 666666655545 5689999996 999999999998887 3 2322223333 66 888877664
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.76 E-value=9.2e-05 Score=77.22 Aligned_cols=40 Identities=10% Similarity=0.085 Sum_probs=36.6
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
+-+...++|++|++.|+++.++||.....+..+.+++|+.
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3466899999999999999999999999999999999874
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.75 E-value=4.6e-05 Score=74.47 Aligned_cols=87 Identities=15% Similarity=0.181 Sum_probs=67.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe--cCcc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR--SSPM 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar--~sP~ 736 (799)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+... |.. ..+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~---------------------------f~~~~~~~~ 120 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY---------------------------FVHREIYPG 120 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT---------------------------EEEEEESSS
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh---------------------------cceeEEEeC
Confidence 578999999999999999999999998 7999999999999642 211 2334
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.|....+.+.+++| +.+.|+||+.||..+.++|++..
T Consensus 121 ~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 121 SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp CHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred chHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 56555544433325 46889999999999999999753
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.75 E-value=7.2e-06 Score=81.24 Aligned_cols=115 Identities=12% Similarity=0.184 Sum_probs=81.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH-
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK- 738 (799)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-+.++.+.+ ....|
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~----------------------~~~~KP 139 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADD----------------------TPKRKP 139 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGG----------------------SSCCTT
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCc----------------------CCCCCC
Confidence 4589999999999999 99999999999999999999998543222332222 12334
Q ss_pred -HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCC--C-CCHHHHHhcCC---ChHhHHHhh
Q 003740 739 -HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI--A-GTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 739 -~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi--~-gtevak~aaDi---nf~si~~~i 798 (799)
...++.+.+++| +.+.++||+.||.+|.+.|+++++|.. . ..+..++ +|. ++..+.+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 140 DPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILELF 208 (209)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGGC
T ss_pred CcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHhh
Confidence 333333333324 578999999999999999999999742 2 2343444 776 777776654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.74 E-value=6.7e-05 Score=75.42 Aligned_cols=117 Identities=10% Similarity=0.033 Sum_probs=83.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|+ .|+++.++|+.....+..+-+.+|+...-+.++.+++.. ...-|.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 165 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG--------------------VLKPRP 165 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTT--------------------CCTTSH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCC--------------------CCCCCH
Confidence 45789999999999 999999999999999999999999865433343333211 112234
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCeeeecCCCCCH-HHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAGTE-VELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdVGiamgi~gte-vak~aaDi---nf~si~~~ 797 (799)
..++.+.+++| +.++++||+. ||..|.+.|+++++|+..+.. ..+..+|. ++..+.++
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 44444444435 5789999995 999999999999999844432 34455666 66666543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.73 E-value=9.3e-05 Score=76.37 Aligned_cols=133 Identities=23% Similarity=0.257 Sum_probs=84.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCH------HHHH-HHHHHcCC-ccC------------CceeecchhhhccCHHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNI------NTAK-AIARECGI-LTD------------NGIAIEGPEFREKSDEEL 720 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~------~tA~-aiA~~~GI-~~~------------~~~~~~g~~~~~~~~~~~ 720 (799)
.++.+.+.++.|++.|+.+.+.|+|.. .... ..-..+++ ... ...++.+++- ...++
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~ 162 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEE---EEKEV 162 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHH---HHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHH---HHHHH
Confidence 368899999999999999888888764 1111 11122332 000 0111111110 01123
Q ss_pred hhhcCCceEEEecC---------cccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC
Q 003740 721 SKLIPKIQVMARSS---------PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 721 ~~~~~~~~v~ar~s---------P~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD 788 (799)
.+.++.+.+. ++. ...|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..|+.||
T Consensus 163 ~~~~~~~~~~-~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~ 240 (261)
T 2rbk_A 163 LPSIPTCEIG-RWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAAD 240 (261)
T ss_dssp GGGSTTCEEE-CSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSS
T ss_pred HHhcCCeEEE-EecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCC
Confidence 3344444332 222 3588888888876645 46899999999999999999999999 99998899999
Q ss_pred C---ChHh--HHHhh
Q 003740 789 F---NFSS--RKTYI 798 (799)
Q Consensus 789 i---nf~s--i~~~i 798 (799)
. +... +.+.|
T Consensus 241 ~v~~~~~~dGv~~~l 255 (261)
T 2rbk_A 241 YVTAPIDEDGISKAM 255 (261)
T ss_dssp EECCCGGGTHHHHHH
T ss_pred EEeccCchhhHHHHH
Confidence 8 5544 55443
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.73 E-value=9.7e-05 Score=74.20 Aligned_cols=117 Identities=11% Similarity=0.060 Sum_probs=84.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-+.++.+.+.. ...-|.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 161 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG--------------------FQKPMK 161 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT--------------------SCTTCH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC--------------------CCCCCh
Confidence 5678999999999999 9999999999999999999999865433333333211 112234
Q ss_pred HHHHHHHHhCC----CEEEEEcCCc-cCHHhhhcCCee-eecCCCC--CHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIG-LAMGIAG--TEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G----~vVa~~GDG~-NDapAL~~AdVG-iamgi~g--tevak~aaDi---nf~si~~~i 798 (799)
..++.+.+++| +.+.++||+. ||..|.+.|+++ +.++ .| .+..+..+|. ++..+.+.|
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMN-PDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEEC-TTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEEC-CCCCCCcccCCCCeEECCHHHHHHHH
Confidence 45555544446 5799999998 999999999995 3333 43 5555667787 787777665
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.69 E-value=3e-05 Score=78.61 Aligned_cols=121 Identities=14% Similarity=0.065 Sum_probs=75.7
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeecchhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+...- +.++.+++... ..-.|.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~----------------~kp~~~ 169 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKY----------------GKPNPE 169 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSS----------------CTTSSH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCC----------------CCCCCH
Confidence 35679999999999999999999999998877777777 886543 34444443210 011122
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee---eecCCCCCHH--HHHhcCC---ChHhHHHhh
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGTEV--ELECCCF---NFSSRKTYI 798 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG---iamgi~gtev--ak~aaDi---nf~si~~~i 798 (799)
--..+.+.+.-. .+.+.|+||+.||..|.+.|++. +..| .+..- .+..||. ++..+.+.|
T Consensus 170 ~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 170 PYLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVNTG-PLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEECCS-SSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred HHHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEcCC-CCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 122233333222 25689999999999999999953 4334 22222 2236887 777766554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.67 E-value=2e-05 Score=80.94 Aligned_cols=119 Identities=14% Similarity=0.111 Sum_probs=81.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-eecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+++.. .. +.-|
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~-----------------~~--~Kp~ 170 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVG-----------------GR--GKPH 170 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGT-----------------TC--CTTS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcC-----------------cC--CCCC
Confidence 3468999999999999999999999999999999999998532122 33222211 00 1112
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee-eecCCCC-------C-HHHHHhcCC---ChHhHHHhh
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAG-------T-EVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG-iamgi~g-------t-evak~aaDi---nf~si~~~i 798 (799)
...++.+.+++| +.++++||+.||..|.+.|+++ +.+. .| . +..+..+|. ++..+.+.+
T Consensus 171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l 244 (259)
T 4eek_A 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLTSHAELRAAL 244 (259)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEECSHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhCCHHHHHHHH
Confidence 333343333334 6799999999999999999998 4443 33 2 334455887 887777654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.67 E-value=4.6e-05 Score=74.97 Aligned_cols=116 Identities=12% Similarity=0.074 Sum_probs=78.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+...-..++.+.+.. +..| |.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp--~~ 131 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVK------------------EYKP--SP 131 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT------------------CCTT--CH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcC------------------CCCC--CH
Confidence 45789999 9999999 9999999999999999999999865433444333211 1122 12
Q ss_pred HHHHHHHHhCC-CEEEEEcCCccCHHhhhcCCeeeec----CCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdVGiam----gi~gtevak~aaDi---nf~si~~~i 798 (799)
.+++.+.+++| +.+.|+||+.||..|.+.|+++.+| + ++.+..+..+|. ++..+.+.+
T Consensus 132 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~el~~~l 197 (201)
T 2w43_A 132 KVYKYFLDSIGAKEAFLVSSNAFDVIGAKNAGMRSIFVNRKN-TIVDPIGGKPDVIVNDFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHHTCSCCEEEESCHHHHHHHHHTTCEEEEECSSS-CCCCTTSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEeCCHHHhHHHHHCCCEEEEECCCC-CCccccCCCCCEEECCHHHHHHHH
Confidence 33332222224 5678999999999999999999877 3 333322345665 777666543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.64 E-value=5.2e-05 Score=75.81 Aligned_cols=114 Identities=10% Similarity=0.108 Sum_probs=77.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCc--c
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP--~ 736 (799)
++.|++.+.++.|+. ++.++|+........+.+++|+...- ..++.++... .+ .
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~--------------------~~~~k 143 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLG--------------------ADRVK 143 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHC--------------------TTCCT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccc--------------------cCCCC
Confidence 346788888888774 89999999999999999999986432 2333322210 11 2
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee-eecCCCCCH-------HHHHh-cCC---ChHhHHHh
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTE-------VELEC-CCF---NFSSRKTY 797 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG-iamgi~gte-------vak~a-aDi---nf~si~~~ 797 (799)
.|...++.+.+++| +.+.++||+.||.+|++.|+++ ++|+ ++.+ ..|+. ||. ++..+.+.
T Consensus 144 pk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 144 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred cCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 23344444333324 5689999999999999999998 7777 6554 25565 887 66666544
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=9.3e-05 Score=73.88 Aligned_cols=128 Identities=14% Similarity=0.098 Sum_probs=77.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDN---------------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~---------------~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+. -...+...........+ ..
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f~~~~~~~~~~~~~~~~----~~ 124 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEE----FR 124 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGG----GB
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-eEEEEECCcCCCCcccc----cC
Confidence 678999999999999999999999999 46778888888984 11111111100000000 00
Q ss_pred CCceEEEecCcccHHHHHH-HHHHhCC---CEEEEEcCCccCHHhhhcCC----eeeecCCCCCHHHHHhcCC---ChHh
Q 003740 725 PKIQVMARSSPMDKHTLVK-HLRTTLG---EVVAVTGDGTNDAPALHEAD----IGLAMGIAGTEVELECCCF---NFSS 793 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~-~Lq~~~G---~vVa~~GDG~NDapAL~~Ad----VGiamgi~gtevak~aaDi---nf~s 793 (799)
. .....-| |-.+++ .+++. | +.+.|+||+.||..+.++|+ |++..|....+.....+|. ++..
T Consensus 125 ~---~~~~~KP--~p~~~~~~~~~l-gi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~e 198 (211)
T 2gmw_A 125 Q---VCDCRKP--HPGMLLSARDYL-HIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLAD 198 (211)
T ss_dssp S---CCSSSTT--SCHHHHHHHHHH-TBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGG
T ss_pred c---cCcCCCC--CHHHHHHHHHHc-CCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHH
Confidence 0 0000111 122222 23322 3 56889999999999999999 5555563334444455776 7777
Q ss_pred HHHhh
Q 003740 794 RKTYI 798 (799)
Q Consensus 794 i~~~i 798 (799)
+.+.+
T Consensus 199 l~~~l 203 (211)
T 2gmw_A 199 LPQAI 203 (211)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.59 E-value=9.9e-05 Score=73.32 Aligned_cols=115 Identities=17% Similarity=0.126 Sum_probs=83.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++ |+++.++|+.+...+..+-+.+|+...-+.+ +.+...+.-|-
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i----------------------~~~~~~~Kp~p 140 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGI----------------------YGSSPEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEE----------------------EEECSSCCSHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeee----------------------ecCCCCCCCCh
Confidence 457999999999999 9999999999988888899999986421111 22221233455
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe---eeecCCCCC-HHHH-HhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGT-EVEL-ECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV---Giamgi~gt-evak-~aaDi---nf~si~~~i 798 (799)
.+.+.+.+++| +.+.|+||+.||..|.++|++ ++++| .+. +..+ ..+|. ++..+.+.+
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~~~~el~~~l 209 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 66665554446 468999999999999999999 88888 553 3333 35776 777776654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0001 Score=74.71 Aligned_cols=116 Identities=13% Similarity=0.161 Sum_probs=82.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++. +++.++|+........+.+.+|+. -+.++.+++.. ... -|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~------------------~~k--p~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINR------------------KYK--PDP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHT------------------CCT--TSH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCC------------------CCC--CCH
Confidence 5578999999999997 999999999999999999999985 22233332211 111 223
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCC----CCC----HH-HHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI----AGT----EV-ELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi----~gt----ev-ak~aaDi---nf~si~~~i 798 (799)
..++.+.+++| +.+.++||+.||..|.+.|+++++|.. .|. +. .+..+|. ++..+.+.+
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l 246 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQL 246 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHh
Confidence 45554444435 578999999999999999999999984 121 11 3556676 777776654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.52 E-value=8.5e-05 Score=75.62 Aligned_cols=116 Identities=10% Similarity=0.056 Sum_probs=82.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++. +++.++|+........+.+.+|+. -+.++.+++.. ...-|.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~--------------------~~kp~~ 176 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFG--------------------HYKPDP 176 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHT--------------------CCTTSH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccc--------------------cCCCCH
Confidence 4568999999999985 999999999999999999999985 22333332211 122334
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCC----CCC---H-H-HHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI----AGT---E-V-ELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi----~gt---e-v-ak~aaDi---nf~si~~~i 798 (799)
..++.+.+++| +.++|+||+.||..|.+.|+++++|.. .|. + + .+..+|. ++..+...+
T Consensus 177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 44444433335 578999999999999999999999984 132 1 1 2566777 888877654
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.51 E-value=6.6e-05 Score=76.88 Aligned_cols=97 Identities=12% Similarity=0.079 Sum_probs=70.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+...-+.++.+++.. .+.-|.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------------------~~Kp~~ 150 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR--------------------VFKPHP 150 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT--------------------CCTTSH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccC--------------------CCCCCH
Confidence 56799999999999 99999999999999999999999865433343333321 011222
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~g 779 (799)
...+.+.+++| +.+.|+||+.||..|.+.|+++.+|. +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~-~~ 192 (253)
T 1qq5_A 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV-AR 192 (253)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEE-CC
T ss_pred HHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEE-CC
Confidence 33333322224 56889999999999999999999987 44
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.48 E-value=9.2e-05 Score=77.01 Aligned_cols=111 Identities=14% Similarity=0.027 Sum_probs=73.3
Q ss_pred CcccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 661 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 661 ~R~~v~~aI~~l~~a-GI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
+.|++.+.++.|++. |+++.++|+.....+..+.+.+|+.. -..++.+++...- .-.|+--.
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f~~i~~~~~~~~~----------------kp~~~~~~ 177 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-PEYFITANDVKQG----------------KPHPEPYL 177 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-CSSEECGGGCSSC----------------TTSSHHHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-cCEEEEcccCCCC----------------CCChHHHH
Confidence 468999999999999 99999999999999999999999852 2334444432100 01122122
Q ss_pred HHHHHHHH-------hCCCEEEEEcCCccCHHhhhcCCeeeec---CCCCCHHHHHhcCC
Q 003740 740 TLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVELECCCF 789 (799)
Q Consensus 740 ~lV~~Lq~-------~~G~vVa~~GDG~NDapAL~~AdVGiam---gi~gtevak~aaDi 789 (799)
.+.+.+.- . .+.+.++||+.||..|++.|+++++| |.+..+..+..||.
T Consensus 178 ~~~~~lgi~~~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~ 236 (275)
T 2qlt_A 178 KGRNGLGFPINEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDI 236 (275)
T ss_dssp HHHHHTTCCCCSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSE
T ss_pred HHHHHcCCCccccCCC-cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCE
Confidence 23333322 2 24589999999999999999965554 62323333334776
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00011 Score=72.03 Aligned_cols=104 Identities=9% Similarity=0.018 Sum_probs=71.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.| ++.++|+.+......+.+.+|+...-+.++.+.+.. ...-.|+--.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 148 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALG----------------VMKPNPAMYR 148 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHS----------------CCTTCHHHHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccC----------------CCCCCHHHHH
Confidence 36799999999999999 999999999999999999999865433333333211 0011121112
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCH
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gte 781 (799)
.+.+.+.-. .+.+.|+||+.||..|.+.|++...+-..+..
T Consensus 149 ~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 149 LGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred HHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence 222333222 25689999999999999999999887634433
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.40 E-value=8.2e-05 Score=75.89 Aligned_cols=47 Identities=19% Similarity=0.406 Sum_probs=42.4
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcC--CeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA--DIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~A--dVGiamgi~gtevak~aaDi 789 (799)
.+|..-++.|.+.+| |+++||+.||.+||+.| ++||||| ++ |+.||.
T Consensus 159 ~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~ 207 (239)
T 1u02_A 159 VNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVG-EG----ETHAKF 207 (239)
T ss_dssp CCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEES-SS----CCCCSE
T ss_pred CCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEEC-CC----CCcceE
Confidence 489999999998878 89999999999999999 9999999 87 566665
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.33 E-value=8.6e-05 Score=76.63 Aligned_cols=121 Identities=10% Similarity=0.120 Sum_probs=79.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.++++.|++.|+++.++|+.... ...+-+.+|+...-..++.+.+... ..-.|.--.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 168 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGW----------------PKPDPRIFQ 168 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHSS----------------CTTSHHHHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccCC----------------CCCCHHHHH
Confidence 35799999999999999999999997664 6888899998654333333332110 011122222
Q ss_pred HHHHHHHHhCCCEEEEEcCCc-cCHHhhhcCCeeeecCCCCCHH-----HHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGTEV-----ELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~-NDapAL~~AdVGiamgi~gtev-----ak~aaDi---nf~si~~~i 798 (799)
.+.+.+.-. .+.+.|+||+. ||..|.++|+++.+|...+... ....+|. ++..+.+.|
T Consensus 169 ~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 169 EALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 233333222 36789999997 9999999999999998544322 1125666 676666544
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00036 Score=67.91 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=24.2
Q ss_pred HHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCC
Q 003740 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (799)
Q Consensus 613 ~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~ 660 (799)
...+..+..+|..++.+| .|..++|+|++.|+
T Consensus 154 ~~~~~~~~~~G~T~V~va----------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 154 NDFMTEHERKGRTAVLVA----------------VDDELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHTTCEEEEEE----------------ETTEEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEcC
Confidence 344566677888788777 45679999999996
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.32 E-value=6.9e-05 Score=74.09 Aligned_cols=102 Identities=7% Similarity=-0.011 Sum_probs=69.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH------cCCccCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE------CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~------~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+...-+.++.+.+.. ..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~------------------~~ 149 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMG------------------KY 149 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHT------------------CC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccC------------------CC
Confidence 457999999999999 999999999998888888777 67754323333322211 11
Q ss_pred Ccc--cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCH
Q 003740 734 SPM--DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (799)
Q Consensus 734 sP~--dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gte 781 (799)
.|. --..+.+.+.-. .+.+.++||+.||..|.+.|+++.+|...+.+
T Consensus 150 Kp~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~ 198 (211)
T 2i6x_A 150 KPNEDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCPDNGEN 198 (211)
T ss_dssp TTSHHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred CCCHHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEECCHHH
Confidence 121 112222332212 25689999999999999999999999844443
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00031 Score=70.41 Aligned_cols=119 Identities=13% Similarity=0.149 Sum_probs=79.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++ |+++.++|+........+.+.++- .-+.++.+.++.. ..-.|.-..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~--~fd~i~~~~~~~~----------------~KP~~~~~~ 159 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV--EFDHIITAQDVGS----------------YKPNPNNFT 159 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS--CCSEEEEHHHHTS----------------CTTSHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC--ccCEEEEccccCC----------------CCCCHHHHH
Confidence 568999999999999 899999999998887777666442 2233333333211 111233223
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCeeeecCCCC----------CHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAG----------TEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdVGiamgi~g----------tevak~aaDi---nf~si~~~i 798 (799)
..++.+++. | +.+.|+||+. ||..|.++|+++.+|...+ .+..+..+|. ++..+.+.+
T Consensus 160 ~~l~~~~~l-gi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 160 YMIDALAKA-GIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHT-TCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHhc-CCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 443334433 4 5789999996 9999999999999995222 1334467777 777766554
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0014 Score=64.83 Aligned_cols=117 Identities=19% Similarity=0.216 Sum_probs=81.5
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+.|++.+.++.|++.|+++.++|+-+...+..+-+.+|+...-+.++.+.+.. ..-| +..-
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~------------------~~KP-~p~~ 145 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVK------------------NGKP-DPEI 145 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSS------------------SCTT-STHH
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccC------------------CCcc-cHHH
Confidence 46899999999999999999999999999999999999976544444444322 1122 2223
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee----eecCCCCCHHHHHhcC-C--ChHhHHHh
Q 003740 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG----LAMGIAGTEVELECCC-F--NFSSRKTY 797 (799)
Q Consensus 741 lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG----iamgi~gtevak~aaD-i--nf~si~~~ 797 (799)
+-+.+++. | +.+.|+||..+|..+-++|++. +.-|.+..+.-+++.+ . +...+++.
T Consensus 146 ~~~a~~~l-g~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~ 211 (216)
T 3kbb_A 146 YLLVLERL-NVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNV 211 (216)
T ss_dssp HHHHHHHH-TCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHH
T ss_pred HHHHHHhh-CCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHH
Confidence 33344433 4 5689999999999999999974 4445444455555433 3 66555554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00038 Score=73.60 Aligned_cols=54 Identities=24% Similarity=0.234 Sum_probs=48.5
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..+|...++.+.+.+| +.|+++||+.||.+|++.|++|++|| ++.+..|+.||.
T Consensus 222 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~ 278 (301)
T 2b30_A 222 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKC 278 (301)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSE
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCE
Confidence 3589999999987755 46899999999999999999999999 999999999987
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.05 E-value=9.8e-05 Score=67.46 Aligned_cols=94 Identities=13% Similarity=0.081 Sum_probs=65.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+.+.. ...|. .
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------------------~~Kp~-~ 77 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELG------------------VEKPE-E 77 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHS------------------CCTTS-H
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCC------------------CCCCC-H
Confidence 3467999999999999999999999999888888888888864333333322211 01121 1
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
..+-+.+++. | +.+.|+||+.+|..+.++|++-
T Consensus 78 ~~~~~~~~~~-~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 78 AAFQAAADAI-DLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHHHT-TCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHc-CCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 1222233333 4 4688999999999999999974
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.00 E-value=8e-05 Score=73.23 Aligned_cols=104 Identities=13% Similarity=0.081 Sum_probs=65.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcc--
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~-~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-- 736 (799)
++.|++.+.++.|++.|+++.++|+........+... .|+...-+.++.+.+.. ...|.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~------------------~~Kp~~~ 152 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLG------------------MRKPEAR 152 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHT------------------CCTTCHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccC------------------CCCCCHH
Confidence 4579999999999999999999999765554433333 34322111222222110 11222
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHH
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtev 782 (799)
--..+.+.+.-. .+.+.|+||+.||..+.+.|++...+...+.++
T Consensus 153 ~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~ 197 (206)
T 2b0c_A 153 IYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTI 197 (206)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred HHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence 222333333222 356899999999999999999998887455543
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00027 Score=70.73 Aligned_cols=103 Identities=20% Similarity=0.220 Sum_probs=64.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeec--chhhhccCHHHHh
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIE--GPEFREKSDEELS 721 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~aiA~~~GI~~~~~~~~~--g~~~~~~~~~~~~ 721 (799)
.++.|++.++++.|++.|+++.++|+... ..+..+.+++|+.-. ..... +.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~~~~-g~~~----- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD-MVLACAYHEA-GVGP----- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCCTT-CCST-----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee-eEEEeecCCC-Ccee-----
Confidence 56789999999999999999999999887 677888889997411 00000 000 0000
Q ss_pred hhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 722 KLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 722 ~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
+.... + ..+.-|-.+.+.+.+++| +.++|+||+.||..+.+.|++..
T Consensus 128 ~~~~~--~---~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 LAIPD--H---PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TCCSS--C---TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ecccC--C---ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00000 0 001112233333333324 46899999999999999999653
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0011 Score=67.29 Aligned_cols=94 Identities=14% Similarity=0.113 Sum_probs=68.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+..... . +++...| +.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------~--i~~~~kp--~~ 165 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP---------------------R--IEVVSEK--DP 165 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC---------------------C--EEEESCC--SH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc---------------------e--eeeeCCC--CH
Confidence 45799999999999 999999999999998899999999854211 1 3333333 23
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCeeeecCCCC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAG 779 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdVGiamgi~g 779 (799)
..++.+.+++| +.++++||+. ||..|.+.|++++++=..|
T Consensus 166 ~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~ 209 (251)
T 2pke_A 166 QTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYA 209 (251)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCC
Confidence 33333322224 5789999999 9999999999997764343
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00071 Score=69.21 Aligned_cols=50 Identities=22% Similarity=0.218 Sum_probs=37.9
Q ss_pred cHHHHHHHHHHhCCCEEEEEcC----CccCHHhhhcCC-eeeecCCCCCHHHHHhcC
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVELECCC 788 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GD----G~NDapAL~~Ad-VGiamgi~gtevak~aaD 788 (799)
+|..-++.|.+. -+-|+++|| |.||.+||+.|. +|++|+ ++.|..|..++
T Consensus 187 ~Kg~al~~L~~~-~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~ 241 (246)
T 3f9r_A 187 DKTYCLQFVEDD-FEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEK 241 (246)
T ss_dssp SGGGGGGGTTTT-CSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHH
T ss_pred CHHHHHHHHHcC-cccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHH
Confidence 444444444432 466899999 799999999996 899999 99988886553
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00094 Score=65.13 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=67.2
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~---~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
-++.||+.++++.|+++|+++.++|+-.. ..+..+.+.+|+...-+.++...+... ......|
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~--------------~~~~~KP 98 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQ--------------PGKMEKP 98 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSS--------------TTCCCTT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccc--------------ccCCCCc
Confidence 36889999999999999999999998776 889999999999643222222221100 0000011
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCC-ccCHHhhhcCCeeee
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLA 774 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG-~NDapAL~~AdVGia 774 (799)
+..-+-+.+++. | ..+.|+||. .+|..+-++|++...
T Consensus 99 -~p~~~~~~~~~~-~~~~~~~l~VGD~~~~Di~~A~~aG~~~i 139 (189)
T 3ib6_A 99 -DKTIFDFTLNAL-QIDKTEAVMVGNTFESDIIGANRAGIHAI 139 (189)
T ss_dssp -SHHHHHHHHHHH-TCCGGGEEEEESBTTTTHHHHHHTTCEEE
T ss_pred -CHHHHHHHHHHc-CCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 222233333333 4 578999999 799999999998543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0013 Score=67.37 Aligned_cols=85 Identities=18% Similarity=0.146 Sum_probs=66.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~----~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
.+++.|++.+.++.|++.|+++.++||-.. ..+..-.+++||..-.. + .++-|.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~-----~-----------------~Lilr~ 156 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE-----S-----------------AFYLKK 156 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG-----G-----------------GEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc-----c-----------------ceeccC
Confidence 467789999999999999999999998854 46677778899964110 0 044454
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHh
Q 003740 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapA 765 (799)
.-.+|....+.+.+. | .+|+++||-.+|.++
T Consensus 157 ~~~~K~~~r~~l~~~-Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 157 DKSAKAARFAEIEKQ-GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SCSCCHHHHHHHHHT-TEEEEEEEESSGGGGCS
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHhcc
Confidence 457788888888877 5 589999999999886
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0017 Score=66.41 Aligned_cols=85 Identities=20% Similarity=0.255 Sum_probs=67.1
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~----~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
..++.|++.+.++.|++.|+++.++||-.. ..+..-.+++||..... . .++-|.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~---------------------~-~Lilr~ 156 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND---------------------K-TLLLKK 156 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST---------------------T-TEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc---------------------c-eeEecC
Confidence 357789999999999999999999999865 47777778899964110 0 044454
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHh
Q 003740 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapA 765 (799)
...+|....+.|.+. | .+|+++||-.+|.++
T Consensus 157 ~~~~K~~~r~~L~~~-gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 157 DKSNKSVRFKQVEDM-GYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SCSSSHHHHHHHHTT-TCEEEEEEESSGGGGCG
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHcCc
Confidence 567899999999885 4 689999999999987
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00062 Score=68.28 Aligned_cols=103 Identities=14% Similarity=0.046 Sum_probs=67.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH------HHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA------RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA------~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
++.|++.++++.|++. +++.++|+.+...+..+. +..|+...-+.++.+.+.. ...-
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~----------------~~KP 174 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMK----------------MAKP 174 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHT----------------CCTT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccC----------------CCCC
Confidence 4569999999999999 999999999999888776 4456543222222222211 0011
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCC
Q 003740 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gt 780 (799)
.|+-=..+.+.+.-. .+.+.|+||+.||..+.++|+++.++...+.
T Consensus 175 ~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 175 EPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 111112223333222 3678999999999999999999999884443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0024 Score=65.64 Aligned_cols=44 Identities=16% Similarity=0.103 Sum_probs=36.5
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTG---D~~~tA~aiA~~~GI~~ 701 (799)
.+.+-|+++++|++++++|++++++|| ..........+++|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 344568899999999999999999999 67777777778888853
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0018 Score=70.47 Aligned_cols=129 Identities=15% Similarity=0.192 Sum_probs=81.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
++.||+.+.++.|+++|+++.++|+-....+..+-+..|+...-+ .++.+++...- .+.++...- +.-|.-
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-----~~~~~~~kp--~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-----ENMYPQARP--LGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-----HHHSTTSCC--CCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc-----ccccccccC--CCCCCH
Confidence 678999999999999999999999999999999999999975433 45555443210 000111000 011221
Q ss_pred HHHHHHHHHHhCC-----------------CEEEEEcCCccCHHhhhcCCee-eecCCCCC-------HHHHHhcCC---
Q 003740 738 KHTLVKHLRTTLG-----------------EVVAVTGDGTNDAPALHEADIG-LAMGIAGT-------EVELECCCF--- 789 (799)
Q Consensus 738 K~~lV~~Lq~~~G-----------------~vVa~~GDG~NDapAL~~AdVG-iamgi~gt-------evak~aaDi--- 789 (799)
.-+...+++. | +.+.|+||+.+|..|-++|++. |.+. .|. +.....+|.
