Citrus Sinensis ID: 003784

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-----
MKRMLLKLLTFLSVASLLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLFLI
cHHHHHHHHHHHHHHHHHHccccccEEEEEccccEEEEEEEEEccccccEEEEEccccccccccEEEEccccccccHHHHHHHHcccccHHHHHHHHcccccccHHHHHHcccccEEEEEcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHHHHccccHHcccHHHHHHHHHccccccccccEEEEEEEcccccEEEEEEEEEcccccccccEEEccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccccEEEEEccccEEEEEEccccccccccccEEEEcccccccccEEEEEEEccccEEEEEEccccccccccccccEEEEEEccccccccccccccccccccEEEEEEEcccccEEEEEEEEEEEccEEEEcccccHHHHHcccccccccHHHHHHcccHHHHccccccccccccccccHHHHccccccccccccHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc
cHHHHHHHHHHHHHHHHHcccccccEEEEEccccEEEEEEEEcccccccEEEEEccccccccccEEEEcccHHHHHHHHHHHHcccccccEEEHHHHHccccccHHHHHHccccccEEEcccccccEEEEcEEEEEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHccccccccccEEEEEEEEccccEEEEEEEEEEHHccEEccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccEEEEEEEEHHHHHHHcHHHHHHcHHHHHHHHHHHcccHHHccEEEEEcHHHHcHHHHHHHHHHccccccEcccccccHHHHHHHHHHHHcccccHHHHHEEEEccccccccEEccccccccccccccEEEcccccccccccEEEEEccccccEEEEEEccccccccccccccEEEEcccccccccccEEEEEccEEEEEEEEEccccEEEEEEEEcccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccEEEEEEHcccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEc
MKRMLLKLLTFLSVASLLVShsqsavssvdLGSEWLKVAVVNlkpgqspiSIAINEmskrkspalvAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIdslylpfnvvedsrgavsfkidennnfSVEELLAMVLSYAVNLVDTHAKLAVKDFVisvppyfgqaERKGLMQAAELAGMNVLSLVNEHSGAALQygidkdfsnesrhvvfYDMGATTTYAALVYFSAYNAKVYGKtvsvnqfqvkdvrwdaelggqnMELRLVEYFADEFnkqvgngvdvrkspKAMAKLKKQVKRTKEILSantmapisveslyvdidfrssITRQKFEELCEDLWERSLVPLREvlnysglkmdEIYAVELIGGGTRVPKLQAKLQEYLGRteldrhldaDEAIVLGASLLAANLsdgiklnrklgmvdgssygfvveldgpelqkdesTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLayesedllppgatspvfAKYAVSGLAEASEkyssrnlsspikanLHFSLsrsgvlsldrADAVIEITEwvevpkknlIVENvassspnisaETAAQNMTVEAnenlqsesgtssasnstaeelsasnssaeepsktellTEKRlkkrtfrvplkivektvgpgaslskEALVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATkekfetsedyekvstsEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIgdpvffrfkeltarpasVEHAQKYLGQLQQIVNDwetnkpwlpkdrtdevlfli
MKRMLLKLLTFLSVASLLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQvgngvdvrkspkaMAKLKKQVKRTkeilsantmapisveslyVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVELdgpelqkdestrqlLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEItewvevpkknLIVENVASSSPNISAETAAQNMTVEANENLQSESGTSSASNSTAEElsasnssaeepsktelltekrlkkrtfrvplkivektvgpgaslskeaLVDAEAKleeldkkdadrrrtaelknnlegyiyatkekfetsedyekvstseerqsFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDwetnkpwlpkdrtdevlfli
MKRMLLKLLTFLSVASLLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEANENLQsesgtssasnstaeelsasnssaeepsktelltekrlkkrtFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLFLI
****LLKLLTFLSVASLLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAI*********ALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGV*********************ILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVEL*************************MFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAKYAVSGL*****************ANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVEN*******************************************************************FRVPLKIVE****************************************LEGYIYA*****************************AQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKD****VL***
***MLLKLLTFLSVASLLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVG*****RKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAV******************************************************************************KRLKKRTFRVPLKIVEKTVGPGASLS**********************RTAELKNNLEGYIYATKEKFE***************SFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLFLI
MKRMLLKLLTFLSVASLLVS*********DLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKA*********RTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAKYAVSGL***********LSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN**********************************LLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKF*******************EKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLFLI
*KRMLLKLLTFLSVASLLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLE**D*KDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLFLI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKRMLLKLLTFLSVASLLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGxxxxxxxxxxxxxxxxxxxxxDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLFLI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query795 2.2.26 [Sep-21-2011]
F4JMJ1867 Heat shock 70 kDa protein yes no 0.948 0.869 0.727 0.0
Q7ZUW2 980 Hypoxia up-regulated prot yes no 0.929 0.754 0.334 4e-98
Q5ZLK7 1002 Hypoxia up-regulated prot yes no 0.919 0.729 0.320 5e-91
Q566I3646 Hypoxia up-regulated prot N/A no 0.665 0.818 0.376 7e-91
Q556U6 926 Luminal-binding protein 1 yes no 0.879 0.754 0.305 2e-90
Q0VA61643 Hypoxia up-regulated prot no no 0.664 0.821 0.363 2e-86
Q9JKR6 999 Hypoxia up-regulated prot yes no 0.635 0.505 0.376 5e-86
Q63617 999 Hypoxia up-regulated prot yes no 0.635 0.505 0.374 3e-85
Q60432 999 Hypoxia up-regulated prot yes no 0.638 0.508 0.376 6e-85
Q9Y4L1 999 Hypoxia up-regulated prot yes no 0.635 0.505 0.366 3e-83
>sp|F4JMJ1|HSP7R_ARATH Heat shock 70 kDa protein 17 OS=Arabidopsis thaliana GN=HSP70-17 PE=2 SV=1 Back     alignment and function desciption
 Score = 1164 bits (3010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/772 (72%), Positives = 670/772 (86%), Gaps = 18/772 (2%)

Query: 22  SQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASG 81
           S+SAV SVDLGSEW+KVAVVNLK GQSPIS+AINEMSKRKSPALVAF    RLLGEEA+G
Sbjct: 22  SESAVLSVDLGSEWVKVAVVNLKRGQSPISVAINEMSKRKSPALVAFQSGDRLLGEEAAG 81

Query: 82  IIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNN-FSVEE 140
           I ARYP++VYSQLRDM+GKPFK VK  IDS+YLPF++VEDSRGAV  KID+ +  +SVEE
Sbjct: 82  ITARYPNKVYSQLRDMVGKPFKHVKDFIDSVYLPFDIVEDSRGAVGIKIDDGSTVYSVEE 141

Query: 141 LLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG 200
           LLAM+L YA NL + HAK+ VKD V+SVPPYFGQAER+GL+QA++LAG+NVLSLVNEHSG
Sbjct: 142 LLAMILGYASNLAEFHAKIPVKDMVVSVPPYFGQAERRGLIQASQLAGVNVLSLVNEHSG 201

Query: 201 AALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260
           AALQYGIDKDF+N SRHV+FYDMG+++TYAALVY+SAY+ K YGKTVSVNQFQVKDVRWD
Sbjct: 202 AALQYGIDKDFANGSRHVIFYDMGSSSTYAALVYYSAYSEKEYGKTVSVNQFQVKDVRWD 261

Query: 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPIS 320
             LGGQ+ME+RLVE+FADEFNKQ+GNGVDVRK PKAMAKLKKQVKRTKEILSANT APIS
Sbjct: 262 LGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAAPIS 321

Query: 321 VESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRV 380
           VESL+ D DFRS+ITR+KFEELC+DLWERSL PL++VL +SGLK+D+I AVELIGG TRV
Sbjct: 322 VESLHDDRDFRSTITREKFEELCKDLWERSLTPLKDVLKHSGLKIDDISAVELIGGATRV 381

Query: 381 PKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVE 440
           PKLQ+ +QE++G+ +LD+HLDADEAIVLG++L AANLSDGIKL R+LG+VDGS YGF+VE
Sbjct: 382 PKLQSTIQEFIGKQQLDKHLDADEAIVLGSALHAANLSDGIKLKRRLGIVDGSPYGFLVE 441

