Citrus Sinensis ID: 003897

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------79

MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYLQEAKKLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVIEYLF

ccccccccccccccccccccccccccEEEEEccEEEEccEEEcccccccEEEccccccccccccccccEEEEcccccccccccEEEcccccccEEEEEEEEccccccccccccccccccccEEEEEEccccccccEEEEEEEEEccEEEEEcccccccEEEEEEcccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEEcccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEcEEEHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccEEEEcccccccHHHHcccccccccEEEEEEcccccccccccccccccccEEEEEEcccccEEEEEEEccccccccccccccccccccccEEEEEcccccccccccccccccccEEEEEEEccccEEEEccccccEEEEEccccEEEEEEEcEEEccccccccEEEEEEEEEEEEcccccEEEEEEEccccEEEEEEEEcEEEEEEEEccccEEEEccEEEEEEEEccEEEEEEEcccccccEEEEEEc

cccccccccccccccccccccccccccEEEcccEEEEccEEEEccccccEEEEccccccccccccccccEEEEEccccccccEEEEcccccccEEEEEEEEEEEHHccccccccccccHHHHEEEEEcccccccEEEEEEEEccccEEEEEEcccccEEEEEEEccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccHHHcccccHHHHccccccHHHHHccccHHHHHHHHHHHHHcccccEEEEEEccccEccccccccccccccccccccHHHHHHcccHHHHHHHccccccccccccccHHHHHHHHHHHHcccccEEEEEHHHHccccccccccccHHHcccEEccccccccccccccccHcHHHcccccEccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccEEEccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccccEEccccccccccHHccccccccccEEEEEEEcccccEEEEEEEccccccccccccccccccccccEEEEEcHHHccccccccccccccccEEEEEEEcccEEEEEcccccEEEEEccccEEEEEEEEEEEcccccccccEEEEEEEHcccccccEEEEEEEcccccEEEEEEEEcEEEEEEEcccccEEEEccEEEEEEEcccEEEEEEccccccccEEEEEEc

MAPSISKVASGVrtlvdgsdnqstniditledsklhanghvflsdvpdnvtltpstatateksvfsnvgsfigfdsfepksrhvvpigklkniRFMSIFRFKVWWTTHwvgsngrdlenetQLVIldnstdtgrpyVLLLpivegpfraslqpgaddyVDVCvesgstkvtgdsFRSVVYVHLGDDPFKLVKDAMRVVRSHLgtfklldektpppivdkfgwctwdafyltvqphgvmegvkglvdggcppglvliddgwqsishdedpidseginrtaageqmpcrllryqenfkfrdyvspnggdssdnkgmGAFIRDLKDEFKTVDQVYVWHALCGywgglrpnipglpekttvvkpklspgleltmeDLAVDKIvnngvgfvppelVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIAlgrvgddfwctdpsgdpngtfwlqgCHMVHCAynslwmgnfihpdwdmfqsthpcaefhaasraisggpiyvsdcvgkhnfpllkrlsmpdgsilrceyyalptrdclfadplhdgktMLKIWNLNKytgvigafncqgggwcrearrntcasqfsqkvtaktnpndiewnsgknpisiEGVQVFAMYLQEAKKLVlskpyenieislepfSFELITVSAvtllpggtspsvqfapigLVNMLntggaiqslsydddensveiGVKGSgemrvfasekprackidgnevafeyEGHMVAiqvpwsspsglsVIEYLF

mapsiskvasgvrtlvdgsdnqstNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFigfdsfepksrhvvpigklknirFMSIFRFKVWWTTHWVgsngrdleneTQLVILdnstdtgrPYVLLLPIVEGPFRASLQPGADDYVDVCVESgstkvtgdsfrSVVYVHLGDDPFKLVKDAMRVVRSHLgtfklldektpppIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVspnggdssdnkGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPllkrlsmpdgSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFsqkvtaktnpndiewnsgknPISIEGVQVFAMYLQEAKKLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAiqvpwsspsglsvIEYLF

***************************ITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSI********************MPCRLLRYQENFKFRDYV************MGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVT******DIEWNSGKNPISIEGVQVFAMYLQEAKKLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYD*******IGV******RVFAS*KPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVIEY**

***************************ITLEDSKLHANGHVFLSDVPDNVTLTPS*A*****SVFSNVGSFIGF*******RHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVR****************IVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDS******AAGEQMPCRLLRYQE*********************GAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYLQEAKKLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVIEYLF

********************NQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYLQEAKKLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVIEYLF

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		788	2.2.26 [Sep-21-2011]
Q9FND9		783	Probable galactinol--sucr	yes	no	0.965	0.971	0.715	0.0
Q8VWN6		798	Galactinol--sucrose galac	N/A	no	0.988	0.976	0.649	0.0
Q5VQG4		783	Galactinol--sucrose galac	yes	no	0.975	0.982	0.648	0.0
Q93XK2		853	Stachyose synthase OS=Pis	N/A	no	0.950	0.878	0.423	0.0
Q8RX87		749	Probable galactinol--sucr	no	no	0.887	0.933	0.406	1e-156
Q94A08		773	Probable galactinol--sucr	no	no	0.904	0.922	0.375	1e-152
Q84VX0		754	Probable galactinol--sucr	no	no	0.903	0.944	0.392	1e-146
Q9SYJ4		876	Probable galactinol--sucr	no	no	0.604	0.543	0.476	1e-131
Q97U94		648	Alpha-galactosidase OS=Su	yes	no	0.469	0.570	0.274	2e-30

>sp\|Q9FND9\|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1	Back alignment and function desciption

 Score = 1154 bits (2984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/784 (71%), Positives = 639/784 (81%), Gaps = 23/784 (2%)

Query: 19  SDNQSTNIDIT----LEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNV--GSFI 72
           SD+    +D T    LEDS L ANG V L+DVP NVTLT S     +  V  +V  GSFI
Sbjct: 9   SDSGINGVDFTEKFRLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVPLDVSAGSFI 68

Query: 73  GFD-SFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTD 131
           GF+   EPKS HV  IGKLKNIRFMSIFRFKVWWTTHWVGSNGRD+ENETQ++ILD S  
Sbjct: 69  GFNLDGEPKSHHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQIIILDQSGS 128

Query: 132 TG-------RPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLG 184
                    RPYVLLLP++EG FR+S Q G DD V VCVESGST+VTG  FR +VYVH G
Sbjct: 129 DSGPGSGSGRPYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEFRQIVYVHAG 188

Query: 185 DDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGL 244
           DDPFKLVKDAM+V+R H+ TFKLL+EK+PP IVDKFGWCTWDAFYLTV P GV +GVK L
Sbjct: 189 DDPFKLVKDAMKVIRVHMNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPDGVHKGVKCL 248

Query: 245 VDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPN 304
           VDGGCPPGLVLIDDGWQSI HD D ID EG+N T AGEQMPCRLL+++EN KF+DYVSP 
Sbjct: 249 VDGGCPPGLVLIDDGWQSIGHDSDGIDVEGMNITVAGEQMPCRLLKFEENHKFKDYVSPK 308

Query: 305 GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSP 364
                ++ GM AF+RDLKDEF TVD +YVWHALCGYWGGLRP  P LP  +T+++P+LSP
Sbjct: 309 ---DQNDVGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALP-PSTIIRPELSP 364

Query: 365 GLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCEN 424
           GL+LTMEDLAVDKI+  G+GF  P+L  + YEGLHSHL+  GIDGVKVDVIH+LE+LC+ 
Sbjct: 365 GLKLTMEDLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQK 424

Query: 425 YGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDP 484
           YGGRVDLAKAY+KALT+SV KHF GNGVIASMEHCNDFM LGTEAI+LGRVGDDFWCTDP
Sbjct: 425 YGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDP 484

Query: 485 SGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVS 544
           SGDPNGTFWLQGCHMVHCAYNSLWMGNFI PDWDMFQSTHPCAEFHAASRAISGGPIY+S
Sbjct: 485 SGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYIS 544

Query: 545 DCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIG 604
           DCVGKH+F LLKRL +P+GSILRCEYYALPTRD LF DPLHDGKTMLKIWNLNKYTGVIG
Sbjct: 545 DCVGKHDFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYTGVIG 604

Query: 605 AFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYLQEAK 664
           AFNCQGGGWCRE RRN C S+    +TA T+P D+EWNSG +PISI  V+ FA++L ++K
Sbjct: 605 AFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEWNSGSSPISIANVEEFALFLSQSK 664

Query: 665 KLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLS 724
           KL+LS   +++E++LEPF FELITVS V  + G    SV+FAPIGLVNMLNT GAI+SL 
Sbjct: 665 KLLLSGLNDDLELTLEPFKFELITVSPVVTIEGN---SVRFAPIGLVNMLNTSGAIRSLV 721

Query: 725 YDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVI 784
           Y+D+  SVE+GV G+GE RV+AS+KP +C IDG  V F YE  MV +QVPWS P GLS I
Sbjct: 722 YNDE--SVEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMVQVPWSGPDGLSSI 779

Query: 785 EYLF 788
           +YLF
Sbjct: 780 QYLF 783

Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 2

>sp\|Q8VWN6\|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q5VQG4\|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q93XK2\|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1	Back alignment and function description

>sp\|Q8RX87\|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2	Back alignment and function description

>sp\|Q94A08\|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2	Back alignment and function description

>sp\|Q84VX0\|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1	Back alignment and function description

>sp\|Q9SYJ4\|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=3	Back alignment and function description

>sp\|Q97U94\|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		788
224133028		783	predicted protein [Populus trichocarpa]	0.989	0.996	0.802	0.0
255567355		787	Stachyose synthase precursor, putative [	0.991	0.992	0.798	0.0
224131914		775	predicted protein [Populus trichocarpa]	0.950	0.966	0.799	0.0
225452378		775	PREDICTED: galactinol--sucrose galactosy	0.978	0.994	0.775	0.0
449446690		784	PREDICTED: probable galactinol--sucrose	0.988	0.993	0.745	0.0
4106395		784	raffinose synthase [Cucumis sativus]	0.988	0.993	0.741	0.0
224093196		750	predicted protein [Populus trichocarpa]	0.897	0.942	0.808	0.0
348162129		793	raffinose synthase [Boea hygrometrica]	0.991	0.984	0.716	0.0
147820188		762	hypothetical protein VITISV_021070 [Viti	0.961	0.994	0.744	0.0
224133642		765	predicted protein [Populus trichocarpa]	0.967	0.996	0.723	0.0

>gi\|224133028\|ref\|XP_002327943.1\| predicted protein [Populus trichocarpa] gi\|222837352\|gb\|EEE75731.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1314 bits (3400), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/791 (80%), Positives = 693/791 (87%), Gaps = 11/791 (1%)

Query: 1   MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATAT 60
           M PS+ K  SG    VDG +N S    I+LE S    NGH+FLSDVPDN+TL+PS AT T
Sbjct: 1   MVPSVRKSGSGASGPVDG-NNPSL---ISLEGSNFVVNGHIFLSDVPDNITLSPSPATLT 56

Query: 61  EKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENE 120
           EK++  N GSF+GFDS E K RHVV IGKLK+I+FMSIFRFKVWWTTHWVGSNGRDLE+E
Sbjct: 57  EKTICDNAGSFVGFDSKESKDRHVVHIGKLKSIKFMSIFRFKVWWTTHWVGSNGRDLEHE 116

Query: 121 TQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVY 180
           TQ+V+LD S D+GRPYVLLLP++EGPFRASLQPG DD VDVCVESGSTKV G  FRSVVY
Sbjct: 117 TQIVMLDKSDDSGRPYVLLLPLIEGPFRASLQPGDDDNVDVCVESGSTKVCGAGFRSVVY 176

Query: 181 VHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEG 240
           +H GDDP+ LVK+AM  VR HLGTFKLL+EKTPP IVDKFGWCTWDAFYL V P GV +G
Sbjct: 177 LHAGDDPYNLVKEAMEAVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLNVHPQGVWDG 236

Query: 241 VKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRT-AAGEQMPCRLLRYQENFKFRD 299
           VKGLVDGGCPPGLVLIDDGWQSISHDED I  EG+N    AGEQMPCRL+R+QEN+KFRD
Sbjct: 237 VKGLVDGGCPPGLVLIDDGWQSISHDEDLITEEGMNAAVGAGEQMPCRLVRFQENYKFRD 296

Query: 300 YVSPNG-GDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVV 358
           Y S       +DNKGMGAFI+DLK+EF TVD VYVWHALCGYWGGLRPN+PGLP  T VV
Sbjct: 297 YESHKSLAAGADNKGMGAFIKDLKEEFNTVDYVYVWHALCGYWGGLRPNVPGLP-PTQVV 355

Query: 359 KPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL 418
           KPKLSPGLE+TMEDLAVDKIVNNGVG VPPE+V QMY+G+HSHL KVGIDGVKVDVIHLL
Sbjct: 356 KPKLSPGLEMTMEDLAVDKIVNNGVGLVPPEIVYQMYDGIHSHLAKVGIDGVKVDVIHLL 415

Query: 419 EILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDD 478
           E+LCE+YGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFM LGTEAI+LGRVGDD
Sbjct: 416 EMLCEDYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMFLGTEAISLGRVGDD 475

Query: 479 FWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISG 538
           FWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISG
Sbjct: 476 FWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISG 535

Query: 539 GPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNK 598
           GPIYVSD VGKHNFPLL+RL +PDGSILRC Y+ALPTRDCLF DPLHDG TMLKIWNLNK
Sbjct: 536 GPIYVSDSVGKHNFPLLRRLVLPDGSILRCNYHALPTRDCLFEDPLHDGNTMLKIWNLNK 595

Query: 599 YTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAM 658
           +TGVIG FNCQGGGWCRE RRN CA+QFS  VTAKTNP DIEWNSGKNPISIEGVQ+FAM
Sbjct: 596 FTGVIGTFNCQGGGWCRETRRNKCAAQFSHSVTAKTNPRDIEWNSGKNPISIEGVQIFAM 655

Query: 659 YLQEAKKLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGG 718
           YL ++KKLVLSK +ENIEI+LEPF+FELITVS VT L G  +   QFAPIGLVNMLNTGG
Sbjct: 656 YLSKSKKLVLSKAHENIEIALEPFNFELITVSPVTTLAGKPA---QFAPIGLVNMLNTGG 712

Query: 719 AIQSLSYDDDEN-SVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSS 777
           AIQSL+Y +D N SV+IG+KGSGEMRVFASEKPR+CKIDG +VAFEYEG+MV  QVPWS 
Sbjct: 713 AIQSLAYTNDSNSSVQIGIKGSGEMRVFASEKPRSCKIDGRDVAFEYEGYMVVTQVPWSP 772

Query: 778 PSGLSVIEYLF 788
           PSGLS ++YLF
Sbjct: 773 PSGLSTVDYLF 783

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255567355\|ref\|XP_002524657.1\| Stachyose synthase precursor, putative [Ricinus communis] gi\|223536018\|gb\|EEF37676.1\| Stachyose synthase precursor, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224131914\|ref\|XP_002328139.1\| predicted protein [Populus trichocarpa] gi\|222837654\|gb\|EEE76019.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225452378\|ref\|XP_002275628.1\| PREDICTED: galactinol--sucrose galactosyltransferase [Vitis vinifera] gi\|296087624\|emb\|CBI34880.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449446690\|ref\|XP_004141104.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 5-like [Cucumis sativus] gi\|124057819\|gb\|ABD72603.1\| raffinose synthase [Cucumis sativus]	Back alignment and taxonomy information

>gi\|4106395\|gb\|AAD02832.1\| raffinose synthase [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224093196\|ref\|XP_002309828.1\| predicted protein [Populus trichocarpa] gi\|222852731\|gb\|EEE90278.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|348162129\|gb\|AEP68101.1\| raffinose synthase [Boea hygrometrica]	Back alignment and taxonomy information