T Consensus 288 -~~~~~a~~~l-g~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~ 364 (384)
T 1qyi_A 288 -FSYIAALYGN-NRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVIN 364 (384)
T ss_dssp -HHHHHHHHCC-CGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEES
T ss_pred -HHHHHHHHHc-CCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEEC
Confidence 1122333322 3 5689999999999999999964 3333 332 222335776
Q ss_pred ChHhHHHhh
Q 003740 790 NFSSRKTYI 798 (799)
Q Consensus 790 nf~si~~~i 798 (799)
++..+...+
T Consensus 365 sl~eL~~~l 373 (384)
T 1qyi_A 365 HLGELRGVL 373 (384)
T ss_dssp SGGGHHHHH
T ss_pred CHHHHHHHH
Confidence 777766554
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0018 Score=64.46 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=70.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.++++.|++. +++.++|+.... -+.+|+...-+.++.+++.. . ..-|.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~------------------~--~kp~~ 158 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLG------------------I--GKPDP 158 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHT------------------C--CTTSH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccC------------------C--CCcCH
Confidence 3578999999999998 999999987754 34556643222222222211 0 11123
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCeeeec---CCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdVGiam---gi~gtevak~aaDi---nf~si~~~i 798 (799)
.+++.+.+++| +.+.|+||+. ||..|.+.|+++.++ |....+. +..+|. ++..+.+.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 159 APFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESSGGGHHHHH
T ss_pred HHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECCHHHHHHHH
Confidence 33333333324 5689999998 999999999998877 2132222 556676 777776654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0029 Score=65.07 Aligned_cols=116 Identities=13% Similarity=0.138 Sum_probs=76.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++ ++++.++|+.....+..+.+.+|+...-+.++.+.+.. ..-| +..
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~------------------~~KP-~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK------------------EEKP-APS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS------------------SCTT-CHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCC------------------CCCC-CHH
Confidence 567999999999998 69999999999999999999999975433333333311 1112 112
Q ss_pred HHHHHHHHhCC---CEEEEEcC-CccCHHhhhcCCe--eeecCCCCCHH---HHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLG---EVVAVTGD-GTNDAPALHEADI--GLAMGIAGTEV---ELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GD-G~NDapAL~~AdV--Giamgi~gtev---ak~aaDi---nf~si~~~ 797 (799)
-+-+.+++. | +.+.|+|| ..||..+-++|++ .+.++ .+... ....+|. ++..+.+.
T Consensus 181 ~~~~~~~~~-~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~-~~~~~~~~~~~~~~~~i~~~~el~~~ 248 (260)
T 2gfh_A 181 IFYHCCDLL-GVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN-KSGRVPLTSSPMPHYMVSSVLELPAL 248 (260)
T ss_dssp HHHHHHHHH-TCCGGGEEEEESCTTTHHHHHHHTTCSEEEEEC-TTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred HHHHHHHHc-CCChhhEEEECCCchhhHHHHHHCCCceEEEEc-CCCCCcCcccCCCCEEECCHHHHHHH
Confidence 223333333 4 57899999 5999999999999 67776 33211 1233554 66665543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0024 Score=65.84 Aligned_cols=52 Identities=17% Similarity=0.274 Sum_probs=45.2
Q ss_pred ccHHHHHHHHHHh-CCCEEEEEcC----CccCHHhhhcCC-eeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTT-LGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~-~G~vVa~~GD----G~NDapAL~~Ad-VGiamgi~gtevak~aaDi 789 (799)
.+|..-++.| .. ..+-|+++|| |.||.+||+.|+ +|++|| ++.+..|+.||+
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~ 253 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREI 253 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHH
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhhe
Confidence 5799999999 21 1267999999 999999999999 699999 999999999886
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.013 Score=57.31 Aligned_cols=87 Identities=14% Similarity=0.156 Sum_probs=58.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|+++|+++.++||.....+..+.. .. .+.++.+.+. .+..| +..
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~--~d~v~~~~~~------------------~~~KP-~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV--NDWMIAAPRP------------------TAGWP-QPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT--TTTCEECCCC------------------SSCTT-STH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc--CCEEEECCcC------------------CCCCC-ChH
Confidence 567999999999999999999999998887755443 11 1112222110 01122 223
Q ss_pred HHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCe
Q 003740 740 TLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdV 771 (799)
-+.+.+++. | +.+.|+||..+|..+-++|++
T Consensus 92 ~~~~a~~~l-~~~~~~~~v~VGDs~~Di~aA~~aG~ 126 (196)
T 2oda_A 92 ACWMALMAL-NVSQLEGCVLISGDPRLLQSGLNAGL 126 (196)
T ss_dssp HHHHHHHHT-TCSCSTTCEEEESCHHHHHHHHHHTC
T ss_pred HHHHHHHHc-CCCCCccEEEEeCCHHHHHHHHHCCC
Confidence 445555544 4 458899999999999999996
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0086 Score=61.42 Aligned_cols=43 Identities=14% Similarity=0.037 Sum_probs=36.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTG---D~~~tA~aiA~~~GI~~ 701 (799)
+.+-|+++++|++++++|++++++|| ..........+++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34557899999999999999999988 67777777788888853
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0062 Score=60.49 Aligned_cols=94 Identities=13% Similarity=0.045 Sum_probs=61.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+... .+..+.+.+|+...-+.++.+.+. ....|.- .
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~------------------~~~Kp~~-~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEI------------------KAVKPNP-K 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------------------------C-C
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEecccc------------------CCCCCCH-H
Confidence 4579999999999999999999999866 478888999986433333333321 1112211 1
Q ss_pred HHHHHHHHhCCCEEEEEcCCcc-CHHhhhcCCeeee
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTN-DAPALHEADIGLA 774 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~N-DapAL~~AdVGia 774 (799)
-+-+.+++. |-.-.|+||+.+ |..+-++|++...
T Consensus 155 ~~~~~~~~~-~~~~~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 155 IFGFALAKV-GYPAVHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp HHHHHHHHH-CSSEEEEESSCCCCCCCSSSCSEEEE
T ss_pred HHHHHHHHc-CCCeEEEcCCchHhHHHHHHCCCeEE
Confidence 222333333 422299999999 9999999998654
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.019 Score=54.60 Aligned_cols=30 Identities=13% Similarity=0.252 Sum_probs=22.3
Q ss_pred HHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccC
Q 003740 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659 (799)
Q Consensus 614 ~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D 659 (799)
..+..+..+|..++.+| .|..++|+|++.|
T Consensus 136 ~~~~~~~~~G~T~v~va----------------~dg~~~g~i~l~D 165 (165)
T 2arf_A 136 DAMTDHEMKGQTAILVA----------------IDGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHTTTSEEEEEE----------------ETTEEEEEEEECC
T ss_pred HHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEC
Confidence 34456667788778777 4567899999987
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0026 Score=64.76 Aligned_cols=52 Identities=21% Similarity=0.332 Sum_probs=42.5
Q ss_pred ccHHHHHHHHHHh-CCCEEEEEcC----CccCHHhhhcCCe-eeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTT-LGEVVAVTGD----GTNDAPALHEADI-GLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~-~G~vVa~~GD----G~NDapAL~~AdV-Giamgi~gtevak~aaDi 789 (799)
.+|..-++.| -. -.+-|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+
T Consensus 187 ~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~ 244 (246)
T 2amy_A 187 WDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELL 244 (246)
T ss_dssp CSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHH
T ss_pred CchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhh
Confidence 4788888888 21 1268999999 9999999999987 99999 999999999874
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.035 Score=56.86 Aligned_cols=43 Identities=16% Similarity=0.153 Sum_probs=37.8
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~aiA~~~GI~~ 701 (799)
.++-|++.++++.|++.|++++++| |..........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5567899999999999999999999 888888888888898853
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.01 Score=63.15 Aligned_cols=125 Identities=14% Similarity=0.155 Sum_probs=77.7
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc----CCccCCcee----ecc-hhhhccC-HHHHh------
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC----GILTDNGIA----IEG-PEFREKS-DEELS------ 721 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~----GI~~~~~~~----~~g-~~~~~~~-~~~~~------ 721 (799)
...+.|++++.++.|+++|++|++|||-+...++.+|..+ ||..++-+- +.. ..-.... ..+..
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccc
Confidence 3356899999999999999999999999999999999985 675442111 100 0000000 01111
Q ss_pred hhcCCceEEEec-----CcccHHHHHHHHHHhCCCEEEEEcCC-ccCHHhhhc--CCeeeecCCCCCHH
Q 003740 722 KLIPKIQVMARS-----SPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHE--ADIGLAMGIAGTEV 782 (799)
Q Consensus 722 ~~~~~~~v~ar~-----sP~dK~~lV~~Lq~~~G~vVa~~GDG-~NDapAL~~--AdVGiamgi~gtev 782 (799)
...++..+..+. --+.|..-|+........-+++.||+ ..|.+||.. ++.|+.+-++-.+-
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~~ 289 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAK 289 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCHH
T ss_pred cccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEecCCc
Confidence 111222222222 12568887777654413578999999 579999954 56677666555443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.47 E-value=0.0063 Score=63.91 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=66.2
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHH---HHHHHH--------cCCccCCceeecchhhhccCHHHHhhhcC
Q 003740 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTA---KAIARE--------CGILTDNGIAIEGPEFREKSDEELSKLIP 725 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA---~aiA~~--------~GI~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (799)
.++++.||+.++++.|++.|+++.++||-....+ ...-+. .|+. ...++.+.+..
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~------------ 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQCQREQGD------------ 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEEECCTTC------------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chheeeccCCC------------
Confidence 4678899999999999999999999999885432 333344 6882 22222222210
Q ss_pred CceEEEecCcccHHHHHHHHHHhCC-CEEEEEcCCccCHHhhhcCCee
Q 003740 726 KIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 726 ~~~v~ar~sP~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdVG 772 (799)
.+-.|+-|..+.+.+... . +.+.|+||..+|..|-++|++-
T Consensus 251 -----~kp~p~~~~~~~~~~~~~-~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 251 -----TRKDDVVKEEIFWKHIAP-HFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp -----CSCHHHHHHHHHHHHTTT-TCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -----CcHHHHHHHHHHHHHhcc-ccceEEEeCCcHHHHHHHHHcCCe
Confidence 122355667777776433 3 3468999999999999999874
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.014 Score=59.41 Aligned_cols=105 Identities=11% Similarity=0.227 Sum_probs=71.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+...-+.++.+++.. +.-|. ..
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~------------------~~KP~-p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCK------------------NNKPH-PE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCC------------------SCTTS-SH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccC------------------CCCCc-HH
Confidence 567999999999999999998877653 4567788899976555565555432 12222 12
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe-eeecCCCCCHHHHHhcCC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVELECCCF 789 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV-Giamgi~gtevak~aaDi 789 (799)
-+.+.+++. | +.+.|+||..+|..|-++|++ .|.++ +..+. ..||+
T Consensus 175 ~~~~a~~~l-g~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~~--~~ad~ 224 (250)
T 4gib_A 175 IFLMSAKGL-NVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYENL--KKANL 224 (250)
T ss_dssp HHHHHHHHH-TCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTTT--TTSSE
T ss_pred HHHHHHHHh-CCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhHh--ccCCE
Confidence 233333333 3 568999999999999999997 55555 33332 34676
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.023 Score=58.27 Aligned_cols=84 Identities=15% Similarity=0.280 Sum_probs=54.9
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCc--cCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~---~~tA~aiA~~~GI~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
.++.|++.++++.|++.|+++.++||-. .......-+.+||. .....++.+++
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~---------------------- 157 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPK---------------------- 157 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTT----------------------
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCC----------------------
Confidence 3567999999999999999999999987 34445555778986 33333333332
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHhh
Q 003740 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL 766 (799)
+ .|......+.+.--.+++|+||..||..+-
T Consensus 158 -~-~K~~~~~~~~~~~~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 158 -E-KGKEKRRELVSQTHDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp -C-CSSHHHHHHHHHHEEEEEEEESSGGGSTTC
T ss_pred -C-CCcHHHHHHHHhCCCceEEeCCCHHHhccc
Confidence 0 111112222222024688999999998875
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.034 Score=55.47 Aligned_cols=113 Identities=8% Similarity=0.044 Sum_probs=72.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.| ++.++|+-....+..+.+.+|+... +..+ +.. ...|.
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~---------------------f~~~-~~~---~~~K~ 149 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE---------------------VEGR-VLI---YIHKE 149 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH---------------------TTTC-EEE---ESSGG
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh---------------------cCee-EEe---cCChH
Confidence 57899999999999999 9999999999999999999998521 1111 111 12343
Q ss_pred HHHHHHHHh-CCCEEEEEcCCcc---CHHhhhcCCe---eeecCCC-CC-HHHHHh--cCC---ChHhHHHhh
Q 003740 740 TLVKHLRTT-LGEVVAVTGDGTN---DAPALHEADI---GLAMGIA-GT-EVELEC--CCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~-~G~vVa~~GDG~N---DapAL~~AdV---Giamgi~-gt-evak~a--aDi---nf~si~~~i 798 (799)
.+++.+.+. ..+.+.|+||+.| |..+-+.|++ ++.-|.. .. +..++. +|. ++..+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l 222 (231)
T 2p11_A 150 LMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMD 222 (231)
T ss_dssp GCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCG
T ss_pred HHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHH
Confidence 444444332 1467999999999 6556667774 3333311 02 223332 676 777665543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.93 E-value=0.014 Score=58.36 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=30.7
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCC-ccCHHhhhcCCee---eecC
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIG---LAMG 776 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG-~NDapAL~~AdVG---iamg 776 (799)
.|...++.+.+++| +.++|+||+ .||..|++.|+++ +++|
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g 223 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 223 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSS
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCC
Confidence 35566666655545 579999999 6999999999988 5566
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.87 E-value=0.0097 Score=57.19 Aligned_cols=97 Identities=20% Similarity=0.178 Sum_probs=62.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceee-cc----hhhhccCHH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAI-EG----PEFREKSDE 718 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~aiA~~~GI~~~~~~~~-~g----~~~~~~~~~ 718 (799)
-++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+. -..++ .+ .+..
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~----- 113 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECD----- 113 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCS-----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCccccc-----
Confidence 357899999999999999999999997 466788888999985 12221 21 1100
Q ss_pred HHhhhcCCceEEEecCcccH--HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee-eecC
Q 003740 719 ELSKLIPKIQVMARSSPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMG 776 (799)
Q Consensus 719 ~~~~~~~~~~v~ar~sP~dK--~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG-iamg 776 (799)
..-|.-. ..+.+.+.-. .+.+.||||..+|..+-++|++- |.+.