Query: 441 LDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAK 500
           L+GP ++KDEST+Q L PRMKKLPSKMFRS +  KDF+VSLAYESE +LPPG TSPVFA+
Sbjct: 442 LEGPNVKKDESTKQQLVPRMKKLPSKMFRSFVLDKDFDVSLAYESEGILPPGTTSPVFAQ 501

Query: 501 YAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIV 560
           Y+VSGLA+ASEKYSSRNLS+PIKANLHFSLSRSG+LSLDR DAVIEITEWV+VPKKN+ +
Sbjct: 502 YSVSGLADASEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIEITEWVDVPKKNVTI 561

Query: 561 E-NVASSSPNISAETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTEL 619
           + N  +S+ N + E + +N      E+LQ++     A NST     ASN++AEEP+   L
Sbjct: 562 DSNTTTSTGNATDENSQEN-----KEDLQTD-----AENST-----ASNTTAEEPAVASL 606

Query: 620 LTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKKDADRRRTAELKNNL 679
            TEK+LKKRTFR+PLK+VEKTVGPGA  SKE+L +A+ KLE LDKKD +RRRTAELKNNL
Sbjct: 607 GTEKKLKKRTFRIPLKVVEKTVGPGAPFSKESLAEAKIKLEALDKKDRERRRTAELKNNL 666

Query: 680 EGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLK 739
           E YIYATKEK ET E +EK+ST EER++FVEKLDE Q+WLY DGEDA A EF++RLD LK
Sbjct: 667 ESYIYATKEKLETPE-FEKISTQEERKAFVEKLDEVQDWLYMDGEDANATEFEKRLDSLK 725

Query: 740 AIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEV 791
           AIG P+ FR +ELTARP ++E+A+KYL +L++I+ +WETNK WLPK++ DEV
Sbjct: 726 AIGSPISFRSEELTARPVAIEYARKYLTELKEIIKEWETNKTWLPKEKIDEV 777

Arabidopsis thaliana (taxid: 3702)
>sp|Q7ZUW2|HYOU1_DANRE Hypoxia up-regulated protein 1 OS=Danio rerio GN=hyou1 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZLK7|HYOU1_CHICK Hypoxia up-regulated protein 1 OS=Gallus gallus GN=HYOU1 PE=2 SV=1 Back     alignment and function description
>sp|Q566I3|HYOU1_XENLA Hypoxia up-regulated protein 1 (Fragment) OS=Xenopus laevis GN=hyou1 PE=1 SV=2 Back     alignment and function description
>sp|Q556U6|BIP1_DICDI Luminal-binding protein 1 OS=Dictyostelium discoideum GN=bip1-1 PE=3 SV=1 Back     alignment and function description
>sp|Q0VA61|HYOU1_XENTR Hypoxia up-regulated protein 1 (Fragment) OS=Xenopus tropicalis GN=hyou1 PE=2 SV=2 Back     alignment and function description
>sp|Q9JKR6|HYOU1_MOUSE Hypoxia up-regulated protein 1 OS=Mus musculus GN=Hyou1 PE=1 SV=1 Back     alignment and function description
>sp|Q63617|HYOU1_RAT Hypoxia up-regulated protein 1 OS=Rattus norvegicus GN=Hyou1 PE=1 SV=1 Back     alignment and function description
>sp|Q60432|HYOU1_CRIGR Hypoxia up-regulated protein 1 OS=Cricetulus griseus GN=HYOU1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y4L1|HYOU1_HUMAN Hypoxia up-regulated protein 1 OS=Homo sapiens GN=HYOU1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query795
255559152895 Heat shock 70 kDa protein, putative [Ric 0.955 0.849 0.760 0.0
224089829 899 predicted protein [Populus trichocarpa] 0.955 0.845 0.772 0.0
359483029 983 PREDICTED: hypoxia up-regulated protein 0.973 0.787 0.757 0.0
297741947 1041 unnamed protein product [Vitis vinifera] 0.955 0.730 0.765 0.0
224137428881 predicted protein [Populus trichocarpa] 0.955 0.862 0.756 0.0
225430111895 PREDICTED: hypoxia up-regulated protein 0.977 0.868 0.744 0.0
356547531891 PREDICTED: hypoxia up-regulated protein 0.971 0.866 0.734 0.0
356575100893 PREDICTED: hypoxia up-regulated protein 0.979 0.872 0.721 0.0
449463613 898 PREDICTED: heat shock 70 kDa protein 17- 0.979 0.867 0.727 0.0
449505839 915 PREDICTED: heat shock 70 kDa protein 17- 0.961 0.834 0.735 0.0
>gi|255559152|ref|XP_002520598.1| Heat shock 70 kDa protein, putative [Ricinus communis] gi|223540258|gb|EEF41831.1| Heat shock 70 kDa protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/771 (76%), Positives = 678/771 (87%), Gaps = 11/771 (1%)

Query: 22  SQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASG 81
           S+SAVSS+DLGSEW+KVAVVNLKPGQ+PISIAINEMSKRKSPALVAFH  TRLLGEEA+G
Sbjct: 25  SESAVSSIDLGSEWVKVAVVNLKPGQTPISIAINEMSKRKSPALVAFHSGTRLLGEEAAG 84

Query: 82  IIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDEN-NNFSVEE 140
           I ARYP +VYS LRD+IGK +  VK  +DS+YLPF++VEDSRGA++ +ID+N   FSVEE
Sbjct: 85  ITARYPEKVYSHLRDLIGKSYSHVKSFLDSMYLPFDIVEDSRGAIAVQIDDNLTVFSVEE 144

Query: 141 LLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG 200
           L+AM+LSYA+NL + H+K+ VKD VISVPPYFGQAER+GL+QAA+LAG+NVLSL+NEHSG
Sbjct: 145 LVAMILSYAMNLAEFHSKVVVKDAVISVPPYFGQAERRGLVQAAQLAGINVLSLINEHSG 204

Query: 201 AALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260
           AALQYGIDKDFSN SR+V+FYDMG++TTYAALVY+SAYNAK +GKTVS+NQFQVKDVRWD
Sbjct: 205 AALQYGIDKDFSNASRYVIFYDMGSSTTYAALVYYSAYNAKEFGKTVSINQFQVKDVRWD 264

Query: 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPIS 320
           AELGGQ ME RLVEYFADEFNKQVGNGVDVR SPKAMAKLKKQVKRTKEILSAN+MAPIS
Sbjct: 265 AELGGQYMEARLVEYFADEFNKQVGNGVDVRTSPKAMAKLKKQVKRTKEILSANSMAPIS 324

Query: 321 VESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRV 380
           VESLY D DFRS+ITR KFEELCEDLW+RSL PL++VL +SGLK+DE++A+ELIGG TRV
Sbjct: 325 VESLYDDRDFRSTITRDKFEELCEDLWDRSLSPLKDVLKHSGLKVDELHAIELIGGATRV 384

Query: 381 PKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVE 440
           PKL+AK+QE+LGR+ELD+HLDADEA VLGA+L AANLSDGIKLNRKLGM+DGSSYGFVVE
Sbjct: 385 PKLKAKIQEFLGRSELDKHLDADEATVLGAALHAANLSDGIKLNRKLGMIDGSSYGFVVE 444

Query: 441 LDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSPVFAK 500
           LDG  L KDESTRQLL PRMKKLPSKMFRS+IH KDFEVSLAYESE LLPPG  SPVFAK
Sbjct: 445 LDGRNLLKDESTRQLLVPRMKKLPSKMFRSLIHDKDFEVSLAYESEGLLPPGTVSPVFAK 504

Query: 501 YAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIV 560
           YAVSG+ +ASEKYSSRNLSSPIKANLHFSLSRSG+LSLDRADAV+EI+EWVEVPK+N  +
Sbjct: 505 YAVSGVTDASEKYSSRNLSSPIKANLHFSLSRSGILSLDRADAVVEISEWVEVPKRNQSI 564

Query: 561 ENVASSSPNISAETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELL 620
            N  +SSPN+S    A+N + E+ E+L S+ G            +ASN + EEP   EL 
Sbjct: 565 ANTTASSPNMSVNPGAKNTSEESTESLHSDGGIG----------NASNPNIEEPDAIELG 614

