Citrus Sinensis ID: 003790

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-----

MHSSPITVRSICNNNISDSTRHKTGSVFSTNKSNSNNSVRNMTQPQQSIRRLGLCSQLAQHSSPIVFPEKRSKKVKASSRTEQHHDGPQFDEVNKIDEHRIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDKTKTAYDKSSSDAQQQSSSAQATNQDAVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYPTDTPPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMSDLYTDIMRKSKNEGMPRASSLSSIDSIMTPSRMSGGDPDTTCSSTHASTEPSEYVRGLDPKSKRLSSGRSNVMAEPEVIHPQLPLSTTPNWPRTRSKSRTDKWTGLTVAHDPSRCSWGNTATNDKEDISSTLSDPGPIWDAEPKWDTEPNWDVENPIELPGPSDDVEAGTKKEGIPRYEENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIGRSHDHHV

ccccccEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHcccccccccccccccccccccccEEEccccccccccccccccccccEEEccEEEEEccccccccccccccccccccccccccccccccccccccccccEEEcccEEEEEcccccccEEEEEccccccccccccccccEEEEEEEEEEcccHHHHHHHHHccccccEEEEcccccccccccccccccccccccHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHccccccccccccEEEEcccccccHHHHccccccHHHHHHHHHccccccccEEEEEEccccEEEEEEEEEEEcccHHHHHHHHHHHHcccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccEEEEEEEccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHcccccccccccEEEEEEEEEEEEEcccccccEEEcccccccccccEEEEccccEEEEcccccccc

cccccEEEEEEccccccccccccccEEEEcccccccccHcccccHHHHHHHHcHHHHHHcccccccccccccccEccccccHHcccccccHHcccccccEEEEccEEEccccccccccccEEEEEccEEEEEcccccccccccccccccccccccccccEEEEEccHHEEcccccccHHHEEEEEccccccEEEEEccccccccccccccccccccEEcEEEccccHHHHHHHHHHHHHccccccccccccccccccccHHHcccHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHccccccccEEEEEccccHHHHHHHHHcccccHHHHccccEEEEEcccccHHHHHHcccccHHHHHHHHHcccccccEEEEEEccccccEEEEEEEEEHcEEccccHHHHHHHHHHccHHEHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccEEEEEEEEccccccccccEEccccccccccEEEEEEccccHHHHHHHHHHHHcccccccccEEEEEEEEEEEEccccccccEEEccEEEcccccEEHHHcHHHcEEEcccccccc

mhsspitvrsicnnnisdstrhktgsvfstnksnsnnsvrnmtqpqqsiRRLGLCsqlaqhsspivfpekrskkvkassrteqhhdgpqfdevnkidehridipggavgvgggdeksDLLGYVVYSGklvldktktaydksssdaqqqsssaqatNQDAVNAKLTSKALvwgshvlplddivsvsynnglrhftvhsyplkkgsyglscfikprrvrkDYRFLASTTEEAIQWvggfadqqcfvnclphplvsskkqasaelyptdtppelifrcksppkmlvilnprsgrgrsskvfhDIVEPIFKLAGFKLEVVKTtsaghaknlastvdisscpdgiicvggDGIINEVLNGLlsrgnqkegisipigiipagsdnsLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLClpkysyeveylpaskedlegkqsaeREVVDMSDLYTDIMRKsknegmprasslssidsimtpsrmsggdpdttcssthastepseyvrgldpkskrlssgrsnvmaepevihpqlplsttpnwprtrsksrtdkwtgltvahdpsrcswgntatndkedisstlsdpgpiwdaepkwdtepnwdvenpielpgpsddveagtkkegipryeenwivkKGQYLGIMICNHACrtvqsaqvvapraeyddntmDMLLVHGSGRLRLARFFLLLQMGrhlslpyvEYVKVKSVkikagkhthnscgidgelfplngqviSSLLPEQCRligrshdhhv

mhsspitvrsicnnnisdstrhktgsvfstnksnsnnsvrNMTQPQQSIRRLGLCSQLAQhsspivfpekrsKKVKassrteqhhdgpqfdevnkidehrIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDKTKTAYDKSSsdaqqqsssaqatNQDAVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTvhsyplkkgsyglscfikprRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYPTDTPPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSaghaknlastvdisscpDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPaskedlegkqsaerevvdmsDLYTDIMrksknegmprasslssidsimtpsrmsggdPDTTCSSthastepseyvrgldpkSKRLSSGRSNVmaepevihpqlplsttpnwprtrsksrtdkwtgltvahdpsrcswgntatndkedisstlsdpgpiWDAEPKWDTEPNWDVENPielpgpsddveagtkkegipryeenWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIGRSHDHHV

MHSSPITVRSICNNNISDSTRHKTGSVFSTNKSNSNNSVRNMTQPQQSIRRLGLCSQLAQHSSPIVFPEKRSKKVKASSRTEQHHDGPQFDEVNKIDEHRIDIPggavgvgggDEKSDLLGYVVYSGKLVLDKTKTaydksssdaqqqsssaqatnqdaVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYPTDTPPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPdgiicvggdgiiNEVLNGLLSRGNQKEgisipigiipagsDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMSDLYTDIMRKSKNEGMPRASSLSSIDSIMTPSRMSGGDPDTTCSSTHASTEPSEYVRGLDPKSKRLSSGRSNVMAEPEVIHPQLPLSTTPNWPRTRSKSRTDKWTGLTVAHDPSRCSWGNTATNDKEDISSTLSDPGPIWDAEPKWDTEPNWDVENPIELPGPSDDVEAGTKKEGIPRYEENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGrlrlarfflllQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIGRSHDHHV

***************************************************************************************************RIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDK*****************************KLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLV*****************ELIFRCKSPPKMLVILN********SKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLP*****************************************************************************************************************************LTV******************************************************************IPRYEENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLI********

******T**************************************************************************************************************DLLGYVVYSGKLVLDK*****************************************VLPLDDIVSVSYNNGLRHFTVHSYPLK*************RVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYP*************PPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSA***************************SLSSIDSIMTPSRMSGGDPDTTCSSTHASTEPSEY*RG***K***LSSGRSNVMAEPEVIHP*****************************************************************************************************IVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLI*RS*****

MHSSPITVRSICNNNISDSTRHKTGSVFSTNKSNSNNSVRNMTQPQQSIRRLGLCSQLAQHSSPIVFP******************GPQFDEVNKIDEHRIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDKTKT*********************DAVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYPTDTPPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMSDLYTDIMRKSK**********SSIDSIMTPS**************************LDPKSKRLSSGRSNVMAEPEVIHPQLPLST************TDKWTGLTVAHDPSRCSWGNTATNDKEDISSTLSDPGPIWDAEPKWDTEPNWDVENPIELPGPSDDVEAGTKKEGIPRYEENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIGRSHDHHV

***SPITVRSICNNNISDST**KTGSV**********S*RN*****QSIRRLGLCSQLAQHSSPIVF****************HHDGPQFD**NKIDEHRIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDKT**********************QDAVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYPTDTPPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPAS*****************************************************************************************************PLSTTP********************************************DPGPIWDAEPKWDTEPNWDVENPIELPGPSDDVEAGTKKEGIPRYEENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIGRS*****

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		795	2.2.26 [Sep-21-2011]
Q9LRB0		763	Sphingoid long-chain base	yes	no	0.937	0.976	0.737	0.0
Q8K4Q7		531	Ceramide kinase OS=Mus mu	yes	no	0.242	0.363	0.341	8e-28
Q8TCT0		537	Ceramide kinase OS=Homo s	yes	no	0.256	0.379	0.345	5e-27
O14159		458	Sphingoid long chain base	yes	no	0.260	0.451	0.312	2e-23
Q9JIA7		617	Sphingosine kinase 2 OS=M	no	no	0.254	0.327	0.322	2e-22
Q86KF9		624	Sphingosine kinase A OS=D	yes	no	0.232	0.296	0.370	8e-22
Q9NRA0		654	Sphingosine kinase 2 OS=H	no	no	0.237	0.288	0.328	2e-20
Q9TZI1		549	Ceramide kinase 1 OS=Caen	yes	no	0.259	0.375	0.339	5e-20
Q6B516		760	Sphingosine kinase B OS=D	no	no	0.235	0.246	0.296	1e-19
Q91V26		383	Sphingosine kinase 1 OS=R	no	no	0.261	0.543	0.282	1e-18

>sp\|Q9LRB0\|LCBK1_ARATH Sphingoid long-chain bases kinase 1 OS=Arabidopsis thaliana GN=LCBK1 PE=1 SV=1	Back alignment and function desciption

 Score = 1117 bits (2890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/772 (73%), Positives = 647/772 (83%), Gaps = 27/772 (3%)

Query: 34  NSNNSVR-NMTQPQQSIRRLGLCSQLA----QHSSPIVFPEKRSKKVKASSRTEQHHDGP 88
           N N S++  + Q QQS+RRLG CSQ+A    Q SSPIVFPEKR+KKVKASSR  +  + P
Sbjct: 7   NRNPSLKVAIPQAQQSLRRLGFCSQIATGGSQQSSPIVFPEKRNKKVKASSRRGEVTNDP 66

Query: 89  QFDEVNKIDEHRIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDKTKTAYDKSSSDAQQQ 148
           Q     K DEHRIDI       GGGDEKSDLLG +VY+GKLVLDK K+A  K +++ QQ 
Sbjct: 67  QVKP--KPDEHRIDI-------GGGDEKSDLLGSLVYAGKLVLDKRKSASGKDATEIQQP 117

Query: 149 SSSAQATNQDAVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLS 208
           +++   + + AV+AKLTS ALVWGS +L L+D+VSV+YN GLRHFTVH+YP+ KGS GLS
Sbjct: 118 AAT-DISIKKAVDAKLTSSALVWGSDMLQLNDVVSVTYNVGLRHFTVHAYPIGKGSCGLS 176