T Consensus 114 -------------~~KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 114 -------------CRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp -------------SSTTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred -------------ccCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 0111110 0111222212 24588999999999999999985 4444
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.19 Score=50.70 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=36.2
Q ss_pred CcccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003740 661 MRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~aiA~~~GI~~ 701 (799)
+-++..++++.+++.|+++.++| |..........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 55788999999999999999999 999988888888888753
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.50 E-value=0.036 Score=56.79 Aligned_cols=92 Identities=20% Similarity=0.197 Sum_probs=64.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc---CCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~---GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
-++.||+.++++.|+++|+++.++|+-+...+..+-+.+ |+...-+.++.+ + +. .-|
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~-----------------~~--~KP 188 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-K-----------------IG--HKV 188 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-G-----------------GC--CTT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-C-----------------CC--CCC
Confidence 367899999999999999999999999988888776644 465432233322 2 11 122
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
. ..-+-+.+++. | +.+.|+||..+|..+-++|++-
T Consensus 189 ~-p~~~~~~~~~l-g~~p~~~l~VgDs~~di~aA~~aG~~ 226 (261)
T 1yns_A 189 E-SESYRKIADSI-GCSTNNILFLTDVTREASAAEEADVH 226 (261)
T ss_dssp C-HHHHHHHHHHH-TSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred C-HHHHHHHHHHh-CcCcccEEEEcCCHHHHHHHHHCCCE
Confidence 1 22333334333 3 5789999999999999999974
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.39 E-value=0.026 Score=57.07 Aligned_cols=90 Identities=14% Similarity=0.202 Sum_probs=65.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+.. .+..+-+.+|+....+.++.+.+.. +.-|. ..
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~~~~~~~------------------~~KP~-p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCADASQLK------------------NSKPD-PE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEECCGGGCS------------------SCTTS-TH
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhcccccccccccccc------------------CCCCc-HH
Confidence 457999999999999999999999764 3566778899976555555555532 12222 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV 771 (799)
-+..++++. | +.+.|+||..+|..|-++|++
T Consensus 154 ~~~~a~~~l-g~~p~e~l~VgDs~~di~aA~~aG~ 187 (243)
T 4g9b_A 154 IFLAACAGL-GVPPQACIGIEDAQAGIDAINASGM 187 (243)
T ss_dssp HHHHHHHHH-TSCGGGEEEEESSHHHHHHHHHHTC
T ss_pred HHHHHHHHc-CCChHHEEEEcCCHHHHHHHHHcCC
Confidence 334444444 4 578999999999999999985
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=93.48 E-value=0.053 Score=55.47 Aligned_cols=43 Identities=19% Similarity=0.266 Sum_probs=37.5
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~aiA~~~GI~~ 701 (799)
..++ |+++++|++++++|++|+++| |..........+++|+..
T Consensus 20 ~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 20 KSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp TEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred CEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 3456 899999999999999999999 888888888888999854
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=92.26 E-value=0.015 Score=57.74 Aligned_cols=86 Identities=15% Similarity=0.191 Sum_probs=54.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeecchhhhccCHHHHhhhcCCceEEEec--C
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS--S 734 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~----~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~--s 734 (799)
+.|++.+.++.|+++|+++.++|+-....+..+.+. .+... .+.+ ...+... .
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~------~~~~---------------~~~~~~~KP~ 147 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA------TNMN---------------PVIFAGDKPG 147 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT------TTBC---------------CCEECCCCTT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc------cccc---------------hhhhcCCCCC
Confidence 467999999999999999999999865433333222 22210 0000 0011122 2
Q ss_pred cccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee
Q 003740 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
|+-. .+.+++. |- +.|+||..+|..+-+.|++-
T Consensus 148 p~~~---~~~~~~~-g~-~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 148 QNTK---SQWLQDK-NI-RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp CCCS---HHHHHHT-TE-EEEEESSHHHHHHHHHTTCE
T ss_pred HHHH---HHHHHHC-CC-EEEEECCHHHHHHHHHCCCe
Confidence 3333 3344444 65 99999999999999999974
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=91.29 E-value=0.83 Score=45.74 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=32.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~aiA~~~GI~~ 701 (799)
.++.-+++.++++.+++.|+++.++| |-........-+++|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 44555788999999999999999999 666655555556778754
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=90.76 E-value=0.38 Score=50.22 Aligned_cols=43 Identities=16% Similarity=0.089 Sum_probs=35.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGIL 700 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~aiA~~~GI~ 700 (799)
.+++-|++.++++.|++.|++++++| |..........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34566889999999999999999999 57777766677788875
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=88.36 E-value=0.011 Score=57.59 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=36.7
Q ss_pred CCCcccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCC
Q 003740 659 DPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI 699 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~a-GI~v~mlTGD~~~tA~aiA~~~GI 699 (799)
-++.||+.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 35789999999999999 999999999988888888888887
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=88.25 E-value=0.14 Score=57.65 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=60.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCC---CHHHHHHH-HHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGD---NINTAKAI-ARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD---~~~tA~ai-A~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
++.||+.++++.|+++|+++.++|+- .......+ ....|+...-+.++.+++.. +.-|
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~------------------~~KP 161 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG------------------MVKP 161 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT------------------CCTT
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccC------------------CCCC
Confidence 67899999999999999999999995 11111111 11125543333444444432 1122
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
. ..-+.+.+++. | +.+.|+||..||..+.++|++....-
T Consensus 162 ~-p~~~~~~~~~l-g~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 162 E-PQIYKFLLDTL-KASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp C-HHHHHHHHHHH-TCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred C-HHHHHHHHHHc-CCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 1 22333344433 4 56888899999999999999976553
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=85.84 E-value=0.7 Score=50.67 Aligned_cols=40 Identities=13% Similarity=0.260 Sum_probs=33.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCC------------HHHHHHHHHHcCCc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDN------------INTAKAIARECGIL 700 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~------------~~tA~aiA~~~GI~ 700 (799)
+-|++.++++.|+++|+++.++|+-. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999955 22377888889984
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.15 E-value=0.41 Score=45.93 Aligned_cols=90 Identities=13% Similarity=0.077 Sum_probs=64.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
.+|||+.+.++.|++. +++.+.|.-....|..+.+.+|....-..++.+++ ....|.
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~----------------------~~~~k~ 111 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRES----------------------CVFHRG 111 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGG----------------------SEEETT
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccC----------------------ceecCC
Confidence 4699999999999998 99999999999999999999998542122222222 111233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.+++.|+.. | +.|.++||..+|..+=.++.|-|
T Consensus 112 ~~~k~L~~L-g~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 112 NYVKDLSRL-GRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEECCGGGT-CSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cEeccHHHh-CCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 344555444 4 57999999999998766665544
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=85.10 E-value=6.4 Score=48.31 Aligned_cols=164 Identities=17% Similarity=0.123 Sum_probs=80.6
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccC----CCCCEEEccceeeeceEEEE
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN----ALNPFLLSGTKVQNGSCKML 319 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~----~~~~~v~sGt~v~~G~~~~~ 319 (799)
.-|....+...|.+|-|.+.++.++. -+|==.+.|++.-|.-+.-.....|.... .+. .+.+|+...-=..++.
T Consensus 196 v~GDiV~l~~Gd~VPAD~~ll~~~~l-~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT-~v~~G~~~~vVv~tG~ 273 (1034)
T 3ixz_A 196 VVGDLVEMKGGDRVPADIRILQAQGR-KVDNSSLTGESEPQTRSPECTHESPLETRNIAFFST-MCLEGTAQGLVVNTGD 273 (1034)
T ss_pred CCCcEEEEcCCceecCCeEEEEeCCc-eEEecccCCCCCCeeccCCCccccccccccceecce-eEEeecceEEEEeehh
Confidence 35778899999999999999986542 25666666766444433222122233322 333 4667764322122222
Q ss_pred EEEEcccchhHHHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHH
Q 003740 320 VTTVGMRTQWGKLMATLSEG-GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL 398 (799)
Q Consensus 320 V~~vG~~T~~g~i~~~~~~~-~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (799)
=|..|. +.+++...... ..-...+.+....++.....+++++.++.++. -..+.. .+.
T Consensus 274 ~T~~Gk---I~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~-----------------~~~ 332 (1034)
T 3ixz_A 274 RTIIGR---IASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI-GYTFLR-----------------AMV 332 (1034)
T ss_pred hhHhhH---HHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHH-----------------HHH
Confidence 333332 11222222111 11122334444555555444444433333222 111110 233
Q ss_pred HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Q 003740 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (799)
Q Consensus 399 ~~~~~av~ilvva~P~~Lplav~l~l~~~~~~ 430 (799)
.++..+++.+=.+.|..++++..++.....++
T Consensus 333 ~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~ 364 (1034)
T 3ixz_A 333 FFMAIVVAYVPEGLLATVTVCLSLTAKRLASK 364 (1034)
T ss_pred HHHHHHHheeccccHHHHHHHHHHHHHHHhhC
Confidence 44555666666777888888887776554433
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.66 E-value=0.4 Score=46.69 Aligned_cols=90 Identities=14% Similarity=0.070 Sum_probs=66.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
.+|||+.+.++.|++. +++.+.|.-....|..+.+.+|+...-..++.+++. ...|.
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~----------------------~~~k~ 124 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESC----------------------VFHRG 124 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGC----------------------EEETT
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccc----------------------eecCC
Confidence 5699999999999998 999999999999999999999986432223333221 11233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.+++.|+.. | +.|.+++|..++..+=++|.+-|
T Consensus 125 ~~lK~L~~L-g~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 125 NYVKDLSRL-GRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp EEECCGGGS-SSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred ceeeeHhHh-CCChhHEEEEECCHHHhhhCccCccEE
Confidence 345555443 4 56899999999998777776655
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=84.49 E-value=1 Score=41.34 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=35.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCcc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILT 701 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~---~~tA~aiA~~~GI~~ 701 (799)
+-|++.++|+.+++.|++++++||.+ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 34799999999999999999999997 566777788889853
|
| >3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 | Back alignment and structure |
|---|
Probab=84.12 E-value=0.039 Score=44.12 Aligned_cols=57 Identities=28% Similarity=0.268 Sum_probs=47.8
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChh
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPD 101 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 101 (799)
..|..+.|+.+.+.+++..++||+...++.+.|++. ..+...+..+++..||.+.+.
T Consensus 14 ~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~~~~~ 70 (74)
T 3dxs_X 14 AACSNSVEAALMNVNGVFKASVALLQNRADVVFDPN--LVKEEDIKEEIEDAGFEAEIL 70 (74)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTT--TCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCC--CCCHHHHHHHHHHCCCceEEc
Confidence 357778889999999999999999999999998765 456778888999999987654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 799 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 6e-35 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-32 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-25 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-20 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 9e-17 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-18 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 8e-15 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-12 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 8e-11 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 8e-09 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 134 bits (339), Expect = 6e-35
Identities = 37/369 (10%), Positives = 86/369 (23%), Gaps = 53/369 (14%)
Query: 433 NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 492
+ + L +G + I + + + ++I S G +
Sbjct: 22 SALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRN-RIFQKDKILNKLKSLGLNSNWDM 80
Query: 493 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 552
+ S L+ + + L A + + Q
Sbjct: 81 LFIVFSIHLI----------------DILKKLSHDEIEAFMYQDEPVELKLQNISTNLAD 124
Query: 553 VKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612
+ + V + + A+ + +++A + L
Sbjct: 125 CFNLNEQLPLQFLDNVKVGKNNIYAALEEFAT---------------TELHVSDATLFSL 169
Query: 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM--RPGVKESVA 670
+ A E + L + G + + + VK +
Sbjct: 170 KGALWTLAQEVYQEWYLGSKLYEDVE----KKIARTTFKTGYIYQEIILRPVDEVKVLLN 225
Query: 671 ICRSAGITVRMVTGDNINTAKAIARECGILT--DNGIAIEGPEFREKSDEELSKL----- 723
+ AG + + TG G+L + + E +
Sbjct: 226 DLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 724 ----IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMG 776
+ + + + V + GD D + + IG G
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTG 344
Query: 777 IAGTEVELE 785
+ G + E
Sbjct: 345 LKGKDAAGE 353
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 122 bits (306), Expect = 4e-32
Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 15/212 (7%)
Query: 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KT 521
MTV +I E D ++ + L + G+ N K
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 522 EILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVH 579
+ G +E+A+L+ L G + R + V FNS K + E +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 580 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI----- 634
KGA E IL C L G+ +PL++ + + R L + +
Sbjct: 122 MKGAPERILDRCSSIL-VQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 635 --GNEFSADAP-IPTEGYTCIGIVGIKDPMRP 663
G +F D PTE +G++ + D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 101 bits (251), Expect = 2e-25
Identities = 56/137 (40%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GI 705
T DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
A G EF + E + + AR P K +V++L++ A+TGDG NDAPA
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAPA 128
Query: 766 LHEADIGLAMGIAGTEV 782
L +A+IG+AMG +GT V
Sbjct: 129 LKKAEIGIAMG-SGTAV 144
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 94.0 bits (233), Expect = 1e-20
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 22/177 (12%)
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
D+TPLQ KL+ + K+ V + + + G F + G + +F
Sbjct: 130 DKTPLQQKLDEFGEQLSKVISLICVAVWLINI-GHFNDPVH-------GGSWIRGAIYYF 181
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK--TG 459
IAV + V A+PEGLP +T LA ++M A+VR L + ET+G A +
Sbjct: 182 KIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRY 241
Query: 460 TLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG 516
+++N V+ + A G +LL ++ + +G
Sbjct: 242 LISSNVGEVVCIFLT------------AALGLPEALIPVQLLWVNLVTDGLPATALG 286
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 81.6 bits (201), Expect = 9e-17
Identities = 35/166 (21%), Positives = 54/166 (32%), Gaps = 13/166 (7%)
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
E S T G++ + + R E YG N+ + W V E D+ + IL
Sbjct: 8 STEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
+ A +S V+ EG V ILL++ A Q E+
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQ---------ERNAEN 114
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLIN 285
A + + D P G+Q+ + LIN
Sbjct: 115 AIEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLIN 160
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 83.8 bits (206), Expect = 1e-18
Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 31/189 (16%)
Query: 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA------------- 545
+L N E +G TETA+ +
Sbjct: 52 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 111
Query: 546 ---ERQASKIVKVEPFNSVKKQMGVVIELPEGG-----FRVHCKGASEIILAACDKFLNS 597
RQ K F+ +K M V + ++ KGA E ++ C+
Sbjct: 112 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV- 170
Query: 598 NGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY------ 649
VP+ + I+++ + LR L LA + + + +
Sbjct: 171 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 230
Query: 650 -TCIGIVGI 657
T +G+VG+
Sbjct: 231 LTFVGVVGM 239
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 69.7 bits (170), Expect = 8e-15
Identities = 46/138 (33%), Positives = 64/138 (46%), Gaps = 30/138 (21%)
Query: 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG 709
T G D ++ K +V + GI V M+TGDN +A+AI+RE
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL------------ 58
Query: 710 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769
V+A P K VK L+ EVVA GDG NDAPAL +A
Sbjct: 59 ---------------NLDLVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQA 101
Query: 770 DIGLAMGIAGTEVELECC 787
D+G+A+G +G++V +E
Sbjct: 102 DLGIAVG-SGSDVAVESG 118
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.8 bits (152), Expect = 1e-12
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 239 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESE 294
+V R + ++I D++PGDIV + +GD+VPAD +S ++ +++S LTGES
Sbjct: 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESV 61
Query: 295 PVNVNA------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336
V + L SGT + G +V T G+ T+ GK+ +
Sbjct: 62 SVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 60.4 bits (145), Expect = 8e-11
Identities = 22/178 (12%), Positives = 46/178 (25%), Gaps = 10/178 (5%)
Query: 612 LNETIEKFASEALRTLCLACM--EIGNEFSADAPIPTEGYTC----IGIVGIKDPMRPGV 665
+ ++ FA L + + + + V +R G
Sbjct: 21 IINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGF 80
Query: 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725
+E VA I +++G + I F + +
Sbjct: 81 REFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR--IYCNHASF-DNDYIHIDWPHS 137
Query: 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVE 783
+ K +++ L + + + GD D A +D+ A E
Sbjct: 138 CKGTCSNQCGCCKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECR 194
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.5 bits (130), Expect = 8e-09
Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 7/124 (5%)
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 713
I + PG++E V+ + + V +++G + + +A + I N A
Sbjct: 76 IAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF-- 133
Query: 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIG 772
+ + + K ++K L+ + + + GDG D A AD
Sbjct: 134 ----YFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAF 189
Query: 773 LAMG 776
+ G
Sbjct: 190 IGFG 193
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 799 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.97 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.95 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.88 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.11 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.08 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.05 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.02 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.99 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.89 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.84 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.76 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.75 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.73 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.67 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.64 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.61 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.56 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.38 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.19 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.69 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.52 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.48 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.32 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.2 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.14 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.11 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.92 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.82 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.52 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.47 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.42 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.25 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.2 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.19 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.02 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.73 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.5 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.64 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.74 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 92.71 | |
| d1cpza_ | 68 | Copper chaperone {Enterococcus hirae [TaxId: 1354] | 92.31 | |
| d2aw0a_ | 72 | Menkes copper-transporting ATPase {Human (Homo sap | 92.26 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 91.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 91.46 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 90.72 | |
| d1q8la_ | 84 | Menkes copper-transporting ATPase {Human (Homo sap | 90.71 | |
| d1osda_ | 72 | Mercuric ion binding protein MerP {Ralstonia metal | 90.63 | |
| d2qifa1 | 69 | Copper chaperone {Bacillus subtilis, CopZ [TaxId: | 90.5 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 90.47 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 90.21 | |
| d2ggpb1 | 72 | Copper transporter domain ccc2a {Baker's yeast (Sa | 89.95 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 89.9 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 89.7 | |
| d1p6ta2 | 79 | Potential copper-translocating P-type ATPase CopA | 89.62 | |
| d1p6ta1 | 72 | Potential copper-translocating P-type ATPase CopA | 89.34 | |
| d1kvja_ | 79 | Menkes copper-transporting ATPase {Human (Homo sap | 87.51 | |
| d1mwza_ | 73 | Metal ion-transporting ATPase ZntA, N-terminal dom | 86.89 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 85.32 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 83.19 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 82.59 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 81.95 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.9e-35 Score=282.83 Aligned_cols=140 Identities=42% Similarity=0.605 Sum_probs=134.1
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
-||+||+++++|+.|+++||+|+|+|||+..||.++|++|||..++. ..+.|.++..++..++.+.++++.+|||+
T Consensus 18 ~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 18 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred cCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 39999999999999999999999999999999999999999987654 46899999999999999999999999999
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
+|+||..+|+.||+. |++|+|+|||+||+|||++|||||||| +|+++|+++||+ ||++|+++|.