Query: 621 TEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKKDADRRRTAELKNNLE 680
           TEK+LKKRTFR+PLKI++KT GPG  LS E+  +A+ KLE LDKKDA+RRRTAELKNNLE
Sbjct: 615 TEKKLKKRTFRIPLKILDKTAGPGMPLSGESQGEAKLKLEALDKKDAERRRTAELKNNLE 674

Query: 681 GYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKA 740
           GYIY+TK+K ETSE +EK+S+ +ER+SF+EKLDE QEWLYTDGEDATA EFQ+RLD LKA
Sbjct: 675 GYIYSTKDKLETSEKFEKISSDDERKSFIEKLDEVQEWLYTDGEDATATEFQDRLDSLKA 734

Query: 741 IGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEV 791
            GDP+FFR+ ELTARPA++E A+KYL +LQQIV  WETNKPWLPK+R DEV
Sbjct: 735 TGDPIFFRYNELTARPAAMELARKYLSELQQIVQSWETNKPWLPKNRIDEV 785

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224089829|ref|XP_002308826.1| predicted protein [Populus trichocarpa] gi|222854802|gb|EEE92349.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359483029|ref|XP_002272000.2| PREDICTED: hypoxia up-regulated protein 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297741947|emb|CBI33392.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224137428|ref|XP_002322555.1| predicted protein [Populus trichocarpa] gi|222867185|gb|EEF04316.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225430111|ref|XP_002281944.1| PREDICTED: hypoxia up-regulated protein 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356547531|ref|XP_003542165.1| PREDICTED: hypoxia up-regulated protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356575100|ref|XP_003555680.1| PREDICTED: hypoxia up-regulated protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|449463613|ref|XP_004149526.1| PREDICTED: heat shock 70 kDa protein 17-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449505839|ref|XP_004162582.1| PREDICTED: heat shock 70 kDa protein 17-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query795
TAIR|locus:2129021867 AT4G16660 [Arabidopsis thalian 0.974 0.893 0.691 2.1e-290
ZFIN|ZDB-GENE-030131-5344 980 hyou1 "hypoxia up-regulated 1" 0.714 0.579 0.367 3.7e-99
UNIPROTKB|F1NY05 986 HYOU1 "Hypoxia up-regulated pr 0.703 0.566 0.368 2.6e-98
MGI|MGI:108030 999 Hyou1 "hypoxia up-regulated 1" 0.670 0.533 0.371 1.8e-97
DICTYBASE|DDB_G0273813 926 DDB_G0273813 "heat shock prote 0.513 0.440 0.375 5.5e-97
DICTYBASE|DDB_G0273093 926 DDB_G0273093 "heat shock prote 0.513 0.440 0.375 5.5e-97
UNIPROTKB|F1LN18 999 Hyou1 "Hypoxia up-regulated pr 0.669 0.532 0.372 7.7e-97
UNIPROTKB|Q5ZLK7 1002 HYOU1 "Hypoxia up-regulated pr 0.703 0.557 0.365 1.3e-96
RGD|621146 999 Hyou1 "hypoxia up-regulated 1" 0.669 0.532 0.372 1.6e-96
UNIPROTKB|F1NJZ5 980 HYOU1 "Hypoxia up-regulated pr 0.683 0.554 0.369 5.4e-96
TAIR|locus:2129021 AT4G16660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2789 (986.8 bits), Expect = 2.1e-290, P = 2.1e-290
 Identities = 548/793 (69%), Positives = 655/793 (82%)

Query:     1 MKRMLLKLLTFLSVASLLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKR 60
             M ++   L+  LS+ SL+   S+SAV SVDLGSEW+KVAVVNLK GQSPIS+AINEMSKR
Sbjct:     1 MGKIFSWLVVLLSLISLVPVPSESAVLSVDLGSEWVKVAVVNLKRGQSPISVAINEMSKR 60

Query:    61 KSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVE 120
             KSPALVAF    RLLGEEA+GI ARYP++VYSQLRDM+GKPFK VK  IDS+YLPF++VE
Sbjct:    61 KSPALVAFQSGDRLLGEEAAGITARYPNKVYSQLRDMVGKPFKHVKDFIDSVYLPFDIVE 120

Query:   121 DSRGAVSFKIDENNN-FSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKG 179
             DSRGAV  KID+ +  +SVEELLAM+L YA NL + HAK+ VKD V+SVPPYFGQAER+G
Sbjct:   121 DSRGAVGIKIDDGSTVYSVEELLAMILGYASNLAEFHAKIPVKDMVVSVPPYFGQAERRG 180

Query:   180 LMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYN 239
             L+QA++LAG+NVLSLVNEHSGAALQYGIDKDF+N SRHV+FYDMG+++TYAALVY+SAY+
Sbjct:   181 LIQASQLAGVNVLSLVNEHSGAALQYGIDKDFANGSRHVIFYDMGSSSTYAALVYYSAYS 240

Query:   240 AKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAK 299
              K YGKTVSVNQFQVKDVRWD  LGGQ+ME+RLVE+FADEFNKQ+GNGVDVRK PKAMAK
Sbjct:   241 EKEYGKTVSVNQFQVKDVRWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAK 300

Query:   300 LKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLN 359
             LKKQVKRTKEILSANT APISVESL+ D DFRS+ITR+KFEELC+DLWERSL PL++VL 
Sbjct:   301 LKKQVKRTKEILSANTAAPISVESLHDDRDFRSTITREKFEELCKDLWERSLTPLKDVLK 360

Query:   360 YSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419
             +SGLK+D+I AVELIGG TRVPKLQ+ +QE++G+ +LD+HLDADEAIVLG++L AANLSD
Sbjct:   361 HSGLKIDDISAVELIGGATRVPKLQSTIQEFIGKQQLDKHLDADEAIVLGSALHAANLSD 420

Query:   420 GIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEV 479
             GIKL R+LG+VDGS YGF+VEL+GP ++KDEST+Q L PRMKKLPSKMFRS +  KDF+V
Sbjct:   421 GIKLKRRLGIVDGSPYGFLVELEGPNVKKDESTKQQLVPRMKKLPSKMFRSFVLDKDFDV 480

Query:   480 SLAYESEDLLPPGATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLD 539
             SLAYESE +LPPG TSPVFA+Y+VSGLA+ASEKYSSRNLS+PIKANLHFSLSRSG+LSLD
Sbjct:   481 SLAYESEGILPPGTTSPVFAQYSVSGLADASEKYSSRNLSAPIKANLHFSLSRSGILSLD 540

Query:   540 RADAVIEITEWVEVPKKNLIVE-NVASSSPNISAETAAQNMTVEANENLQXXXXXXXXXX 598
             R DAVIEITEWV+VPKKN+ ++ N  +S+ N + E + +N      E+LQ          
Sbjct:   541 RGDAVIEITEWVDVPKKNVTIDSNTTTSTGNATDENSQEN-----KEDLQTDAENSTASN 595

Query:   599 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRVPLKIVEKTVGPGASLSKEALVDAEAK 658
                                            FR+PLK+VEKTVGPGA  SKE+L +A+ K
Sbjct:   596 TTAEEPAVASLGTEKKLKKRT----------FRIPLKVVEKTVGPGAPFSKESLAEAKIK 645

Query:   659 LEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEW 718
             LE LDKKD +RRRTAELKNNLE YIYATKEK ET E +EK+ST EER++FVEKLDE Q+W
Sbjct:   646 LEALDKKDRERRRTAELKNNLESYIYATKEKLETPE-FEKISTQEERKAFVEKLDEVQDW 704

Query:   719 LYTDGEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWET 778
             LY DGEDA A EF++RLD LKAIG P+ FR +ELTARP ++E+A+KYL +L++I+ +WET
Sbjct:   705 LYMDGEDANATEFEKRLDSLKAIGSPISFRSEELTARPVAIEYARKYLTELKEIIKEWET 764

Query:   779 NKPWLPKDRTDEV 791
             NK WLPK++ DEV
Sbjct:   765 NKTWLPKEKIDEV 777
GO:0005524 "ATP binding" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006457 "protein folding" evidence=RCA
GO:0006857 "oligopeptide transport" evidence=RCA
GO:0009408 "response to heat" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009644 "response to high light intensity" evidence=RCA
GO:0030244 "cellulose biosynthetic process" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0042542 "response to hydrogen peroxide" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
ZFIN|ZDB-GENE-030131-5344 hyou1 "hypoxia up-regulated 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NY05 HYOU1 "Hypoxia up-regulated protein 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:108030 Hyou1 "hypoxia up-regulated 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0273813 DDB_G0273813 "heat shock protein 70 (Hsp70) family member" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0273093 DDB_G0273093 "heat shock protein 70 (Hsp70) family member" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1LN18 Hyou1 "Hypoxia up-regulated protein 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZLK7 HYOU1 "Hypoxia up-regulated protein 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|621146 Hyou1 "hypoxia up-regulated 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJZ5 HYOU1 "Hypoxia up-regulated protein 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
F4JMJ1HSP7R_ARATHNo assigned EC number0.72790.94840.8696yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00006855001
SubName- Full=Chromosome undetermined scaffold_178, whole genome shotgun sequence; (899 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00028084001
SubName- Full=Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotg [...] (345 aa)
  •  •  0.871
GSVIVG00023179001
SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (467 aa)
  •• •  0.834
GSVIVG00006687001
SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (667 aa)
  •  • •0.818
GSVIVG00001482001
SubName- Full=Chromosome chr3 scaffold_117, whole genome shotgun sequence; (103 aa)
  •     0.501
GSVIVG00033870001
SubName- Full=Chromosome undetermined scaffold_70, whole genome shotgun sequence; (133 aa)
  •     0.495
GSVIVG00017184001
SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (112 aa)
  •     0.492
GSVIVG00027610001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (105 aa)
  •     0.490
GSVIVG00026852001
SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (92 aa)
  •     0.486
GSVIVG00038657001
SubName- Full=Putative uncharacterized protein (Chromosome chr18 scaffold_96, whole genome shot [...] (253 aa)
  •     0.476
GSVIVG00022356001
SubName- Full=Chromosome chr14 scaffold_26, whole genome shotgun sequence; (166 aa)
  •     0.472

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query795
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 1e-173
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 1e-106
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 2e-83
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 1e-78
pfam00012598 pfam00012, HSP70, Hsp70 protein 1e-75
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 1e-68
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 7e-68
COG0443579 COG0443, DnaK, Molecular chaperone [Posttranslatio 8e-68
PTZ00009653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 9e-66
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 2e-58
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 5e-58
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 2e-54
TIGR02350595 TIGR02350, prok_dnaK, chaperone protein DnaK 1e-52
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 1e-52
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 8e-52
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 8e-47
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 2e-45
PRK00290627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 3e-45
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 1e-43
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 2e-43
PRK13410668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 2e-40
PLN03184673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 1e-39
PRK13411653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 6e-39
PTZ00400663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 7e-39
PTZ00186657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 8e-39
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 1e-38
TIGR01991599 TIGR01991, HscA, Fe-S protein assembly chaperone H 5e-38
CHL00094621 CHL00094, dnaK, heat shock protein 70 2e-37
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 6e-37
PRK05183616 PRK05183, hscA, chaperone protein HscA; Provisiona 7e-33
PRK01433595 PRK01433, hscA, chaperone protein HscA; Provisiona 2e-21
pfam00012598 pfam00012, HSP70, Hsp70 protein 2e-08
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 3e-05
PTZ00009653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 1e-04
COG0443579 COG0443, DnaK, Molecular chaperone [Posttranslatio 0.001
PRK00290627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 0.001
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information 
 Score =  504 bits (1300), Expect = e-173
 Identities = 201/392 (51%), Positives = 278/392 (70%), Gaps = 9/392 (2%)

Query: 28  SVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYP 87
            +DLGSEW+KVA+V  KPG  P  I +NE SKRK+P+ VAF    RL G +AS + AR+P
Sbjct: 2   GIDLGSEWIKVALV--KPG-VPFEIVLNEESKRKTPSAVAFKGGERLFGSDASSLAARFP 58

Query: 88  HRVYSQLRDMIGKP--FKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMV 145
            +VY  L+D++GKP     V        LP+ VV++SRG V+FKI +   +SVEEL+AM+
Sbjct: 59  QQVYLHLKDLLGKPADDPSVSLYQSRHPLPYLVVDESRGTVAFKISDGEEYSVEELVAMI 118

Query: 146 LSYAVNLVDTHAKLA-VKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQ 204
           L+YA  L + HAK A VKD VI+VPPYF QA+R+ L+ AAELAG+NVL+LVN+ + AAL 
Sbjct: 119 LNYAKKLAEEHAKEAPVKDVVITVPPYFTQAQRQALLDAAELAGLNVLALVNDGTAAALN 178

Query: 205 YGIDKDFS-NESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAEL 263
           Y +D+ F  N+ ++V+FYDMGA +T A +V FS    K   K+ +V Q +V  V WD  L
Sbjct: 179 YALDRRFENNKPQYVLFYDMGAGSTTATVVEFSPVEEK--EKSKTVPQIEVLGVGWDRTL 236

Query: 264 GGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVES 323
           GG+  +LRL ++ A EF ++    VDVR +P+AMAKL K+  R KE+LSAN+ AP+S+ES
Sbjct: 237 GGREFDLRLADHLAKEFEEKHKAKVDVRTNPRAMAKLLKEANRAKEVLSANSEAPVSIES 296

Query: 324 LYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKL 383
           LY DIDF++ ITR +FEELC DL+ER++ P+++ L  +GL + +I +VELIGG TRVPK+
Sbjct: 297 LYDDIDFKTKITRAEFEELCADLFERAVAPIKKALESAGLTLKDIDSVELIGGATRVPKV 356

Query: 384 QAKLQEYLGRTELDRHLDADEAIVLGASLLAA 415
           Q +L E +G+ +L +HL+ADEA  +GA+  AA
Sbjct: 357 QEELSEAVGKKKLGKHLNADEAAAMGAAYYAA 388

This subgroup includes human HYOU1 (also known as human hypoxia up-regulated 1, GRP170; HSP12A; ORP150; GRP-170; ORP-150; the human HYOU1 gene maps to11q23.1-q23.3) and Saccharomyces cerevisiae Lhs1p (also known as Cer1p, SsI1). Mammalian HYOU1 functions as a nucleotide exchange factor (NEF) for HSPA5 (alos known as BiP, Grp78 or HspA5) and may also function as a HSPA5-independent chaperone. S. cerevisiae Lhs1p, does not have a detectable endogenous ATPase activity like canonical HSP70s, but functions as a NEF for Kar2p; it's interaction with Kar2p is stimulated by nucleotide-binding. In addition, Lhs1p has a nucleotide-independent holdase activity that prevents heat-induced aggregation of proteins in vitro. This subgroup belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family. HSP105/110s are believed to function generally as co-chaperones of HSP70 chaperones, acting as NEFs, to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 388
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 795
KOG0100663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
KOG0103727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
PTZ00009653 heat shock 70 kDa protein; Provisional 100.0
PRK13410668 molecular chaperone DnaK; Provisional 100.0
PRK13411653 molecular chaperone DnaK; Provisional 100.0
PTZ00400663 DnaK-type molecular chaperone; Provisional 100.0
PRK00290627 dnaK molecular chaperone DnaK; Provisional 100.0
PLN03184673 chloroplast Hsp70; Provisional 100.0
PTZ00186657 heat shock 70 kDa precursor protein; Provisional 100.0
TIGR02350595 prok_dnaK chaperone protein DnaK. Members of this 100.0
CHL00094621 dnaK heat shock protein 70 100.0
TIGR01991599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
KOG0101620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
PRK05183616 hscA chaperone protein HscA; Provisional 100.0
PF00012602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
PRK01433595 hscA chaperone protein HscA; Provisional 100.0
KOG0102640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
COG0443579 DnaK Molecular chaperone [Posttranslational modifi 100.0
PRK11678450 putative chaperone; Provisional 100.0
PRK13928336 rod shape-determining protein Mbl; Provisional 100.0
PRK13929335 rod-share determining protein MreBH; Provisional 100.0
PRK13927334 rod shape-determining protein MreB; Provisional 100.0
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 100.0
PRK13930335 rod shape-determining protein MreB; Provisional 100.0
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 99.97
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 99.96
COG1077342 MreB Actin-like ATPase involved in cell morphogene 99.95
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.94
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.88
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.84
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.68
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.6
PRK13917344 plasmid segregation protein ParM; Provisional 99.56
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.52
COG4820277 EutJ Ethanolamine utilization protein, possible ch 99.47
PTZ00280414 Actin-related protein 3; Provisional 99.37
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 99.3
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.29
PTZ00452375 actin; Provisional 99.14
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 99.14
PTZ00004378 actin-2; Provisional 99.1
PTZ00281376 actin; Provisional 99.1
PTZ00466380 actin-like protein; Provisional 99.06
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 99.02
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 98.83
COG5277444 Actin and related proteins [Cytoskeleton] 98.55
KOG0679426 consensus Actin-related protein - Arp4p/Act3p [Cyt 98.45
PRK10719475 eutA reactivating factor for ethanolamine ammonia 98.35
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 98.3
PF075201002 SrfB: Virulence factor SrfB; InterPro: IPR009216 T 98.27
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 98.04
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 97.99
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 97.83
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 97.74
KOG0676372 consensus Actin and related proteins [Cytoskeleton 97.73
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 97.71
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 97.59
PF06277473 EutA: Ethanolamine utilisation protein EutA; Inter 97.55
COG44571014 SrfB Uncharacterized protein conserved in bacteria 97.3
KOG0797618 consensus Actin-related protein [Cytoskeleton] 97.01
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 96.75
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 96.42
PRK13317277 pantothenate kinase; Provisional 96.28
KOG0677389 consensus Actin-related protein Arp2/3 complex, su 96.27
PF14574412 DUF4445: Domain of unknown function (DUF4445); PDB 95.85
PRK15027484 xylulokinase; Provisional 95.54
PLN02669556 xylulokinase 95.36
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 95.12
PF01968290 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr 94.92
KOG2517516 consensus Ribulose kinase and related carbohydrate 94.71
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 94.45
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 94.38
PRK00047498 glpK glycerol kinase; Provisional 94.35
TIGR01311493 glycerol_kin glycerol kinase. This model describes 94.19
PRK04123548 ribulokinase; Provisional 94.15
PLN02295512 glycerol kinase 94.14
PTZ00294504 glycerol kinase-like protein; Provisional 94.05
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 94.03
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 93.99
COG1069544 AraB Ribulose kinase [Energy production and conver 93.82
PRK10331470 L-fuculokinase; Provisional 93.78
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 93.56
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 93.51
PRK10854513 exopolyphosphatase; Provisional 93.29
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 93.11
PRK10640471 rhaB rhamnulokinase; Provisional 93.07
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 92.53
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 92.43
COG4819473 EutA Ethanolamine utilization protein, possible ch 92.25
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 92.21
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 91.06
PRK09557301 fructokinase; Reviewed 91.01
PTZ00107464 hexokinase; Provisional 90.67
PRK09698302 D-allose kinase; Provisional 89.85
KOG0680400 consensus Actin-related protein - Arp6p [Cytoskele 88.78
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 87.19
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 86.48
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 85.99
TIGR00744318 ROK_glcA_fam ROK family protein (putative glucokin 85.18
smart00842187 FtsA Cell division protein FtsA. FtsA is essential 84.63
PRK14878323 UGMP family protein; Provisional 84.4
COG0248492 GppA Exopolyphosphatase [Nucleotide transport and 84.21
PRK11031496 guanosine pentaphosphate phosphohydrolase; Provisi 83.98
COG1548330 Predicted transcriptional regulator/sugar kinase [ 83.38
PLN02666 1275 5-oxoprolinase 82.86
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 82.86
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 81.76
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 80.99
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=5e-122  Score=935.21  Aligned_cols=625  Identities=29%  Similarity=0.522  Sum_probs=571.4

Q ss_pred             CchhhHHHHHHHHHHHhh--hcC----------CCCcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEE
Q 003784            1 MKRMLLKLLTFLSVASLL--VSH----------SQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAF   68 (795)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~--~~~----------~~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~   68 (795)
                      ||+.+++.+.+++.++++  ...          ...+|||||||||||||+++  ++|  .++|+.|++|+|.+||+|+|
T Consensus         1 mk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gtvigIdLGTTYsCVgV~--kNg--rvEIiANdQGNRItPSyVaF   76 (663)
T KOG0100|consen    1 MKLSFLLAMLLFLAVLFFGCSEAASTEKEDEAEKLGTVIGIDLGTTYSCVGVY--KNG--RVEIIANDQGNRITPSYVAF   76 (663)
T ss_pred             CchHHHHHHHHHHHHHHhhhhhhhhhccccchhccceEEEEecCCceeeEEEE--eCC--eEEEEecCCCCccccceeee
Confidence            887776665555554333  211          24579999999999999999  777  68999999999999999999


Q ss_pred             eCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCChhhHhhHhhcCCCceEEECC-CCcEEEEeCCC--ccccHHHHHHHH
Q 003784           69 HESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDS-RGAVSFKIDEN--NNFSVEELLAMV  145 (795)
Q Consensus        69 ~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~eel~a~~  145 (795)
                      ++.+|++|+.|.+++..||++++++.|||||+.+.+.....+.++|||+++... +..+.+.+.+|  +.|+||++++|+
T Consensus        77 t~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~vq~Dik~~Pfkvv~k~~kp~i~v~v~~g~~K~FtPeEiSaMi  156 (663)
T KOG0100|consen   77 TDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKSVQKDIKFLPFKVVNKDGKPYIQVKVGGGETKVFTPEEISAMI  156 (663)
T ss_pred             ccchhhhhhHhhcccccCcccceechHHHhCcccCChhhhhhhhcCceEEEcCCCCccEEEEccCCcccccCHHHHHHHH
Confidence            999999999999999999999999999999997766555667889999999775 55666777655  789999999999


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHHHHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecC
Q 003784          146 LSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGA  225 (795)
Q Consensus       146 L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~Gg  225 (795)
                      |.++++.|+.++|.++.++|+||||||++.||+++++|..+|||+++++||||+|||++|++++  ..+..++||||+||
T Consensus       157 L~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKDAGtIAgLnV~RIiNePTaAAIAYGLDK--k~gEknilVfDLGG  234 (663)
T KOG0100|consen  157 LTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDK--KDGEKNILVFDLGG  234 (663)
T ss_pred             HHHHHHHHHHHhCCcccceEEecchhcchHHHhhhcccceeccceEEEeecCccHHHHHhcccc--cCCcceEEEEEcCC
Confidence            9999999999999999999999999999999999999999999999999999999999999987  45568999999999


Q ss_pred             ccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHH
Q 003784          226 TTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVK  305 (795)
Q Consensus       226 gT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e  305 (795)
                      ||||+|++            .+.+|.|+|+++.||.+|||.+||+++++|+.+.++++  ++.|++.+.+++.+|+++||
T Consensus       235 GTFDVSlL------------tIdnGVFeVlaTnGDThLGGEDFD~rvm~~fiklykkK--~gkDv~kdnkA~~KLrRe~E  300 (663)
T KOG0100|consen  235 GTFDVSLL------------TIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKK--HGKDVRKDNKAVQKLRREVE  300 (663)
T ss_pred             ceEEEEEE------------EEcCceEEEEecCCCcccCccchHHHHHHHHHHHHhhh--cCCccchhhHHHHHHHHHHH
Confidence            99999999            55699999999999999999999999999999999999  99999999999999999999


Q ss_pred             HHhhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHH
Q 003784          306 RTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQA  385 (795)
Q Consensus       306 ~~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~  385 (795)
                      +||+.||+..++.+.|++|++|.||+-++||..||++.-++|.....+++++|+.+++...+|+.|+|||||+|||.||+
T Consensus       301 kAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQq  380 (663)
T KOG0100|consen  301 KAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQ  380 (663)
T ss_pred             HHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHHHhhcCcccccCceEEEecCcccChhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCccCCCCCcchhhHhhHHHHHHHhcCCccccCcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCc
Q 003784          386 KLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPS  465 (795)
Q Consensus       386 ~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls~~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~  465 (795)
                      +|+++|++++.++.+|||||||+|||.+|..+|+.... .++.+.|++|..+||++.|+-|.       .||||++.+|+
T Consensus       381 llk~fF~GKepskGinPdEAVAYGAAVQaGvlsGee~t-~divLLDv~pLtlGIETvGGVMT-------klI~RNTviPT  452 (663)
T KOG0100|consen  381 LLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGEEDT-GDIVLLDVNPLTLGIETVGGVMT-------KLIPRNTVIPT  452 (663)
T ss_pred             HHHHHhCCCCccCCCChHHHHHhhhhhhhcccccccCc-CcEEEEeeccccceeeeecceee-------ccccCCcccCc
Confidence            99999988899999999999999999999999998888 89999999999999999999875       89999999999