>gi\|147820188\|emb\|CAN60422.1\| hypothetical protein VITISV_021070 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224133642\|ref\|XP_002321625.1\| predicted protein [Populus trichocarpa] gi\|222868621\|gb\|EEF05752.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		788
TAIR\|locus:2170528		783	SIP1 "AT5G40390" [Arabidopsis	0.965	0.971	0.720	1.50000000019e-314
UNIPROTKB\|Q5VQG4		783	RFS "Galactinol--sucrose galac	0.975	0.982	0.649	4.5e-288
UNIPROTKB\|Q93XK2		853	STS1 "Stachyose synthase" [Pis	0.605	0.559	0.505	1.8e-196
TAIR\|locus:2141425		876	STS "AT4G01970" [Arabidopsis t	0.604	0.543	0.474	2.5e-188
TAIR\|locus:2020452		754	SIP1 "AT1G55740" [Arabidopsis	0.899	0.940	0.400	5.3e-143
TAIR\|locus:2103488		773	SIP2 "AT3G57520" [Arabidopsis	0.559	0.570	0.390	4.4e-90
UNIPROTKB\|G4NBB7		908	MGG_11554 "Seed imbibition pro	0.365	0.317	0.288	6.5e-28
UNIPROTKB\|Q97U94		648	galS "Alpha-galactosidase" [Su	0.151	0.183	0.390	7.4e-28
ASPGD\|ASPL0000010056		863	aglF [Emericella nidulans (tax	0.282	0.258	0.304	5.3e-25
UNIPROTKB\|Q8A170		693	BT_3797 "Possible alpha-galact	0.115	0.131	0.358	2.3e-10

TAIR\|locus:2170528 SIP1 "AT5G40390" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3017 (1067.1 bits), Expect = 1.5e-314, P = 1.5e-314
 Identities = 565/784 (72%), Positives = 644/784 (82%)

Query:    19 SDNQSTNIDIT----LEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNV--GSFI 72
             SD+    +D T    LEDS L ANG V L+DVP NVTLT S     +  V  +V  GSFI
Sbjct:     9 SDSGINGVDFTEKFRLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVPLDVSAGSFI 68

Query:    73 GFD-SFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNS-T 130
             GF+   EPKS HV  IGKLKNIRFMSIFRFKVWWTTHWVGSNGRD+ENETQ++ILD S +
Sbjct:    69 GFNLDGEPKSHHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQIIILDQSGS 128

Query:   131 DTG------RPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLG 184
             D+G      RPYVLLLP++EG FR+S Q G DD V VCVESGST+VTG  FR +VYVH G
Sbjct:   129 DSGPGSGSGRPYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEFRQIVYVHAG 188

Query:   185 DDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGL 244
             DDPFKLVKDAM+V+R H+ TFKLL+EK+PP IVDKFGWCTWDAFYLTV P GV +GVK L
Sbjct:   189 DDPFKLVKDAMKVIRVHMNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPDGVHKGVKCL 248

Query:   245 VDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPN 304
             VDGGCPPGLVLIDDGWQSI HD D ID EG+N T AGEQMPCRLL+++EN KF+DYVSP 
Sbjct:   249 VDGGCPPGLVLIDDGWQSIGHDSDGIDVEGMNITVAGEQMPCRLLKFEENHKFKDYVSPK 308

Query:   305 GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSP 364
               D +D  GM AF+RDLKDEF TVD +YVWHALCGYWGGLRP  P LP  +T+++P+LSP
Sbjct:   309 --DQND-VGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALPP-STIIRPELSP 364

Query:   365 GLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCEN 424
             GL+LTMEDLAVDKI+  G+GF  P+L  + YEGLHSHL+  GIDGVKVDVIH+LE+LC+ 
Sbjct:   365 GLKLTMEDLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQK 424

Query:   425 YGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDP 484
             YGGRVDLAKAY+KALT+SV KHF GNGVIASMEHCNDFM LGTEAI+LGRVGDDFWCTDP
Sbjct:   425 YGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDP 484

Query:   485 SGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVS 544
             SGDPNGTFWLQGCHMVHCAYNSLWMGNFI PDWDMFQSTHPCAEFHAASRAISGGPIY+S
Sbjct:   485 SGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYIS 544

Query:   545 DCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIG 604
             DCVGKH+F LLKRL +P+GSILRCEYYALPTRD LF DPLHDGKTMLKIWNLNKYTGVIG
Sbjct:   545 DCVGKHDFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYTGVIG 604

Query:   605 AFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYLQEAK 664
             AFNCQGGGWCRE RRN C S+    +TA T+P D+EWNSG +PISI  V+ FA++L ++K
Sbjct:   605 AFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEWNSGSSPISIANVEEFALFLSQSK 664

Query:   665 KLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLS 724
             KL+LS   +++E++LEPF FELITVS V  + G    SV+FAPIGLVNMLNT GAI+SL 
Sbjct:   665 KLLLSGLNDDLELTLEPFKFELITVSPVVTIEGN---SVRFAPIGLVNMLNTSGAIRSLV 721

Query:   725 YDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVI 784
             Y+D+  SVE+GV G+GE RV+AS+KP +C IDG  V F YE  MV +QVPWS P GLS I
Sbjct:   722 YNDE--SVEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMVQVPWSGPDGLSSI 779

Query:   785 EYLF 788
             +YLF
Sbjct:   780 QYLF 783

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005986 "sucrose biosynthetic process" evidence=IMP

GO:0010325 "raffinose family oligosaccharide biosynthetic process" evidence=IMP

GO:0019593 "mannitol biosynthetic process" evidence=IMP

GO:0047274 "galactinol-sucrose galactosyltransferase activity" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

UNIPROTKB\|Q5VQG4 RFS "Galactinol--sucrose galactosyltransferase" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

UNIPROTKB\|Q93XK2 STS1 "Stachyose synthase" [Pisum sativum (taxid:3888)]	Back alignment and assigned GO terms

TAIR\|locus:2141425 STS "AT4G01970" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2020452 SIP1 "AT1G55740" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2103488 SIP2 "AT3G57520" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|G4NBB7 MGG_11554 "Seed imbibition protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

UNIPROTKB\|Q97U94 galS "Alpha-galactosidase" [Sulfolobus solfataricus P2 (taxid:273057)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000010056 aglF [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8A170 BT_3797 "Possible alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5VQG4	RFS_ORYSJ	2, ., 4, ., 1, ., 8, 2	0.6483	0.9758	0.9821	yes	no
Q8VWN6	RFS_PEA	2, ., 4, ., 1, ., 8, 2	0.6496	0.9885	0.9761	N/A	no
Q9FND9	RFS5_ARATH	2, ., 4, ., 1, ., 8, 2	0.7155	0.9657	0.9719	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.82	0.991
3rd Layer	2.4.1	0.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		788
PLN02711		777	PLN02711, PLN02711, Probable galactinol--sucrose g	0.0
pfam05691		742	pfam05691, Raffinose_syn, Raffinose synthase or se	0.0
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	0.0
PLN02355		758	PLN02355, PLN02355, probable galactinol--sucrose g	0.0
PLN02684		750	PLN02684, PLN02684, Probable galactinol--sucrose g	0.0
PLN02219		775	PLN02219, PLN02219, probable galactinol--sucrose g	0.0
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	1e-103
COG3345		687	COG3345, GalA, Alpha-galactosidase [Carbohydrate t	0.002

>gnl\|CDD\|215381 PLN02711, PLN02711, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

 Score = 1598 bits (4139), Expect = 0.0
 Identities = 649/789 (82%), Positives = 698/789 (88%), Gaps = 13/789 (1%)

Query: 1   MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATAT 60
           MAPS+SK  SG   LVDG +       ITLE S   ANGH FLSDVPDN+TLTPS     
Sbjct: 1   MAPSLSKSNSGAMGLVDGLNPSL----ITLEGSNFLANGHPFLSDVPDNITLTPSPYLPD 56

Query: 61  EKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENE 120
            K +    GSF+GFD+ EPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRD+ENE
Sbjct: 57  NKPITVGAGSFVGFDAGEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDVENE 116

Query: 121 TQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVY 180
           TQ++ILD S D+GRPYVLLLP++EGPFRASLQPG DD VD+CVESGSTKV G  FRSV+Y
Sbjct: 117 TQMMILDKS-DSGRPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTKVCGSEFRSVLY 175

Query: 181 VHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEG 240
           +H GDDP+KLVKDAM+VVR HLGTFKLL+EKTPP IVDKFGWCTWDAFYLTV P GV EG
Sbjct: 176 MHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEG 235

Query: 241 VKGLVDGGCPPGLVLIDDGWQSISHDEDPI-DSEGINRTAAGEQMPCRLLRYQENFKFRD 299
           VKGLVDGGCPPGLVLIDDGWQSI HDEDPI D EG+NRT AGEQMPCRLL+++EN+KFRD
Sbjct: 236 VKGLVDGGCPPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRD 295

Query: 300 YVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVK 359
           YVSP       NKGMGAFIRDLK+EFKTVD VYVWHALCGYWGGLRPN+PGLPE + VV 
Sbjct: 296 YVSPKS---LSNKGMGAFIRDLKEEFKTVDYVYVWHALCGYWGGLRPNVPGLPE-SKVVA 351

Query: 360 PKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLE 419
           PKLSPGL++TMEDLAVDKIVNNGVG VPPEL  QMYEGLHSHL+ VGIDGVKVDVIHLLE
Sbjct: 352 PKLSPGLKMTMEDLAVDKIVNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKVDVIHLLE 411

Query: 420 ILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDF 479
           +LCE YGGRV+LAKAYYKALTASVRKHF GNGVIASMEHCNDFM LGTEAI+LGRVGDDF
Sbjct: 412 MLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDF 471

Query: 480 WCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGG 539
           WCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGG
Sbjct: 472 WCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGG 531

Query: 540 PIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKY 599
           PIYVSD VGKHNFPLLKRL +PDGSILRC+YYALPTRDCLF DPLHDGKTMLKIWNLNK+
Sbjct: 532 PIYVSDSVGKHNFPLLKRLVLPDGSILRCQYYALPTRDCLFEDPLHDGKTMLKIWNLNKF 591

Query: 600 TGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMY 659
           TGVIGAFNCQGGGWCRE RRN CASQFS  VTAK +P DIEWNSGK+PISIEGVQVFA+Y
Sbjct: 592 TGVIGAFNCQGGGWCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIEGVQVFAVY 651

Query: 660 LQEAKKLVLSKPYENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGA 719
           L ++KKLVLSKP EN+EISLEPF+FELITVS VT LPG    S+QFAPIGLVNMLNTGGA
Sbjct: 652 LFQSKKLVLSKPSENLEISLEPFNFELITVSPVTTLPG---KSIQFAPIGLVNMLNTGGA 708

Query: 720 IQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPS 779
           IQSL+YDD E+SV+IGVKGSGEMRVFASEKPR+CKIDG EV F YE  MV +QVPWS  S
Sbjct: 709 IQSLAYDDAESSVQIGVKGSGEMRVFASEKPRSCKIDGEEVEFGYEDCMVVVQVPWSGSS 768

Query: 780 GLSVIEYLF 788
           GLS+IEYLF
Sbjct: 769 GLSLIEYLF 777

Length = 777

>gnl\|CDD\|218695 pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|215203 PLN02355, PLN02355, probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>gnl\|CDD\|166325 PLN02684, PLN02684, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|165863 PLN02219, PLN02219, probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		788
PLN02982		865	galactinol-raffinose galactosyltransferase/ghydrol	100.0
PLN02711		777	Probable galactinol--sucrose galactosyltransferase	100.0
PLN02219		775	probable galactinol--sucrose galactosyltransferase	100.0
PLN02684		750	Probable galactinol--sucrose galactosyltransferase	100.0
PLN02355		758	probable galactinol--sucrose galactosyltransferase	100.0
PF05691		747	Raffinose_syn: Raffinose synthase or seed imbibiti	100.0
PLN02692		412	alpha-galactosidase	100.0
PLN02229		427	alpha-galactosidase	100.0
PLN02808		386	alpha-galactosidase	100.0
PLN03231		357	putative alpha-galactosidase; Provisional	99.96
PLN02899		633	alpha-galactosidase	99.95
KOG2366		414	consensus Alpha-D-galactosidase (melibiase) [Carbo	99.87
PF02065		394	Melibiase: Melibiase; InterPro: IPR000111 O-Glycos	99.83
COG3345		687	GalA Alpha-galactosidase [Carbohydrate transport a	99.69
cd06592		303	GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact	99.39
cd06593		308	GH31_xylosidase_YicI YicI alpha-xylosidase is a gl	99.0
PRK10658		665	putative alpha-glucosidase; Provisional	98.85
cd06598		317	GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide	98.68
PRK10426		635	alpha-glucosidase; Provisional	98.63
cd06599		317	GH31_glycosidase_Aec37 Glycosyl hydrolase family 3	98.63
PF01055		441	Glyco_hydro_31: Glycosyl hydrolases family 31 ; In	98.54
cd06591		319	GH31_xylosidase_XylS XylS is a glycosyl hydrolase	98.51
cd06595		292	GH31_xylosidase_XylS-like This family represents a	98.46
cd06594		317	GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl	98.45
cd06602		339	GH31_MGAM_SI_GAA This family includes the followin	98.41
cd06604		339	GH31_glucosidase_II_MalA Alpha-glucosidase II (alp	98.4
cd06597		340	GH31_transferase_CtsY CtsY (cyclic tetrasaccharide	98.36
cd06600		317	GH31_MGAM-like This family includes the following	98.31
cd06589		265	GH31 The enzymes of glycosyl hydrolase family 31 (	98.29
COG1501		772	Alpha-glucosidases, family 31 of glycosyl hydrolas	98.11
cd06601		332	GH31_lyase_GLase GLases (alpha-1,4-glucan lyases)	98.06
PF10566		273	Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro:	98.05
cd06603		339	GH31_GANC_GANAB_alpha This family includes the clo	97.96
PLN02763		978	hydrolase, hydrolyzing O-glycosyl compounds	97.92
KOG1065		805	consensus Maltase glucoamylase and related hydrola	96.75
PF13200		316	DUF4015: Putative glycosyl hydrolase domain	83.07
TIGR01515		613	branching_enzym alpha-1,4-glucan:alpha-1,4-glucan	82.92

>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

Probab=100.00  E-value=1.3e-221  Score=1863.03  Aligned_cols=750  Identities=52%  Similarity=0.971  Sum_probs=708.2

Q ss_pred             eeeeeecCCeEEEcceeeecCCCCcEEEccCCccccccccc-----------cCccccccccCCCCCcceeeeccccCcc
Q 003897           25 NIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVF-----------SNVGSFIGFDSFEPKSRHVVPIGKLKNI   93 (788)
Q Consensus        25 ~~~~~~~~g~l~v~~~~~l~~~~~~v~~~~~~~~~~~~~~~-----------~~~g~~~g~~~~~~~~~~~~~lG~~~~~   93 (788)
                      ...|+|+||+|+|+|+++|++||+||++||+++.+. ++++           +..|+|+||++++|+|||+++||+++++
T Consensus        21 ~~~~~l~~g~l~v~G~~~L~~Vp~NV~~tp~s~~~~-~~~~p~~~~~~~~~~~~~g~FlG~~~~~~~srhv~~lG~l~~~   99 (865)
T PLN02982         21 PNYFDLSDGKLSVKGVPLLSDVPNNVTFTPFSSISI-SSDAPLPLLQRVQSNSHKGGFLGFTKESPSDRLTNSLGKFEGR   99 (865)
T ss_pred             CceeEecCCeEEECCEEeecCCCCceEecCcccccc-cccCccccccccccccccceEEeeecCCCccceeeecccccCc
Confidence            558999999999999999999999999999887652 2333           2679999999999999999999999999


Q ss_pred             eeEEeeeecccccccccCCCCCCCCccceEEEEEcCCCCCccEEEEEEeeeCCeEEEecCCCCCcEEEEEEcCCcccccc
Q 003897           94 RFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGD  173 (788)
Q Consensus        94 r~~al~R~k~wW~~pr~G~~~~~l~~etq~ll~~~~~~~~~~y~vlLp~~~~~~~~~L~~~~~~~~~i~~~sg~~~v~~~  173 (788)
                      |||||||||+||||||+|++++|||.||||||+|.++  ...|+|+|||++|+|||+||++.+++++||+|||+++|+++
T Consensus       100 rFms~FRfK~WWmt~~vG~~G~Dip~ETQ~llle~~~--~~~Yvv~lP~ieG~FRa~Lqg~~~~~~~ic~ESg~~~V~~s  177 (865)
T PLN02982        100 DFLSIFRFKTWWSTMWIGSSGSDLQMETQWVLLKVPE--IDSYVLIIPLIEGSFRSALHPGEDGHVMICAESGSTKVKAS  177 (865)
T ss_pred             eEEeeeehhhhccchhhcCCCCCCChhheEEEEEcCC--CceEEEEEEecCCceEEEecCCCCCCEEEEEecCCcccccc
Confidence            9999999999999999999999999999999999997  45899999999999999999999999999999999999999


Q ss_pred             ccceEEEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcE
Q 003897          174 SFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGL  253 (788)
Q Consensus       174 ~~~~~~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~  253 (788)
                      ++.+++|||+|+|||++|++|++++++|++||++||+|++|.++|+||||||||||++||+++|++++++|+++|+||+|
T Consensus       178 ~~~~~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~l~~gG~pprf  257 (865)
T PLN02982        178 SFNSIAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKALPKIVDKFGWCTWDAFYLTVDPVGVWHGVKEFAEGGVPPRF  257 (865)
T ss_pred             ccceEEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccCccccccceEEeechhhcccCHHHHHHHHHHHhcCCCCccE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccCCCCCCCCCC---C--------------------------
Q 003897          254 VLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSP---N--------------------------  304 (788)
Q Consensus       254 vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an~KFp~~~~~---~--------------------------  304 (788)
                      ||||||||++..|.++|.++.++++.+|+||.+||++|+||+||+++++.   +                          
T Consensus       258 vIIDDGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~En~KFrky~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~a~~  337 (865)
T PLN02982        258 LIIDDGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFDECEKFRNYKGGSMLGPDPPHFDPKKPKMLIYKAIEREHAEK  337 (865)
T ss_pred             EEEecchhhccccccCCchhhhhccccccchhhhhhcchhhhhhhccccccccCCCcccccccccchhhhcccchhhhhh
Confidence            99999999999876544455578899999999999999999999974320   0                          


Q ss_pred             ---------------------------------------------CCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeecc
Q 003897          305 ---------------------------------------------GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCG  339 (788)
Q Consensus       305 ---------------------------------------------~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~G  339 (788)
                                                                   ++++..+.|||++|++||++|++||||||||||+|
T Consensus       338 ~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Glk~~v~~ik~k~~~vk~VyVWHAL~G  417 (865)
T PLN02982        338 ARKKAIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVSSESESSGSCKVSGSGMKAFTRDLRTKFKGLDDIYVWHALCG  417 (865)
T ss_pred             cccccccccccccchhhhhhhhhhhhccccccccccccccccccccccccCcccHHHHHHHHHHhCCCCCEEEEeeeccC
Confidence                                                         01244567999999999999988999999999999


Q ss_pred             ccCccCCCCCCCCC-cceeeccCCCCCcccccccccccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchh
Q 003897          340 YWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL  418 (788)
Q Consensus       340 YWgGI~P~~~~~~~-~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l  418 (788)
                      |||||+|++   ++ ++++++|+.+||+.++|||+|+|+|..+|+++++|+++++|||+||+||+++||||||||+|+++
T Consensus       418 YWGGV~P~~---~~y~~k~~~p~~spg~~~~~~d~a~d~i~~~G~glv~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~L  494 (865)
T PLN02982        418 AWGGVRPGT---THLNAKVVPARLSPGLDGTMNDLAVDKIVEGGIGLVHPSQAGDFYDSMHSYLASVGITGVKVDVIHTL  494 (865)
T ss_pred             cccCcCCCC---CCCcceEEecccCccccccCcchhhhheecCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhH
Confidence            999999997   44 89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccCCcchhHHHHHHHHHHHHHhccCCCceeeecCCCccccccc-cccccccccccccccCCCCCCC---CCCccc
Q 003897          419 EILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLG-TEAIALGRVGDDFWCTDPSGDP---NGTFWL  494 (788)
Q Consensus       419 ~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~CMs~~~~~~~~~-~~~~~~~R~SDDf~p~dp~~~p---~w~~~s  494 (788)
                      +++++++|+|++|+++||+||++|++|||++|++|+||||+++++|++ +++++. |+||||||++|+++|   ||||  
T Consensus       495 e~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~~~~~~~tk~sav~-R~SDDF~p~dP~shp~g~~wlq--  571 (865)
T PLN02982        495 EYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCNDFFFLGTKQISMG-RVGDDFWFQDPNGDPMGVYWLQ--  571 (865)
T ss_pred             HHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCCcceee-eccccccCCCCCcCcccccccc--
Confidence            999999999999999999999999999999999999999999999854 566666 999999999999999   8997  


Q ss_pred             cchhHHHhhhhhhcccCCccCCcccccccCcchHHHHHHHHHcCCCeEEeeCCCCCChhhhhhhhCCCCceecccccCcc
Q 003897          495 QGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALP  574 (788)
Q Consensus       495 h~~Hi~~~a~Nsl~~g~~~~PDwDMF~S~h~~a~~HAaaRaisGgPVyvSD~pg~hd~~lL~~lv~pdG~ilR~~~pg~p  574 (788)
                       ++||++|||||||||+++|||||||||.||||+|||+|||||||||||||+||+|||+||||||+|||+||||++||+|
T Consensus       572 -~~Hi~~~AyNSLl~G~~v~PDWDMFqS~H~~A~fHAaaRAIsGGPIYvSD~pG~Hdf~lLk~LvlpDG~IlR~~~pg~P  650 (865)
T PLN02982        572 -GVHMIHCAYNSMWMGQIIQPDWDMFQSDHLCAEFHAGSRAICGGPVYVSDSVGGHDFDLLKKLVFPDGTIPRCQHYALP  650 (865)
T ss_pred             -ceeeeehhhhhHhhccccccCchhccccCchHHHHHHHHhhcCCCEEEeeCCCCccHHHHHhhhcCCCceeccCCCCCC
Confidence             9999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccccccCCCCcceEEEEecCCcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCCCCCcccCCce
Q 003897          575 TRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQ  654 (788)
Q Consensus       575 t~D~lf~dp~~d~~~lLki~n~~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~  654 (788)
                      ||||||.||++|++++|||||+|+++||||+|||||++|||+++|+++|++++.++|+.|+|+||+|.++++++.+..++
T Consensus       651 TrDcLF~DPl~DGks~LKIWN~Nk~~GViG~FNCQGagW~~~~~~~~~~~~~~~~vtg~v~~~Dve~~~~~~~a~~~~~~  730 (865)
T PLN02982        651 TRDCLFKNPLFDKKTILKIWNFNKFGGVIGAFNCQGAGWDPKEHRIKGYSECYKPVSGSVHVSDIEWDQKPEASQMGEAE  730 (865)
T ss_pred             CcchhccCcccCCceEEEEEeccCcCceEEEEEeccCCCCchhccccccCCCCcceEEEEcHHHcccccccccccCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999877766666778


Q ss_pred             eEEEEEecccEEEecCC-CCcEEEEecCCcEEEEEEEeeeecCCCCCCCeEEEEeehhhhccCccceeeeeeecC--CCe
Q 003897          655 VFAMYLQEAKKLVLSKP-YENIEISLEPFSFELITVSAVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDD--ENS  731 (788)
Q Consensus       655 ~~~vy~~~sg~l~~l~~-~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~~~~~A~iGL~~~~~~~~Av~~~~~~~~--~~~  731 (788)
                      +++||+|+++++.++.+ ++.++|+|++++|||||+|||+.+.++    ++||||||+||||+||||+++++.+.  +++
T Consensus       731 ~~~vY~~~~~el~~~~~~~~~~~vtL~~~e~elftv~PI~~~~~~----i~FApIGL~nM~NSgGAV~~~~~~~~g~~~~  806 (865)
T PLN02982        731 EYAVYLNQAEELLLMTPKSEAIQITLQPSSFELFSFVPVTKLGSS----AKFAPIGLTNMFNSGGTIQEMEYGESGGECS  806 (865)
T ss_pred             cEEEEEecCceEEEecCCCCcceEEeccceeEEEEEeeeEEccCC----cceeeeehHhhccCCceeEEeeeccCCccce
Confidence            99999999999999755 799999999999999999999998776    99999999999999999999998643  337


Q ss_pred             EEEEEEecceeeEEecCCCceeEeCCeEEeEEEcC-eEEEEEeeecC-CCCeeeeeEeC
Q 003897          732 VEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEG-HMVAIQVPWSS-PSGLSVIEYLF  788 (788)
Q Consensus       732 v~v~~k~~G~~~~y~s~~P~~~~v~g~~v~~~~~~-~~l~v~~~w~e-~~g~s~~~~~~  788 (788)
                      ++|+|||+|+|++|||.+|++|.|||.+|+|+|++ |+|+|+|||.| ++|+|+|+|+|
T Consensus       807 v~v~VrG~G~f~~Yss~~P~~c~vdg~ev~F~y~~~g~l~~~lp~~~~~~~~~~v~~~~  865 (865)
T PLN02982        807 VKVKVKGGGRFLAYSSEAPKKCYLNGKEVGFEWEEEGKLSFFVPWTEESGGISDVSFIF  865 (865)
T ss_pred             EEEEEEecceEEEEecCCCeEEEECCeEeeeEECCCCeEEEEccCCcccCceeeEEEeC
Confidence            99999999999999999999999999999999988 99999999999 99999999998

>PLN02711 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PLN02219 probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

>PLN02684 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PLN02355 probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins	Back alignment and domain information

>PLN02692 alpha-galactosidase	Back alignment and domain information

>PLN02229 alpha-galactosidase	Back alignment and domain information

>PLN02808 alpha-galactosidase	Back alignment and domain information

>PLN03231 putative alpha-galactosidase; Provisional	Back alignment and domain information

>PLN02899 alpha-galactosidase	Back alignment and domain information

>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase	Back alignment and domain information

>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose	Back alignment and domain information

>PRK10658 putative alpha-glucosidase; Provisional	Back alignment and domain information

>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY	Back alignment and domain information

>PRK10426 alpha-glucosidase; Provisional	Back alignment and domain information

>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37	Back alignment and domain information

>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate	Back alignment and domain information

>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus	Back alignment and domain information

>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride	Back alignment and domain information

>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase	Back alignment and domain information

>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities	Back alignment and domain information

>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ	Back alignment and domain information

>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II	Back alignment and domain information

>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase	Back alignment and domain information

>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end	Back alignment and domain information

>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB)	Back alignment and domain information

>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF13200 DUF4015: Putative glycosyl hydrolase domain	Back alignment and domain information

>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		788
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	2e-05
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	1e-04
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	5e-04
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 49.1 bits (116), Expect = 5e-06
 Identities = 59/411 (14%), Positives = 105/411 (25%), Gaps = 119/411 (28%)

Query: 265 HDEDPIDSEGINRTAAGE-QMPCR--LLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDL 321
           H    +D E       GE Q   +  L  +++ F   ++         D K +    + +
Sbjct: 2   HHHHHMDFE------TGEHQYQYKDILSVFEDAFV-DNF---------DCKDVQDMPKSI 45

Query: 322 --KDEFK-------TVDQVY--VWHALCGYW---------GGLRPNIPGLPEKTTVVKPK 361
             K+E          V       W  L               LR N   L     +   +
Sbjct: 46  LSKEEIDHIIMSKDAVSGTLRLFW-TLLSKQEEMVQKFVEEVLRINYKFLMSP--IKTEQ 102

Query: 362 LSPGLELTMEDLAVDKIVNNGVGFVP-----PELVDQMYEGLHS--HLEKVGIDGVKVDV 414
             P +   M     D++ N+   F        +   ++ + L      + V IDGV    
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL--- 159

Query: 415 IHLLEILCENYG-GRVDLAKAYYKALTASVRKHFKGNGVI-ASMEHCNDFMLLGTEAIAL 472
                      G G+  +A        +   +      +   ++++CN    +      L
Sbjct: 160 -----------GSGKTWVALD---VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205

Query: 473 GRVGDDFWCTDPSGDPNGTF---WLQG------CHMVHCAYNSL------WMGNFIHPD- 516
               D  W +      N       +Q           +   N L            +   
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE--NCLLVLLNVQ-----NAKA 258

Query: 517 WDMFQSTHPCAEFHA----ASRAIS-----GGPIYVSDCVGKHNFPLLKRLSMPD-GSIL 566
           W+ F                +R                 +  H+  L            L
Sbjct: 259 WNAF-------NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311

Query: 567 RCEYYALPTRDC--------LFADPLHDGKTMLKIW---NLNKYTGVIGAF 606
            C    LP            + A+ + DG      W   N +K T +I + 
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433	Back alignment and structure

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564	Back alignment and structure

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		788
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	100.0
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	100.0
1uas_A		362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	100.0
3hg3_A		404	Alpha-galactosidase A; glycoprotein, carbohydrate-	100.0
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	100.0
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	99.98
4do4_A		400	Alpha-N-acetylgalactosaminidase; pharmacological c	99.98
3a21_A		614	Putative secreted alpha-galactosidase; beta-alpha-	99.98
3lrk_A		479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	99.97
4fnq_A		729	Alpha-galactosidase AGAB; glycoside hydrolase, hyd	99.9
2xn2_A		732	Alpha-galactosidase; hydrolase, glycosidase; HET:	99.87
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	99.83
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	99.8
2f2h_A		773	Putative family 31 glucosidase YICI; BETA8alpha8 b	99.14
2g3m_A		693	Maltase, alpha-glucosidase; hydrolase, glycoside h	98.99
4ba0_A		817	Alpha-glucosidase, putative, ADG31B; hydrolase; HE	98.93
3lpp_A		898	Sucrase-isomaltase; glycoside hydrolase family 31,	98.74
3nsx_A		666	Alpha-glucosidase; structural genomics, PSI-2, pro	98.73
2xvl_A		1020	Alpha-xylosidase, putative, XYL31A; hydrolase, gly	98.73
3l4y_A		875	Maltase-glucoamylase, intestinal; glycoside hydrol	98.67
3a24_A		641	Alpha-galactosidase; glycoside hydrolase family 97	98.36
3top_A		908	Maltase-glucoamylase, intestinal; membrane, hydrol	97.91
2d73_A		738	Alpha-glucosidase SUSB; glycoside hydrolase family	97.49
2x2h_A		1027	Alpha-1,4-glucan lyase isozyme 1; anhydrofructose	96.77

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}	Back alignment and structure

Probab=100.00  E-value=5.3e-40  Score=368.74  Aligned_cols=375  Identities=17%  Similarity=0.199  Sum_probs=246.0

Q ss_pred             CcccccccccccccCHHHHHHHHHHh----HhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC
Q 003897          219 KFGWCTWDAFYLTVQPHGVMEGVKGL----VDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN  294 (788)
Q Consensus       219 ~~GWCTWdafy~~Vte~~V~~~l~~L----~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an  294 (788)
                      .||||||++||+++||++|++.++.|    ++.|+  ++|+||||||...++..   ..+....   .. ...+.++.++
T Consensus        13 p~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~--~~~~iDDgW~~~~~~~~---~y~~~~~---~~-~d~~G~~~~~   83 (433)
T 3cc1_A           13 PMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGW--EYIVVDIQWYEPTANSS---AYNPFAP---LC-MDEYGRLLPA   83 (433)
T ss_dssp             CEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTC--CEEEECSCTTCCCTTST---TCCTTSC---SC-BCTTSCBCCC
T ss_pred             CEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCC--eEEEECCCcCCCCCccc---ccccccc---cc-cCCCCCEeEC
Confidence            48999999999999999999999999    44555  59999999998754311   0000000   00 0124556665


Q ss_pred             -CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccc
Q 003897          295 -FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL  373 (788)
Q Consensus       295 -~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~  373 (788)
                       +|||+..        .+.||++++++||++ | +| +|+|+...-.+..+.|+++....+.             +..|+
T Consensus        84 ~~kFP~~~--------~~~Gl~~l~~~ih~~-G-lk-~Giw~~p~i~~~~v~~~s~~~~~~~-------------~~~di  139 (433)
T 3cc1_A           84 TNRFPSAK--------NGAGFKPLSDAIHDL-G-LK-FGIHIMRGIPRQAVYENSPVLGSTK-------------TAREI  139 (433)
T ss_dssp             TTTCGGGT--------TTTTTHHHHHHHHHT-T-CE-EEEEEESSEEHHHHHHTCBCTTSSC-------------BHHHH
T ss_pred             CccCCCcc--------cCCCHHHHHHHHHHc-C-Ce-eEEEeCCCCchhccCCCCccccccc-------------eeccc
Confidence             8899421        124999999999999 8 99 7999754211112344443211110             11111


Q ss_pred             ccccee------ccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhcc
Q 003897          374 AVDKIV------NNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHF  447 (788)
Q Consensus       374 a~~~i~------~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F  447 (788)
                      +.....      ..++++.+| ++++||+.++++|++|||||||+|+|+. ..+. .+  ..+..++|++||+++     
T Consensus       140 ~~~~~~~~~~~~~~~lD~~~p-~~~~~~~~~~~~l~~~GvDyvK~D~~~~-~~~~-~~--~~~~~~~~~~aL~~~-----  209 (433)
T 3cc1_A          140 AHTNSICPWNTDMYGVDPTKE-GAQSYYNSLFELYAQWGVDFVKVDDIAA-SRLY-DT--HLEEIKMIQRAIQAC-----  209 (433)
T ss_dssp             EETTCCBTTBTTEEEECTTST-THHHHHHHHHHHHHHTTCCEEEEESCSC-TTSS-CC--CHHHHHHHHHHHHHS-----
T ss_pred             ccCCcccCCCCCceeecCCCH-HHHHHHHHHHHHHHHcCCCEEEeCCccc-ccCC-cc--cHHHHHHHHHHHHhc-----
Confidence            110000      112455665 4999999999999999999999999976 2221 11  345566777777653     


Q ss_pred             CCCceeeecCCCccc----cccccccccccccccccccCCCCCCCCCCccccchhHHH-hhhhhhcccCCccCCcccccc
Q 003897          448 KGNGVIASMEHCNDF----MLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVH-CAYNSLWMGNFIHPDWDMFQS  522 (788)
Q Consensus       448 ~g~~iI~CMs~~~~~----~~~~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~~-~a~Nsl~~g~~~~PDwDMF~S  522 (788)
                       +++|+.|||+++..    .+..+..++| |+|||+|++++        .  ..||+. +++++.+.+...|||+|||+.
T Consensus       210 -gr~i~~slc~g~~~~~~~~~~~~~~n~w-R~s~D~~~~w~--------~--~~~~~~~~~~~~~~~~~g~~nD~Dml~v  277 (433)
T 3cc1_A          210 -GRPMVLSLSPGPAPIKYAHHFKTNANMW-RITDDFWDDWS--------L--LYQMFERCEVWEKHIGTGHWPDCGMLPL  277 (433)
T ss_dssp             -SSCCEEECCCSBSSEESCSSSCCTTGGG-CCEECCCSCHH--------H--HHHHHHHHHHHHHSCCCSCCCBCCCBCC
T ss_pred             -CCCEEEEecCCCCChhhhhhhhhhCcEE-EeccCccccHH--------H--HHHHHHHHHHHHhhcCCCccCChHHhcc
Confidence             88999999986322    2445778888 99999999865        2  456665 557888888899999999998


Q ss_pred             cC-------------------cchHHHHHHHHHcCCCeEEeeCCCCCChh---hhh-hhhC---CCCceecccccCccCc
Q 003897          523 TH-------------------PCAEFHAASRAISGGPIYVSDCVGKHNFP---LLK-RLSM---PDGSILRCEYYALPTR  576 (788)
Q Consensus       523 ~h-------------------~~a~~HAaaRaisGgPVyvSD~pg~hd~~---lL~-~lv~---pdG~ilR~~~pg~pt~  576 (788)
                      .|                   .+.++|+++||++++|+++||.+.+-+-+   ||+ +-++   +||..-|      |. 
T Consensus       278 g~~g~~~~~~~~~~~~~~lt~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL~N~eviavnqdg~~~~------~v-  350 (433)
T 3cc1_A          278 GHIGIRSVDGPGGDRWTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNR------FV-  350 (433)
T ss_dssp             SEECTTCSSSSSSSEECSSCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHCCHHHHHHHHHCEEEE------EE-
T ss_pred             cCccccccccccccccCCCCHHHHHHHHHHHHHhcCceEecCccccCCHHHHHHhcChhheeecCCCcCce------ee-
Confidence            75                   34577999999999999999998877644   443 1111   4554333      21 


Q ss_pred             cccccccCCCCcceEEEEec--CCcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCCCCCcccCCce
Q 003897          577 DCLFADPLHDGKTMLKIWNL--NKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQ  654 (788)
Q Consensus       577 D~lf~dp~~d~~~lLki~n~--~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~  654 (788)
                         +.    ++  -+.||..  ..+.-+|++||.+...               .+++  +..+++...         +  
T Consensus       351 ---~~----~~--~~~vw~~~l~~g~~~val~N~~~~~---------------~~~~--~~~~~lgl~---------~--  393 (433)
T 3cc1_A          351 ---YR----EE--DKVAWAANGRNGEAYVALFNLHDQQ---------------KTLQ--FRLDMVGIM---------E--  393 (433)
T ss_dssp             ---EE----ET--TEEEEEEECSSSCEEEEEEECSSSC---------------EEEE--ECGGGTTCC---------S--
T ss_pred             ---Ee----cC--CcEEEEEECCCCCEEEEEEeCCCCC---------------EEEE--EEHHHcCCC---------C--
Confidence               11    12  2556654  3455689999975421               1222  333444211         2  


Q ss_pred             eEEEEEecccE-EEecCCCCcEEEEecCCcEEEEEEEee
Q 003897          655 VFAMYLQEAKK-LVLSKPYENIEISLEPFSFELITVSAV  692 (788)
Q Consensus       655 ~~~vy~~~sg~-l~~l~~~~~~~v~L~~~~~ei~t~~Pv  692 (788)
                      .|-|+.--+++ +.....+..++++|++.++.+|.+.|.
T Consensus       394 ~~~v~Dlw~~~~~g~~~~~~~~~~~v~~hg~~l~~l~~~  432 (433)
T 3cc1_A          394 TVQLFNVWDRSFLQSLAPSESFQIELKPHQSMMLKLSPD  432 (433)
T ss_dssp             CEEEEETTTTEEEEEECTTCCEEEEECTTCEEEEEEEEC
T ss_pred             ceEEEECCCCCccccccCCceEEEEECCCcEEEEEEEeC
Confidence            57788887777 434433448999999999999999885

PyMOL of 3cc1

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13	Back alignment and structure

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1	Back alignment and structure

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}	Back alignment and structure

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*	Back alignment and structure

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*	Back alignment and structure

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*	Back alignment and structure

>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*	Back alignment and structure

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}	Back alignment and structure

>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*	Back alignment and structure

>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*	Back alignment and structure

>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*	Back alignment and structure

>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*	Back alignment and structure

>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*	Back alignment and structure

>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*	Back alignment and structure

>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*	Back alignment and structure

>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}	Back alignment and structure

>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*	Back alignment and structure

>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*	Back alignment and structure

>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		788
d1zy9a2		348	c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata	1e-14
d1szna2		314	c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T	2e-14
d1uasa2		273	c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [	5e-07
d1r46a2		292	c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens)	3e-04
d1r46a2		292	c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens)	8e-04
d1ktba2		293	c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu	5e-04
d1rr7a_		94	a.4.1.14 (A:) Middle operon regulator, Mor {Bacter	0.004

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Alpha-galactosidase GalA catalytic domain
species: Thermotoga maritima [TaxId: 2336]

 Score = 73.7 bits (180), Expect = 1e-14
 Identities = 41/346 (11%), Positives = 84/346 (24%), Gaps = 68/346 (19%)

Query: 211 KTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPI 270
           K  P      GWC+W  ++L +     ++ +K   +      +  IDD ++         
Sbjct: 4   KHTP-----TGWCSWYHYFLDLTWEETLKNLKLAKNFPF--EVFQIDDAYEK-------- 48

Query: 271 DSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQ 330
                                       D++        D   +    + + +       
Sbjct: 49  -------------------------DIGDWLV----TRGDFPSVEEMAKVIAENGFIP-G 78

Query: 331 VYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPEL 390
           ++           +    P    K               +  L               E 
Sbjct: 79  IWTAPFSVSETSDVFNEHPDWVVKENGEPKMAYRNWNKKIYAL----------DLSKDE- 127

Query: 391 VDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGN 450
           V      L S L K+G    K+D +    +  E     +   +A+ K +    +      
Sbjct: 128 VLNWLFDLFSSLRKMGYRYFKIDFLFAGAVPGE-RKKNITPIQAFRKGIETIRKAV---- 182

Query: 451 GVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMG 510
           G  + +  C   +L     +   R+G D          +         + +         
Sbjct: 183 GEDSFILGCGSPLLPAVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWALRNAITRYFMHD 242

Query: 511 NFIHPDWDMFQSTHPC-------AEFHAASRAISGGPIYVSDCVGK 549
            F   D D                E ++ +  +    I  SD +  
Sbjct: 243 RFWLNDPDCLILREEKTDLTQKEKELYSYTCGVLDNMIIESDDLSL 288

PyMOL of d1zy9a2

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314	Back information, alignment and structure

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293	Back information, alignment and structure

>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage Mu [TaxId: 10677]} Length = 94	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		788
d1szna2		314	Melibiase {Trichoderma reesei [TaxId: 51453]}	100.0
d1uasa2		273	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	99.98
d1r46a2		292	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1zy9a2		348	Alpha-galactosidase GalA catalytic domain {Thermot	99.97
d1ktba2		293	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	99.96
d2f2ha4		338	Putative glucosidase YicI, domain 2 {Escherichia c	99.16
d1gcya2		357	G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase	83.37

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=4.5e-35  Score=308.92  Aligned_cols=266  Identities=14%  Similarity=0.142  Sum_probs=194.9

Q ss_pred             cccccccccccccCHHHHHHHHHHhHhCCCC---CcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC-C
Q 003897          220 FGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-F  295 (788)
Q Consensus       220 ~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an-~  295 (788)
                      ||||||++||++|||++|++.++.|++.|++   .++++||||||...++.                    +.++.++ +
T Consensus        14 ~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~--------------------~G~~~~d~~   73 (314)
T d1szna2          14 LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV--------------------DGHIAPNAT   73 (314)
T ss_dssp             EEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB--------------------TTBCCBCTT
T ss_pred             CcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCC--------------------CCCeeeCHh
Confidence            7999999999999999999999999988763   47999999999875531                    2345655 8


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccccc
Q 003897          296 KFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAV  375 (788)
Q Consensus       296 KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a~  375 (788)
                      |||             +|||+++++||++ | +| +|+|+++.++|+.-+|+....+ ....                  
T Consensus        74 kFP-------------~Gl~~~~~~i~~~-G-~k-~Giw~~p~~~~~~~~p~~~~~~-~~~~------------------  118 (314)
T d1szna2          74 RFP-------------DGIDGLAKKVHAL-G-LK-LGIYSTAGTATCAGYPASLGYE-DVDA------------------  118 (314)
T ss_dssp             TCT-------------THHHHHHHHHHHT-T-CE-EEEEEESSSBCTTSCBCCTTCH-HHHH------------------
T ss_pred             hcC-------------CchHHHHHHHHhc-C-Ce-EEEeecccccccCCCccccccc-ccch------------------
Confidence            899             7999999999998 8 98 7999999988887777652111 1000                  


Q ss_pred             cceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhc------ccCCcchhHHHHHHHHHHHHHhccCC
Q 003897          376 DKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCE------NYGGRVDLAKAYYKALTASVRKHFKG  449 (788)
Q Consensus       376 ~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~------~~ggr~~l~~ay~~AL~~S~~~~F~g  449 (788)
                      ......|+++..| +++.+++.++..++++|||++|+|.+........      .+..........+.++.+++.+.+++
T Consensus       119 ~~~~~~~~d~~~~-d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  197 (314)
T d1szna2         119 ADFADWGVDYLKY-DNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHE  197 (314)
T ss_dssp             HHHHHTTCCEEEE-ECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSC
T ss_pred             hhhhhcCCccccc-hHHHHHHHHHHHHHHhCCceEEecccccchhccCcccCccccCcchhhHHHHHHHHHHHHHHhCCC
Confidence            0001122333332 3456777777888999999999998765443221      11111222334555777788888777


Q ss_pred             CceeeecCCCcccc-ccccccccccccccccccCCCCCCCCCCccccchhHHHhhhhhhcccCCccCCcccccccCc---
Q 003897          450 NGVIASMEHCNDFM-LLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHP---  525 (788)
Q Consensus       450 ~~iI~CMs~~~~~~-~~~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~~~a~Nsl~~g~~~~PDwDMF~S~h~---  525 (788)
                      ..+..||++..... +.....+++ |+|+|+++.+.        ..+ -|+..+++++.+.+...|||+||++..+.   
T Consensus       198 ~~i~~c~~~~~~~~~~~~~~~~~~-R~s~D~~~~w~--------~~~-~~~~~~~~~~~~~~~~~~~DpDml~~g~~~lt  267 (314)
T d1szna2         198 IVLSMCIWGQADVFSWGNSTGISW-RMSDDISPNWG--------SVT-RILNLNSFKLNSVDFWGHNDADMLEVGNGNLT  267 (314)
T ss_dssp             CEEEECCTTGGGHHHHGGGTCSEE-ECSSCCCSSHH--------HHH-HHHHHHHTCGGGCBTTBEEECCSCCTTCTTCC
T ss_pred             eEEEecCCCCCCchhhhhhcccce-eecCCcccccc--------hHH-HHHHHHHHHHHHhcCCccCCchhcccCCCCCC
Confidence            77888998875533 444566777 99999999855        333 36778889999999999999999987543   


Q ss_pred             --chHHHHHHHHHcCCCeEEeeCCCCCC
Q 003897          526 --CAEFHAASRAISGGPIYVSDCVGKHN  551 (788)
Q Consensus       526 --~a~~HAaaRaisGgPVyvSD~pg~hd  551 (788)
                        +.++|++++|++|+|++|||.+.+.+
T Consensus       268 ~~e~r~~~sl~a~~~~pl~~g~dl~~~~  295 (314)
T d1szna2         268 AAETRTHFALWAAMKSPLLIGTDLAQLS  295 (314)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECSCGGGCC
T ss_pred             HHHHHHHHHHHHHHhCchhccCCcccCC
Confidence              45899999999999999998876555

PyMOL of d1szna2

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}	Back information, alignment and structure