T Consensus 98 ~p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~ 166 (168)
T d1wpga2 98 EPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVE 166 (168)
T ss_dssp CHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHH
T ss_pred chhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999 999999999999 8999999873
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.97 E-value=6.5e-31 Score=242.11 Aligned_cols=121 Identities=39% Similarity=0.532 Sum_probs=106.3
Q ss_pred ceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCce
Q 003740 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (799)
Q Consensus 649 ~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (799)
.+..+.++++|++||+++++|+.|+++||+++|+|||+..+|.++|++|||..
T Consensus 10 ~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~--------------------------- 62 (135)
T d2b8ea1 10 KTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------- 62 (135)
T ss_dssp CCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------
T ss_pred CceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh---------------------------
Confidence 34456789999999999999999999999999999999999999999999965
Q ss_pred EEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 729 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 729 v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
++++++|++|..+|+.+|+ |++|+|+|||+||+|||++|||||||| +|+++++++||+ ||++|+++|+
T Consensus 63 v~~~~~p~~k~~~v~~~q~--~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EECSCCHHHHHHHHHHHTT--TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred hccccchhHHHHHHHHHHc--CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 9999999999999999985 579999999999999999999999999 999999999999 9999999885
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=1.6e-29 Score=254.08 Aligned_cols=198 Identities=21% Similarity=0.244 Sum_probs=154.5
Q ss_pred eEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCC
Q 003740 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGG 541 (799)
Q Consensus 466 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~g~ 541 (799)
|+|+++|+.++.++.+..............+.+..+..+.++|+++.+..++.+ .+...|+|||.||+.|+...+.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 899999999998875543332222223345666667788888888877655432 3456899999999999999999
Q ss_pred ChHHHhhhcceEEEecCCCCCceEEEEEEeC--CCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHH
Q 003740 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619 (799)
Q Consensus 542 ~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~--~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~ 619 (799)
+....+..++++..+||+|.+|+|+++++.+ ++.+++|+|||||.||++|++++. +|...+|+++.++.+.+.++.|
T Consensus 82 ~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~ 160 (214)
T d1q3ia_ 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLEL 160 (214)
T ss_dssp CHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred CHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875 356889999999999999999875 7889999999999999999999
Q ss_pred HHhccceeeEEEEEcCCCC--------CCCCCCCCCcceeeeeecccCCCccc
Q 003740 620 ASEALRTLCLACMEIGNEF--------SADAPIPTEGYTCIGIVGIKDPMRPG 664 (799)
Q Consensus 620 a~~g~r~l~~a~~~~~~~~--------~~~~~~~~~~~~~lg~~~~~D~~R~~ 664 (799)
+.+|+|||+||||+++.+. ..+.+..+.+|+|+|++||.||||++
T Consensus 161 a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 161 GGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9999999999999997652 12234567899999999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.95 E-value=5.8e-34 Score=312.25 Aligned_cols=323 Identities=11% Similarity=0.014 Sum_probs=220.6
Q ss_pred cccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003740 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (799)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (799)
+-+.+.|+||..+++|+|||||+|.|+|++..+.........+. ..++.+ ..++....+++ .+...
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~--------~g~n~~-~dl~~~~~~~~-~~~~~---- 93 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKS--------LGLNSN-WDMLFIVFSIH-LIDIL---- 93 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHH--------TTCCCH-HHHHHHHHHHH-HHHHH----
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhh--------cCCChh-HHHHHHHHHHH-HHHHH----
Confidence 44667899999999999999999999998744221111100000 011111 22221111111 11111
Q ss_pred CceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccC
Q 003740 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (799)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (799)
...++|++.+++......+......++.+......||++.+|+|+++....+..+....+|+++.+.
T Consensus 94 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~---------- 160 (380)
T d1qyia_ 94 ---KKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH---------- 160 (380)
T ss_dssp ---TTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----------
T ss_pred ---hhcCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----------
Confidence 1156788888876544333334455566777778999999999987655444444444556655431
Q ss_pred CeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcc--cHHHHHHHHHhCC
Q 003740 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAG 676 (799)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~--~v~~aI~~l~~aG 676 (799)
+++..+..+...+..|+.+|+|+++++|+.++.... ....+....|+++.+||+|| |++++++.|+++|
T Consensus 161 -----~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~----~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aG 231 (380)
T d1qyia_ 161 -----VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK----KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAG 231 (380)
T ss_dssp -----CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC----SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTT
T ss_pred -----CcHHHHHHHHhHHHHHHHHHHHHHHHhhhccccccc----ccchhhHhcccccccccccchhhHHHHHHHHHHCC
Confidence 223334456667788999999999999876643211 11233445789999999655 9999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCccC--CceeecchhhhccCHHHHh---------hhcCCceEEEecCcccHHHHHHHH
Q 003740 677 ITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELS---------KLIPKIQVMARSSPMDKHTLVKHL 745 (799)
Q Consensus 677 I~v~mlTGD~~~tA~aiA~~~GI~~~--~~~~~~g~~~~~~~~~~~~---------~~~~~~~v~ar~sP~dK~~lV~~L 745 (799)
|++.|+|||+..+|+++++++||... ...++++.+.......... ..+....+++|.+|.+|..+|+.+
T Consensus 232 i~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~ 311 (380)
T d1qyia_ 232 FELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDN 311 (380)
T ss_dssp CEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 99999999999999999999999753 2345555554321111000 011123367899999999999999
Q ss_pred HHhCCCEEEEEcCCccCHHhhhcCC---eeeecCCCCCHHHHH----hcCC---ChHhHHHhh
Q 003740 746 RTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVELE----CCCF---NFSSRKTYI 798 (799)
Q Consensus 746 q~~~G~vVa~~GDG~NDapAL~~Ad---VGiamgi~gtevak~----aaDi---nf~si~~~i 798 (799)
+.. ++.|+|||||.||+||+|+|| |||+||++|++++++ .||+ ||..|.+.+
T Consensus 312 ~~~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 312 IVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp CSC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCC-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 999 999999999999999999999 999999999987766 8998 888887765
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=3.8e-28 Score=273.30 Aligned_cols=243 Identities=24% Similarity=0.356 Sum_probs=194.0
Q ss_pred hCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCC
Q 003740 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWP 197 (799)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~ 197 (799)
..+++++++.|+||+++||++++ +++|+++||+|+++.++.+|+|+.++++|+++++++|++++++|++++...++..
T Consensus 6 ~~~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 83 (472)
T d1wpga4 6 SKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEE 83 (472)
T ss_dssp GSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTS
T ss_pred hCCHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 35799999999999999999877 9999999999999999999999999999999999999999999999998765543
Q ss_pred --CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEE
Q 003740 198 --KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGL 275 (799)
Q Consensus 198 --~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ 275 (799)
..|+|+..|++.+++...++.+++++.++....+.+...+.
T Consensus 84 ~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~------------------------------------- 126 (472)
T d1wpga4 84 TITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA------------------------------------- 126 (472)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------------------
T ss_pred cchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------------------
Confidence 47999988887777777777776666665555554421110
Q ss_pred EEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHH
Q 003740 276 FVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVAT 355 (799)
Q Consensus 276 ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~ 355 (799)
...+++|+|.++++++.
T Consensus 127 ---------------------------------------------------------------~~~~~~P~d~~l~~~g~ 143 (472)
T d1wpga4 127 ---------------------------------------------------------------TEQDKTPLQQKLDEFGE 143 (472)
T ss_dssp ---------------------------------------------------------------CCCCCCHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------ccccCchHHHHHHHHHH
Confidence 11235889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhh
Q 003740 356 IIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK 435 (799)
Q Consensus 356 ~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ 435 (799)
.++..+..++..++...+.++ . .. .........+.+.|..+++++|+++|||||+++|++++++++||+|+|
T Consensus 144 ~i~~~~~~~~~~~~~~~~~~~-~-~~------~~~~~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~ 215 (472)
T d1wpga4 144 QLSKVISLICVAVWLINIGHF-N-DP------VHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKN 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHCCTTS-S-SC------CSSSCSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHH-H-HH------HhhhhhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhcc
Confidence 888877666655554322111 0 00 011111224567888999999999999999999999999999999999
Q ss_pred hhhcccchhhccCCceeEeecCC--CccccCceEEEE
Q 003740 436 ALVRHLAACETMGSATSICSDKT--GTLTTNHMTVLK 470 (799)
Q Consensus 436 ilvr~~~a~E~lg~v~~I~~DKT--GTLT~n~m~v~~ 470 (799)
++||++++||++|+.+++|+||| +|||.|-+.+..
T Consensus 216 ~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~~ 252 (472)
T d1wpga4 216 AIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVC 252 (472)
T ss_dssp EEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHHH
Confidence 99999999999999999999998 999999877643
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=1.9e-25 Score=198.35 Aligned_cols=98 Identities=35% Similarity=0.515 Sum_probs=89.3
Q ss_pred eeEEEeCCeE--EEEecCCCCcccEEEecCCCeecccEEEEeec--eeEEecccccCCCCccccCC------------CC
Q 003740 239 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESEPVNVNA------------LN 302 (799)
Q Consensus 239 ~v~V~R~g~~--~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~--~l~vDeS~lTGEs~pv~k~~------------~~ 302 (799)
.++|+|+|++ ++|++.||+|||||.|++||+|||||+|++++ ++.||||+|||||.|+.|.. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999974 78999999999999999999999999998754 48999999999999999953 34
Q ss_pred CEEEccceeeeceEEEEEEEEcccchhHHHHHhh
Q 003740 303 PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336 (799)
Q Consensus 303 ~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 336 (799)
|++|+||.|.+|+++++|++||.+|++|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 6899999999999999999999999999998764
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.88 E-value=2.5e-22 Score=204.77 Aligned_cols=161 Identities=20% Similarity=0.185 Sum_probs=132.0
Q ss_pred hHHHHHHHHHHhcCCceEEec-CCCceEEcCCchHHHHHHHHHHcCCChH----------------HHhhhcceEEEecC
Q 003740 496 SASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ----------------AERQASKIVKVEPF 558 (799)
Q Consensus 496 ~~~~~l~~~i~~~~~~~~~~~-~~~~~~~~g~p~e~All~~~~~~g~~~~----------------~~~~~~~i~~~~~F 558 (799)
+.++.+..+.++||++.+..+ +++.+...|+|+|.||+.++.+.|++.. ..+..++++..+||
T Consensus 48 ~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF 127 (239)
T d1wpga3 48 DGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127 (239)
T ss_dssp HHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeee
Confidence 344556677778888888765 3467788999999999999999887543 23567899999999
Q ss_pred CCCCceEEEEEEeCCC-----cEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHH--HHhccceeeEEE
Q 003740 559 NSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLAC 631 (799)
Q Consensus 559 ~s~~k~~~vv~~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~--a~~g~r~l~~a~ 631 (799)
+|.||+|+++++.+++ .+.+|+|||||.||++|++++. +|...|++++.++.+.+.++.+ +++|+|||+|||
T Consensus 128 ~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~ 206 (239)
T d1wpga3 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206 (239)
T ss_dssp ETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred cccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEE
Confidence 9999999999997654 3789999999999999998875 6778899999999999999986 679999999999
Q ss_pred EEcCCCCCCC-------CCCCCCcceeeeeecc
Q 003740 632 MEIGNEFSAD-------APIPTEGYTCIGIVGI 657 (799)
Q Consensus 632 ~~~~~~~~~~-------~~~~~~~~~~lg~~~~ 657 (799)
|+++.+.... ...+|.||+|+|++||
T Consensus 207 k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp ESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 9998653211 1235789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.11 E-value=1.5e-10 Score=114.85 Aligned_cols=137 Identities=20% Similarity=0.242 Sum_probs=98.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhh--------------------------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR-------------------------- 713 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~-------------------------- 713 (799)
.+.+.+.+++++|+++|++|+++||.+...+..++..+++... -..-.|..+.
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~-~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP-VVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 97 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC-EEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc-cccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence 4678999999999999999999999999999999999998532 0000010000
Q ss_pred --------------------ccCHH---HHhhhc-CC-------ceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCC
Q 003740 714 --------------------EKSDE---ELSKLI-PK-------IQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDG 759 (799)
Q Consensus 714 --------------------~~~~~---~~~~~~-~~-------~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG 759 (799)
....+ ++.+.+ .. ..+-.......|...++.+.+++| +.|+++|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 00111 222222 11 112233445789999998877644 568999999
Q ss_pred ccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 760 TNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 760 ~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.||.|||+.|++||||| ++++.+|++||+ |...++++|
T Consensus 178 ~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i 220 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAI 220 (230)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHH
T ss_pred ccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHH
Confidence 99999999999999999 999999999998 555565554
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=9.4e-11 Score=116.28 Aligned_cols=123 Identities=18% Similarity=0.243 Sum_probs=91.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCce------eecchhhhccCHHHHhhhcCCceEEEec
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI------AIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
+++|++.+.|+.|++.|++++++||.....+..+++.+||...+.. ..+|.-... .. ..--.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~----------~~--~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF----------DE--TQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEE----------CT--TSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccc----------ee--eeeee
Confidence 3689999999999999999999999999999999999999632100 001110000 00 00013
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHhhhcCCeeeecCC-CCCHHHHHhcCC---ChHhH
Q 003740 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGI-AGTEVELECCCF---NFSSR 794 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdVGiamgi-~gtevak~aaDi---nf~si 794 (799)
.+..|..+++.++++.+ ..+.++|||.||.+|++.|++++|+|- ...+..++.||. +|..+
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 46779999999987634 468999999999999999999999972 245667788887 77654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.05 E-value=5.2e-10 Score=111.22 Aligned_cols=140 Identities=19% Similarity=0.176 Sum_probs=98.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeecchhh--hc----------------
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGPEF--RE---------------- 714 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~~g~~~--~~---------------- 714 (799)
..++.+++.++++.|++.|++++++||.+...+..++...|+... ++ .+...... ..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 345678999999999999999999999999999999999998542 11 00000000 00
Q ss_pred -------------------cC---HHHHhhhc--CCceEE-------EecCcccHHHHHHHHHHhCC---CEEEEEcCCc
Q 003740 715 -------------------KS---DEELSKLI--PKIQVM-------ARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT 760 (799)
Q Consensus 715 -------------------~~---~~~~~~~~--~~~~v~-------ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~ 760 (799)
.. .+.+.... ....++ -.....+|...++.|.+.+| +-|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 00 01111111 111121 11234689999998877655 4588889999
Q ss_pred cCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 761 NDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 761 NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
||.||++.|++||||+ ++.+.+|+.||+ +...|.++|
T Consensus 178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l 219 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIF 219 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHH
T ss_pred chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHH
Confidence 9999999999999999 999999999999 667777655
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.02 E-value=3e-10 Score=108.18 Aligned_cols=93 Identities=19% Similarity=0.239 Sum_probs=82.3
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
.+|+.++..|+.+.++||+....+...++++++.. ++. ...+|...++.+.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------~~~--~~~~K~~~l~~~~ 89 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFL--GKLEKETACFDLM 89 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEE--SCSCHHHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------ccc--ccccHHHHHHHHH
Confidence 38999999999999999999999999999999963 333 4567887777766
Q ss_pred HhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 747 ~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+++| +.|+++|||.||.|+|+.|++|+||+ +|.+.+|++||+
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~ 134 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDH 134 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSE
T ss_pred HHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCE
Confidence 6545 78999999999999999999999999 999999999998
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.99 E-value=1.4e-10 Score=115.41 Aligned_cols=131 Identities=14% Similarity=0.074 Sum_probs=97.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC---ceeecchhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN---GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+.... ...+.+...... ...+.....++..|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHH
Confidence 46899999999999999999999999999999999999986421 111111111000 000111133467899
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHh-cCC----ChHhHHHhh
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELEC-CCF----NFSSRKTYI 798 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~a-aDi----nf~si~~~i 798 (799)
.|..+++.++.. ++.|.|+||+.||.+|+++||+++|++ .+.+.+++. .+. ||+.|+..|
T Consensus 149 ~~~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 149 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQDFYEIRKEI 213 (226)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeeecCCHHHHHHHH
Confidence 999999999888 899999999999999999999999999 555555444 443 999887654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.89 E-value=3.7e-09 Score=102.51 Aligned_cols=124 Identities=20% Similarity=0.153 Sum_probs=96.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
+..++....++.++ .+.++..+|+.............++.......++... ...........+..+.
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 69 KPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD------------SDRVVGYQLRQKDPKR 135 (206)
T ss_dssp CCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECT------------TSCEEEEECCSSSHHH
T ss_pred cccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeec------------ccccccccccchhhHH
Confidence 44667777777765 6899999999999999999999998643111111100 0112244556667777
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC----ChHhHHHhh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF----NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi----nf~si~~~i 798 (799)
..++.++-. .+-|+++|||.||.|||+.|++||||+ +..++.++++|+ |+..++++|
T Consensus 136 ~~~~~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~~~~~d~~~~~ 196 (206)
T d1rkua_ 136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHH
T ss_pred HHHHHhccc-ccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceeecCHHHHHHHH
Confidence 888888877 889999999999999999999999997 889999999999 999999876
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.84 E-value=3.2e-09 Score=108.24 Aligned_cols=130 Identities=25% Similarity=0.355 Sum_probs=92.7
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--cchhhh---------c-------------
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFR---------E------------- 714 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~--~g~~~~---------~------------- 714 (799)
-.+-|.+.+++++|+++|+++.++||.+...+..+.+++++..+...++ .|..+. .
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 3467889999999999999999999999999999999999875422110 110000 0
Q ss_pred -----------------------c------------------------------------CHH---HHhhhcC-----Cc
Q 003740 715 -----------------------K------------------------------------SDE---ELSKLIP-----KI 727 (799)
Q Consensus 715 -----------------------~------------------------------------~~~---~~~~~~~-----~~ 727 (799)
. .++ +..+.++ +.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 0 000 1111110 11
Q ss_pred eE------EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 728 QV------MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 728 ~v------~ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+ +...+| .+|...|+.+.+.+| .-|+++|||.||.+||+.|+.|+||+ ++++..|+.||.
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~ 251 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANF 251 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSE
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCE
Confidence 11 122334 379999999987744 35899999999999999999999999 999999999997
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=7.7e-09 Score=105.30 Aligned_cols=53 Identities=26% Similarity=0.319 Sum_probs=48.3
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+|..-++.|++++| +-|.++|||.||.|||+.|+.|+||+ +|.+..|+.||.
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~ 244 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARY 244 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSE
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCE
Confidence 469999999987756 35889999999999999999999999 999999999997
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.75 E-value=1.8e-08 Score=103.31 Aligned_cols=52 Identities=33% Similarity=0.344 Sum_probs=48.7
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+|..-++.+.+.+| +.|+++|||.||.+||+.|+.|+||+ +|++.+|+.||.
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~ 267 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADA 267 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSE
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCE
Confidence 89999999988766 46999999999999999999999999 999999999998
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.73 E-value=1.3e-08 Score=104.00 Aligned_cols=53 Identities=25% Similarity=0.248 Sum_probs=47.4
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..|..-++.|.+.++ +.|+++|||.||.+||+.|++|+||+ +|.+.+|+.||.
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~ 261 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKC 261 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSE
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCE
Confidence 478888888776644 57999999999999999999999999 999999999997
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.67 E-value=4.7e-08 Score=99.36 Aligned_cols=62 Identities=29% Similarity=0.328 Sum_probs=52.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.+|..-|+.|.+.+| .-|+++|||.||.|||+.|++|+||| +|++.+|+.||. +-..++++|
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i 258 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVL 258 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHH
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHH
Confidence 379999999877655 34788899999999999999999999 999999999998 555555554
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.64 E-value=1.7e-08 Score=102.39 Aligned_cols=53 Identities=30% Similarity=0.406 Sum_probs=48.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..|..-++.|.+++| +.++++|||.||.+||+.|+.|+||+ +|++.+|+.||.
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~ 240 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADY 240 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSE
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCE
Confidence 479999999987655 56888899999999999999999999 999999999997
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.61 E-value=3.2e-08 Score=95.92 Aligned_cols=129 Identities=16% Similarity=0.156 Sum_probs=92.4
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe--cC
Q 003740 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR--SS 734 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar--~s 734 (799)
...++.+++.+.++.++..|..+.++||.....+....++.++...-...+...+.. ....... ..
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 139 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------LTGDVEGEVLK 139 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE------------EEEEEECSSCS
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc------------ccccccccccc
Confidence 445778899999999999999999999999999999999999864211111111110 0000001 11
Q ss_pred cccHHHHHHHHHHhC---CCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 735 PMDKHTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~---G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
+..|...++.+.+.+ .+.+.++|||.||.||++.|++|||| ++.+..|+.||+ |+..|++.|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 140 ENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYIK 210 (210)
T ss_dssp TTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGCC
T ss_pred cccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHhC
Confidence 233444444443331 35688999999999999999999999 689999999999 7889988764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.56 E-value=5.1e-08 Score=97.02 Aligned_cols=44 Identities=9% Similarity=0.045 Sum_probs=39.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
.+...+.++++|++|+++|+.+.++||.+...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34445779999999999999999999999999999999999864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.38 E-value=5.3e-07 Score=89.87 Aligned_cols=126 Identities=16% Similarity=0.157 Sum_probs=87.2
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-eecchhhhc---------------cC----------
Q 003740 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFRE---------------KS---------- 716 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~-~~~g~~~~~---------------~~---------- 716 (799)
++..+++.++++.|+.+.++||.+...+..+.+++|+..+... .-.|..+.. ..
T Consensus 21 ~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T d1s2oa1 21 LEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhh
Confidence 3455567777889999999999999999999999998654211 001110000 00
Q ss_pred --------------------------H---HHHh----hhcCCce--------EEEecCcccHHHHHHHHHHhCC---CE
Q 003740 717 --------------------------D---EELS----KLIPKIQ--------VMARSSPMDKHTLVKHLRTTLG---EV 752 (799)
Q Consensus 717 --------------------------~---~~~~----~~~~~~~--------v~ar~sP~dK~~lV~~Lq~~~G---~v 752 (799)
+ +++. +...... +---....+|...++.|.+.+| ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~ 180 (244)
T d1s2oa1 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred cccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhh
Confidence 0 1111 1111111 1112234689999999988865 45
Q ss_pred EEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 753 Va~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
|.++|||.||.|||+.|+.|++|| ++.+-.|+.||.
T Consensus 181 ~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~ 216 (244)
T d1s2oa1 181 TLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQ 216 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhc
Confidence 888999999999999999999999 999999999884
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.19 E-value=3.8e-06 Score=82.09 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=38.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
.+-+.+++++++|+++|+.++++||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46678999999999999999999999999999999999985
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.69 E-value=8.4e-06 Score=79.88 Aligned_cols=53 Identities=17% Similarity=0.267 Sum_probs=46.5
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHhhhcCC-eeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GD----G~NDapAL~~Ad-VGiamgi~gtevak~aaDi 789 (799)
-+|..-++.|.+...+-|.++|| |-||.+||++|. .|+||+ ++.|..|..+||
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~ 241 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREI 241 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHH
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHh
Confidence 68999999997653568999999 569999999996 799999 999999999875
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.52 E-value=3.6e-05 Score=75.16 Aligned_cols=120 Identities=17% Similarity=0.160 Sum_probs=80.2
Q ss_pred CcccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc--cc
Q 003740 661 MRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 737 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aG-I~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP--~d 737 (799)
+-||+.+.+++|++.| +++.++|+.....+..+.+..||...-+.++.+.+.. .+ .| .-
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~-----------------~~-k~~p~~ 153 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDAL-----------------DR-NELPHI 153 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCS-----------------SG-GGHHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccc-----------------cc-cchhHH
Confidence 3589999999999987 8999999999999999999999975433333333211 00 11 11
Q ss_pred HHHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCC---eeeecCCCCCH-HHHHhcCC---ChHhHHHhh
Q 003740 738 KHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD---IGLAMGIAGTE-VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~Ad---VGiamgi~gte-vak~aaDi---nf~si~~~i 798 (799)
-...++.+... ..+.+.|+||+.+|..|-+.|+ |+|+.|....+ ..+..+|+ ||+.+.+.|
T Consensus 154 ~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 154 ALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 223 (228)
T ss_dssp HHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred HHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHH
Confidence 12223333221 1257899999999999999999 55666632223 24445677 777776654
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.48 E-value=4.5e-05 Score=73.83 Aligned_cols=123 Identities=20% Similarity=0.252 Sum_probs=85.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
.+.|++++.++.|++.|+++.++||.....+..+.+++||...-..++...+... ....|+--.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~kp~p~~~~ 158 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPFY 158 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc----------------ccccchhhH
Confidence 3579999999999999999999999999999999999999754333333332110 111233333
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe---eeecCCC-CCHHHHHhcCC---ChHhHHHhhC
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI---GLAMGIA-GTEVELECCCF---NFSSRKTYIL 799 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV---Giamgi~-gtevak~aaDi---nf~si~~~i~ 799 (799)
.+.+.++-. .+.++|+||..+|..+-+.|++ ++.-|.. ..+..+.-+|. ||+.+++.|.
T Consensus 159 ~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~iie 224 (224)
T d2hsza1 159 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKITQ 224 (224)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGTC
T ss_pred HHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhhC
Confidence 334444333 5779999999999999999986 4443322 23445555776 9999888763
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.00011 Score=70.79 Aligned_cols=94 Identities=18% Similarity=0.274 Sum_probs=69.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc--cc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP--~d 737 (799)
++.||+.++++.|++.|+++.++|+.....+..+.+..|+...-..++.+++.. +.-| +-
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~------------------~~Kp~~~~ 149 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP------------------YSKPHPQV 149 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS------------------CCTTSTHH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc------------------cchhhHHH
Confidence 346999999999999999999999999999999999999975444444444321 1122 11
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
=...++.+.-. .+.++|+||..+|..|-+.|++-
T Consensus 150 ~~~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~ 183 (218)
T d1te2a_ 150 YLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMR 183 (218)
T ss_dssp HHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCE
Confidence 22333333222 36789999999999999999974
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.20 E-value=0.00049 Score=61.24 Aligned_cols=107 Identities=20% Similarity=0.320 Sum_probs=68.8
Q ss_pred cCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEee
Q 003740 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 603 (799)
Q Consensus 524 ~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 603 (799)
|.||+.+||+++|++.+..... .....-....||....+..++.+ .+ +.+..|++..+..... ..|. .
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~--~g---~~v~~G~~~~~~~~~~----~~g~--~ 96 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRER-DVQSLHATFVPFTAQSRMSGINI--DN---RMIRKGSVDAIRRHVE----ANGG--H 96 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCC-CTTTTTCEEEEEETTTTEEEEEE--TT---EEEEEECHHHHHHHHH----HHTC--C
T ss_pred CCchHHHHHHHHHHHhcCCCcc-ccccccccccccccccceEEEEE--CC---EEEEecHHHHHHHHHH----HcCC--C
Confidence 7899999999999876432110 11222334566666665544432 22 2345688877654332 1121 1
Q ss_pred CCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCc
Q 003740 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 662 (799)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R 662 (799)
++ ..+.+.++.+..+|..++.+| .|..++|++++.|+++
T Consensus 97 ~~----~~~~~~~~~~~~~G~Tvv~Va----------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 97 FP----TDVDQKVDQVARQGATPLVVV----------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp CC----HHHHHHHHHHHHTTSEEEEEE----------------ETTEEEEEEEEEESSC
T ss_pred Cc----HHHHHHHHHHHHCCCeEEEEE----------------ECCEEEEEEEEEeecC
Confidence 22 346677888999999999887 5678999999999986
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.14 E-value=6.8e-05 Score=72.61 Aligned_cols=39 Identities=21% Similarity=0.398 Sum_probs=32.1
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
.+|..-++.|.+. . -+.++||+.||.+||+.|+-|+||+
T Consensus 158 ~~Kg~al~~l~~~-~-~~i~~GDs~ND~~Mf~~~~~~~av~ 196 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-R-PAIIAGDDATDEAAFEANDDALTIK 196 (229)
T ss_dssp CCHHHHHHHHHTT-S-CEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred CCHHHHHHHHhcc-c-cceeecCCCChHHHHhccCCeEEEE
Confidence 6899999999877 4 4667899999999999996655554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11 E-value=0.00048 Score=69.42 Aligned_cols=111 Identities=14% Similarity=0.155 Sum_probs=68.7
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeec-chhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIE-GPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
-++|||+++.++.|++.|+.+.++||--.....++++++|+..++-.++. .-+|. ++.+.--++.- -.....
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~---~~~~~~~~~~~----~i~~~~ 206 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFD---ENGVLKGFKGE----LIHVFN 206 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEEC---TTSBEEEECSS----CCCTTC
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEe---CCeeEeeccCC----cccccc
Confidence 35899999999999999999999999999999999999999754321111 00000 00000000000 012234
Q ss_pred HHHHHH----HHHHh-CCCEEEEEcCCccCHHhhhc---CCeeeecC
Q 003740 738 KHTLVK----HLRTT-LGEVVAVTGDGTNDAPALHE---ADIGLAMG 776 (799)
Q Consensus 738 K~~lV~----~Lq~~-~G~vVa~~GDG~NDapAL~~---AdVGiamg 776 (799)
|...+. .++.. ....|.++|||.||.+|.+. ++..++.|
T Consensus 207 K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~ig 253 (291)
T d2bdua1 207 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIG 253 (291)
T ss_dssp HHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEE
T ss_pred CcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeee
Confidence 443332 11221 14578999999999999874 45555555
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.92 E-value=0.00072 Score=64.38 Aligned_cols=116 Identities=15% Similarity=0.110 Sum_probs=82.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.+++.+.++.++..+ ++.++|+.....+..+.+.+|+...-+.++. +...+..|-
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~----------------------~~~~~~~~p 140 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYG----------------------SSPEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE----------------------ECSSCCSHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccccccc----------------------ccccccccc
Confidence 45789999999999775 8999999999999999999999754333332 333344444
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe---eeecCCCCCH-HHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTE-VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV---Giamgi~gte-vak~aaDi---nf~si~~~i 798 (799)
.+++...+++| +.+.||||+.||..|-++|++ ++.-|....+ .....+|. ++..+++.|
T Consensus 141 ~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred cccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 55555544434 578899999999999999997 5544532222 23334677 888887765
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.82 E-value=0.00075 Score=66.58 Aligned_cols=96 Identities=20% Similarity=0.189 Sum_probs=68.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.++++.|++.|+++.++||.+...+..+-+..|+.... +.++.+++... ..-.|..=
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~----------------~KP~p~~~ 162 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA----------------GRPYPWMC 162 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC----------------CTTSSHHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccc----------------cccChHHH
Confidence 56899999999999999999999999999999999999986532 33444443210 11122222
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe
Q 003740 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 739 ~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV 771 (799)
....+.+.-...+.++|+||..+|..+=+.|++
T Consensus 163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence 333333332113568999999999999999986
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.52 E-value=0.0005 Score=65.30 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=67.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++.|+++.++|+... .+..+-+..||...-+.++..++.. ...-.|+-=.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~----------------~~Kp~~~~~~ 144 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGF----------------VRKPSPEAAT 144 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCC----------------CCTTSSHHHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccccccccccccc----------------ccchhHHHHH
Confidence 3579999999999999999999998654 5667888999975433333333211 0111222222
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee-eecCCCCC
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT 780 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG-iamgi~gt 780 (799)
.+++.+.-. .+.++||||+.+|..+-++|++- |.+. .++
T Consensus 145 ~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~ 184 (204)
T d2go7a1 145 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST 184 (204)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS
T ss_pred HHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC
Confidence 333333222 36899999999999999999984 3454 443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.47 E-value=0.0003 Score=67.12 Aligned_cols=119 Identities=13% Similarity=0.219 Sum_probs=77.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++ ++++.++|+-....+..+.++.|+...-..++.+.+... ..-.|+--.
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------------~KP~p~~~~ 144 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK----------------RKPDPLPLL 144 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC----------------CTTSSHHHH
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccccccccccccccc----------------chhhhhhhc
Confidence 356899999999975 799999999999999999999999754334444433210 011222223
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeec---CCCCCHHHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiam---gi~gtevak~aaDi---nf~si~~~ 797 (799)
.+++.++-. -+.+.||||..+|..+-++|++...+ | ..+....+.+|. ++..|++.
T Consensus 145 ~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 145 TALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEESSGGGGGGG
T ss_pred ccccceeee-ccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeCCHHHHHhh
Confidence 333333211 25788999999999999999887543 4 333333445555 77766654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.42 E-value=0.0038 Score=58.20 Aligned_cols=109 Identities=13% Similarity=0.025 Sum_probs=74.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+++.++.|++.|+++.++|+-+.... .+-+.+|+...-+.++.+++... ..-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~--- 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK----------------RKPNPE--- 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC----------------CTTSCH---
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccc----------------cCCCHH---
Confidence 4579999999999999999999999766554 56788998754334444433110 000112
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+-..+++.--+.+.|+||..+|..|-++|++=... .++.+-.++.-||
T Consensus 139 ~~~~~~~~~~~~~~l~vgDs~~Di~aA~~aG~~~i~-v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEE-CSCHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCeEEEeCCHHHHHHHHHcCCEEEE-ECCCCChHhhcCC
Confidence 222222222124589999999999999999987543 4888888888776
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.25 E-value=0.004 Score=59.97 Aligned_cols=117 Identities=16% Similarity=0.154 Sum_probs=77.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|+ +|+++.++|+........+.+.+|+...-+.++...+.. ..-| +..
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------------------~~KP-~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAG------------------FFKP-HPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHT------------------BCTT-SHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccccccccc------------------ccch-hhH
Confidence 46799999999997 589999999999999999999999975433443333321 1112 222
Q ss_pred HHHHHHHHhCC---CEEEEEcCC-ccCHHhhhcCCeee---ecCCCCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGL---AMGIAGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG-~NDapAL~~AdVGi---amgi~gtevak~aaDi---nf~si~~~i 798 (799)
-+-..+++. | ..++|+||. .+|..+-+.|++-. .-+ ....-..+.+|+ ||+.+++.|
T Consensus 160 ~~~~~~~~l-~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~-~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 160 IFELALKKA-GVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp HHHHHHHHH-TCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTT-SCCGGGGGGSSEEESSTTHHHHHH
T ss_pred HHHHHHhhh-cccccccceeecCcHhHHHHHHHcCCEEEEECCC-CCCcccccCCCEEECCHHHHHHHH
Confidence 333344443 4 569999997 68999988898742 222 222234455677 788776654
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.20 E-value=0.0048 Score=56.26 Aligned_cols=87 Identities=14% Similarity=0.110 Sum_probs=61.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.++++.|++.|+++.++|+-+ ...+..+-+..++...... +...-.|..+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~-----------------------~~~~~kp~~~ 102 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ-----------------------REIYPGSKVT 102 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE-----------------------EEESSSCHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccccee-----------------------eecccCCChH
Confidence 468999999999999999999999654 5667777777777532110 2233333322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV 771 (799)
. +-+.+++. | +.+.|+||..+|..+-++|++
T Consensus 103 ~-~~~~~~~~-~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 103 H-FERLHHKT-GVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp H-HHHHHHHH-CCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred H-HHHHHHHh-CCChHHEEEEcCCHHHHHHHHHcCC
Confidence 2 22333333 4 688999999999999999988
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.19 E-value=0.00098 Score=64.48 Aligned_cols=48 Identities=21% Similarity=0.340 Sum_probs=36.4
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHhhhcCC-eeeecCCCCCHHHH
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVEL 784 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GD----G~NDapAL~~Ad-VGiamgi~gtevak 784 (799)
-+|..-++.|.....+-|+++|| |-||.+||+.|+ .|++++ +..|+-|
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~~~~ 236 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRR 236 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHHHHH
Confidence 57888888776543578999999 789999999997 788887 7666544
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.0034 Score=60.66 Aligned_cols=99 Identities=17% Similarity=0.101 Sum_probs=68.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeec-chhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIE-GPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
.-.+.||+.+.++.|++.|+++.++|+............+|+..-...... .++. .+.-|
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~------------------~~~KP- 185 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK------------------IGHKV- 185 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG------------------GCCTT-
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccc------------------cccCC-
Confidence 345689999999999999999999999999999999999998542111100 0000 01122
Q ss_pred cHHHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCeeeec
Q 003740 737 DKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 737 dK~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
+..-+-..+++. .-+.++|+||..+|..+-++|++-...
T Consensus 186 ~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~ 226 (253)
T d1zs9a1 186 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAV 226 (253)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEE
Confidence 222333334333 136899999999999999999985544
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.73 E-value=0.01 Score=55.09 Aligned_cols=113 Identities=14% Similarity=0.089 Sum_probs=70.7
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHH---------------HHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCC
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINT---------------AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~t---------------A~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~ 726 (799)
-||+.++++.|+++|+++.++|.-.... ........|+.. .
T Consensus 29 ~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 84 (182)
T d2gmwa1 29 IDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL------------------------D 84 (182)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC------------------------S
T ss_pred CCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccc------------------------c
Confidence 4899999999999999999999976321 011112222211 1
Q ss_pred ceEEEecCcccH---------------HHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee--eec--CCCCCHHHHH
Q 003740 727 IQVMARSSPMDK---------------HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG--LAM--GIAGTEVELE 785 (799)
Q Consensus 727 ~~v~ar~sP~dK---------------~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG--iam--gi~gtevak~ 785 (799)
-..+|...|+.+ .-+.+.+++. --+.+.||||..+|..|=+.|+++ +.+ |..-.+-.+.
T Consensus 85 ~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~ 164 (182)
T d2gmwa1 85 GIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAEN 164 (182)
T ss_dssp EEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHH
T ss_pred ceeecccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCccccc
Confidence 113333333321 1233444433 025689999999999999999984 222 3223466677
Q ss_pred hcCC---ChHhHHHhh
Q 003740 786 CCCF---NFSSRKTYI 798 (799)
Q Consensus 786 aaDi---nf~si~~~i 798 (799)
.||. |+..+++.|
T Consensus 165 ~ad~v~~~l~dl~~~i 180 (182)
T d2gmwa1 165 AADWVLNSLADLPQAI 180 (182)
T ss_dssp HCSEEESCGGGHHHHH
T ss_pred CCCEEECCHHHHHHHh
Confidence 7998 999888876
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.50 E-value=0.0044 Score=55.31 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=61.3
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhh--cCCceEEEe--
Q 003740 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL--IPKIQVMAR-- 732 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~v~ar-- 732 (799)
.+|.+.|++.+.++.|++.|+++.++||-+......+-+.++.. ...+... .+....+.+
T Consensus 33 ~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~----------------~~~~~~~~~~~~~~~~~~~~ 96 (149)
T d1ltqa1 33 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT----------------RKWVEDIAGVPLVMQCQREQ 96 (149)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH----------------HHHHHHTTCCCCSEEEECCT
T ss_pred ccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH----------------hhhhhhcCCCcEEEeecccc
Confidence 36889999999999999999999999998643221111111100 0000000 011112221
Q ss_pred ----cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe
Q 003740 733 ----SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 733 ----~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV 771 (799)
-.+.-|..+.+.+......+++|+||--.|+.|.++++|
T Consensus 97 ~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi 139 (149)
T d1ltqa1 97 GDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGV 139 (149)
T ss_dssp TCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTC
T ss_pred cccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCC
Confidence 123456677776655535678899999999999999887
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.64 E-value=0.024 Score=54.61 Aligned_cols=92 Identities=15% Similarity=0.187 Sum_probs=65.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++ |+++.++|+.........-+.+|+...-+.++.+.+.. ..-|. ..
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------------------~~KP~-p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK------------------EEKPA-PS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS------------------SCTTC-HH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccc------------------cchhh-hh
Confidence 367999999999985 89999999999999999999999975433333333321 11121 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdVG 772 (799)
-+-+.+++. | +.+.|+||.. +|..+-+.|++.
T Consensus 169 ~~~~~~~~~-~~~~~~~l~iGD~~~~Di~~A~~~G~~ 204 (247)
T d2gfha1 169 IFYHCCDLL-GVQPGDCVMVGDTLETDIQGGLNAGLK 204 (247)
T ss_dssp HHHHHHHHH-TCCGGGEEEEESCTTTHHHHHHHTTCS
T ss_pred hHHHHHHHh-hcCHHhcceeccChHhHHHHHHHcCCe
Confidence 233333333 3 5688999985 899999999986
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.74 E-value=0.025 Score=53.16 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=62.5
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEec--C
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS--S 734 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~----~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~--s 734 (799)
+-|++.+.++.+++.|++|..|||.. ..|++.+-+.+|+...+... .++.+. .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~---------------------vll~~~~~~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNP---------------------VIFAGDKPG 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCC---------------------CEECCCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccc---------------------eEeeCCCCC
Confidence 45799999999999999999999964 45777777889996432110 023222 2
Q ss_pred cccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe
Q 003740 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV 771 (799)
...|...|+. . .+++++||..+|..|-.+|++
T Consensus 146 K~~rr~~Ik~---y--~I~l~~GD~l~Df~aA~eagi 177 (209)
T d2b82a1 146 QNTKSQWLQD---K--NIRIFYGDSDNDITAARDVGA 177 (209)
T ss_dssp CCCSHHHHHH---T--TEEEEEESSHHHHHHHHHTTC
T ss_pred chHHHHHHHH---c--CeEEEecCCHHHHhHHHHcCC
Confidence 3556666643 2 589999999999999999986
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=92.71 E-value=0.024 Score=53.57 Aligned_cols=97 Identities=11% Similarity=0.153 Sum_probs=67.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++-||+.+.++.|++.|+++.++|+.+. +..+-+..|+...-..++.+.+.. ..-|.-
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~------------------~~KP~~- 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVA------------------ASKPAP- 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSS------------------SCTTST-
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccccccccccc------------------ccccCh-
Confidence 45678999999999999999999999764 577888899976544444444321 112222
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCe-eeecC
Q 003740 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI-GLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdV-Giamg 776 (799)
.-+-+.+++. -.+.++|+||..+|..|-+.|++ .|.++
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC
Confidence 2233344433 13568899999999999999987 44444
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Probab=92.31 E-value=0.0028 Score=48.71 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=48.4
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (799)
..|..+.|+.+.+.+++..++|++.+.++.+.|++. ..+..++...++.+||.+.
T Consensus 12 ~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~a~ 66 (68)
T d1cpza_ 12 NHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEA--NVQATEICQAINELGYQAE 66 (68)
T ss_dssp SSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhhCCCcE
Confidence 357778899999999999999999999999999776 5677889999999999764
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.26 E-value=0.0019 Score=50.30 Aligned_cols=56 Identities=16% Similarity=0.224 Sum_probs=48.9
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (799)
..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+..++...++++||.+..
T Consensus 15 ~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~a~l 70 (72)
T d2aw0a_ 15 NSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPL--LTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhhCCCcEe
Confidence 357788899999999999999999999999999876 56678899999999998753
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.93 E-value=0.068 Score=50.13 Aligned_cols=109 Identities=13% Similarity=0.136 Sum_probs=70.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcC----CCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTG----DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTG----D~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
.++|++.+.++.|+++|+++.++|+ .............|+...-+.++.+.+... ..-.|
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~----------------~KP~p 160 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGM----------------IKPEP 160 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSC----------------CTTCH
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccC----------------CCCCh
Confidence 4579999999999999999999996 334455556667777543334444433210 11123
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe-eeecCCCCCHHHHHh
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVELEC 786 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV-Giamgi~gtevak~a 786 (799)
+--....+.++-. -+-+.|+||..+|..+-++|++ +|-+- ++.+...+-
T Consensus 161 ~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~~~el 210 (222)
T d1cr6a1 161 QIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVH-NTASALREL 210 (222)
T ss_dssp HHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHHHHHH
T ss_pred HHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEEC-CcchHHHHH
Confidence 3333444444333 3568899999999999999997 55444 666655543
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=91.46 E-value=0.078 Score=49.67 Aligned_cols=119 Identities=10% Similarity=0.075 Sum_probs=79.2
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++.+++.++++.+++.|+++.++|+-.......+-+..|+...-+.++...+... .-| +.
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~------------------~KP-~p 152 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV------------------YKP-DN 152 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC------------------CTT-SH
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec------------------ccc-HH
Confidence 34568999999999999999999999999999999999998765444444443221 112 12
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCC-CCC--HHHHHhcCC---ChHhHHHh
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI-AGT--EVELECCCF---NFSSRKTY 797 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi-~gt--evak~aaDi---nf~si~~~ 797 (799)
.-+-..+++. | +.++||||..+|.-+-++|++--..-. .+. +-....+|. |+..+.++
T Consensus 153 ~~~~~~~~~~-g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 153 RVYELAEQAL-GLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp HHHHHHHHHH-TSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHHHHHh-CCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 2333333333 3 579999999999999999987643221 111 112233555 77777654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=90.72 E-value=0.6 Score=44.81 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=31.2
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCC---CHHHHHHHHHHcCCccC
Q 003740 663 PGVKESVAICRSAGITVRMVTGD---NINTAKAIARECGILTD 702 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD---~~~tA~aiA~~~GI~~~ 702 (799)
|++.++++.|++.|++++++|+. .........+++|+...
T Consensus 26 ~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~ 68 (261)
T d1vjra_ 26 PGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 68 (261)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCC
T ss_pred chHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccc
Confidence 79999999999999999999954 45555555667787543
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.71 E-value=0.0047 Score=49.58 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=50.7
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhh
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE 102 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 102 (799)
..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+...+...++.+||.+...+
T Consensus 21 ~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~--~~~~~~i~~~I~~~Gy~a~~~~ 78 (84)
T d1q8la_ 21 HSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPH--LISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp CSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTT--TCCHHHHHHHHHHTTCCEECSC
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCCEEceeeccc--ccCHHHHHHHHHHhCCccEEcC
Confidence 368888999999999999999999999999999876 5677888999999999876544
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Probab=90.63 E-value=0.0045 Score=48.08 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=49.4
Q ss_pred ccccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 003740 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (799)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (799)
+..|..+.|+.+.+.+++..++||+...++.+.|++. ..+..++...+++.||.+..
T Consensus 14 C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~a~v 70 (72)
T d1osda_ 14 CSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDA--KTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp STTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETT--TCCHHHHHHHHHHTTCCCEE
T ss_pred cHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCC--CCCHHHHHHHHHhcCCCeEe
Confidence 3467788899999999999999999999999999876 56778899999999998764
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Probab=90.50 E-value=0.0057 Score=47.00 Aligned_cols=55 Identities=11% Similarity=0.172 Sum_probs=48.1
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (799)
..|..+.|+.+.+.+++..+++++...++.+.|++. ..+..++...++..||++.
T Consensus 14 ~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~~~ 68 (69)
T d2qifa1 14 QHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDAD--KVSVKDIADAIEDQGYDVA 68 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CCCHHHHHHHHHHhCCccc
Confidence 357778899999999999999999999999999866 5677889999999999864
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=90.47 E-value=0.083 Score=51.15 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=30.0
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc
Q 003740 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 697 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~ 697 (799)
|++.++|+.|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 88999999999999999999988777777766654
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.21 E-value=1 Score=37.32 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=53.8
Q ss_pred cCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEE--EEcCchHHHHHhcccccccCCeE
Q 003740 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRV--HCKGASEIILAACDKFLNSNGEV 601 (799)
Q Consensus 524 ~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~--~~KGa~e~il~~c~~~~~~~g~~ 601 (799)
+.||..+|+++++.+.+.+.... ..| ...+|.++.. ++-|.++.+-...-
T Consensus 26 S~HPlA~AIv~~a~~~~~~~~~~---------~~~----------~~~~G~Gi~g~~v~vG~~~~~~~~~~--------- 77 (113)
T d2b8ea2 26 SEHPIAEAIVKKALEHGIELGEP---------EKV----------EVIAGEGVVADGILVGNKRLMEDFGV--------- 77 (113)
T ss_dssp CCSHHHHHHHHHHHTTTCCCCCC---------SCE----------EEETTTEEEETTEEEECHHHHHHTTC---------
T ss_pred CCCchHHHHHHHHHHhcCCCCcc---------ccc----------eeeccceEEeEEEEECcHHHHHhcCC---------
Confidence 88999999999998776542210 111 1234444432 23388776544321
Q ss_pred eeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecc
Q 003740 602 VPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI 657 (799)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~ 657 (799)
.+++ .+.+.++.+..+|..++.++ .|..++|++++
T Consensus 78 -~~~~----~~~~~~~~~~~~G~T~v~va----------------~d~~~~G~ial 112 (113)
T d2b8ea2 78 -AVSN----EVELALEKLEREAKTAVIVA----------------RNGRVEGIIAV 112 (113)
T ss_dssp -CCCH----HHHHHHHHHHTTTCEEEEEE----------------ETTEEEEEEEE
T ss_pred -CCCH----HHHHHHHHHHhCCCeEEEEE----------------ECCEEEEEEEE
Confidence 2222 45677888899999998887 45678898876
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.95 E-value=0.0047 Score=47.99 Aligned_cols=56 Identities=7% Similarity=0.164 Sum_probs=48.4
Q ss_pred ccccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 003740 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (799)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (799)
+..|....|+.+.+.+++..++||+.+.++.+.|++. .+..++...++.+||.+..
T Consensus 13 C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~---~~~~~i~~~i~~~Gy~a~~ 68 (72)
T d2ggpb1 13 CSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE---VTADSIKEIIEDCGFDCEI 68 (72)
T ss_dssp SSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSS---CCHHHHHHHHHHTTCCCEE
T ss_pred cHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC---CCHHHHHHHHHHhCCCeEE
Confidence 3467888899999999999999999999999999754 5667899999999998764
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.90 E-value=0.14 Score=47.51 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=60.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHH----HHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTA----KAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA----~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
.+.|++.++++.|++.|+++.++|+...... ...-...|+...-+.++.+.+.. ...|
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~------------------~~KP 160 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG------------------MVKP 160 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT------------------CCTT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccc------------------cchh
Confidence 3578999999999999999999997544332 22233344433223333333221 1122
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe-eeecC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMG 776 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV-Giamg 776 (799)
++.-+-+.++.. | .-++||||...|..+-++|++ +|.+.
T Consensus 161 -~~~~~~~~~~~~-~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 161 -EPQIYKFLLDTL-KASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp -CHHHHHHHHHHH-TCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred -HHHHHHHHhhhc-ccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 233333444433 4 567899999999999999999 66554
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=89.70 E-value=0.18 Score=47.40 Aligned_cols=25 Identities=36% Similarity=0.538 Sum_probs=22.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcC
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTG 684 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTG 684 (799)
.+-||+.++++.|+++|+++.++|.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 3569999999999999999999995
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=89.62 E-value=0.0038 Score=49.53 Aligned_cols=58 Identities=14% Similarity=0.150 Sum_probs=50.3
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhh
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE 102 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 102 (799)
..|....|+.+...+++.++.||+.+.++.+.|++. ..+..++...++.+||.+....
T Consensus 14 ~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~~~~~~ 71 (79)
T d1p6ta2 14 AACANRIEKRLNKIEGVANAPVNFALETVTVEYNPK--EASVSDLKEAVDKLGYKLKLKG 71 (79)
T ss_dssp SSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTT--TCCHHHHHHHHHHHTCCEEESC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCC--CCCHHHHHHHHHHHCCceEECC
Confidence 467778899999999999999999999999999776 5677889999999999876544
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=89.34 E-value=0.006 Score=47.33 Aligned_cols=53 Identities=11% Similarity=0.193 Sum_probs=46.9
Q ss_pred ccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCccc
Q 003740 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQI 98 (799)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 98 (799)
.|..+.|+.+.+.+++.+++|++.++++.+.|++. ..+..++...++++||.+
T Consensus 19 ~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~--~~~~~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 19 ACAARIEKGLKRMPGVTDANVNLATETVNVIYDPA--ETGTAAIQEKIEKLGYHV 71 (72)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTT--TSCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCC--CCCHHHHHHHHHHhCCcc
Confidence 67788899999999999999999999999999766 466778889999999975
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.51 E-value=0.0091 Score=47.17 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=49.5
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChh
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPD 101 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 101 (799)
..|....|+.+++.+++.+++||+.+.++.+.|++. ..+..++...++++||.+.+.
T Consensus 20 ~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~GY~~~~~ 76 (79)
T d1kvja_ 20 NSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPK--LQTPKTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp THHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhcCCCcEeC
Confidence 357778899999999999999999999999999766 577889999999999987654
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.89 E-value=0.0097 Score=46.22 Aligned_cols=56 Identities=7% Similarity=0.154 Sum_probs=48.0
Q ss_pred ccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhh
Q 003740 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDEL 103 (799)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 103 (799)
.|....|+.+.+.+++..+.||+.+.++.+.|++. ...++...+.++||.+.+.+.
T Consensus 16 ~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~----~~~~i~~~i~~~GY~v~~~~~ 71 (73)
T d1mwza_ 16 ACARKVENAVRQLAGVNQVQVLFATEKLVVDADND----IRAQVESALQKAGYSLRDEQA 71 (73)
T ss_dssp HHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC----CHHHHHHHHHHHTCCCCBCCS
T ss_pred HHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC----CHHHHHHHHHHcCCcccCCCC
Confidence 67888999999999999999999999999998543 345788899999999987653
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=85.32 E-value=0.59 Score=43.89 Aligned_cols=122 Identities=19% Similarity=0.278 Sum_probs=82.6
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhcc--------------------CHHHH-
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREK--------------------SDEEL- 720 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~--------------------~~~~~- 720 (799)
-||+.++++.++++ ....++|---.+-..++|+.+|+.. ...-+--++..+ +-+++
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~--e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~ 159 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG--ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 159 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS--EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred cCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc--eeecccccccccCCChHHHHHHHHHhhhccCccHHHHH
Confidence 48999999999987 7888999899999999999999952 122222222211 11222
Q ss_pred ------------hhhcCCceEEEecCcccHHHHHHHHHHhCC-CEEEEEcCCccCHHhhhcCCe--eeecCCCCCHHHHH
Q 003740 721 ------------SKLIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADI--GLAMGIAGTEVELE 785 (799)
Q Consensus 721 ------------~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdV--Giamgi~gtevak~ 785 (799)
.+++..++..+. ..|..+++..-...| ..-+.|||.+.|..+|+.|.= |+|+.-+|-+=|..
T Consensus 160 e~~d~~f~~~e~~~i~e~Vk~VGg---g~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~ 236 (308)
T d1y8aa1 160 RKLDELFSRSEVRKIVESVKAVGA---GEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALK 236 (308)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCH---HHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHT
T ss_pred HHHHHHhccchHhhHHhhhcccCC---chhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccc
Confidence 222333443332 566666665433313 334899999999999999843 66666699999999
Q ss_pred hcCC
Q 003740 786 CCCF 789 (799)
Q Consensus 786 aaDi 789 (799)
.||+
T Consensus 237 eA~V 240 (308)
T d1y8aa1 237 HADV 240 (308)
T ss_dssp TCSE
T ss_pred ccce
Confidence 9998
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=83.19 E-value=0.46 Score=45.47 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=29.5
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHHcCCcc
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILT 701 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~---~tA~aiA~~~GI~~ 701 (799)
=|++.++|+.|+++|++++.+|+... ......=+++|+.-
T Consensus 21 i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 21 VPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp CTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred CccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 37899999999999999999996543 33333344578743
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=82.59 E-value=0.38 Score=44.71 Aligned_cols=91 Identities=12% Similarity=0.161 Sum_probs=60.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-eeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.+.|++.+.++.|+. +..++|+-....+..+-+.+|+..... .+..+.+.. ..+..|.-
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~~~~KP~~- 144 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLG----------------ADRVKPKP- 144 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHC----------------TTCCTTSS-
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeeccccccc----------------ccccccCH-
Confidence 357888888877764 456899999999999999999975321 122111110 01122322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV 771 (799)
.-+.+.+++. | +.+.|+||..+|..+-+.|++
T Consensus 145 ~~~~~~~~~l-~~~p~~~l~vgDs~~dv~aA~~aG~ 179 (222)
T d2fdra1 145 DIFLHGAAQF-GVSPDRVVVVEDSVHGIHGARAAGM 179 (222)
T ss_dssp HHHHHHHHHH-TCCGGGEEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHHhh-CCCCceEEEEcCCHHHHHHHHHcCC
Confidence 2344444444 4 679999999999999999996
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=81.95 E-value=0.61 Score=44.60 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=27.8
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARE 696 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~ 696 (799)
=|++.++|+.|++.|++++.+|+....+...+++.
T Consensus 20 i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~ 54 (253)
T d1wvia_ 20 IPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEM 54 (253)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 38999999999999999999998655544445543
|