Query: 209 CFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELY--PTD 266
           CF KP+R RKD+RF+A T EEA+QWV  F DQQCF+NCLPHPLV+ KKQAS+EL+  P D
Sbjct: 177 CFTKPKRSRKDFRFVAPTVEEAVQWVASFGDQQCFINCLPHPLVA-KKQASSELFSVPID 235

Query: 267 TPPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKN 326
           TPPEL+FRCKS PKMLVILNPRSG GRS KVFH++VEPIFKLAG K+EVVKTT AGHA+ 
Sbjct: 236 TPPELVFRCKSAPKMLVILNPRSGHGRSIKVFHNVVEPIFKLAGIKMEVVKTTKAGHARE 295

Query: 327 LASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVL 386
           LASTVDI+ C DGIICVGGDGIINEVLNGLL+R N KEG+SIPIGI+PAGSDNSLVWTVL
Sbjct: 296 LASTVDINLCSDGIICVGGDGIINEVLNGLLTRSNPKEGVSIPIGIVPAGSDNSLVWTVL 355

Query: 387 GVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFG 446
           GVRDP+SAAL+IVKGGLTATDVFAVEWI TG+IHFGMTVSYYGFVSDVLELSEKYQKRFG
Sbjct: 356 GVRDPISAALSIVKGGLTATDVFAVEWIHTGIIHFGMTVSYYGFVSDVLELSEKYQKRFG 415

Query: 447 PLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMSDLYTDIMRKSKNEG 506
           PLRYFVAGFLKF+CLPKYSYEVEYLPA KED EGK   E+E VDM DLYTD+MR+S  EG
Sbjct: 416 PLRYFVAGFLKFMCLPKYSYEVEYLPAQKEDAEGKIRLEKEAVDMQDLYTDVMRRSSREG 475

Query: 507 MPRASSLSSIDSIMTPSRMSGGDPDTTCSSTHASTEPSEYVRGLDPKSKRLSSGRSNVMA 566
            PRASSLSSIDSIMTPS    G+ D TCSSTHASTEPSEYVRG+DPK KRLSSGR +V A
Sbjct: 476 FPRASSLSSIDSIMTPSV---GELD-TCSSTHASTEPSEYVRGIDPKMKRLSSGRRDVTA 531

Query: 567 EPEVIHPQLPLSTTPNWPRTRSKSRTDK-WTGLTVAHD-PSRCSWGNTATNDKEDISSTL 624
           EPEVIHPQ   STTPNWPRTRSKSR DK W GLT   D P+RCSWGNT   D+EDISST+
Sbjct: 532 EPEVIHPQAQ-STTPNWPRTRSKSRMDKGWMGLTSVQDPPTRCSWGNTGGQDREDISSTV 590

Query: 625 SDPGPIWDAEPKWDTEPN-WDVENPIELPGPSDDVEAGTKKEGI-PRYEENWIVKKGQYL 682
           SDPGPIWDA PKWDTEP+ WDVEN IELPGP +D+E G +K+ I P +E+ W+ +KG +L
Sbjct: 591 SDPGPIWDAGPKWDTEPSAWDVENSIELPGPPEDIETGLRKQSITPIFEDKWVSRKGHFL 650

Query: 683 GIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYV 742
           GIM+CNHACRTVQS+QVVAP +E+DD TMDMLLVHG GRLRL RFF+LLQ GRHLSLPYV
Sbjct: 651 GIMVCNHACRTVQSSQVVAPNSEHDDGTMDMLLVHGCGRLRLLRFFILLQTGRHLSLPYV 710

Query: 743 EYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIGRSHDHH 794
           E VKVKSVKIKAGK+TH+SCGIDGELF L+G+VIS++LPEQCRLIG +   H
Sbjct: 711 ECVKVKSVKIKAGKNTHDSCGIDGELFALHGEVISTMLPEQCRLIGNAPGRH 762

Involved in the production of sphingolipid metabolites. Active on sphingosine, phytosphingosine (PHS, 4-hydroxysphinganine), D-erythro-dihydrosphingosine, D-erythro-sphingosine and trans-4, trans-8-sphingadienine, an LCB found exclusively in plants, but not on N-acetyl-dihydrosphingosine (C2-dihydroceramide) and D-threo-dihydrosphingosine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: -EC: .EC: -

>sp\|Q8K4Q7\|CERK1_MOUSE Ceramide kinase OS=Mus musculus GN=Cerk PE=2 SV=2	Back alignment and function description

>sp\|Q8TCT0\|CERK1_HUMAN Ceramide kinase OS=Homo sapiens GN=CERK PE=1 SV=1	Back alignment and function description

>sp\|O14159\|LCB4_SCHPO Sphingoid long chain base kinase 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lcb4 PE=3 SV=1	Back alignment and function description

>sp\|Q9JIA7\|SPHK2_MOUSE Sphingosine kinase 2 OS=Mus musculus GN=Sphk2 PE=1 SV=2	Back alignment and function description

>sp\|Q86KF9\|SPHKA_DICDI Sphingosine kinase A OS=Dictyostelium discoideum GN=sgkA PE=2 SV=2	Back alignment and function description

>sp\|Q9NRA0\|SPHK2_HUMAN Sphingosine kinase 2 OS=Homo sapiens GN=SPHK2 PE=1 SV=2	Back alignment and function description

>sp\|Q9TZI1\|CERK_CAEEL Ceramide kinase 1 OS=Caenorhabditis elegans GN=T10B11.2 PE=3 SV=1	Back alignment and function description

>sp\|Q6B516\|SPHKB_DICDI Sphingosine kinase B OS=Dictyostelium discoideum GN=sgkB PE=2 SV=1	Back alignment and function description

>sp\|Q91V26\|SPHK1_RAT Sphingosine kinase 1 OS=Rattus norvegicus GN=Sphk1 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		795
356511728		768	PREDICTED: sphingoid long-chain bases ki	0.955	0.989	0.793	0.0
449458708		773	PREDICTED: sphingoid long-chain bases ki	0.945	0.972	0.775	0.0
356573377		774	PREDICTED: sphingoid long-chain bases ki	0.959	0.985	0.792	0.0
57281695		788	sphingosine kinase [Lotus japonicus]	0.925	0.934	0.788	0.0
224097386		711	predicted protein [Populus trichocarpa]	0.875	0.978	0.823	0.0
224109930		750	predicted protein [Populus trichocarpa]	0.923	0.978	0.775	0.0
297812497		763	ATLCBK1 [Arabidopsis lyrata subsp. lyrat	0.937	0.976	0.740	0.0
18420680		763	Sphingoid long-chain bases kinase 1 [Ara	0.937	0.976	0.737	0.0
222424379		763	AT5G23450 [Arabidopsis thaliana]	0.937	0.976	0.734	0.0
240256331		778	Sphingoid long-chain bases kinase 1 [Ara	0.937	0.957	0.722	0.0

>gi\|356511728\|ref\|XP_003524575.1\| PREDICTED: sphingoid long-chain bases kinase 1-like [Glycine max]	Back alignment and taxonomy information

 Score = 1195 bits (3091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/779 (79%), Positives = 677/779 (86%), Gaps = 19/779 (2%)

Query: 16  ISDSTRHKTGSVFSTNKSNSNNSVRNMTQPQQSIRRLGLCSQLA--QHSSPIVFPEKRSK 73
           + D  R+ TGS  + N +N   S   ++ PQQS+RRLGLCSQ+A  +HSSPIVFPEKR K
Sbjct: 1   MRDMHRNSTGS--TNNNTNKIPSALRLSSPQQSLRRLGLCSQIATGEHSSPIVFPEKRGK 58

Query: 74  KVKASSRTEQHHD-GPQFDEVNKIDEHRIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLD 132
            VKAS +T       P   ++ K  EHRIDI     G GGGDEKSDLLGYVV+SGKL+LD
Sbjct: 59  -VKASRKTSVPTTIRPDDQDITKNFEHRIDI----AGAGGGDEKSDLLGYVVFSGKLILD 113

Query: 133 KTKTAYDKSSSDAQQQSSSAQATNQDAVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRH 192
           K K A +  ++DAQQ S   + TNQDAV+AKLTSKA+ WGS VL LDD++SVSYN GLRH
Sbjct: 114 KRKLATN-DNADAQQTS---EITNQDAVDAKLTSKAMAWGSQVLHLDDVISVSYNAGLRH 169

Query: 193 FTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLV 252
           FTVHSYPLKK S GLSCFIK RR RKD+RF+AS+ EEA+QWVGGFADQ CFVNCLPHPL+
Sbjct: 170 FTVHSYPLKKASCGLSCFIKSRRSRKDFRFVASSIEEALQWVGGFADQHCFVNCLPHPLL 229

Query: 253 SSKKQASAELYPTDTPPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFK 312
           SSKKQAS+EL  TDTPPEL+FRCK+PPKMLVILNPRSGRGRSSKVFH IVEPIFKLAGF+
Sbjct: 230 SSKKQASSELLHTDTPPELLFRCKTPPKMLVILNPRSGRGRSSKVFHGIVEPIFKLAGFR 289

Query: 313 LEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGI 372
           LEVVKTTSAGHA+NLAS+VDISSCPDGIICVGGDGIINEVLNGLLSR NQKEGISIPIGI
Sbjct: 290 LEVVKTTSAGHARNLASSVDISSCPDGIICVGGDGIINEVLNGLLSRDNQKEGISIPIGI 349