Q ss_pred             ceEEeeeecc----cEEEEEEeecCCCCCCCCCCCceeEEEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeee
Q 003784          466 KMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRA  541 (795)
Q Consensus       466 ~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~  541 (795)
                      +++..|++..    .++|.+ |+|++++..  +|+.+|.|.++|||++|     +|  .| .|.|+|++|.||+|.|++.
T Consensus       453 kKSQvFsTa~DnQ~tV~I~v-yEGER~mtk--dn~lLGkFdltGipPAP-----RG--vp-qIEVtFevDangiL~VsAe  521 (663)
T KOG0100|consen  453 KKSQVFSTAQDNQPTVTIQV-YEGERPMTK--DNHLLGKFDLTGIPPAP-----RG--VP-QIEVTFEVDANGILQVSAE  521 (663)
T ss_pred             cccceeeecccCCceEEEEE-eeccccccc--cccccccccccCCCCCC-----CC--Cc-cEEEEEEEccCceEEEEee
Confidence            9999998853    478888 999999988  69999999999999998     55  78 9999999999999987532


Q ss_pred             eeEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhh
Q 003784          542 DAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLT  621 (795)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  621 (795)
                      +-                                .              +++                            
T Consensus       522 DK--------------------------------g--------------tg~----------------------------  527 (663)
T KOG0100|consen  522 DK--------------------------------G--------------TGK----------------------------  527 (663)
T ss_pred             cc--------------------------------C--------------CCC----------------------------
Confidence            20                                0              000                            


Q ss_pred             hcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCC
Q 003784          622 EKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVST  701 (795)
Q Consensus       622 ~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~  701 (795)
                               +-.|+|++.    ...||+++|++|++..++++.+|+...++.++||.||+|.|+|++.+.+.+.+...++
T Consensus       528 ---------~~kitItNd----~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dkekLg~Kl~  594 (663)
T KOG0100|consen  528 ---------KEKITITND----KGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDKEKLGGKLS  594 (663)
T ss_pred             ---------cceEEEecC----CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCchhHhcccCC
Confidence                     004677643    4579999999999999999999999999999999999999999999998777999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHhh
Q 003784          702 SEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKEL  752 (795)
Q Consensus       702 ~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~~~L~~~~~~i~~r~~e~  752 (795)
                      +++++.+...++++.+||+++ ++|++++|.+|+++|+.+++||+.+++..
T Consensus       595 ~edKe~~e~av~e~~eWL~~n-~~a~~Ee~~ek~kele~vv~PiisklY~~  644 (663)
T KOG0100|consen  595 DEDKETIEDAVEEALEWLESN-QDASKEEFKEKKKELEAVVQPIISKLYGG  644 (663)
T ss_pred             hhHHHHHHHHHHHHHHHHhhc-ccccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999999999 79999999999999999999999998774

>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>KOG0676 consensus Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] Back     alignment and domain information
>KOG0797 consensus Actin-related protein [Cytoskeleton] Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] Back     alignment and domain information
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09557 fructokinase; Reviewed Back     alignment and domain information
>PTZ00107 hexokinase; Provisional Back     alignment and domain information
>PRK09698 D-allose kinase; Provisional Back     alignment and domain information
>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>smart00842 FtsA Cell division protein FtsA Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02666 5-oxoprolinase Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query795
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 2e-59
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 3e-59
1yuw_A554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 3e-58
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 4e-58
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 5e-58
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 7e-58
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 8e-58
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 8e-58
3c7n_B554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 9e-58
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 9e-58
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 1e-57
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 1e-57
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 1e-57
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 1e-57
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 2e-57
3cqx_A386 Chaperone Complex Length = 386 2e-57
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 2e-57
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 2e-57
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-57
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 2e-57
1hpm_A386 How Potassium Affects The Activity Of The Molecular 3e-57
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 3e-57
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 3e-57
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 3e-57
2v7z_A543 Crystal Structure Of The 70-Kda Heat Shock Cognate 3e-57
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 4e-57
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 5e-57
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 6e-57
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 6e-57
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 7e-57
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 9e-57
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-56
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-56
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-56
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-56
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-56
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 2e-56
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-56
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-56
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 2e-56
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 2e-55
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 3e-55
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 2e-54
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 1e-53
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 8e-53
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 8e-53
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 9e-53
2qxl_A658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 1e-51
2qxl_A658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 7e-05
3c7n_A668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 2e-51
3c7n_A668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 6e-05
3d2f_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 2e-50
3d2f_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 7e-05
3d2e_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 2e-49
3d2e_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 2e-04
2kho_A605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 7e-42
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 6e-40
4b9q_A605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 1e-39
2v7y_A509 Crystal Structure Of The Molecular Chaperone Dnak F 3e-38
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 9e-28
4gni_A409 Structure Of The Ssz1 Atpase Bound To Atp And Magne 7e-21
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure 
Iteration: 1

 Score =  227 bits (579), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 216/394 (54%), Gaps = 21/394 (5%)
Query: 28  SVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYP 87
            +DLG+ +  V V         + I  N+   R +P+ VAF E+ RL+G+ A   +AR P
Sbjct: 23  GIDLGTTYSCVGVWR----NDTVDIVPNDQGNRTTPSYVAFTETERLIGDAAKNQVARNP 78
Query: 88  HRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKID---ENNNFSVEELLAM 144
                  + +IG+ F       D  + PF VV   +      ++   E   F  EE+ AM
Sbjct: 79  ENTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAM 138
Query: 145 VLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQ 204
           VL     + + +    +K+ V++VP YF  ++R+    A  +AG+NV+ ++NE + AA+ 
Sbjct: 139 VLQKMKEISEAYLGRQIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIA 198
Query: 205 YGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELG 264
           YG+DK  + E R+V+ +D+G  T   +L+            T+    F+VK    D  LG
Sbjct: 199 YGLDKKGTGE-RNVLIFDLGGGTFDVSLL------------TIEDGIFEVKATAGDTHLG 245
Query: 265 GQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESL 324
           G++ + RLVE+   +F K+   G+D+  + +A+ +L+ Q +R K  LS++T A I ++SL
Sbjct: 246 GEDFDNRLVEFCVQDF-KRKNRGMDLTTNARALRRLRTQCERAKRTLSSSTQATIELDSL 304
Query: 325 YVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQ 384
           Y  ID+  +I+R +FEELC D +  +L P+ +VL  +G+    ++ V L+GG TR+PK+Q
Sbjct: 305 YEGIDYSVAISRARFEELCADYFRATLAPVEKVLKDAGMDKRSVHDVVLVGGSTRIPKVQ 364
Query: 385 AKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418
           A +QE+    E  + ++ DEA+  GA++ AA L+
Sbjct: 365 ALIQEFFNGKEPCKAINPDEAVAYGAAVQAAILN 398
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State Length = 394 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query795
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 1e-99
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 1e-70
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 1e-69
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 1e-68
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 5e-49
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 2e-47
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 5e-47
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-11
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 3e-09
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 4e-09
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 3e-08
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 4e-07
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 1e-04
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
 Score =  322 bits (827), Expect = 1e-99
 Identities = 174/757 (22%), Positives = 302/757 (39%), Gaps = 121/757 (15%)

Query: 24  SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGII 83
           S    +DLG+    +AV         I I +NE+S R +P++V F    R LGE      
Sbjct: 2   STPFGLDLGNNNSVLAVAR----NRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQ 57

Query: 84  ARYPHRVYSQLRDMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKID---ENNNFSVEE 140
                   + L+ +IG  +       +S +    +VE        ++    E + FS  +
Sbjct: 58  TSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQ 117

Query: 141 LLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG 200
           L AM +    + V    K  + D  I+VPP++ + +R  +  AA +AG+N + +VN+ + 
Sbjct: 118 LAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTA 177

Query: 201 AALQYGIDK----DFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKD 256
           A + YGI K    +   + R V F D+G ++   +++                 Q +V  
Sbjct: 178 AGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIM------------AFKKGQLKVLG 225

Query: 257 VRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTM 316
              D   GG++ +L + E+FADEF  +    +D+R++PKA  ++    ++ K++LSANT 
Sbjct: 226 TACDKHFGGRDFDLAITEHFADEFKTK--YKIDIRENPKAYNRILTAAEKLKKVLSANTN 283

Query: 317 APISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGG 376
           AP SVES+  D+D  S ++R++ EEL + L ER   P+ + L  + L  +E+  VE+IGG
Sbjct: 284 APFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGG 343

Query: 377 GTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGIKLNRKLGMVDGSSYG 436
            TR+P L+  + E  G+  L   L+ DEAI  GA+ + A  S      R     D   Y 
Sbjct: 344 TTRIPTLKQSISEAFGK-PLSTTLNQDEAIAKGAAFICAIHS-PTLRVRPFKFEDIHPYS 401

Query: 437 FVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSP 496
                D     +D      + P     PS    ++    DF ++ +Y     LPP  T  
Sbjct: 402 VSYSWDKQVEDEDHME---VFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPN-TPE 457

Query: 497 VFAKYAVSGLA--EASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVP 554
             A + ++G+   E  +       S P+K  L      SG+                   
Sbjct: 458 QIANWEITGVQLPEGQD-------SVPVK--LKLRCDPSGLH------------------ 490

Query: 555 KKNLIVENVASSSPNISAETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEP 614
                   +  +      E  +   TV+ + +L   + T         EL       E  
Sbjct: 491 -------TIEEAYTIEDIEAGSDTKTVKKD-DLTIVAHTFGLDAKKLNELIEK----ENE 538

Query: 615 SKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKKDADRRRTAE 674
              +   +K + +                          D +  LEE             
Sbjct: 539 MLAQ---DKLVAET------------------------EDRKNTLEEY---------IYT 562

Query: 675 LKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQER 734
           L+  LE         F +  +  K+            L++A+EWLY +G D+   ++  +
Sbjct: 563 LRGKLEE----EYAPFASDAEKTKLQ---------GMLNKAEEWLYDEGFDSIKAKYIAK 609

Query: 735 LDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQ 771
            + L ++G+ +  R+            +++   Q+  
Sbjct: 610 YEELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAA 646
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Length = 120 Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Length = 113 Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Length = 113 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query795
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
4b9q_A605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 100.0
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 100.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 100.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 100.0
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 99.97
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 99.96
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 99.94
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.93
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.92
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.92
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.91
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 99.91
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.9
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 99.84
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 99.83
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 99.82
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 99.81
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 99.78
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.74
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 99.71
3js6_A355 Uncharacterized PARM protein; partition, segregati 99.7
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 99.48
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 99.46
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.36
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 99.35
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 99.32
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 99.08
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 99.04
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 99.02
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 98.99
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 98.92
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.43
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 97.83
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 96.45
2e2o_A299 Hexokinase; acetate and sugar kinases, HSP70, acti 96.28
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 96.14
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 95.93
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 95.78
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 95.72
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 95.66
4db3_A327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 95.58
3vov_A302 Glucokinase, hexokinase; ROK, sugar kinase, transf 95.43
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 95.35
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 95.3
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 95.14
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 95.12
4htl_A297 Beta-glucoside kinase; structural genomics, sugar 95.11
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 95.01
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 94.98
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 94.88
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 94.83
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 94.73
2qm1_A326 Glucokinase; alpha-beta structure, putative helix- 94.58
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 94.44
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 94.38
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 94.2
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 94.1
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 94.09
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 93.97
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 93.86
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 93.22
2w40_A503 Glycerol kinase, putative; closed conformation, ma 93.14
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 92.89
2hoe_A380 N-acetylglucosamine kinase; TM1224, structural gen 92.71
2ap1_A327 Putative regulator protein; zinc binding protein, 92.37
1z6r_A406 MLC protein; transcriptional repressor, ROK family 91.27
3zyy_X631 Iron-sulfur cluster binding protein; iron-sulfur-b 90.77
1u6z_A513 Exopolyphosphatase; alpha/beta protein, askha (ace 90.45
1z05_A429 Transcriptional regulator, ROK family; structural 89.02
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 88.78
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 88.64
3o8m_A485 Hexokinase; rnaseh-like fold, glycolysis, glucose 87.92
1sz2_A332 Glucokinase, glucose kinase; ATP-dependent, glucos 87.23
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 86.56
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 85.81
3bex_A249 Type III pantothenate kinase; actin-like fold, ATP 80.48
3en9_A540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 80.3
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
Probab=100.00  E-value=6.6e-104  Score=927.73  Aligned_cols=646  Identities=27%  Similarity=0.449  Sum_probs=561.1

Q ss_pred             CCcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCC
Q 003784           23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF  102 (795)
Q Consensus        23 ~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~  102 (795)
                      ||.+||||||||||+||++  .+|  +++++.|+.|+|.+||+|+|.+++++||..|..++..+|.++++++||+||+.+
T Consensus         1 Mm~~iGIDlGTtns~va~~--~~g--~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~   76 (675)
T 3d2f_A            1 MSTPFGLDLGNNNSVLAVA--RNR--GIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDY   76 (675)
T ss_dssp             -CCCEEEECCSSEEEEEEE--ETT--EEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBT
T ss_pred             CCcEEEEEcCCCcEEEEEE--ECC--eeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCC
Confidence            3569999999999999998  555  578999999999999999999999999999999999999999999999999966


Q ss_pred             hhhHhhHhhcCCCceEEECCCCcEEEEeC--C-CccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHH
Q 003784          103 KQVKHLIDSLYLPFNVVEDSRGAVSFKID--E-NNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKG  179 (795)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~a  179 (795)
                      .+........++||.++...+|.+.+.+.  + ++.++|+++++++|++|++.++.+++.++.++|||||+||++.||++
T Consensus        77 ~d~~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a  156 (675)
T 3d2f_A           77 HHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYN  156 (675)
T ss_dssp             TCTTHHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHH
T ss_pred             CcHHHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHH
Confidence            54333345668999999887888877654  3 25799999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCceeeecchhHHHHHHhhhcC-CCC---CCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEE
Q 003784          180 LMQAAELAGMNVLSLVNEHSGAALQYGIDK-DFS---NESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVK  255 (795)
Q Consensus       180 l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~-~~~---~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl  255 (795)
                      +++|+++|||+++++|+||+|||++|++.+ .++   ..+.++||||+||||||+|++++.            .+.++|+
T Consensus       157 ~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~------------~g~~~V~  224 (675)
T 3d2f_A          157 IADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK------------KGQLKVL  224 (675)
T ss_dssp             HHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE------------TTEEEEE
T ss_pred             HHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec------------CCeEEEE
Confidence            999999999999999999999999999865 222   346899999999999999999764            6789999


Q ss_pred             EeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEee
Q 003784          256 DVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSIT  335 (795)
Q Consensus       256 ~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~it  335 (795)
                      ++.|+..+||++||+.|++|+.++|.++  ++.++..+++++.+|+.+||++|+.||.+.++.+.+++++++.++.++||
T Consensus       225 a~~gd~~lGG~d~D~~l~~~l~~~f~~~--~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~it  302 (675)
T 3d2f_A          225 GTACDKHFGGRDFDLAITEHFADEFKTK--YKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLS  302 (675)
T ss_dssp             EEEEETTCSHHHHHHHHHHHHHHHHHHH--TSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEE
T ss_pred             EEcCCCCccHHHHHHHHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEe
Confidence            9999999999999999999999999998  88888889999999999999999999999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHH
Q 003784          336 RQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAA  415 (795)
Q Consensus       336 r~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa  415 (795)
                      |++|+++|+++++++..+|+++|+.+++++.+|+.|+||||+||+|+|++.|++.||. ++..+.||++|||+|||++|+
T Consensus       303 r~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~-~~~~~~nPdeaVA~GAa~~a~  381 (675)
T 3d2f_A          303 REELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK-PLSTTLNQDEAIAKGAAFICA  381 (675)
T ss_dssp             HHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTS-CEECCSCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCC-CccccCCcchHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999985 677899999999999999999


Q ss_pred             HhcCCccccCcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeecccEEEEEEeecCCCCCCCCCC
Q 003784          416 NLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATS  495 (795)
Q Consensus       416 ~ls~~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~~~i~i~y~~~~~~~~~~~~  495 (795)
                      .+++.+++ +++.+.|++|++|||++.++..   .....+|||+|+++|++++.+|++..++.+.+.|+|++.++.+ +|
T Consensus       382 ~ls~~~~v-~~~~l~Dv~p~slgi~~~~~~~---~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~-~n  456 (675)
T 3d2f_A          382 IHSPTLRV-RPFKFEDIHPYSVSYSWDKQVE---DEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPN-TP  456 (675)
T ss_dssp             HTCSSCCC-CCCEEEEEECSCEEEEECCTTC---SCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTT-CC
T ss_pred             HhCCCCcc-cceEEEeeeecceEeeecCCCC---CcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccc-cC
Confidence            99999988 8999999999999999987631   1235699999999999999999999999999989999888764 58


Q ss_pred             CceeEEEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhh
Q 003784          496 PVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETA  575 (795)
Q Consensus       496 ~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  575 (795)
                      ..||+|.+.|||+++     +|  .+.+|+|+|++|.||+|+|++++++.+..    +  +                   
T Consensus       457 ~~lg~f~l~gi~~~~-----~g--~~~~i~v~f~id~~Gil~V~a~~~~~~~~----~--~-------------------  504 (675)
T 3d2f_A          457 EQIANWEITGVQLPE-----GQ--DSVPVKLKLRCDPSGLHTIEEAYTIEDIE----A--G-------------------  504 (675)
T ss_dssp             SEEEEEEEECCCCCS-----SC--SCEEEEEEEEECTTSCEEEEEEEEECC-----------------------------
T ss_pred             ceeeEEEecCcCCCC-----CC--CcceEEEEEEEcCCCcEEEEEEEEeeccc----c--c-------------------
Confidence            999999999999875     33  33389999999999999999887653110    0  0                   


Q ss_pred             hhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHH
Q 003784          576 AQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDA  655 (795)
Q Consensus       576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~  655 (795)
                                                                      +.|.+.....|+|+..    ..+||++++++|
T Consensus       505 ------------------------------------------------~~~~t~~~~~i~i~~~----~~~ls~~ei~~~  532 (675)
T 3d2f_A          505 ------------------------------------------------SDTKTVKKDDLTIVAH----TFGLDAKKLNEL  532 (675)
T ss_dssp             --------------------------------------------------CCCCEEEECEEEEE----CSSCCHHHHHHH
T ss_pred             ------------------------------------------------ccccCcceeeEEEecC----CCCCCHHHHHHH
Confidence                                                            0000111124555532    226999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHH
Q 003784          656 EAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERL  735 (795)
Q Consensus       656 ~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~  735 (795)
                      ++++++|..+|+.++++.++||.||+|||++|+.|++.  |.++++++++++|..+|+++++|||++++++++++|++|+
T Consensus       533 ~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~  610 (675)
T 3d2f_A          533 IEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEE--YAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKY  610 (675)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--TGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHH
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence            99999999999999999999999999999999999863  8899999999999999999999999988889999999999


Q ss_pred             HHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHhcccC
Q 003784          736 DVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWET  778 (795)
Q Consensus       736 ~~L~~~~~~i~~r~~e~~~rp~a~~~~~~~~~~~~~~~~~~~~  778 (795)
                      ++|+++++||..|+.|++.||++++.|++.++.++++++.|..
T Consensus       611 ~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~~~  653 (675)
T 3d2f_A          611 EELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAA  653 (675)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred             HHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999954
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans} Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Back     alignment and structure
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 795
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 3e-49
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 4e-49
d1bupa1185 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas 3e-37
d1dkgd1183 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas 3e-36
d1ud0a_84 a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 1e-10
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 1e-10
d1jcea1137 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB 1e-08
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 1e-07
d2fsja1161 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 7e-06
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

 Score =  169 bits (430), Expect = 3e-49
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 15/207 (7%)

Query: 216 RHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEY 275
           R +  YD+G  T   +++     + +          F+V     D  LGG++ + RL+ Y
Sbjct: 3   RTIAVYDLGGGTFDISIIEIDEVDGE--------KTFEVLATNGDTHLGGEDFDSRLINY 54

Query: 276 FADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDI----DFR 331
             +EF K    G+D+R  P AM +LK+  ++ K  LS+     +++  +  D        
Sbjct: 55  LVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMN 112

Query: 332 SSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYL 391
             +TR K E L EDL  RS+  L+  L  +GL + +I  V L+GG TR+P +Q K+ E+ 
Sbjct: 113 IKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF 172

Query: 392 GRTELDRHLDADEAIVLGASLLAANLS 418
           G+ E  + ++ DEA+ +GA++    L+
Sbjct: 173 GK-EPRKDVNPDEAVAIGAAVQGGVLT 198
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 84 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query795
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1dkgd1183 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1bupa1185 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1jcea1137 Prokaryotic actin homolog MreB {Thermotoga maritim 99.83
d1yuwa1159 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.82
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.81
d1dkza2118 DnaK {Escherichia coli [TaxId: 562]} 99.55
d1ud0a_84 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.5
d1u00a2115 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.5
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 99.43
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.29
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 99.12
d1dkza197 DnaK {Escherichia coli [TaxId: 562]} 99.06
d1u00a1112 Chaperone protein hscA (Hsc66) {Escherichia coli [ 98.98
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 98.53
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 97.77
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 97.61
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 97.56
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 97.5
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 97.34
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 95.17
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 94.92
d2fxua1140 Actin {Cow (Bos taurus) [TaxId: 9913]} 94.14
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 93.33
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 93.29
d1k8ka1158 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 92.13
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 88.3
d1e4ft1193 Cell division protein FtsA {Thermotoga maritima [T 87.94
d2fsja2164 Hypothetical protein Ta0583 {Archaeon Thermoplasma 85.47
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 81.52
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.5e-38  Score=309.87  Aligned_cols=190  Identities=36%  Similarity=0.632  Sum_probs=181.3

Q ss_pred             CcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCH
Q 003784          215 SRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSP  294 (795)
Q Consensus       215 ~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~  294 (795)
                      +++||||||||||+|+|++++.            ++.+++++++|+..+||++||++|++|+.++|.++  ++.++..++
T Consensus         4 e~~VlV~D~GggT~Dvsv~~~~------------~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~--~~~~~~~~~   69 (193)
T d1bupa2           4 ERNVLIFDLGGGTFDVSILTIE------------DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRK--HKKDISENK   69 (193)
T ss_dssp             CEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHH--HSCCCTTCH
T ss_pred             CcEEEEEEeCCCeEEEEEEEEe------------CCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHH--hCCCCccCH
Confidence            5789999999999999999764            67899999999999999999999999999999988  677888999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEe
Q 003784          295 KAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELI  374 (795)
Q Consensus       295 ~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~Lv  374 (795)
                      +.+.+|+.+||++|+.||.+.++.+.++.+..+.++.++|||++|+++++|+++++..+++++|+++++.+.+|+.|+|+
T Consensus        70 ~~~~~l~~~~e~~K~~ls~~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lv  149 (193)
T d1bupa2          70 RAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLV  149 (193)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred             HHHHHHHHHHHHHhhccCCCceEEEEEecccCCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhc
Q 003784          375 GGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS  418 (795)
Q Consensus       375 GG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls  418 (795)
                      ||+||+|+|++.|+++|+..++..++||++|||+|||++||.+|
T Consensus       150 GG~sr~p~v~~~i~~~f~~~~i~~~~~p~~aVa~GaA~~aa~ls  193 (193)
T d1bupa2         150 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS  193 (193)
T ss_dssp             SGGGGCHHHHHHHHHHTTTCCCBCSSCGGGHHHHHHHHHHHHHC
T ss_pred             CCccccHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHHHHHhhC
Confidence            99999999999999999877888899999999999999999876
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure