Citrus Sinensis ID: 003790

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-----

MHSSPITVRSICNNNISDSTRHKTGSVFSTNKSNSNNSVRNMTQPQQSIRRLGLCSQLAQHSSPIVFPEKRSKKVKASSRTEQHHDGPQFDEVNKIDEHRIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDKTKTAYDKSSSDAQQQSSSAQATNQDAVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYPTDTPPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMSDLYTDIMRKSKNEGMPRASSLSSIDSIMTPSRMSGGDPDTTCSSTHASTEPSEYVRGLDPKSKRLSSGRSNVMAEPEVIHPQLPLSTTPNWPRTRSKSRTDKWTGLTVAHDPSRCSWGNTATNDKEDISSTLSDPGPIWDAEPKWDTEPNWDVENPIELPGPSDDVEAGTKKEGIPRYEENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIGRSHDHHV

ccccccEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccHccccccccccccccccccccccccEEEccccccccccccccccccccEEEccEEEEEccccccccccccccccccccccccccccccccccccccccccCECcccEEEEEcccccccEEEECccccccccccccccccCEEEEEEEEEcccHHHHHHHHHccccccCEECcccccccccccccccccccccccHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHccccccccEEEEEccccHHHHHHHHHcccccccccccccEEEEcccccccHHHHccccccHHHHHHHHHccccccccEEEEEEccccEEEEEEEEEEEcccHHHHHHHHHHHHcccHHHHHHHHHHHHHccccCEEEEEEEccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCEEEEccEEEEEEEccccccccccccccccccccccCEEEEEEccccHHHHHHHHHHcccccccccccEEEEEEEEEEEECcccccccEEEcccccccccccEEEEccccEEEEcccccccc

******T********************************************************************************************RIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDK*****************************KLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYP*****ELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSA*****************************SSIDSIMTPS*****************************K***LSSGRSNVMAEPEVIHP*********************************************************************************************IPRYEENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLI*RS*****

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Sphingoid long-chain bases kinase 1	Involved in the production of sphingolipid metabolites. Active on sphingosine, phytosphingosine (PHS, 4-hydroxysphinganine), D-erythro-dihydrosphingosine, D-erythro-sphingosine and trans-4, trans-8-sphingadienine, an LCB found exclusively in plants, but not on N-acetyl-dihydrosphingosine (C2-dihydroceramide) and D-threo-dihydrosphingosine.	confident	Q9LRB0

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QV7, chain A
Confidence level:very confident
Coverage over the Query: 278-433,446-471,528,675-789
View the alignment between query and template
View the model in PyMOL