Query: 373 IPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVS 432
           IPAGSDNSLVWTVLGVRDPVSAA+AIVKGGLTATDVFAVEWIQT  IH+G+TVSYYGFV 
Sbjct: 350 IPAGSDNSLVWTVLGVRDPVSAAMAIVKGGLTATDVFAVEWIQTNKIHYGLTVSYYGFVG 409

Query: 433 DVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMS 492
           DVLELSEKYQKRFGPLRYFVAGF KFLCLP+Y+YEVEYLPASK + EGK S E+EVVDMS
Sbjct: 410 DVLELSEKYQKRFGPLRYFVAGFFKFLCLPRYNYEVEYLPASKTEREGKLSGEKEVVDMS 469

Query: 493 DLYTDIMRKSKNEGMPRASSLSSIDSIMTPSRMSGGDPDTTCSSTHASTEPSEYVRGLDP 552
           DLYTDIM +S  +GMPRASSLSSIDSIMTPS +SG D D TCSSTHASTEPSE VRGLDP
Sbjct: 470 DLYTDIMSRSNKDGMPRASSLSSIDSIMTPSHISGVDLD-TCSSTHASTEPSELVRGLDP 528

Query: 553 KSKRLSSGRSNVMAEPEVIHPQLPLSTTPNWPRTRSKSRTDK-WTGLTVAHDPSRCSWGN 611
           KSKRLSSGR NV+AEPEVIHPQLPLSTTPNWPRTRSKSR DK WTGLT  HD SR   GN
Sbjct: 529 KSKRLSSGRGNVIAEPEVIHPQLPLSTTPNWPRTRSKSRNDKGWTGLTTTHDTSR--RGN 586

Query: 612 TATNDKEDISSTLSDPGPIWDAEPKWDTEP-NWDVENPIELPGPSDDVEAGTKKEGIPRY 670
           T TND+EDISSTLSDPGPIWDAEPKWD EP NWDVENPIELPGPSDD E G+ KE +PR+
Sbjct: 587 TVTNDREDISSTLSDPGPIWDAEPKWDAEPSNWDVENPIELPGPSDDTEIGSAKEVVPRF 646

Query: 671 EENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLL 730
            + W+  KGQ+LGI++CNHACRTVQS+QVVAP+AE+DDNT+D+LLVHGSGRLRL RFFLL
Sbjct: 647 GDKWVASKGQFLGILVCNHACRTVQSSQVVAPKAEHDDNTLDLLLVHGSGRLRLLRFFLL 706

Query: 731 LQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIGR 789
           LQMGRHLSLPYVEYVKVKSV+IK GKHTHN CGIDGELFPLNGQVISSLLPEQCRLIGR
Sbjct: 707 LQMGRHLSLPYVEYVKVKSVRIKPGKHTHNGCGIDGELFPLNGQVISSLLPEQCRLIGR 765

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449458708\|ref\|XP_004147089.1\| PREDICTED: sphingoid long-chain bases kinase 1-like [Cucumis sativus] gi\|449503315\|ref\|XP_004161941.1\| PREDICTED: sphingoid long-chain bases kinase 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356573377\|ref\|XP_003554838.1\| PREDICTED: sphingoid long-chain bases kinase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|57281695\|dbj\|BAD86587.1\| sphingosine kinase [Lotus japonicus]	Back alignment and taxonomy information

>gi\|224097386\|ref\|XP_002310911.1\| predicted protein [Populus trichocarpa] gi\|222850731\|gb\|EEE88278.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224109930\|ref\|XP_002315359.1\| predicted protein [Populus trichocarpa] gi\|222864399\|gb\|EEF01530.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297812497\|ref\|XP_002874132.1\| ATLCBK1 [Arabidopsis lyrata subsp. lyrata] gi\|297319969\|gb\|EFH50391.1\| ATLCBK1 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|18420680|ref|NP_568432.1| Sphingoid long-chain bases kinase 1 [Arabidopsis thaliana] gi|30688996|ref|NP_851065.1| Sphingoid long-chain bases kinase 1 [Arabidopsis thaliana] gi|75180325|sp|Q9LRB0.1|LCBK1_ARATH RecName: Full=Sphingoid long-chain bases kinase 1; Short=AtLCBK1; Short=LCB kinase 1; AltName: Full=Sphingosine kinase 1 gi|9695279|dbj|BAB07787.1| sphingosine kinase [Arabidopsis thaliana] gi|22654975|gb|AAM98080.1| AT5g23450/K19M13_8 [Arabidopsis thaliana] gi|28416519|gb|AAO42790.1| AT5g23450/K19M13_8 [Arabidopsis thaliana] gi|332005786|gb|AED93169.1| Sphingoid long-chain bases kinase 1 [Arabidopsis thaliana] gi|332005787|gb|AED93170.1| Sphingoid long-chain bases kinase 1 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|222424379\|dbj\|BAH20145.1\| AT5G23450 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|240256331\|ref\|NP_001031929.4\| Sphingoid long-chain bases kinase 1 [Arabidopsis thaliana] gi\|332005788\|gb\|AED93171.1\| Sphingoid long-chain bases kinase 1 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		795
TAIR\|locus:2154448		778	LCBK1 "long-chain base (LCB) k	0.938	0.958	0.666	9.7e-270
DICTYBASE\|DDB_G0284545		760	sgkB "sphingosine kinase" [Dic	0.163	0.171	0.300	6.9e-20
ZFIN\|ZDB-GENE-070112-2262		574	zgc:158263 "zgc:158263" [Danio	0.246	0.341	0.298	7.3e-20
UNIPROTKB\|F1NF59		497	CERK "Uncharacterized protein"	0.242	0.388	0.291	7.3e-17
DICTYBASE\|DDB_G0272522		624	sgkA "sphingosine kinase" [Dic	0.232	0.296	0.319	7.9e-16
UNIPROTKB\|G3MXL8		470	Bt.97968 "Uncharacterized prot	0.252	0.427	0.266	3.5e-14
UNIPROTKB\|J9NZB9		460	CERK "Uncharacterized protein"	0.255	0.441	0.276	1.1e-12
UNIPROTKB\|G3N1G9		472	Bt.97968 "Uncharacterized prot	0.254	0.427	0.264	1.3e-12
POMBASE\|SPAC4A8.07c		458	SPAC4A8.07c "sphingoid long ch	0.269	0.467	0.240	1.5e-12
UNIPROTKB\|Q8TCT0		537	CERK "Ceramide kinase" [Homo s	0.250	0.370	0.278	1.6e-12

TAIR\|locus:2154448 LCBK1 "long-chain base (LCB) kinase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2594 (918.2 bits), Expect = 9.7e-270, P = 9.7e-270
 Identities = 524/786 (66%), Positives = 591/786 (75%)

Query:    34 NSNNSVR-NMTQPQQSIRRLGLCSQLA----QHSSPIVFPEKRSKKVKASSRTEQHHDGP 88
             N N S++  + Q QQS+RRLG CSQ+A    Q SSPIVFPEKR+KKVKASSR  +  + P
Sbjct:     7 NRNPSLKVAIPQAQQSLRRLGFCSQIATGGSQQSSPIVFPEKRNKKVKASSRRGEVTNDP 66

Query:    89 QFDEVNKIDEHRIDIPXXXXXXXXXDEKSDLLGYVVYSGKLVLDKTKTXXXXXXXXXXXX 148
             Q     K DEHRIDI          DEKSDLLG +VY+GKLVLDK K+            
Sbjct:    67 QVKP--KPDEHRIDI-------GGGDEKSDLLGSLVYAGKLVLDKRKSASGKDATEIQQP 117

Query:   149 XXXXXXXXXXXVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLS 208
                        V+AKLTS ALVWGS +L L+D+VSV+YN GLRHFTVH+YP+ KGS GLS
Sbjct:   118 AATDISIKKA-VDAKLTSSALVWGSDMLQLNDVVSVTYNVGLRHFTVHAYPIGKGSCGLS 176

Query:   209 CFIKPRRVRKDYRFLASTTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAEL-YPTDT 267
             CF KP+R RKD+RF+A T EEA+QWV  F DQQCF+NCLPHPLV+ K+ +S     P DT
Sbjct:   177 CFTKPKRSRKDFRFVAPTVEEAVQWVASFGDQQCFINCLPHPLVAKKQASSELFSVPIDT 236

Query:   268 PPELIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNL 327
             PPEL+FRCKS PKMLVILNPRSG GRS KVFH++VEPIFKLAG K+EVVKTT AGHA+ L
Sbjct:   237 PPELVFRCKSAPKMLVILNPRSGHGRSIKVFHNVVEPIFKLAGIKMEVVKTTKAGHAREL 296

Query:   328 ASTVDISSCPXXXXXXXXXXXXNE---------------VLNGLLSRGNQKEXXXXXXXX 372
             ASTVDI+ C             NE               VLNGLL+R N KE        
Sbjct:   297 ASTVDINLCSDGIICVGGDGIINENSLGRLRWIQKTAFDVLNGLLTRSNPKEGVSIPIGI 356

Query:   373 XXXXXDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVS 432
                  DNSLVWTVLGVRDP+SAAL+IVKGGLTATDVFAVEWI TG+IHFGMTVSYYGFVS
Sbjct:   357 VPAGSDNSLVWTVLGVRDPISAALSIVKGGLTATDVFAVEWIHTGIIHFGMTVSYYGFVS 416

Query:   433 DVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMS 492
             DVLELSEKYQKRFGPLRYFVAGFLKF+CLPKYSYEVEYLPA KED EGK   E+E VDM 
Sbjct:   417 DVLELSEKYQKRFGPLRYFVAGFLKFMCLPKYSYEVEYLPAQKEDAEGKIRLEKEAVDMQ 476

Query:   493 DLYTDIMRKSKNEGMPRASSLSSIDSIMTPSRMSGGDPDTTCSSTHASTEPSEYVRGLDP 552
             DLYTD+MR+S  EG PRASSLSSIDSIMTPS    G+ DT CSSTHASTEPSEYVRG+DP
Sbjct:   477 DLYTDVMRRSSREGFPRASSLSSIDSIMTPSV---GELDT-CSSTHASTEPSEYVRGIDP 532

Query:   553 KSKRLSSGRSNVMAEPEVIHPQLPLSTTPNWPRTRSKSRTDK-WTGLTVAHDP-SRCSWG 610
             K KRLSSGR +V AEPEVIHPQ   STTPNWPRTRSKSR DK W GLT   DP +RCSWG
Sbjct:   533 KMKRLSSGRRDVTAEPEVIHPQAQ-STTPNWPRTRSKSRMDKGWMGLTSVQDPPTRCSWG 591

Query:   611 NTATNDKEDISSTLSDPGPIWDAEPKWDTEPN-WDVENPIELPGPSDDVEAGTKKEGI-P 668
             NT   D+EDISST+SDPGPIWDA PKWDTEP+ WDVEN IELPGP +D+E G +K+ I P
Sbjct:   592 NTGGQDREDISSTVSDPGPIWDAGPKWDTEPSAWDVENSIELPGPPEDIETGLRKQSITP 651

Query:   669 RYEENWIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGXXXXXXXX 728
              +E+ W+ +KG +LGIM+CNHACRTVQS+QVVAP +E+DD TMDMLLVHG G        
Sbjct:   652 IFEDKWVSRKGHFLGIMVCNHACRTVQSSQVVAPNSEHDDGTMDMLLVHGCGRLRLLRFF 711

Query:   729 XXXQMGRHLSLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIG 788
                Q GRHLSLPYVE VKVKSVKIKAGK+TH+SCGIDGELF L+G+VIS++LPEQCRLIG
Sbjct:   712 ILLQTGRHLSLPYVECVKVKSVKIKAGKNTHDSCGIDGELFALHGEVISTMLPEQCRLIG 771

Query:   789 RSHDHH 794
              +   H
Sbjct:   772 NAPGRH 777

GO:0004143 "diacylglycerol kinase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0007205 "protein kinase C-activating G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0017050 "D-erythro-sphingosine kinase activity" evidence=IDA

GO:0030148 "sphingolipid biosynthetic process" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0009630 "gravitropism" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

DICTYBASE\|DDB_G0284545 sgkB "sphingosine kinase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070112-2262 zgc:158263 "zgc:158263" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NF59 CERK "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0272522 sgkA "sphingosine kinase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|G3MXL8 Bt.97968 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|J9NZB9 CERK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|G3N1G9 Bt.97968 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

POMBASE\|SPAC4A8.07c SPAC4A8.07c "sphingoid long chain base kinase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8TCT0 CERK "Ceramide kinase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LRB0	LCBK1_ARATH	2, ., 7, ., -, ., -	0.7370	0.9371	0.9764	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.91	LOW CONFIDENCE prediction!
3rd Layer	2.7.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_VIII0005	hypothetical protein (711 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		795
pfam00781		127	pfam00781, DAGK_cat, Diacylglycerol kinase catalyt	4e-34
PLN02958		481	PLN02958, PLN02958, diacylglycerol kinase/D-erythr	4e-33
COG1597		301	COG1597, LCB5, Sphingosine kinase and enzymes rela	2e-27
PLN02204		601	PLN02204, PLN02204, diacylglycerol kinase	5e-13
PRK13337		304	PRK13337, PRK13337, putative lipid kinase; Reviewe	3e-11
PLN02204		601	PLN02204, PLN02204, diacylglycerol kinase	5e-11
smart00046		124	smart00046, DAGKc, Diacylglycerol kinase catalytic	5e-11
PRK11914		306	PRK11914, PRK11914, diacylglycerol kinase; Reviewe	5e-11
TIGR00147		293	TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/Bm	1e-10
PRK00861		300	PRK00861, PRK00861, putative lipid kinase; Reviewe	3e-10
PRK13057		287	PRK13057, PRK13057, putative lipid kinase; Reviewe	3e-09
PRK13059		295	PRK13059, PRK13059, putative lipid kinase; Reviewe	1e-07
PRK13055		334	PRK13055, PRK13055, putative lipid kinase; Reviewe	3e-07
COG1597		301	COG1597, LCB5, Sphingosine kinase and enzymes rela	5e-07
PRK12361		547	PRK12361, PRK12361, hypothetical protein; Provisio	2e-06
TIGR03702		293	TIGR03702, lip_kinase_YegS, lipid kinase YegS	1e-05
PRK13054		300	PRK13054, PRK13054, lipid kinase; Reviewed	2e-04
PRK13055		334	PRK13055, PRK13055, putative lipid kinase; Reviewe	4e-04

>gnl\|CDD\|216116 pfam00781, DAGK_cat, Diacylglycerol kinase catalytic domain	Back alignment and domain information

 Score =  126 bits (319), Expect = 4e-34
 Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 280 KMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDG 339
           K LVI+NP+SG GR  K     V P  + A  + +VV+T   G A  L     +    D 
Sbjct: 1   KALVIVNPKSGGGRGKKDK---VLPKLRKALNEAQVVETEEGGPAVALELARALGDFDDL 57

Query: 340 IICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIV 399
           ++  GGDG +NEVLNGL  R ++ +    P+GIIP G+ N     +    DP  AAL ++
Sbjct: 58  VVVAGGDGTVNEVLNGLAGREDRLK---PPLGIIPLGTGNDFARALGIPGDPDKAALLLI 114

Query: 400 KGGLTATDVFAVE 412
            G +   DV  ++
Sbjct: 115 LGQILRGDVVVLD 127

Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The catalytic domain is assumed from the finding of bacterial homologues. YegS is the Escherichia coli protein in this family whose crystal structure reveals an active site in the inter-domain cleft formed by four conserved sequence motifs, revealing a novel metal-binding site. The residues of this site are conserved across the family. Length = 127

>gnl\|CDD\|215517 PLN02958, PLN02958, diacylglycerol kinase/D-erythro-sphingosine kinase	Back alignment and domain information

>gnl\|CDD\|224513 COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	Back alignment and domain information

>gnl\|CDD\|215126 PLN02204, PLN02204, diacylglycerol kinase	Back alignment and domain information

>gnl\|CDD\|183982 PRK13337, PRK13337, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|215126 PLN02204, PLN02204, diacylglycerol kinase	Back alignment and domain information

>gnl\|CDD\|214487 smart00046, DAGKc, Diacylglycerol kinase catalytic domain (presumed)	Back alignment and domain information

>gnl\|CDD\|237021 PRK11914, PRK11914, diacylglycerol kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|161732 TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/BmrU family	Back alignment and domain information

>gnl\|CDD\|234850 PRK00861, PRK00861, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183857 PRK13057, PRK13057, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183858 PRK13059, PRK13059, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237282 PRK13055, PRK13055, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|224513 COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	Back alignment and domain information

>gnl\|CDD\|183473 PRK12361, PRK12361, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|163414 TIGR03702, lip_kinase_YegS, lipid kinase YegS	Back alignment and domain information

>gnl\|CDD\|237281 PRK13054, PRK13054, lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237282 PRK13055, PRK13055, putative lipid kinase; Reviewed	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		795
KOG1116		579	consensus Sphingosine kinase, involved in sphingol	100.0
PLN02958		481	diacylglycerol kinase/D-erythro-sphingosine kinase	100.0
PLN02204		601	diacylglycerol kinase	100.0
KOG1115		516	consensus Ceramide kinase [Lipid transport and met	100.0
PRK11914		306	diacylglycerol kinase; Reviewed	100.0
PRK13059		295	putative lipid kinase; Reviewed	100.0
PRK13337		304	putative lipid kinase; Reviewed	100.0
PRK13055		334	putative lipid kinase; Reviewed	100.0
PRK13057		287	putative lipid kinase; Reviewed	100.0
PRK00861		300	putative lipid kinase; Reviewed	100.0
TIGR00147		293	lipid kinase, YegS/Rv2252/BmrU family. The E. coli	100.0
PRK13054		300	lipid kinase; Reviewed	100.0
TIGR03702		293	lip_kinase_YegS lipid kinase YegS. Members of this	100.0
COG1597		301	LCB5 Sphingosine kinase and enzymes related to euk	100.0
PRK12361		547	hypothetical protein; Provisional	100.0
PF00781		130	DAGK_cat: Diacylglycerol kinase catalytic domain;	99.9
smart00046		124	DAGKc Diacylglycerol kinase catalytic domain (pres	99.76
KOG4435		535	consensus Predicted lipid kinase [Lipid transport	99.76
KOG1169		634	consensus Diacylglycerol kinase [Lipid transport a	99.75
KOG0782		1004	consensus Predicted diacylglycerol kinase [Signal	99.6
smart00045		160	DAGKa Diacylglycerol kinase accessory domain (pres	99.31
PRK03708		277	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	98.8
PRK02645		305	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	98.66
COG3199		355	Predicted inorganic polyphosphate/ATP-NAD kinase [	98.21
PRK01231		295	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	98.12
PRK03378		292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.97
PRK03372		306	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.66
KOG1170		1099	consensus Diacylglycerol kinase [Lipid transport a	97.62
PRK02155		291	ppnK NAD(+)/NADH kinase family protein; Provisiona	97.53
PF01513		285	NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me	97.49
PRK14077		287	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	97.46
PF00609		161	DAGK_acc: Diacylglycerol kinase accessory domain;	97.39
PRK02649		305	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.32
PRK04539		296	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.21
PRK01911		292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.2
PRK03501		264	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.09
PRK04885		265	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	96.89
PRK14076		569	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	96.79
PLN02935		508	Bifunctional NADH kinase/NAD(+) kinase	96.59
PRK14075		256	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	96.55
PRK01185		271	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	96.06
PRK00561		259	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	95.9
PLN02929		301	NADH kinase	95.7
PF00609		161	DAGK_acc: Diacylglycerol kinase accessory domain;	95.53
PLN02727		986	NAD kinase	95.43
PRK02231		272	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	94.91
PRK04761		246	ppnK inorganic polyphosphate/ATP-NAD kinase; Revie	91.87
COG0061		281	nadF NAD kinase [Coenzyme metabolism]	90.24
KOG4180		395	consensus Predicted kinase [General function predi	90.17
PF13685		250	Fe-ADH_2: Iron-containing alcohol dehydrogenase; P	87.6
cd08186		383	Fe-ADH8 Iron-containing alcohol dehydrogenase. Typ	87.49
PF11711		382	Tim54: Inner membrane protein import complex subun	86.36
cd08194		375	Fe-ADH6 Iron-containing alcohol dehydrogenases-lik	85.74
cd08197		355	DOIS 2-deoxy-scyllo-inosose synthase (DOIS) cataly	85.15
PRK11914		306	diacylglycerol kinase; Reviewed	84.77
TIGR03702		293	lip_kinase_YegS lipid kinase YegS. Members of this	84.27
cd08181		357	PPD-like 1,3-propanediol dehydrogenase-like (PPD).	84.23
cd08176		377	LPO Lactadehyde:propanediol oxidoreductase (LPO) c	84.14
KOG1170		1099	consensus Diacylglycerol kinase [Lipid transport a	83.75
cd08187		382	BDH Butanol dehydrogenase catalyzes the conversion	83.28
cd08185		380	Fe-ADH1 Iron-containing alcohol dehydrogenases-lik	83.16
COG1454		377	EutG Alcohol dehydrogenase, class IV [Energy produ	82.4
cd08174		331	G1PDH-like Glycerol-1-phosphate dehydrogenase-like	82.33
PRK10624		382	L-1,2-propanediol oxidoreductase; Provisional	82.33
cd08549		332	G1PDH_related Glycerol-1-phosphate_dehydrogenase a	82.24
cd08170		351	GlyDH Glycerol dehydrogenases (GlyDH) catalyzes ox	81.48
cd08171		345	GlyDH-like2 Glycerol dehydrogenase-like. Glycerol	81.13
KOG2178		409	consensus Predicted sugar kinase [Carbohydrate tra	81.12
cd08195		345	DHQS Dehydroquinate synthase (DHQS) catalyzes the	80.57
PRK13057		287	putative lipid kinase; Reviewed	80.17

>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=3.7e-72  Score=626.99  Aligned_cols=558  Identities=32%  Similarity=0.504  Sum_probs=444.0

Q ss_pred             ccccccccccccccccccCCCCCCccccccccceeeccCCCCCCCCCCCccccccccEEEeeeEeeccCCccccccCchh
Q 003790           66 VFPEKRSKKVKASSRTEQHHDGPQFDEVNKIDEHRIDIPGGAVGVGGGDEKSDLLGYVVYSGKLVLDKTKTAYDKSSSDA  145 (795)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (795)
                      ||+++ .++ ++.+...+.   ++...++|.+.||+|+++       .+++.+++|..+|.||+.++++...=..   ..
T Consensus         1 ~~~~~-~~~-~~~~~~~~~---~~~~~~p~s~~~~~~~~~-------~~~~~~~~~~~~~ag~~~~~~~~~~~~~---~s   65 (579)
T KOG1116|consen    1 VLGDG-TKK-SSTSTRDEE---DSLQVKPKSTIHPVDISA-------PAEKVDVLGKLLYAGKYVLEPRESEDGS---SS   65 (579)
T ss_pred             CCccc-ccc-CCCCCcccc---ccCccCCccceeeecccC-------CCCccchhheeeccceEecccccccccc---cc
Confidence            57777 444 434444442   678889999999999963       4899999999999999999998766221   22


Q ss_pred             hccchhhhhccccceeeeeecceeeecccccCCcceEEEEecCCcceEEEEEeecCCCCCccccccCCeeeEeEEEEecC
Q 003790          146 QQQSSSAQATNQDAVNAKLTSKALVWGSHVLPLDDIVSVSYNNGLRHFTVHSYPLKKGSYGLSCFIKPRRVRKDYRFLAS  225 (795)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~d~~~~~~~~~~~~~~i~~y~~~k~~~g~~~~~~~~r~~~~~~f~~~  225 (795)
                      ++++...-.+...+++++++...+.|....++.-+.++++-+..+.+++||.|+.++.       .+++|.++++++.+.
T Consensus        66 ~~~~~~~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~~  138 (579)
T KOG1116|consen   66 IQSDAATSISLSKAKEARLESGLFPLKEVMLFKNNTVSVSVSDSVSLLPIYKLGPKRK-------LLRVRSTRPFRVDCT  138 (579)
T ss_pred             cccchhhhcccccchhhhhccceeeeeecccccCceeEecCccchhheehhhcccccc-------ceeeeecccccceee
Confidence            3344444458889999999999999999999999999988666789999999887654       358888889988887


Q ss_pred             CHHHHHHHHHhhhcccccccccCCCcccccccccccCCCCCCCcc-ccccCCCCCeEEEEEcCCCCCCCchhhHHHhHHH
Q 003790          226 TTEEAIQWVGGFADQQCFVNCLPHPLVSSKKQASAELYPTDTPPE-LIFRCKSPPKMLVILNPRSGRGRSSKVFHDIVEP  304 (795)
Q Consensus       226 ~~~~a~~W~~~~~~~~~~i~~l~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~r~krllVIvNP~SG~Gka~ki~~~~I~p  304 (795)
                      -.+..+.|+.++..+++......            +.. ...+.+ .+..++++++++||+||++|+|++.++|+.+++|
T Consensus       139 ~~~~~~~~v~~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~~r~~~lLV~iNP~gGkGka~~~F~~~v~P  205 (579)
T KOG1116|consen  139 PVEPFTLKVASFCRKQAAETSDR------------SFT-FEGLGDKSVDSLKRPRRLLVFINPFGGKGKAKKLFKNHVEP  205 (579)
T ss_pred             eeehhhcccceeehhhhhccccc------------cce-ecccccccccccCCCccEEEEECCCCCCccHHHHHHhhhhh
Confidence            77777888777654443322211            000 011222 3567889999999999999999999999999999


Q ss_pred             HHHHcCCeEEEEEeCCcchHHHHHHHhhhcCCCCCeEEEcCchHHHHHHHHHHcCCCcccCCCccEEEeecCCcchhhhh
Q 003790          305 IFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWT  384 (795)
Q Consensus       305 lL~~aGi~~~v~~T~~~ghA~ela~~l~~~~~~D~IVvvGGDGTlnEVvNGL~~r~d~~~a~~iPLGIIP~GTGNdfArs  384 (795)
                      +|.++++.++++.|++++||+|+++++++. .||+|||+||||++|||+|||+.|+||+.+.++|||||||||||+||++
T Consensus       206 ll~~A~i~~evv~T~~~~HArei~rt~dl~-kyDgIv~vsGDGl~hEVlNGLl~R~D~~~~~klPigiiP~GSGNala~S  284 (579)
T KOG1116|consen  206 LLSEAGISFEVVLTTRPNHAREIVRTLDLG-KYDGIVCVSGDGLLHEVLNGLLERPDWEAAVKLPIGIIPCGSGNALAKS  284 (579)
T ss_pred             hhhhcCceEEEEEecCccHHHHHHHhhhcc-ccceEEEecCCcCHHHhhhccccccchhhHhcCceeEeecCCccHHHHH
Confidence            999999999999999999999999999876 4899999999999999999999999999999999999999999999999


Q ss_pred             hcCCC--C-HHHHHHHHHhCceeEEeEEEEEEeecceeEEEEEEEEEeeeccchhhhHHHHhhcCcHHHHHHHHHHHhcC
Q 003790          385 VLGVR--D-PVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCL  461 (795)
Q Consensus       385 llGi~--d-p~~Aa~~IlkG~~~~IDlg~V~~~~~g~~~ffln~~g~GfdAdV~~~sek~Rr~lG~lrY~laal~~L~~~  461 (795)
                      +++..  + +..|+..|++|..+++|+..+++. .+.++|++++++|||.|||++.+|+|| |||++||++++|.+|+.+
T Consensus       285 v~~~~~~~~~~~a~l~iirg~~t~~dv~~v~~~-~~~~~fSfLs~~wGlIADiDI~SEk~R-~mG~~Rf~lg~~~rl~~l  362 (579)
T KOG1116|consen  285 VLWTNGPDLPLLATLLIIRGRLTPMDVSVVEYA-GKDRHFSFLSAAWGLIADVDIESEKYR-WMGPARFTLGAFLRLIQL  362 (579)
T ss_pred             hhcccCcccchHHHHHHHccCCCchheeehhhc-cCcceEEEEeeeeeeEEecccchHHHH-hhcchhhhHHHHHHHHhc
Confidence            88776  4 888999999999999999999873 344589999999999999999999999 999999999999999999


Q ss_pred             CceEEEEEEecCCccccccccccccceeecCceeeeeeccCCCCCCcccCCCCCcCCCCCCCCCCCCCCCcccCCCCCCC
Q 003790          462 PKYSYEVEYLPASKEDLEGKQSAEREVVDMSDLYTDIMRKSKNEGMPRASSLSSIDSIMTPSRMSGGDPDTTCSSTHAST  541 (795)
Q Consensus       462 r~y~~~I~~~p~~~~~~~g~~~~~~ek~e~~~~~v~V~Nr~~GgG~~iaP~A~~~d~~~t~~~~~DG~Ldvv~~~~~~~~  541 (795)
                      +.|+++|+|+|+......+.+          .++              .+.+++                ..|.+.++.+
T Consensus       363 r~Y~gri~ylp~~~k~~~~~~----------~~~--------------~~~~~~----------------~~~~~~~a~~  402 (579)
T KOG1116|consen  363 RKYKGRIEYLPAKGKSAEPLP----------AHE--------------LEAADS----------------EGCLSTHADT  402 (579)
T ss_pred             cCCCceEEEecccccccCccc----------chh--------------hccccc----------------cccccccccc
Confidence            999999999987654322210          000              011110                2467788888


Q ss_pred             CCcccccCCCcccccccCCCCCCCCCCcccCCCCCCCCCCCCCCCcccccccccccccccCCCCCcCCCCCcCCCccccc
Q 003790          542 EPSEYVRGLDPKSKRLSSGRSNVMAEPEVIHPQLPLSTTPNWPRTRSKSRTDKWTGLTVAHDPSRCSWGNTATNDKEDIS  621 (795)
Q Consensus       542 ~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~s~~r~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  621 (795)
                      +++.|.|.-.+++.+.+..+++...++.++ +                                                
T Consensus       403 ~~s~~~~~~~~~~~~~~~~~s~~~e~s~~~-~------------------------------------------------  433 (579)
T KOG1116|consen  403 EPSEYPRLSVPKMSPKSVLRSPVSETSPVI-P------------------------------------------------  433 (579)
T ss_pred             cccccccccccccCccccccCcccccCccc-C------------------------------------------------
Confidence            999888876655444443333222221100 0                                                


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCcccCCCCCCCCCcEEEec-cEEEEEEecccccccCCCCcc
Q 003790          622 STLSDPGPIWDAEPKWDTEPNWDVENPIELPGPSDDVEAGTKKEGIPRYEENWIVKKG-QYLGIMICNHACRTVQSAQVV  700 (795)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~l~~~~~~~~lp~~~~~W~~ieG-~Fv~v~v~N~~~~~~~~d~~l  700 (795)
                                          .           ++..+ ++..++++|   .+|++++| +|+++.+.-+++  +++|..+
T Consensus       434 --------------------~-----------~~~~~-~p~~~~p~p---sdw~~~~~~d~~~~~a~~~sy--~~~d~~~  476 (579)
T KOG1116|consen  434 --------------------E-----------DPLHL-SPPLEEPLP---SDWEVVPGVDFVCILAILLSY--LGADMKF  476 (579)
T ss_pred             --------------------C-----------ccccC-CCcccCCCC---cceeeecCcceeeeehhhhhh--ccCCccc
Confidence                                0           00000 011112444   56999999 999998886664  7999999


Q ss_pred             CcCCCCCCCeEEEEEEc-CcChHHHHHHHHHhccCCCC--CCCceEEEEEEEEEEEecCCCCCceeecCceeecCeeEEE
Q 003790          701 APRAEYDDNTMDMLLVH-GSGRLRLARFFLLLQMGRHL--SLPYVEYVKVKSVKIKAGKHTHNSCGIDGELFPLNGQVIS  777 (795)
Q Consensus       701 AP~A~l~DG~LDLvlV~-~~sR~~Ll~~l~~~~~G~hl--~~P~V~~ikvka~rIep~~~~~~~i~VDGE~ip~~~~V~~  777 (795)
                      ||.|.++||+|||++++ +.+|.+|+++|++|..|+|+  ..|+|.|++|++|+|+|.. ..+++.+|||.+++.. +.+
T Consensus       477 ~P~A~~~dg~I~lv~~~~~~~r~~ll~~llald~gsh~~~~~p~v~~~~vra~r~epv~-~~~~~~vDGE~~~~ep-~q~  554 (579)
T KOG1116|consen  477 APAARPDDGLIHLVIVRAGGSRTQLLRLLLALDKGSHLHVECPFVKYVKVRAFRLEPVT-PSGYFAVDGELVPLEP-LQV  554 (579)
T ss_pred             ccccccCCCeEEEEEEccCCcHHHHHHHHHhhcccccccccCCceeEEEeEEEEEEEec-CCceEEecccEeeccc-eeE
Confidence            99999999999999995 66999999999999999997  7899999999999999984 4488999999999775 889


Q ss_pred             eeeccccccccc
Q 003790          778 SLLPEQCRLIGR  789 (795)
Q Consensus       778 ~vlP~~~rlig~  789 (795)
                      +++|++|.++-+
T Consensus       555 ~v~p~~i~~~s~  566 (579)
T KOG1116|consen  555 QVLPGLILTLSG  566 (579)
T ss_pred             EecccceeEEec
Confidence            999999999876

>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase	Back alignment and domain information

>PLN02204 diacylglycerol kinase	Back alignment and domain information

>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PRK11914 diacylglycerol kinase; Reviewed	Back alignment and domain information

>PRK13059 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK13337 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK13055 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK13057 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK00861 putative lipid kinase; Reviewed	Back alignment and domain information

>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family	Back alignment and domain information

>PRK13054 lipid kinase; Reviewed	Back alignment and domain information

>TIGR03702 lip_kinase_YegS lipid kinase YegS	Back alignment and domain information

>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	Back alignment and domain information

>PRK12361 hypothetical protein; Provisional	Back alignment and domain information

>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]	Back alignment and domain information

>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed)	Back alignment and domain information

>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]	Back alignment and domain information

>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed)	Back alignment and domain information

>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]	Back alignment and domain information

>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]	Back alignment and domain information

>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional	Back alignment and domain information

>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2	Back alignment and domain information

>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases	Back alignment and domain information

>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PLN02935 Bifunctional NADH kinase/NAD(+) kinase	Back alignment and domain information

>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PLN02929 NADH kinase	Back alignment and domain information

>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases	Back alignment and domain information

>PLN02727 NAD kinase	Back alignment and domain information

>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed	Back alignment and domain information

>COG0061 nadF NAD kinase [Coenzyme metabolism]	Back alignment and domain information

>KOG4180 consensus Predicted kinase [General function prediction only]	Back alignment and domain information

>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C	Back alignment and domain information

>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase	Back alignment and domain information

>PF11711 Tim54: Inner membrane protein import complex subunit Tim54; InterPro: IPR021056 Mitochondrial function depends on the import of hundreds of different proteins synthesised in the cytosol	Back alignment and domain information

>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like	Back alignment and domain information

>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics	Back alignment and domain information

>PRK11914 diacylglycerol kinase; Reviewed	Back alignment and domain information

>TIGR03702 lip_kinase_YegS lipid kinase YegS	Back alignment and domain information

>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD)	Back alignment and domain information

>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria	Back alignment and domain information

>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]	Back alignment and domain information

>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process	Back alignment and domain information

>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like	Back alignment and domain information

>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion]	Back alignment and domain information

>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like	Back alignment and domain information

>PRK10624 L-1,2-propanediol oxidoreductase; Provisional	Back alignment and domain information

>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins	Back alignment and domain information

>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation	Back alignment and domain information

>cd08171 GlyDH-like2 Glycerol dehydrogenase-like	Back alignment and domain information

>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis	Back alignment and domain information

>PRK13057 putative lipid kinase; Reviewed	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		795
2qv7_A		337	Diacylglycerol kinase DGKB; alpha-beta domain 1, b	4e-35
2qv7_A		337	Diacylglycerol kinase DGKB; alpha-beta domain 1, b	1e-11
3s40_A		304	Diacylglycerol kinase; structural genomics, the ce	2e-34
3s40_A		304	Diacylglycerol kinase; structural genomics, the ce	4e-10
2bon_A		332	Lipid kinase; DAG kinase, transferase; 1.90A {Esch	3e-31
2bon_A		332	Lipid kinase; DAG kinase, transferase; 1.90A {Esch	3e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Length = 337	Back alignment and structure

 Score =  135 bits (343), Expect = 4e-35
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 20/195 (10%)

Query: 280 KMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDG 339
           +  +I NP SG+ +  +   D +    + AG++     T   G A   A    +    D 
Sbjct: 26  RARIIYNPTSGKEQFKRELPDALI-KLEKAGYETSAYATEKIGDATLEAERA-MHENYDV 83

Query: 340 IICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGV-RDPVSAALAI 398
           +I  GGDG +NEV+NG+  + N+       +G+IP G+ N      L +  D + A   I
Sbjct: 84  LIAAGGDGTLNEVVNGIAEKPNR-----PKLGVIPMGTVNDFGRA-LHIPNDIMGALDVI 137

Query: 399 VKGGLTATDVFAVEWIQTGVI--HFGMTVSYYGFVSDV-LELSEKYQKRFGPLRYFVAGF 455
           ++G  T  D+        G +   + + ++  G ++ V  E   K +   GP  Y++ GF
Sbjct: 138 IEGHSTKVDI--------GKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPFAYYIKGF 189

Query: 456 LKFLCLPKYSYEVEY 470
                +      +EY
Sbjct: 190 EMLPQMKAVDLRIEY 204

PyMOL of 2qv7

>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Length = 337	Back alignment and structure

>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Length = 304	Back alignment and structure

>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Length = 304	Back alignment and structure

>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Length = 332	Back alignment and structure

>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Length = 332	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		795
3s40_A		304	Diacylglycerol kinase; structural genomics, the ce	100.0
2qv7_A		337	Diacylglycerol kinase DGKB; alpha-beta domain 1, b	100.0
2bon_A		332	Lipid kinase; DAG kinase, transferase; 1.90A {Esch	100.0
2an1_A		292	Putative kinase; structural genomics, PSI, protein	99.05
1u0t_A		307	Inorganic polyphosphate/ATP-NAD kinase; alpha-beta	98.95
1yt5_A		258	Inorganic polyphosphate/ATP-NAD kinase; domain 1:	98.84
2i2c_A		272	Probable inorganic polyphosphate/ATP-NAD kinase 1;	98.78
3afo_A		388	NADH kinase POS5; alpha/beta+BETA sandwich, ATP-bi	97.9
1z0s_A		278	Probable inorganic polyphosphate/ATP-NAD kinase; A	96.41
3pfn_A		365	NAD kinase; structural genomics consortium, SNP, S	95.2
1o2d_A		371	Alcohol dehydrogenase, iron-containing; TM0920, st	86.24
1vlj_A		407	NADH-dependent butanol dehydrogenase; TM0820, stru	81.0
3okf_A		390	3-dehydroquinate synthase; structural genomics, ce	81.0
3ce9_A		354	Glycerol dehydrogenase; NP_348253.1, 3-dehydroquin	80.57

>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A	Back alignment and structure

Probab=100.00  E-value=1.9e-46  Score=401.42  Aligned_cols=290  Identities=24%  Similarity=0.330  Sum_probs=231.3

Q ss_pred             CCCCeEEEEEcCCCCCCCchhhHHHhHHHHHHHcCCeEEEEEeCCcchHHHHHHHhhhcCCCCCeEEEcCchHHHHHHHH
Q 003790          276 KSPPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNG  355 (795)
Q Consensus       276 ~r~krllVIvNP~SG~Gka~ki~~~~I~plL~~aGi~~~v~~T~~~ghA~ela~~l~~~~~~D~IVvvGGDGTlnEVvNG  355 (795)
                      ..++|++||+||.||++++.+.+ +.+++.|++++++++++.|++++|+.++++++..  .+|.||++|||||||||+|+
T Consensus         6 ~~m~~~~vi~Np~sG~~~~~~~~-~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~--~~d~vv~~GGDGTl~~v~~~   82 (304)
T 3s40_A            6 TKFEKVLLIVNPKAGQGDLHTNL-TKIVPPLAAAFPDLHILHTKEQGDATKYCQEFAS--KVDLIIVFGGDGTVFECTNG   82 (304)
T ss_dssp             CSCSSEEEEECTTCSSSCHHHHH-HHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHTT--TCSEEEEEECHHHHHHHHHH
T ss_pred             CCCCEEEEEECcccCCCchHHHH-HHHHHHHHHcCCeEEEEEccCcchHHHHHHHhhc--CCCEEEEEccchHHHHHHHH
Confidence            35789999999999999988888 5789999999999999999999999999999853  57999999999999999999


Q ss_pred             HHcCCCcccCCCccEEEeecCCcchhhhhhcCC-CCHHHHHHHHHhCceeEEeEEEEEEeecceeEEEEEEEEEeeeccc
Q 003790          356 LLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGV-RDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDV  434 (795)
Q Consensus       356 L~~r~d~~~a~~iPLGIIP~GTGNdfArsllGi-~dp~~Aa~~IlkG~~~~IDlg~V~~~~~g~~~ffln~~g~GfdAdV  434 (795)
                      |+.++     .++|||+||+||+|+||++ +|+ .++.+|+..|++|..+++|+++++    +  +||++++++||+|+|
T Consensus        83 l~~~~-----~~~~l~iiP~Gt~N~~ar~-lg~~~~~~~a~~~i~~g~~~~iDlg~v~----~--~~F~~~~~~G~da~v  150 (304)
T 3s40_A           83 LAPLE-----IRPTLAIIPGGTCNDFSRT-LGVPQNIAEAAKLITKEHVKPVDVAKAN----G--QHFLNFWGIGLVSEV  150 (304)
T ss_dssp             HTTCS-----SCCEEEEEECSSCCHHHHH-TTCCSSHHHHHHHHTTCCEEEEEEEEET----T--EEESSEEEEC-----
T ss_pred             HhhCC-----CCCcEEEecCCcHHHHHHH-cCCCccHHHHHHHHHhCCeEEEEEEEEC----C--EEEEEEEeehHHHHH
Confidence            98752     2689999999999999998 554 699999999999999999999995    2  477899999999999


Q ss_pred             hhhh-HHHHhhcCcHHHHHHHHHHHhcCCceEEEEEEecCCccccccccccccceeecCceeeeeeccCCCCCCcccCCC
Q 003790          435 LELS-EKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMSDLYTDIMRKSKNEGMPRASSL  513 (795)
Q Consensus       435 ~~~s-ek~Rr~lG~lrY~laal~~L~~~r~y~~~I~~~p~~~~~~~g~~~~~~ek~e~~~~~v~V~Nr~~GgG~~iaP~A  513 (795)
                      +... ++.|+++|+++|++++++.|+++++++++|+++                                          
T Consensus       151 ~~~~~~~~k~~~G~~~Y~~~~l~~l~~~~~~~~~i~~d------------------------------------------  188 (304)
T 3s40_A          151 SNNIDAEEKAKLGKIGYYLSTIRTVKNAETFPVKITYD------------------------------------------  188 (304)
T ss_dssp             -------------CHHHHTTTC------CCEEEEEEET------------------------------------------
T ss_pred             HHhcCHHHhhcCCchHHHHHHHHHHhhcCCceEEEEEC------------------------------------------
Confidence            8754 455668999999999999999888888877651                                          


Q ss_pred             CCcCCCCCCCCCCCCCCCcccCCCCCCCCCcccccCCCcccccccCCCCCCCCCCcccCCCCCCCCCCCCCCCccccccc
Q 003790          514 SSIDSIMTPSRMSGGDPDTTCSSTHASTEPSEYVRGLDPKSKRLSSGRSNVMAEPEVIHPQLPLSTTPNWPRTRSKSRTD  593 (795)
Q Consensus       514 ~~~d~~~t~~~~~DG~Ldvv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~s~~r~~  593 (795)
                                    |                                                                 
T Consensus       189 --------------g-----------------------------------------------------------------  189 (304)
T 3s40_A          189 --------------G-----------------------------------------------------------------  189 (304)
T ss_dssp             --------------T-----------------------------------------------------------------
T ss_pred             --------------C-----------------------------------------------------------------
Confidence                          0                                                                 


Q ss_pred             ccccccccCCCCCcCCCCCcCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCcccCCCCCCCCC
Q 003790          594 KWTGLTVAHDPSRCSWGNTATNDKEDISSTLSDPGPIWDAEPKWDTEPNWDVENPIELPGPSDDVEAGTKKEGIPRYEEN  673 (795)
Q Consensus       594 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~l~~~~~~~~lp~~~~~  673 (795)
                                                                                                      
T Consensus       190 --------------------------------------------------------------------------------  189 (304)
T 3s40_A          190 --------------------------------------------------------------------------------  189 (304)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cEEEeccEEEEEEecccccccCCCCccCcCCCCCCCeEEEEEEcCcChHHHHHHHHHhccCCCCCCCceEEEEEEEEEEE
Q 003790          674 WIVKKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIK  753 (795)
Q Consensus       674 W~~ieG~Fv~v~v~N~~~~~~~~d~~lAP~A~l~DG~LDLvlV~~~sR~~Ll~~l~~~~~G~hl~~P~V~~ikvka~rIe  753 (795)
                       +.++++++++.++|+++  .|..+.++|.|.++||.|||++++..+++.+..+|..+..|. ...|+|+++++++++|+
T Consensus       190 -~~~~~~~~~v~v~N~~~--~Ggg~~~~p~a~~~DG~Ldv~~v~~~~~~~l~~l~~~~~~g~-~~~~~v~~~~~~~v~i~  265 (304)
T 3s40_A          190 -QVYEDEAVLVMVGNGEY--LGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIGKKLFED-SNENDIFHVKAKSIHIE  265 (304)
T ss_dssp             -EEEEEEEEEEEEECSSE--ETTEECSSTTCCTTSSCEEEEEEETTCHHHHHHHTTCCCSSC-CCTTTEEEEEESEEEEE
T ss_pred             -EEEEeEEEEEEEECCCc--CCCCcccCCCCcCCCCEEEEEEEccCCHHHHHHHHHHHhcCC-CCCCcEEEEEccEEEEE
Confidence             11355788999999997  488899999999999999999999999887777666555665 78899999999999999


Q ss_pred             ecCCCCCceeecCceeecCeeEEEeeecccccccc
Q 003790          754 AGKHTHNSCGIDGELFPLNGQVISSLLPEQCRLIG  788 (795)
Q Consensus       754 p~~~~~~~i~VDGE~ip~~~~V~~~vlP~~~rlig  788 (795)
                      +.  .+..+++|||.+. ..+++++++|++++|+-
T Consensus       266 ~~--~~~~~~~DGE~~~-~~p~~i~v~p~al~v~~  297 (304)
T 3s40_A          266 TE--EEKEVDTDGESSL-HTPCQIELLQGHFTMIY  297 (304)
T ss_dssp             ES--SCCEEEEC--CCE-ESSEEEEEEEEEEEEEC
T ss_pred             eC--CCcEEEeCCCCCC-CceEEEEEECCeEEEEe
Confidence            96  4678999999986 46899999999999984

PyMOL of 3s40

>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A	Back alignment and structure

>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A	Back alignment and structure

>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}	Back alignment and structure

>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A	Back alignment and structure

>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}	Back alignment and structure

>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*	Back alignment and structure

>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}	Back alignment and structure

>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*	Back alignment and structure

>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}	Back alignment and structure

>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*	Back alignment and structure

>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2	Back alignment and structure

>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}	Back alignment and structure

>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		795
d2qv7a1		312	e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Sta	4e-22
d2qv7a1		312	e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Sta	5e-11
d2bona1		295	e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia	5e-19

>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Length = 312	Back information, alignment and structure


class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

 Score = 95.8 bits (237), Expect = 4e-22
 Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 14/188 (7%)

Query: 280 KMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDG 339
           +  +I NP SG+ +  +   D +    + AG++     T   G A   A      +  D 
Sbjct: 4   RARIIYNPTSGKEQFKRELPDAL-IKLEKAGYETSAYATEKIGDATLEAERAMHENY-DV 61

Query: 340 IICVGGDGIINEVLNGLLSRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIV 399
           +I  GGDG +NEV+NG+  + N+       +G+IP G+ N     +    D + A   I+
Sbjct: 62  LIAAGGDGTLNEVVNGIAEKPNR-----PKLGVIPMGTVNDFGRALHIPNDIMGALDVII 116

Query: 400 KGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVS-DVLELSEKYQKRFGPLRYFVAGFLKF 458
           +G  T  D+  +         + + ++  G ++    E   K +   GP  Y++ GF   
Sbjct: 117 EGHSTKVDIGKMNN------RYFINLAAGGQLTQVSYETPSKLKSIVGPFAYYIKGFEML 170

Query: 459 LCLPKYSY 466
             +     
Sbjct: 171 PQMKAVDL 178

PyMOL of d2qv7a1

>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Length = 312	Back information, alignment and structure

>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Length = 295	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		795
d2qv7a1		312	Diacylglycerol kinase DgkB {Staphylococcus aureus	100.0
d2bona1		295	Lipid kinase YegS {Escherichia coli [TaxId: 562]}	100.0
d1u0ta_		302	Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob	97.33
d1z0sa1		249	Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa	94.97
d1vlja_		398	NADH-dependent butanol dehydrogenase A (TM0820) {T	87.64
d1o2da_		359	Alcohol dehydrogenase TM0920 {Thermotoga maritima	86.34

>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}	Back information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=4.5e-46  Score=394.73  Aligned_cols=291  Identities=23%  Similarity=0.306  Sum_probs=246.9

Q ss_pred             CCeEEEEEcCCCCCCCchhhHHHhHHHHHHHcCCeEEEEEeCCcchHHHHHHHhhhcCCCCCeEEEcCchHHHHHHHHHH
Q 003790          278 PPKMLVILNPRSGRGRSSKVFHDIVEPIFKLAGFKLEVVKTTSAGHAKNLASTVDISSCPDGIICVGGDGIINEVLNGLL  357 (795)
Q Consensus       278 ~krllVIvNP~SG~Gka~ki~~~~I~plL~~aGi~~~v~~T~~~ghA~ela~~l~~~~~~D~IVvvGGDGTlnEVvNGL~  357 (795)
                      .||++||+||+||++++.+.+. .+.+.|+.++++++++.|++.+|+.++++++... .+|.||++|||||||||+|+|+
T Consensus         2 ~kr~~vi~NP~SG~~~~~~~~~-~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~-~~d~ivv~GGDGTv~~v~~~l~   79 (312)
T d2qv7a1           2 RKRARIIYNPTSGKEQFKRELP-DALIKLEKAGYETSAYATEKIGDATLEAERAMHE-NYDVLIAAGGDGTLNEVVNGIA   79 (312)
T ss_dssp             CEEEEEEECTTSTTSCHHHHHH-HHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTT-TCSEEEEEECHHHHHHHHHHHT
T ss_pred             CceEEEEECcCCCCCcHHHHHH-HHHHHHHHCCCeEEEEEcCCccHHHHHHHHHHHc-CCCEEEEEcCCcHHHHHHHHHH
Confidence            4899999999999999988885 6777999999999999999999999999987654 4799999999999999999998


Q ss_pred             cCCCcccCCCccEEEeecCCcchhhhhhcCCCCHHHHHHHHHhCceeEEeEEEEEEeecceeEEEEEEEEEeeeccchhh
Q 003790          358 SRGNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAALAIVKGGLTATDVFAVEWIQTGVIHFGMTVSYYGFVSDVLEL  437 (795)
Q Consensus       358 ~r~d~~~a~~iPLGIIP~GTGNdfArsllGi~dp~~Aa~~IlkG~~~~IDlg~V~~~~~g~~~ffln~~g~GfdAdV~~~  437 (795)
                      +++.     ++||||||+||||+|||++....++..++..+.+|..+++|++.++.      ++|++++++||+|+++..
T Consensus        80 ~~~~-----~~~l~iiP~GTgN~~ar~l~~~~~~~~al~~~~~~~~~~id~~~v~~------~~f~~~~~~G~~a~~~~~  148 (312)
T d2qv7a1          80 EKPN-----RPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNN------RYFINLAAGGQLTQVSYE  148 (312)
T ss_dssp             TCSS-----CCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEEEEEEEEETT------EEESSEEEEECBCC----
T ss_pred             hhcc-----ccceEEeecCCCCcchhhccccchHHHHHHhhhcCCcEEecccccCc------cceeeeeeeehhhHHHHH
Confidence            7642     58999999999999999844458999999999999999999999952      477899999999999865


Q ss_pred             hH-HHHhhcCcHHHHHHHHHHHhcCCceEEEEEEecCCccccccccccccceeecCceeeeeeccCCCCCCcccCCCCCc
Q 003790          438 SE-KYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDLEGKQSAEREVVDMSDLYTDIMRKSKNEGMPRASSLSSI  516 (795)
Q Consensus       438 se-k~Rr~lG~lrY~laal~~L~~~r~y~~~I~~~p~~~~~~~g~~~~~~ek~e~~~~~v~V~Nr~~GgG~~iaP~A~~~  516 (795)
                      .+ +.++.+|.++|++++++.++.+++++++|+++                                             
T Consensus       149 ~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~i~~d---------------------------------------------  183 (312)
T d2qv7a1         149 TPSKLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYD---------------------------------------------  183 (312)
T ss_dssp             ---------CGGGSCCCTTTTGGGBCCEEEEEEET---------------------------------------------
T ss_pred             HHHhhhccccchHHHHHHHHHhhccCceEEEeecC---------------------------------------------
Confidence            43 44557899999999999888887777776541                                             


Q ss_pred             CCCCCCCCCCCCCCCcccCCCCCCCCCcccccCCCcccccccCCCCCCCCCCcccCCCCCCCCCCCCCCCcccccccccc
Q 003790          517 DSIMTPSRMSGGDPDTTCSSTHASTEPSEYVRGLDPKSKRLSSGRSNVMAEPEVIHPQLPLSTTPNWPRTRSKSRTDKWT  596 (795)
Q Consensus       517 d~~~t~~~~~DG~Ldvv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~s~~r~~~~~  596 (795)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (312)
T d2qv7a1         184 --------------------------------------------------------------------------------  183 (312)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCcCCCCCcCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCcccCCCCCCCCCcEE
Q 003790          597 GLTVAHDPSRCSWGNTATNDKEDISSTLSDPGPIWDAEPKWDTEPNWDVENPIELPGPSDDVEAGTKKEGIPRYEENWIV  676 (795)
Q Consensus       597 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~l~~~~~~~~lp~~~~~W~~  676 (795)
                                                                                                   +++
T Consensus       184 -----------------------------------------------------------------------------g~~  186 (312)
T d2qv7a1         184 -----------------------------------------------------------------------------GNV  186 (312)
T ss_dssp             -----------------------------------------------------------------------------TEE
T ss_pred             -----------------------------------------------------------------------------Ccc
Confidence                                                                                         123


Q ss_pred             EeccEEEEEEecccccccCCCCccCcCCCCCCCeEEEEEEcCcChHHHHHHHHHhccCCCCCCCceEEEEEEEEEEEecC
Q 003790          677 KKGQYLGIMICNHACRTVQSAQVVAPRAEYDDNTMDMLLVHGSGRLRLARFFLLLQMGRHLSLPYVEYVKVKSVKIKAGK  756 (795)
Q Consensus       677 ieG~Fv~v~v~N~~~~~~~~d~~lAP~A~l~DG~LDLvlV~~~sR~~Ll~~l~~~~~G~hl~~P~V~~ikvka~rIep~~  756 (795)
                      +++++++++++|..+  .+..+.++|.|.++||.||+++++..++++|+++|..+..|+|+..|.|.|+++++++|++. 
T Consensus       187 ~~~~~~~~~v~n~~~--~ggg~~i~p~a~~~DG~l~v~~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~~-  263 (312)
T d2qv7a1         187 FQGEALLFFLGLTNS--MAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSF-  263 (312)
T ss_dssp             EEEEEEEEEEESSCC--CSSCSCSSTTCCSSSSCEEEEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEECS-
T ss_pred             eecceeeeeeecccc--cCCCCccCCccccccCcceEEEEcCCCHHHHHHHHHHHhcCCcCCCCCEEEEEeCEEEEEeC-
Confidence            456788888999887  48889999999999999999999999999999999999999999999999999999999986 


Q ss_pred             CCCCceeecCceeecCeeEEEeeecccccccc
Q 003790          757 HTHNSCGIDGELFPLNGQVISSLLPEQCRLIG  788 (795)
Q Consensus       757 ~~~~~i~VDGE~ip~~~~V~~~vlP~~~rlig  788 (795)
                       .+..+++|||++. ..+++++++|++++|+-
T Consensus       264 -~~~~~~iDGE~~~-~~p~~i~v~p~al~vlv  293 (312)
T d2qv7a1         264 -TDLQLNVDGEYGG-KLPANFLNLERHIDVFA  293 (312)
T ss_dssp             -SCCEEEETTEEEE-ESCEEEEEEEEEEEEEC
T ss_pred             -CCCEEEEcCCCCC-CCceEEEEECCEEEEEC
Confidence             4677999999995 45899999999999985

PyMOL of d2qv7a1

>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure